BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2590996.2.1
(1086 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AP003872.3| Oryza sativa (japonica cultivar-group) geno... 452 e-124
dbj|AP004636.3| Oryza sativa (japonica cultivar-group) geno... 452 e-124
ref|XM_482293.1| Oryza sativa (japonica cultivar-group), mRNA 452 e-124
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 452 e-124
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 452 e-124
emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromoso... 391 e-106
ref|XM_471830.1| Oryza sativa (japonica cultivar-group), p... 391 e-106
ref|NT_107196.1| Oryza sativa (japonica cultivar-group) 391 e-106
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 391 e-106
gb|AACV01018433.1| Oryza sativa (japonica cultivar-group) c... 355 3e-095
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 355 3e-095
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 355 3e-095
gb|CB675196.1|CB675196 OSJNEe10M08.r OSJNEe Oryza sativa (j... 214 8e-053
dbj|AK105783.1| Oryza sativa (japonica cultivar-group) cDNA... 214 8e-053
dbj|AK105966.1| Oryza sativa (japonica cultivar-group) cDNA... 214 8e-053
dbj|AK119530.1| Oryza sativa (japonica cultivar-group) cDNA... 214 8e-053
gb|AACV01009347.1| Oryza sativa (japonica cultivar-group) c... 214 8e-053
ref|XM_471827.1| Oryza sativa (japonica cultivar-group), p... 214 8e-053
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 214 8e-053
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 214 8e-053
emb|AL606443.3|OSJN00008 Oryza sativa genomic DNA, chromoso... 214 8e-053
dbj|AK061024.1| Oryza sativa (japonica cultivar-group) cDNA... 143 2e-031
dbj|AK068176.1| Oryza sativa (japonica cultivar-group) cDNA... 143 2e-031
gb|AACV01009869.1| Oryza sativa (japonica cultivar-group) c... 143 2e-031
ref|XM_472671.1| Oryza sativa (japonica cultivar-group), p... 143 2e-031
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 143 2e-031
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 143 2e-031
emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromoso... 143 2e-031
dbj|AK106366.1| Oryza sativa (japonica cultivar-group) cDNA... 137 1e-029
gb|AACV01009281.1| Oryza sativa (japonica cultivar-group) c... 137 1e-029
gb|AACV01009340.1| Oryza sativa (japonica cultivar-group) c... 137 1e-029
ref|XM_471795.1| Oryza sativa (japonica cultivar-group), p... 137 1e-029
ref|XM_471823.1| Oryza sativa (japonica cultivar-group), p... 137 1e-029
ref|XM_471848.1| Oryza sativa (japonica cultivar-group), p... 137 1e-029
ref|XM_471859.1| Oryza sativa (japonica cultivar-group), p... 137 1e-029
ref|NT_079856.2| Oryza sativa (japonica cultivar-group) 137 1e-029
emb|AL662986.3|OSJN00187 Oryza sativa genomic DNA, chromoso... 137 1e-029
emb|AL663022.4|OSJN00222 Oryza sativa genomic DNA, chromoso... 137 1e-029
emb|AL731634.4|OSJN00276 Oryza sativa genomic DNA, chromoso... 137 1e-029
gb|CB656161.1|CB656161 OSJNEc10C23.r OSJNEc Oryza sativa (j... 135 6e-029
gb|AQ689190.1|AQ689190 nbxb0079G15r CUGI Rice BAC Library O... 129 3e-027
ref|XM_471822.1| Oryza sativa (japonica cultivar-group), p... 129 3e-027
gb|AQ159266.1|AQ159266 nbxb0013E02r CUGI Rice BAC Library O... 121 8e-025
gb|AQ274007.1|AQ274007 nbxb0032I07f CUGI Rice BAC Library O... 121 8e-025
gb|AQ577711.1|AQ577711 nbxb0091F07r CUGI Rice BAC Library O... 121 8e-025
gb|AACV01009341.1| Oryza sativa (japonica cultivar-group) c... 121 8e-025
gb|AACV01009342.1| Oryza sativa (japonica cultivar-group) c... 121 8e-025
ref|XM_471860.1| Oryza sativa (japonica cultivar-group), p... 121 8e-025
dbj|AK105275.1| Oryza sativa (japonica cultivar-group) cDNA... 119 3e-024
dbj|AP006070.2| Oryza sativa (japonica cultivar-group) geno... 119 3e-024
gb|AACV01004764.1| Oryza sativa (japonica cultivar-group) c... 119 3e-024
ref|XM_466413.1| Oryza sativa (japonica cultivar-group), mRNA 119 3e-024
dbj|AP006161.3| Oryza sativa (japonica cultivar-group) geno... 119 3e-024
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 119 3e-024
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 119 3e-024
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 119 3e-024
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 119 3e-024
gb|AQ861812.1|AQ861812 nbeb0017J05r CUGI Rice BAC Library (... 117 1e-023
gb|AQ913482.1|AQ913482 nbeb0041B12r CUGI Rice BAC Library (... 117 1e-023
dbj|AK064105.1| Oryza sativa (japonica cultivar-group) cDNA... 117 1e-023
dbj|AK106639.1| Oryza sativa (japonica cultivar-group) cDNA... 117 1e-023
dbj|AP005012.3| Oryza sativa (japonica cultivar-group) geno... 117 1e-023
gb|AACV01005441.1| Oryza sativa (japonica cultivar-group) c... 117 1e-023
ref|XM_467865.1| Oryza sativa (japonica cultivar-group), mRNA 117 1e-023
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 117 1e-023
ref|XM_506981.1| PREDICTED Oryza sativa (japonica cultivar-... 117 1e-023
dbj|AK073587.1| Oryza sativa (japonica cultivar-group) cDNA... 113 2e-022
dbj|AK104985.1| Oryza sativa (japonica cultivar-group) cDNA... 113 2e-022
gb|AACV01005446.1| Oryza sativa (japonica cultivar-group) c... 113 2e-022
ref|XM_467869.1| Oryza sativa (japonica cultivar-group), mRNA 113 2e-022
ref|XM_506982.1| PREDICTED Oryza sativa (japonica cultivar-... 113 2e-022
gb|AZ130075.1|AZ130075 OSJNBb0102P10r CUGI Rice BAC Library... 109 3e-021
gb|CB648866.1|CB648866 OSJNEb12H17.r OSJNEb Oryza sativa (j... 103 2e-019
dbj|AK064085.1| Oryza sativa (japonica cultivar-group) cDNA... 98 1e-017
gb|AACV01004763.1| Oryza sativa (japonica cultivar-group) c... 98 1e-017
ref|XM_466409.1| Oryza sativa (japonica cultivar-group), mRNA 98 1e-017
ref|XM_466410.1| Oryza sativa (japonica cultivar-group), mRNA 98 1e-017
gb|AACV01004762.1| Oryza sativa (japonica cultivar-group) c... 96 5e-017
ref|XM_466406.1| Oryza sativa (japonica cultivar-group), mRNA 96 5e-017
gb|AACV01009276.1| Oryza sativa (japonica cultivar-group) c... 90 3e-015
ref|XM_471850.1| Oryza sativa (japonica cultivar-group), p... 90 3e-015
dbj|AK066301.1| Oryza sativa (japonica cultivar-group) cDNA... 86 5e-014
ref|XM_467864.1| Oryza sativa (japonica cultivar-group), mRNA 86 5e-014
ref|XM_471794.1| Oryza sativa (japonica cultivar-group), p... 82 7e-013
gb|CB675195.1|CB675195 OSJNEe10M08.f OSJNEe Oryza sativa (j... 74 2e-010
gb|CB656160.1|CB656160 OSJNEc10C23.f OSJNEc Oryza sativa (j... 72 7e-010
dbj|AP003744.1| Oryza sativa (japonica cultivar-group) chro... 64 2e-007
dbj|AK108114.1| Oryza sativa (japonica cultivar-group) cDNA... 64 2e-007
dbj|AP004341.2| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
gb|AACV01016816.1| Oryza sativa (japonica cultivar-group) c... 64 2e-007
ref|XM_479187.1| Oryza sativa (japonica cultivar-group), mRNA 64 2e-007
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 64 2e-007
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 64 2e-007
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 64 2e-007
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
gb|AQ843589.1|AQ843589 nbxb0024I17f CUGI Rice BAC Library O... 56 4e-005
dbj|AK072018.1| Oryza sativa (japonica cultivar-group) cDNA... 56 4e-005
dbj|AK106006.1| Oryza sativa (japonica cultivar-group) cDNA... 56 4e-005
dbj|AP005515.3| Oryza sativa (japonica cultivar-group) geno... 56 4e-005
gb|AACV01016235.1| Oryza sativa (japonica cultivar-group) c... 56 4e-005
gb|AACV01016252.1| Oryza sativa (japonica cultivar-group) c... 56 4e-005
ref|XM_478130.1| Oryza sativa (japonica cultivar-group), mRNA 56 4e-005
ref|XM_478140.1| Oryza sativa (japonica cultivar-group), mRNA 56 4e-005
ref|XM_478166.1| Oryza sativa (japonica cultivar-group), mRNA 56 4e-005
ref|XM_506345.1| PREDICTED Oryza sativa (japonica cultivar-... 56 4e-005
dbj|AP005190.3| Oryza sativa (japonica cultivar-group) geno... 56 4e-005
dbj|AP004348.4| Oryza sativa (japonica cultivar-group) geno... 56 4e-005
dbj|AP004400.1| Oryza sativa (japonica cultivar-group) chro... 52 6e-004
dbj|AK059016.1| Oryza sativa (japonica cultivar-group) cDNA... 52 6e-004
dbj|AK067710.1| Oryza sativa (japonica cultivar-group) cDNA... 52 6e-004
dbj|AP005186.4| Oryza sativa (japonica cultivar-group) geno... 52 6e-004
ref|NT_107236.1| Oryza sativa (japonica cultivar-group) 52 6e-004
gb|AACV01016311.1| Oryza sativa (japonica cultivar-group) c... 52 6e-004
gb|AACV01016313.1| Oryza sativa (japonica cultivar-group) c... 52 6e-004
dbj|AP006050.3| Oryza sativa (japonica cultivar-group) geno... 52 6e-004
ref|XM_478273.1| Oryza sativa (japonica cultivar-group), mRNA 52 6e-004
ref|XM_478280.1| Oryza sativa (japonica cultivar-group), mRNA 52 6e-004
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 52 6e-004
gb|AU078176.1|AU078176 AU078176 Rice callus Oryza sativa (j... 50 0.003
gb|CB653386.1|CB653386 OSJNEc04F22.r OSJNEc Oryza sativa (j... 50 0.003
dbj|AK063325.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK064151.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK071953.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK099055.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK101659.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK102671.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK103824.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK109007.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK109711.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AP005178.3| Oryza sativa (japonica cultivar-group) geno... 50 0.003
dbj|AP004382.2| Oryza sativa (japonica cultivar-group) geno... 50 0.003
gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbar... 50 0.003
dbj|AP004864.3| Oryza sativa (japonica cultivar-group) geno... 50 0.003
gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 ... 50 0.003
gb|AC109596.3| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|AC108499.3| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
dbj|AP003504.1| Oryza sativa (japonica cultivar-group) geno... 50 0.003
gb|AACV01001755.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01001928.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01004348.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01006675.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01008244.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01012608.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01015538.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01015581.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
dbj|AP003607.3| Oryza sativa (japonica cultivar-group) geno... 50 0.003
dbj|AP004367.4| Oryza sativa (japonica cultivar-group) geno... 50 0.003
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 50 0.003
ref|NM_186853.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.003
ref|NM_192244.1| Oryza sativa (japonica cultivar-group), p... 50 0.003
ref|XM_463383.1| Oryza sativa (japonica cultivar-group), p... 50 0.003
ref|XM_465758.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.003
ref|XM_477223.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.003
ref|NT_079854.2| Oryza sativa (japonica cultivar-group) 50 0.003
ref|NT_079914.2| Oryza sativa (japonica cultivar-group) 50 0.003
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 50 0.003
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 50 0.003
ref|NT_107179.1| Oryza sativa (japonica cultivar-group) 50 0.003
ref|NT_107218.1| Oryza sativa (japonica cultivar-group) 50 0.003
ref|XM_506805.1| PREDICTED Oryza sativa (japonica cultivar-... 50 0.003
dbj|AP005183.3| Oryza sativa (japonica cultivar-group) geno... 50 0.003
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 50 0.003
gb|CH401221.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 50 0.003
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 50 0.003
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 50 0.003
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CB641583.1|CB641583 OSJNEb01E21.r OSJNEb Oryza sativa (j... 48 0.010
gb|CB647590.1|CB647590 OSJNEb10J08.r OSJNEb Oryza sativa (j... 48 0.010
gb|CD670635.1|CD670635 OsMR050 5MT resistant rice mutant cD... 48 0.010
dbj|AK060228.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.010
dbj|AK068586.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.010
dbj|AK105478.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.010
dbj|AK107156.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.010
dbj|AK108695.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.010
dbj|AK120020.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.010
dbj|AP004557.3| Oryza sativa (japonica cultivar-group) geno... 48 0.010
dbj|AP004045.3| Oryza sativa (japonica cultivar-group) geno... 48 0.010
dbj|AP005008.3| Oryza sativa (japonica cultivar-group) geno... 48 0.010
dbj|AP004620.3| Oryza sativa (japonica cultivar-group) geno... 48 0.010
dbj|AP002843.2| Oryza sativa (japonica cultivar-group) geno... 48 0.010
gb|AACV01000295.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01001757.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01001845.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01002303.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01003571.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01016231.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01016244.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01016246.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01016249.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01016342.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01018758.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
dbj|AP002524.2| Oryza sativa (japonica cultivar-group) geno... 48 0.010
ref|NM_189539.1| Oryza sativa (japonica cultivar-group), p... 48 0.010
ref|NM_191567.1| Oryza sativa (japonica cultivar-group), p... 48 0.010
ref|NM_192834.1| Oryza sativa (japonica cultivar-group), p... 48 0.010
ref|XM_464540.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.010
ref|XM_478126.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.010
ref|XM_478152.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.010
ref|XM_478153.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.010
ref|XM_478159.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.010
ref|XM_478348.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.010
ref|XM_478349.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.010
ref|XM_483075.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.010
ref|NT_107177.1| Oryza sativa (japonica cultivar-group) 48 0.010
ref|XM_550389.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.010
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 48 0.010
dbj|AP005185.4| Oryza sativa (japonica cultivar-group) geno... 48 0.010
dbj|AP003560.2| Oryza sativa (japonica cultivar-group) geno... 48 0.010
dbj|AP003328.3| Oryza sativa (japonica cultivar-group) geno... 48 0.010
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.010
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.010
gb|CZ558104.1|CZ558104 M0037546 AS_TRIM_TDNA_B1 Oryza sativ... 46 0.040
gb|CB637626.1|CB637626 OSJNEa04J02.r OSJNEa Oryza sativa (j... 46 0.040
gb|CB646078.1|CB646078 OSJNEb08E05.r OSJNEb Oryza sativa (j... 46 0.040
gb|CB646298.1|CB646298 OSJNEb08K19.f OSJNEb Oryza sativa (j... 46 0.040
gb|CB654109.1|CB654109 OSJNEc05M06.r OSJNEc Oryza sativa (j... 46 0.040
gb|CB655822.1|CB655822 OSJNEc09J11.f OSJNEc Oryza sativa (j... 46 0.040
gb|CB655823.1|CB655823 OSJNEc09J11.r OSJNEc Oryza sativa (j... 46 0.040
gb|CB666716.1|CB666716 OSJNEd13L14.r OSJNEd Oryza sativa (j... 46 0.040
gb|CB671618.1|CB671618 OSJNEe05E12.r OSJNEe Oryza sativa (j... 46 0.040
gb|CB679495.1|CB679495 OSJNEf03B04.r OSJNEf Oryza sativa (j... 46 0.040
gb|CB679818.1|CB679818 OSJNEf03M17.r OSJNEf Oryza sativa (j... 46 0.040
gb|CB680688.1|CB680688 OSJNEf05N23.f OSJNEf Oryza sativa (j... 46 0.040
gb|CB680689.1|CB680689 OSJNEf05N23.r OSJNEf Oryza sativa (j... 46 0.040
gb|CB683695.1|CB683695 OSJNEf12G22.f OSJNEf Oryza sativa (j... 46 0.040
gb|AF527714.1|AF527714 AF527714 Oryza sativa (japonica cult... 46 0.040
emb|AL606617.1|OSJN00037 Oryza sativa (japonica cultivar-gr... 46 0.040
dbj|AP004686.1| Oryza sativa (japonica cultivar-group) chro... 46 0.040
dbj|AK059022.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.040
dbj|AK068878.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.040
dbj|AK100744.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.040
dbj|AK105563.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.040
gb|AC118347.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.040
gb|AC136842.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.040
dbj|AP005613.2| Oryza sativa (japonica cultivar-group) geno... 46 0.040
dbj|AP005004.3| Oryza sativa (japonica cultivar-group) geno... 46 0.040
dbj|AP005744.2| Oryza sativa (japonica cultivar-group) geno... 46 0.040
ref|NT_107132.1| Oryza sativa (japonica cultivar-group) 46 0.040
gb|AACV01003715.1| Oryza sativa (japonica cultivar-group) c... 46 0.040
gb|AACV01003718.1| Oryza sativa (japonica cultivar-group) c... 46 0.040
gb|AACV01005042.1| Oryza sativa (japonica cultivar-group) c... 46 0.040
gb|AACV01019075.1| Oryza sativa (japonica cultivar-group) c... 46 0.040
gb|AACV01023525.1| Oryza sativa (japonica cultivar-group) c... 46 0.040
gb|AACV01028627.1| Oryza sativa (japonica cultivar-group) C... 46 0.040
ref|XM_450076.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.040
ref|NT_107076.1| Oryza sativa (japonica cultivar-group) 46 0.040
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 46 0.040
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.040
gb|CH401232.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.040
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.040
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.040
gb|AC158405.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.040
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 46 0.040
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 46 0.040
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.040
gb|CB643291.1|CB643291 OSJNEb03O11.f OSJNEb Oryza sativa (j... 44 0.16
gb|CB643653.1|CB643653 OSJNEb04H10.r OSJNEb Oryza sativa (j... 44 0.16
gb|CB643719.1|CB643719 OSJNEb04J03.r OSJNEb Oryza sativa (j... 44 0.16
gb|CB643721.1|CB643721 OSJNEb04J04.r OSJNEb Oryza sativa (j... 44 0.16
gb|CB645026.1|CB645026 OSJNEb06H20.r OSJNEb Oryza sativa (j... 44 0.16
gb|CB650859.1|CB650859 OSJNEb15I22.r OSJNEb Oryza sativa (j... 44 0.16
gb|CB651523.1|CB651523 OSJNEb16I07.r OSJNEb Oryza sativa (j... 44 0.16
gb|CB657828.1|CB657828 OSJNEc13H06.f OSJNEc Oryza sativa (j... 44 0.16
gb|CB657829.1|CB657829 OSJNEc13H06.r OSJNEc Oryza sativa (j... 44 0.16
gb|CB659047.1|CB659047 OSJNEc15K11.f OSJNEc Oryza sativa (j... 44 0.16
gb|CB661740.1|CB661740 OSJNEd05A15.r OSJNEd Oryza sativa (j... 44 0.16
gb|CB668004.1|CB668004 OSJNEd15K03.r OSJNEd Oryza sativa (j... 44 0.16
gb|CB668190.1|CB668190 OSJNEd15O18.r OSJNEd Oryza sativa (j... 44 0.16
gb|CB677705.1|CB677705 OSJNEe14P10.r OSJNEe Oryza sativa (j... 44 0.16
gb|CB680895.1|CB680895 OSJNEf06G17.r OSJNEf Oryza sativa (j... 44 0.16
dbj|AP003941.1| Oryza sativa (japonica cultivar-group) chro... 44 0.16
dbj|AP004327.1| Oryza sativa (japonica cultivar-group) chro... 44 0.16
dbj|AK060513.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.16
dbj|AK062283.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.16
dbj|AK065112.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.16
dbj|AK065987.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.16
dbj|AK100519.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.16
dbj|AK100689.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.16
dbj|AK105261.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.16
dbj|AK105912.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.16
dbj|AK108846.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.16
dbj|AK119544.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.16
dbj|AP003754.5| Oryza sativa (japonica cultivar-group) geno... 44 0.16
dbj|AP004340.5| Oryza sativa (japonica cultivar-group) geno... 44 0.16
ref|NT_107075.1| Oryza sativa (japonica cultivar-group) 44 0.16
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 44 0.16
gb|AACV01001848.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
gb|AACV01002304.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
gb|AACV01014458.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
gb|AACV01015535.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
gb|AACV01015542.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
gb|AACV01016314.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
gb|AACV01018756.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
gb|AACV01020390.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
ref|NM_186788.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.16
ref|NM_191572.1| Oryza sativa (japonica cultivar-group), p... 44 0.16
ref|NM_192093.1| Oryza sativa (japonica cultivar-group), p... 44 0.16
ref|NM_192840.1| Oryza sativa (japonica cultivar-group), p... 44 0.16
ref|XM_478285.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.16
ref|XM_478346.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.16
ref|XM_483068.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.16
ref|XM_506362.1| PREDICTED Oryza sativa (japonica cultivar-... 44 0.16
dbj|AP003617.3| Oryza sativa (japonica cultivar-group) geno... 44 0.16
dbj|AP006173.3| Oryza sativa (japonica cultivar-group) geno... 44 0.16
dbj|AP003455.2| Oryza sativa (japonica cultivar-group) geno... 44 0.16
dbj|AP003452.3| Oryza sativa (japonica cultivar-group) geno... 44 0.16
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
>dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1118_A03
Length = 109873
Score = 452 bits (228), Expect = e-124
Identities = 584/702 (83%), Gaps = 3/702 (0%)
Strand = Plus / Minus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 60608 acggcgctctccctgagctcggccacgcgccgccgcatctccctccccttctccccatcc 60549
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 60548 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 60489
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| ||||||||||||||||||||||||||||| |||
Sbjct: 60488 ccgatcccccactccgtgcgcttgtaccggcagttggtctgctgctcggcgaagaacggc 60429
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 60428 cagcacaccatcggcacgccgccgacgatgctctccagcgtcgagttccacccggagtgg 60369
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 60368 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 60309
Query: 619 agcatgcttcgtccctctgtcgcagctgagaactctggcggcagcccggcggagtcgcca 678
|||||||| | || | ||||| || | |||||| ||||||||| |||||| ||| ||
Sbjct: 60308 agcatgctcctctcccccgtcgccgccgcgaactccggcggcagcgcggcggcgtcccc- 60250
Query: 679 ctcttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcccc 738
||| |||||||| ||||| |||||||| ||||| ||||||| || ||| ||||||
Sbjct: 60249 --cttcacgaggtcggggcgcacgttccacaggaacgcgtagccgctgccggcgagcccc 60192
Query: 739 cacgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatac 798
||||||||||| | ||| |||||| ||||||||||||||||||||||||||||| |||
Sbjct: 60191 cacgcgaactccagcaggtgctcggccgacatcaccgtgatgctcccgaagttgacgtac 60132
Query: 799 acaacggagcgcggcgcacggccgttgagccaccggagcggcgcctcctgctccttccac 858
|| ||||||||||||| ||||||| ||||||||||||| | | ||||||||||||||
Sbjct: 60131 acgacggagcgcggcggccggccgtccagccaccggagcgcctcgccctgctccttccac 60072
Query: 859 aggttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtcagc 918
||||||||||| | | ||||| || |||| |||| ||| |||||||||| |||||||
Sbjct: 60071 aggttggacccgacgccggcgacggggctgtccgccggcaggttgttccgcgccgtcagg 60012
Query: 919 tggagcgggcccacggtgtagatgggcggcaggagcttcgccatggcagcgagcagcgtc 978
||||||||||| ||||||||||| ||||| || ||| | |||||| | | ||||| |
Sbjct: 60011 tggagcgggccgacggtgtagatcggcgggagcagcgcggacatggcgaccatcagcggc 59952
Query: 979 gcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcc 1020
||||||||||||||||||||||||| || |||||||||||||
Sbjct: 59951 gcgtcgagctcgtcgaaggtgttgaggatcaccgccgacgcc 59910
>dbj|AP004636.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0685B10
Length = 148544
Score = 452 bits (228), Expect = e-124
Identities = 584/702 (83%), Gaps = 3/702 (0%)
Strand = Plus / Minus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 17038 acggcgctctccctgagctcggccacgcgccgccgcatctccctccccttctccccatcc 16979
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 16978 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 16919
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| ||||||||||||||||||||||||||||| |||
Sbjct: 16918 ccgatcccccactccgtgcgcttgtaccggcagttggtctgctgctcggcgaagaacggc 16859
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 16858 cagcacaccatcggcacgccgccgacgatgctctccagcgtcgagttccacccggagtgg 16799
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 16798 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 16739
Query: 619 agcatgcttcgtccctctgtcgcagctgagaactctggcggcagcccggcggagtcgcca 678
|||||||| | || | ||||| || | |||||| ||||||||| |||||| ||| ||
Sbjct: 16738 agcatgctcctctcccccgtcgccgccgcgaactccggcggcagcgcggcggcgtcccc- 16680
Query: 679 ctcttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcccc 738
||| |||||||| ||||| |||||||| ||||| ||||||| || ||| ||||||
Sbjct: 16679 --cttcacgaggtcggggcgcacgttccacaggaacgcgtagccgctgccggcgagcccc 16622
Query: 739 cacgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatac 798
||||||||||| | ||| |||||| ||||||||||||||||||||||||||||| |||
Sbjct: 16621 cacgcgaactccagcaggtgctcggccgacatcaccgtgatgctcccgaagttgacgtac 16562
Query: 799 acaacggagcgcggcgcacggccgttgagccaccggagcggcgcctcctgctccttccac 858
|| ||||||||||||| ||||||| ||||||||||||| | | ||||||||||||||
Sbjct: 16561 acgacggagcgcggcggccggccgtccagccaccggagcgcctcgccctgctccttccac 16502
Query: 859 aggttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtcagc 918
||||||||||| | | ||||| || |||| |||| ||| |||||||||| |||||||
Sbjct: 16501 aggttggacccgacgccggcgacggggctgtccgccggcaggttgttccgcgccgtcagg 16442
Query: 919 tggagcgggcccacggtgtagatgggcggcaggagcttcgccatggcagcgagcagcgtc 978
||||||||||| ||||||||||| ||||| || ||| | |||||| | | ||||| |
Sbjct: 16441 tggagcgggccgacggtgtagatcggcgggagcagcgcggacatggcgaccatcagcggc 16382
Query: 979 gcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcc 1020
||||||||||||||||||||||||| || |||||||||||||
Sbjct: 16381 gcgtcgagctcgtcgaaggtgttgaggatcaccgccgacgcc 16340
>ref|XM_482293.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1494
Score = 452 bits (228), Expect = e-124
Identities = 584/702 (83%), Gaps = 3/702 (0%)
Strand = Plus / Minus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 1421 acggcgctctccctgagctcggccacgcgccgccgcatctccctccccttctccccatcc 1362
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 1361 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 1302
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| ||||||||||||||||||||||||||||| |||
Sbjct: 1301 ccgatcccccactccgtgcgcttgtaccggcagttggtctgctgctcggcgaagaacggc 1242
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 1241 cagcacaccatcggcacgccgccgacgatgctctccagcgtcgagttccacccggagtgg 1182
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 1181 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 1122
Query: 619 agcatgcttcgtccctctgtcgcagctgagaactctggcggcagcccggcggagtcgcca 678
|||||||| | || | ||||| || | |||||| ||||||||| |||||| ||| ||
Sbjct: 1121 agcatgctcctctcccccgtcgccgccgcgaactccggcggcagcgcggcggcgtcccc- 1063
Query: 679 ctcttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcccc 738
||| |||||||| ||||| |||||||| ||||| ||||||| || ||| ||||||
Sbjct: 1062 --cttcacgaggtcggggcgcacgttccacaggaacgcgtagccgctgccggcgagcccc 1005
Query: 739 cacgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatac 798
||||||||||| | ||| |||||| ||||||||||||||||||||||||||||| |||
Sbjct: 1004 cacgcgaactccagcaggtgctcggccgacatcaccgtgatgctcccgaagttgacgtac 945
Query: 799 acaacggagcgcggcgcacggccgttgagccaccggagcggcgcctcctgctccttccac 858
|| ||||||||||||| ||||||| ||||||||||||| | | ||||||||||||||
Sbjct: 944 acgacggagcgcggcggccggccgtccagccaccggagcgcctcgccctgctccttccac 885
Query: 859 aggttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtcagc 918
||||||||||| | | ||||| || |||| |||| ||| |||||||||| |||||||
Sbjct: 884 aggttggacccgacgccggcgacggggctgtccgccggcaggttgttccgcgccgtcagg 825
Query: 919 tggagcgggcccacggtgtagatgggcggcaggagcttcgccatggcagcgagcagcgtc 978
||||||||||| ||||||||||| ||||| || ||| | |||||| | | ||||| |
Sbjct: 824 tggagcgggccgacggtgtagatcggcgggagcagcgcggacatggcgaccatcagcggc 765
Query: 979 gcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcc 1020
||||||||||||||||||||||||| || |||||||||||||
Sbjct: 764 gcgtcgagctcgtcgaaggtgttgaggatcaccgccgacgcc 723
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 452 bits (228), Expect = e-124
Identities = 584/702 (83%), Gaps = 3/702 (0%)
Strand = Plus / Minus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 19049508 acggcgctctccctgagctcggccacgcgccgccgcatctccctccccttctccccatcc 19049449
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 19049448 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 19049389
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| ||||||||||||||||||||||||||||| |||
Sbjct: 19049388 ccgatcccccactccgtgcgcttgtaccggcagttggtctgctgctcggcgaagaacggc 19049329
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 19049328 cagcacaccatcggcacgccgccgacgatgctctccagcgtcgagttccacccggagtgg 19049269
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 19049268 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 19049209
Query: 619 agcatgcttcgtccctctgtcgcagctgagaactctggcggcagcccggcggagtcgcca 678
|||||||| | || | ||||| || | |||||| ||||||||| |||||| ||| ||
Sbjct: 19049208 agcatgctcctctcccccgtcgccgccgcgaactccggcggcagcgcggcggcgtcccc- 19049150
Query: 679 ctcttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcccc 738
||| |||||||| ||||| |||||||| ||||| ||||||| || ||| ||||||
Sbjct: 19049149 --cttcacgaggtcggggcgcacgttccacaggaacgcgtagccgctgccggcgagcccc 19049092
Query: 739 cacgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatac 798
||||||||||| | ||| |||||| ||||||||||||||||||||||||||||| |||
Sbjct: 19049091 cacgcgaactccagcaggtgctcggccgacatcaccgtgatgctcccgaagttgacgtac 19049032
Query: 799 acaacggagcgcggcgcacggccgttgagccaccggagcggcgcctcctgctccttccac 858
|| ||||||||||||| ||||||| ||||||||||||| | | ||||||||||||||
Sbjct: 19049031 acgacggagcgcggcggccggccgtccagccaccggagcgcctcgccctgctccttccac 19048972
Query: 859 aggttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtcagc 918
||||||||||| | | ||||| || |||| |||| ||| |||||||||| |||||||
Sbjct: 19048971 aggttggacccgacgccggcgacggggctgtccgccggcaggttgttccgcgccgtcagg 19048912
Query: 919 tggagcgggcccacggtgtagatgggcggcaggagcttcgccatggcagcgagcagcgtc 978
||||||||||| ||||||||||| ||||| || ||| | |||||| | | ||||| |
Sbjct: 19048911 tggagcgggccgacggtgtagatcggcgggagcagcgcggacatggcgaccatcagcggc 19048852
Query: 979 gcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcc 1020
||||||||||||||||||||||||| || |||||||||||||
Sbjct: 19048851 gcgtcgagctcgtcgaaggtgttgaggatcaccgccgacgcc 19048810
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 535 agcgtggagttccacccggagtgcgtcaggaacacccccacggc 578
||||| |||||||| ||| |||||||||||||| | ||||||||
Sbjct: 23922780 agcgtcgagttccagccgcagtgcgtcaggaacgcgcccacggc 23922823
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 535 agcgtggagttccacccggagtgcgtcaggaacacccccacggc 578
||||| |||||||| ||| |||||||||||||| | ||||||||
Sbjct: 23913569 agcgtcgagttccagccgcagtgcgtcaggaacgcgcccacggc 23913612
Score = 44.1 bits (22), Expect = 0.16
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 541 gagttccacccggagtgcgtcaggaacacccccacggc 578
|||||||| ||| |||||||||||||| |||||||||
Sbjct: 23899054 gagttccagccgcagtgcgtcaggaaccaccccacggc 23899017
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 452 bits (228), Expect = e-124
Identities = 584/702 (83%), Gaps = 3/702 (0%)
Strand = Plus / Minus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 19287595 acggcgctctccctgagctcggccacgcgccgccgcatctccctccccttctccccatcc 19287536
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 19287535 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 19287476
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| ||||||||||||||||||||||||||||| |||
Sbjct: 19287475 ccgatcccccactccgtgcgcttgtaccggcagttggtctgctgctcggcgaagaacggc 19287416
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 19287415 cagcacaccatcggcacgccgccgacgatgctctccagcgtcgagttccacccggagtgg 19287356
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 19287355 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 19287296
Query: 619 agcatgcttcgtccctctgtcgcagctgagaactctggcggcagcccggcggagtcgcca 678
|||||||| | || | ||||| || | |||||| ||||||||| |||||| ||| ||
Sbjct: 19287295 agcatgctcctctcccccgtcgccgccgcgaactccggcggcagcgcggcggcgtcccc- 19287237
Query: 679 ctcttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcccc 738
||| |||||||| ||||| |||||||| ||||| ||||||| || ||| ||||||
Sbjct: 19287236 --cttcacgaggtcggggcgcacgttccacaggaacgcgtagccgctgccggcgagcccc 19287179
Query: 739 cacgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatac 798
||||||||||| | ||| |||||| ||||||||||||||||||||||||||||| |||
Sbjct: 19287178 cacgcgaactccagcaggtgctcggccgacatcaccgtgatgctcccgaagttgacgtac 19287119
Query: 799 acaacggagcgcggcgcacggccgttgagccaccggagcggcgcctcctgctccttccac 858
|| ||||||||||||| ||||||| ||||||||||||| | | ||||||||||||||
Sbjct: 19287118 acgacggagcgcggcggccggccgtccagccaccggagcgcctcgccctgctccttccac 19287059
Query: 859 aggttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtcagc 918
||||||||||| | | ||||| || |||| |||| ||| |||||||||| |||||||
Sbjct: 19287058 aggttggacccgacgccggcgacggggctgtccgccggcaggttgttccgcgccgtcagg 19286999
Query: 919 tggagcgggcccacggtgtagatgggcggcaggagcttcgccatggcagcgagcagcgtc 978
||||||||||| ||||||||||| ||||| || ||| | |||||| | | ||||| |
Sbjct: 19286998 tggagcgggccgacggtgtagatcggcgggagcagcgcggacatggcgaccatcagcggc 19286939
Query: 979 gcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcc 1020
||||||||||||||||||||||||| || |||||||||||||
Sbjct: 19286938 gcgtcgagctcgtcgaaggtgttgaggatcaccgccgacgcc 19286897
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 535 agcgtggagttccacccggagtgcgtcaggaacacccccacggc 578
||||| |||||||| ||| |||||||||||||| | ||||||||
Sbjct: 24160867 agcgtcgagttccagccgcagtgcgtcaggaacgcgcccacggc 24160910
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 535 agcgtggagttccacccggagtgcgtcaggaacacccccacggc 578
||||| |||||||| ||| |||||||||||||| | ||||||||
Sbjct: 24151656 agcgtcgagttccagccgcagtgcgtcaggaacgcgcccacggc 24151699
Score = 44.1 bits (22), Expect = 0.16
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 541 gagttccacccggagtgcgtcaggaacacccccacggc 578
|||||||| ||| |||||||||||||| |||||||||
Sbjct: 24137141 gagttccagccgcagtgcgtcaggaaccaccccacggc 24137104
>emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M06,
complete sequence
Length = 107014
Score = 391 bits (197), Expect = e-106
Identities = 582/711 (81%), Gaps = 12/711 (1%)
Strand = Plus / Minus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 86281 acggcgctctccctgagctcggccacgcgccgccgcatctccctccccttctccccatcc 86222
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 86221 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 86162
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| ||||||||||||||||||||||||||||| |||
Sbjct: 86161 ccgatcccccactccgtgcgcttgtaccggcagttggtctgctgctcggcgaagaacggc 86102
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||| ||||| || ||||||||||| |||||||||||||||||
Sbjct: 86101 cagcacaccatcggcacgtcgccgacgatgctctccagcgtcgagttccacccggagtgg 86042
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 86041 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 85982
Query: 619 agcatgcttcgtccctctgtcgcagctgagaactctggcggcagcccggcggagtcgcca 678
|||||||| | || | ||||| || | |||||| ||||||||| |||||| ||| ||
Sbjct: 85981 agcatgctcctctcccccgtcgccgccgcgaactccggcggcagcgcggcggcgtcccc- 85923
Query: 679 ctcttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcccc 738
||| |||||||| ||||| |||||||| ||||| ||||||| || ||| ||||||
Sbjct: 85922 --cttcacgaggtcggggcgcacgttccacaggaacgcgtagccgctgccggcgagcccc 85865
Query: 739 cacgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatac 798
||||||||||| | ||| |||||| ||||||||||||||||||||| |||
Sbjct: 85864 cacgcgaactccagcaggtgctcggccgacatcaccgtgatgctcccg---------tac 85814
Query: 799 acaacggagcgcggcgcacggccgttgagccaccggagcggcgcctcctgctccttccac 858
|| ||||||||||||| ||||||| ||||||||||||| | | ||||||||||||||
Sbjct: 85813 acgacggagcgcggcggccggccgtccagccaccggagcgcctcgccctgctccttccac 85754
Query: 859 aggttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtcagc 918
||||||||||| | | ||||| || |||| |||| ||| ||||||||| |||||||
Sbjct: 85753 aggttggacccgacgccggcgacggggctgtccgccggcagattgttccgcgccgtcagg 85694
Query: 919 tggagcgggcccacggtgtagatgggcggcaggagcttcgccatggcagcgagcagcgtc 978
||||||||||| ||||||||||| ||||| || ||| | |||||| || | ||||| |
Sbjct: 85693 tggagcgggccgacggtgtagatcggcgggagcagcgcggacatggcggccatcagcggc 85634
Query: 979 gcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcctgcgacatg 1029
||||||||||||||||||||||||| || ||||||||||||| ||| ||||
Sbjct: 85633 gcgtcgagctcgtcgaaggtgttgaggatcaccgccgacgccagcggcatg 85583
Score = 214 bits (108), Expect = 8e-053
Identities = 258/308 (83%)
Strand = Plus / Plus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 39659 acggcgctctccctgagctccgccacgcgccgccgcatctccctccccttctccccgtcc 39718
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 39719 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 39778
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| | ||||||||||||||||||||||||||| |||
Sbjct: 39779 ccgatcccccactccgtgcgcttgtacctgcagttggtctgctgctcggcgaagaacggc 39838
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||||||||| || ||||||||||| |||||||| ||||||||
Sbjct: 39839 cagcacaccatcggcacgccgccggcgatgctctccagcgtcgagttccagccggagtgg 39898
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 39899 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 39958
Query: 619 agcatgct 626
||||||||
Sbjct: 39959 agcatgct 39966
Score = 204 bits (103), Expect = 7e-050
Identities = 226/267 (84%)
Strand = Plus / Plus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| | |||||| ||||| ||||||| || ||| ||||||||
Sbjct: 40027 cttgacgaggtcggggcgcaagttccacaggaacgcgtagccgctgccggcgagccccca 40086
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 40087 cgcgaactccgccaggtgctcggccgacatcaccgtgatgctcccgaagttgacgtacac 40146
Query: 801 aacggagcgcggcgcacggccgttgagccaccggagcggcgcctcctgctccttccacag 860
||||||||||||| ||||||| ||||||||||||| | | ||||||||||||||||
Sbjct: 40147 cacggagcgcggcggccggccgtccagccaccggagcgcctcgccctgctccttccacag 40206
Query: 861 gttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtcagctg 920
||||||||| | | | ||||| || |||| |||| |||||||| ||||| ||| ||| ||
Sbjct: 40207 gttggacccgacaccggcgacggggctgtccgccggcacgttgctccgcgccgccaggtg 40266
Query: 921 gagcgggcccacggtgtagatgggcgg 947
||||||||| ||||||||||| |||||
Sbjct: 40267 gagcgggccgacggtgtagatcggcgg 40293
Score = 73.8 bits (37), Expect = 2e-010
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 978 cgcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcctgcgacatgc 1030
||||||||||||||||||||||||||||| ||||||| |||| |||||||||
Sbjct: 40333 cgcgtcgagctcgtcgaaggtgttgatgatcaccgcctccgccagcgacatgc 40385
>ref|XM_471830.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1428
Score = 391 bits (197), Expect = e-106
Identities = 582/711 (81%), Gaps = 12/711 (1%)
Strand = Plus / Minus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 1355 acggcgctctccctgagctcggccacgcgccgccgcatctccctccccttctccccatcc 1296
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 1295 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 1236
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| ||||||||||||||||||||||||||||| |||
Sbjct: 1235 ccgatcccccactccgtgcgcttgtaccggcagttggtctgctgctcggcgaagaacggc 1176
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||| ||||| || ||||||||||| |||||||||||||||||
Sbjct: 1175 cagcacaccatcggcacgtcgccgacgatgctctccagcgtcgagttccacccggagtgg 1116
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 1115 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 1056
Query: 619 agcatgcttcgtccctctgtcgcagctgagaactctggcggcagcccggcggagtcgcca 678
|||||||| | || | ||||| || | |||||| ||||||||| |||||| ||| ||
Sbjct: 1055 agcatgctcctctcccccgtcgccgccgcgaactccggcggcagcgcggcggcgtcccc- 997
Query: 679 ctcttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcccc 738
||| |||||||| ||||| |||||||| ||||| ||||||| || ||| ||||||
Sbjct: 996 --cttcacgaggtcggggcgcacgttccacaggaacgcgtagccgctgccggcgagcccc 939
Query: 739 cacgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatac 798
||||||||||| | ||| |||||| ||||||||||||||||||||| |||
Sbjct: 938 cacgcgaactccagcaggtgctcggccgacatcaccgtgatgctcccg---------tac 888
Query: 799 acaacggagcgcggcgcacggccgttgagccaccggagcggcgcctcctgctccttccac 858
|| ||||||||||||| ||||||| ||||||||||||| | | ||||||||||||||
Sbjct: 887 acgacggagcgcggcggccggccgtccagccaccggagcgcctcgccctgctccttccac 828
Query: 859 aggttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtcagc 918
||||||||||| | | ||||| || |||| |||| ||| ||||||||| |||||||
Sbjct: 827 aggttggacccgacgccggcgacggggctgtccgccggcagattgttccgcgccgtcagg 768
Query: 919 tggagcgggcccacggtgtagatgggcggcaggagcttcgccatggcagcgagcagcgtc 978
||||||||||| ||||||||||| ||||| || ||| | |||||| || | ||||| |
Sbjct: 767 tggagcgggccgacggtgtagatcggcgggagcagcgcggacatggcggccatcagcggc 708
Query: 979 gcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcctgcgacatg 1029
||||||||||||||||||||||||| || ||||||||||||| ||| ||||
Sbjct: 707 gcgtcgagctcgtcgaaggtgttgaggatcaccgccgacgccagcggcatg 657
>ref|NT_107196.1| Oryza sativa (japonica cultivar-group)
Length = 695877
Score = 391 bits (197), Expect = e-106
Identities = 582/711 (81%), Gaps = 12/711 (1%)
Strand = Plus / Minus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 300480 acggcgctctccctgagctcggccacgcgccgccgcatctccctccccttctccccatcc 300421
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 300420 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 300361
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| ||||||||||||||||||||||||||||| |||
Sbjct: 300360 ccgatcccccactccgtgcgcttgtaccggcagttggtctgctgctcggcgaagaacggc 300301
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||| ||||| || ||||||||||| |||||||||||||||||
Sbjct: 300300 cagcacaccatcggcacgtcgccgacgatgctctccagcgtcgagttccacccggagtgg 300241
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 300240 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 300181
Query: 619 agcatgcttcgtccctctgtcgcagctgagaactctggcggcagcccggcggagtcgcca 678
|||||||| | || | ||||| || | |||||| ||||||||| |||||| ||| ||
Sbjct: 300180 agcatgctcctctcccccgtcgccgccgcgaactccggcggcagcgcggcggcgtcccc- 300122
Query: 679 ctcttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcccc 738
||| |||||||| ||||| |||||||| ||||| ||||||| || ||| ||||||
Sbjct: 300121 --cttcacgaggtcggggcgcacgttccacaggaacgcgtagccgctgccggcgagcccc 300064
Query: 739 cacgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatac 798
||||||||||| | ||| |||||| ||||||||||||||||||||| |||
Sbjct: 300063 cacgcgaactccagcaggtgctcggccgacatcaccgtgatgctcccg---------tac 300013
Query: 799 acaacggagcgcggcgcacggccgttgagccaccggagcggcgcctcctgctccttccac 858
|| ||||||||||||| ||||||| ||||||||||||| | | ||||||||||||||
Sbjct: 300012 acgacggagcgcggcggccggccgtccagccaccggagcgcctcgccctgctccttccac 299953
Query: 859 aggttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtcagc 918
||||||||||| | | ||||| || |||| |||| ||| ||||||||| |||||||
Sbjct: 299952 aggttggacccgacgccggcgacggggctgtccgccggcagattgttccgcgccgtcagg 299893
Query: 919 tggagcgggcccacggtgtagatgggcggcaggagcttcgccatggcagcgagcagcgtc 978
||||||||||| ||||||||||| ||||| || ||| | |||||| || | ||||| |
Sbjct: 299892 tggagcgggccgacggtgtagatcggcgggagcagcgcggacatggcggccatcagcggc 299833
Query: 979 gcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcctgcgacatg 1029
||||||||||||||||||||||||| || ||||||||||||| ||| ||||
Sbjct: 299832 gcgtcgagctcgtcgaaggtgttgaggatcaccgccgacgccagcggcatg 299782
Score = 214 bits (108), Expect = 8e-053
Identities = 258/308 (83%)
Strand = Plus / Plus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 253858 acggcgctctccctgagctccgccacgcgccgccgcatctccctccccttctccccgtcc 253917
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 253918 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 253977
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| | ||||||||||||||||||||||||||| |||
Sbjct: 253978 ccgatcccccactccgtgcgcttgtacctgcagttggtctgctgctcggcgaagaacggc 254037
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||||||||| || ||||||||||| |||||||| ||||||||
Sbjct: 254038 cagcacaccatcggcacgccgccggcgatgctctccagcgtcgagttccagccggagtgg 254097
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 254098 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 254157
Query: 619 agcatgct 626
||||||||
Sbjct: 254158 agcatgct 254165
Score = 204 bits (103), Expect = 7e-050
Identities = 226/267 (84%)
Strand = Plus / Plus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| | |||||| ||||| ||||||| || ||| ||||||||
Sbjct: 254226 cttgacgaggtcggggcgcaagttccacaggaacgcgtagccgctgccggcgagccccca 254285
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 254286 cgcgaactccgccaggtgctcggccgacatcaccgtgatgctcccgaagttgacgtacac 254345
Query: 801 aacggagcgcggcgcacggccgttgagccaccggagcggcgcctcctgctccttccacag 860
||||||||||||| ||||||| ||||||||||||| | | ||||||||||||||||
Sbjct: 254346 cacggagcgcggcggccggccgtccagccaccggagcgcctcgccctgctccttccacag 254405
Query: 861 gttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtcagctg 920
||||||||| | | | ||||| || |||| |||| |||||||| ||||| ||| ||| ||
Sbjct: 254406 gttggacccgacaccggcgacggggctgtccgccggcacgttgctccgcgccgccaggtg 254465
Query: 921 gagcgggcccacggtgtagatgggcgg 947
||||||||| ||||||||||| |||||
Sbjct: 254466 gagcgggccgacggtgtagatcggcgg 254492
Score = 137 bits (69), Expect = 1e-029
Identities = 174/209 (83%)
Strand = Plus / Plus
Query: 367 ttctccccctccatggcctcccgtatgagcgactctacctcgccccgctgtacatcgtca 426
|||||||||||||||||||||||||| |||| | | ||||| || ||| | | ||| |
Sbjct: 619102 ttctccccctccatggcctcccgtatcagcgccgccacctcccctcgccgcgcctcgccg 619161
Query: 427 ccgatctcttttccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcg 486
|||||||| | |||| ||||||||| || | |||||| |||||||| |||||||||||
Sbjct: 619162 ccgatctccatcccgacgccccactccgtccgcttgtaccggcagttcgtctgctgctcc 619221
Query: 487 gcgaagaagggccagcacagcatgggaacgccgccgcaaatactctccagcgtggagttc 546
|||||||| ||||||| |||||| || ||||| || | ||||||||||| ||||||
Sbjct: 619222 gcgaagaacggccagctcagcatcggcacgcccgcggcgaggctctccagcgtcgagttc 619281
Query: 547 cacccggagtgcgtcaggaacacccccac 575
||||||||||||||||||||||| |||||
Sbjct: 619282 cacccggagtgcgtcaggaacacgcccac 619310
Score = 137 bits (69), Expect = 1e-029
Identities = 129/149 (86%)
Strand = Plus / Minus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||||||||||||| || | |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 482322 ccgatgccccactccgtcctcttgtaccggcagttcgtctgctgctccgcgaagaagggc 482263
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| |||||| || |||||| || | |||||||| || ||||||||||||||||||
Sbjct: 482262 cagctcagcatcggcacgccggcggctaggctctccagtgtcgagttccacccggagtgc 482203
Query: 559 gtcaggaacacccccacggcatcatgctc 587
||||||||||| |||||||| || |||||
Sbjct: 482202 gtcaggaacacgcccacggcgtcgtgctc 482174
Score = 137 bits (69), Expect = 1e-029
Identities = 174/209 (83%)
Strand = Plus / Minus
Query: 367 ttctccccctccatggcctcccgtatgagcgactctacctcgccccgctgtacatcgtca 426
|||||||||||||||||||||||||| |||| | | ||||| || ||| | | ||| |
Sbjct: 205057 ttctccccctccatggcctcccgtatcagcgccgccacctcccctcgccgcgcctcgccg 204998
Query: 427 ccgatctcttttccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcg 486
|||||||| | |||| ||||||||| || | |||||| |||||||| |||||||||||
Sbjct: 204997 ccgatctccatcccgacgccccactccgtccgcttgtaccggcagttcgtctgctgctcc 204938
Query: 487 gcgaagaagggccagcacagcatgggaacgccgccgcaaatactctccagcgtggagttc 546
|||||||| ||||||| |||||| || ||||| || | ||||||||||| ||||||
Sbjct: 204937 gcgaagaacggccagctcagcatcggcacgccagcggcgaggctctccagcgtcgagttc 204878
Query: 547 cacccggagtgcgtcaggaacacccccac 575
||||||||||||||||||||||| |||||
Sbjct: 204877 cacccggagtgcgtcaggaacacgcccac 204849
Score = 129 bits (65), Expect = 3e-027
Identities = 119/137 (86%)
Strand = Plus / Minus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| |||| |||||| |||||||| ||||||||||||||||||||||||
Sbjct: 192456 ccgacgccccactccgtgcgcttgtaccggcagttcgtctgctgctcggcgaagaagggc 192397
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| || ||| || || ||| | || | ||||||||||| ||||||||||| ||||||
Sbjct: 192396 cagctcaacattggcacaccggcacagaggctctccagcgtcgagttccacccagagtgc 192337
Query: 559 gtcaggaacacccccac 575
||||||||||| |||||
Sbjct: 192336 gtcaggaacacgcccac 192320
Score = 121 bits (61), Expect = 8e-025
Identities = 118/137 (86%)
Strand = Plus / Plus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| |||| |||||| |||||||| ||||||||||| |||||||| |||
Sbjct: 631791 ccgacgccccactccgtgcgcttgtaccggcagttcgtctgctgctccgcgaagaacggc 631850
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| |||||| || ||||| || | ||||||||||| ||||||||||||||||||
Sbjct: 631851 cagctcagcatcggcacgcccgcggcgaggctctccagcgtcgagttccacccggagtgc 631910
Query: 559 gtcaggaacacccccac 575
||||||||||| |||||
Sbjct: 631911 gtcaggaacacacccac 631927
Score = 117 bits (59), Expect = 1e-023
Identities = 122/143 (85%)
Strand = Plus / Minus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| |||||||| ||||| ||||||| ||| ||| || |||||
Sbjct: 192217 cttgacgaggtcggggcgcacgttccagaggaacgggtagccgctgtgggcgaggcccca 192158
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| | |||||||||||| | |||||| |||||||| ||| ||||||| |||||
Sbjct: 192157 cgcgaactccagcagctgctcgttcgtcatcacggtgatgctgccgtagttgacgtacac 192098
Query: 801 aacggagcgcggcgcacggccgt 823
||||||||||||| |||||||
Sbjct: 192097 gacggagcgcggcggccggccgt 192075
Score = 115 bits (58), Expect = 5e-023
Identities = 153/184 (83%), Gaps = 3/184 (1%)
Strand = Plus / Plus
Query: 648 gaactctggcggcagcccggcggagtcgccactcttgacgaggtccgggcgtacgttcca 707
|||||| ||||||||| |||||| |||||| |||||||||||| ||||| ||||||||
Sbjct: 632000 gaactccggcggcagcacggcggcgtcgcc---cttgacgaggtcggggcgcacgttcca 632056
Query: 708 taggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgttgga 767
||||| ||||||| ||| ||| || ||||| |||||||| | ||||||||||| |
Sbjct: 632057 gaggaatgggtagccgctgtgggcgaggccccaggcgaactccaggagctgctcgttcgt 632116
Query: 768 catcaccgtgatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttgag 827
|||||| | |||||| ||| ||||||| ||||| ||||||||||| | |||||||| |||
Sbjct: 632117 catcacggcgatgctgccgtagttgacgtacacgacggagcgcggaggacggccgtcgag 632176
Query: 828 ccac 831
||||
Sbjct: 632177 ccac 632180
Score = 115 bits (58), Expect = 5e-023
Identities = 153/184 (83%), Gaps = 3/184 (1%)
Strand = Plus / Minus
Query: 648 gaactctggcggcagcccggcggagtcgccactcttgacgaggtccgggcgtacgttcca 707
|||||| ||||||||| |||||| |||||| |||||||||||| ||||| ||||||||
Sbjct: 204776 gaactccggcggcagcacggcggcgtcgcc---cttgacgaggtcggggcgcacgttcca 204720
Query: 708 taggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgttgga 767
||||| ||||||| ||| || || ||||| |||||||||| ||||||||||| |
Sbjct: 204719 gaggaacgggtagccgctgtgagcgaggccccaggcgaactcgaggagctgctcgttcgt 204660
Query: 768 catcaccgtgatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttgag 827
|||||| | |||||| ||| ||||||| ||||| ||||||||||||| ||||||| |||
Sbjct: 204659 catcacggcgatgctgccgtagttgacgtacacgacggagcgcggcggccggccgtcgag 204600
Query: 828 ccac 831
||||
Sbjct: 204599 ccac 204596
Score = 107 bits (54), Expect = 1e-020
Identities = 152/184 (82%), Gaps = 3/184 (1%)
Strand = Plus / Plus
Query: 648 gaactctggcggcagcccggcggagtcgccactcttgacgaggtccgggcgtacgttcca 707
|||||| ||||||||| ||||| |||||| |||||||||||| ||||| ||||||||
Sbjct: 619383 gaactccggcggcagcatggcggcgtcgcc---cttgacgaggtcggggcgcacgttcca 619439
Query: 708 taggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgttgga 767
||||| ||||||| ||| || || ||||| |||||||||| ||||||||||| |
Sbjct: 619440 gaggaacgggtagccgctgtgagcgaggccccaggcgaactcgaggagctgctcgttcgt 619499
Query: 768 catcaccgtgatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttgag 827
|||||| | |||||| ||| ||||||| ||||| ||||||||||||| ||||||| |||
Sbjct: 619500 catcacggcgatgctgccgtagttgacgtacacgacggagcgcggcggccggccgtcgag 619559
Query: 828 ccac 831
||||
Sbjct: 619560 ccac 619563
Score = 89.7 bits (45), Expect = 3e-015
Identities = 99/117 (84%)
Strand = Plus / Minus
Query: 459 cttgtatcggcagttggtctgctgctcggcgaagaagggccagcacagcatgggaacgcc 518
|||||| |||||||| ||||||||||| |||||||| |||||| |||||| || |||||
Sbjct: 499856 cttgtaccggcagttcgtctgctgctccgcgaagaacagccagctcagcatcggcacgcc 499797
Query: 519 gccgcaaatactctccagcgtggagttccacccggagtgcgtcaggaacacccccac 575
| | ||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 499796 ggaggcggggctctccagcgtcgagttccacccggagtgcgtcaggaacacacccac 499740
Score = 73.8 bits (37), Expect = 2e-010
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 978 cgcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcctgcgacatgc 1030
||||||||||||||||||||||||||||| ||||||| |||| |||||||||
Sbjct: 254532 cgcgtcgagctcgtcgaaggtgttgatgatcaccgcctccgccagcgacatgc 254584
Score = 71.9 bits (36), Expect = 7e-010
Identities = 105/128 (82%)
Strand = Plus / Minus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| ||| ||| | |||| ||||||| ||| ||| ||||||||
Sbjct: 482074 cttgacgaggtctgggcggacgacccacacgaaggcgtagccgctgtcggcgagccccca 482015
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| | |||||||||| | | |||||||| |||||| ||| || | || |||||
Sbjct: 482014 cgcgaactccagcagctgctcgctcgtcatcaccgcgatgctgccgtagctcacgtacac 481955
Query: 801 aacggagc 808
|||||||
Sbjct: 481954 gacggagc 481947
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 353 gcatctcttgccctttctccccctccatggcctcccgtat 392
||||||| |||||||||||||||||||||||||||||||
Sbjct: 631705 gcatctcccgccctttctccccctccatggcctcccgtat 631744
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 353 gcatctcttgccctttctccccctccatggcctcccgtat 392
||||||| |||||||||||||||||||||||||||||||
Sbjct: 192542 gcatctcccgccctttctccccctccatggcctcccgtat 192503
Score = 46.1 bits (23), Expect = 0.040
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 362 gccctttctccccctccatggcctcccgtat 392
|||| |||| |||||||||||||||||||||
Sbjct: 482399 gccccttcttcccctccatggcctcccgtat 482369
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 391 bits (197), Expect = e-106
Identities = 582/711 (81%), Gaps = 12/711 (1%)
Strand = Plus / Minus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 14832343 acggcgctctccctgagctcggccacgcgccgccgcatctccctccccttctccccatcc 14832284
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 14832283 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 14832224
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| ||||||||||||||||||||||||||||| |||
Sbjct: 14832223 ccgatcccccactccgtgcgcttgtaccggcagttggtctgctgctcggcgaagaacggc 14832164
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||| ||||| || ||||||||||| |||||||||||||||||
Sbjct: 14832163 cagcacaccatcggcacgtcgccgacgatgctctccagcgtcgagttccacccggagtgg 14832104
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 14832103 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 14832044
Query: 619 agcatgcttcgtccctctgtcgcagctgagaactctggcggcagcccggcggagtcgcca 678
|||||||| | || | ||||| || | |||||| ||||||||| |||||| ||| ||
Sbjct: 14832043 agcatgctcctctcccccgtcgccgccgcgaactccggcggcagcgcggcggcgtcccc- 14831985
Query: 679 ctcttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcccc 738
||| |||||||| ||||| |||||||| ||||| ||||||| || ||| ||||||
Sbjct: 14831984 --cttcacgaggtcggggcgcacgttccacaggaacgcgtagccgctgccggcgagcccc 14831927
Query: 739 cacgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatac 798
||||||||||| | ||| |||||| ||||||||||||||||||||| |||
Sbjct: 14831926 cacgcgaactccagcaggtgctcggccgacatcaccgtgatgctcccg---------tac 14831876
Query: 799 acaacggagcgcggcgcacggccgttgagccaccggagcggcgcctcctgctccttccac 858
|| ||||||||||||| ||||||| ||||||||||||| | | ||||||||||||||
Sbjct: 14831875 acgacggagcgcggcggccggccgtccagccaccggagcgcctcgccctgctccttccac 14831816
Query: 859 aggttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtcagc 918
||||||||||| | | ||||| || |||| |||| ||| ||||||||| |||||||
Sbjct: 14831815 aggttggacccgacgccggcgacggggctgtccgccggcagattgttccgcgccgtcagg 14831756
Query: 919 tggagcgggcccacggtgtagatgggcggcaggagcttcgccatggcagcgagcagcgtc 978
||||||||||| ||||||||||| ||||| || ||| | |||||| || | ||||| |
Sbjct: 14831755 tggagcgggccgacggtgtagatcggcgggagcagcgcggacatggcggccatcagcggc 14831696
Query: 979 gcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcctgcgacatg 1029
||||||||||||||||||||||||| || ||||||||||||| ||| ||||
Sbjct: 14831695 gcgtcgagctcgtcgaaggtgttgaggatcaccgccgacgccagcggcatg 14831645
Score = 214 bits (108), Expect = 8e-053
Identities = 258/308 (83%)
Strand = Plus / Plus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 14785721 acggcgctctccctgagctccgccacgcgccgccgcatctccctccccttctccccgtcc 14785780
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 14785781 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 14785840
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| | ||||||||||||||||||||||||||| |||
Sbjct: 14785841 ccgatcccccactccgtgcgcttgtacctgcagttggtctgctgctcggcgaagaacggc 14785900
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||||||||| || ||||||||||| |||||||| ||||||||
Sbjct: 14785901 cagcacaccatcggcacgccgccggcgatgctctccagcgtcgagttccagccggagtgg 14785960
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 14785961 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 14786020
Query: 619 agcatgct 626
||||||||
Sbjct: 14786021 agcatgct 14786028
Score = 204 bits (103), Expect = 7e-050
Identities = 226/267 (84%)
Strand = Plus / Plus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| | |||||| ||||| ||||||| || ||| ||||||||
Sbjct: 14786089 cttgacgaggtcggggcgcaagttccacaggaacgcgtagccgctgccggcgagccccca 14786148
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 14786149 cgcgaactccgccaggtgctcggccgacatcaccgtgatgctcccgaagttgacgtacac 14786208
Query: 801 aacggagcgcggcgcacggccgttgagccaccggagcggcgcctcctgctccttccacag 860
||||||||||||| ||||||| ||||||||||||| | | ||||||||||||||||
Sbjct: 14786209 cacggagcgcggcggccggccgtccagccaccggagcgcctcgccctgctccttccacag 14786268
Query: 861 gttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtcagctg 920
||||||||| | | | ||||| || |||| |||| |||||||| ||||| ||| ||| ||
Sbjct: 14786269 gttggacccgacaccggcgacggggctgtccgccggcacgttgctccgcgccgccaggtg 14786328
Query: 921 gagcgggcccacggtgtagatgggcgg 947
||||||||| ||||||||||| |||||
Sbjct: 14786329 gagcgggccgacggtgtagatcggcgg 14786355
Score = 143 bits (72), Expect = 2e-031
Identities = 144/168 (85%)
Strand = Plus / Minus
Query: 444 gccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggccagca 503
||||||||||||||| |||| |||| ||||||||||||||| |||||||| ||||||||
Sbjct: 22457555 gccccactcggtgcagctgtaccggcggttggtctgctgctccgcgaagaacggccagca 22457496
Query: 504 cagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgcgtcag 563
|||||| || || |||||||| | ||||||| ||| |||||||| ||||||||||||||
Sbjct: 22457495 cagcatcggcaccccgccgcagaggctctccaccgtcgagttccagccggagtgcgtcag 22457436
Query: 564 gaacacccccacggcatcatgctccagcacagctgcctgcgggcacca 611
|||||| ||||| || || ||| |||||| || |||||||||||||
Sbjct: 22457435 gaacacgcccaccgcctcgtgccgcagcaccgcctcctgcgggcacca 22457388
Score = 137 bits (69), Expect = 1e-029
Identities = 174/209 (83%)
Strand = Plus / Plus
Query: 367 ttctccccctccatggcctcccgtatgagcgactctacctcgccccgctgtacatcgtca 426
|||||||||||||||||||||||||| |||| | | ||||| || ||| | | ||| |
Sbjct: 15150965 ttctccccctccatggcctcccgtatcagcgccgccacctcccctcgccgcgcctcgccg 15151024
Query: 427 ccgatctcttttccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcg 486
|||||||| | |||| ||||||||| || | |||||| |||||||| |||||||||||
Sbjct: 15151025 ccgatctccatcccgacgccccactccgtccgcttgtaccggcagttcgtctgctgctcc 15151084
Query: 487 gcgaagaagggccagcacagcatgggaacgccgccgcaaatactctccagcgtggagttc 546
|||||||| ||||||| |||||| || ||||| || | ||||||||||| ||||||
Sbjct: 15151085 gcgaagaacggccagctcagcatcggcacgcccgcggcgaggctctccagcgtcgagttc 15151144
Query: 547 cacccggagtgcgtcaggaacacccccac 575
||||||||||||||||||||||| |||||
Sbjct: 15151145 cacccggagtgcgtcaggaacacgcccac 15151173
Score = 137 bits (69), Expect = 1e-029
Identities = 129/149 (86%)
Strand = Plus / Minus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||||||||||||| || | |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 15014185 ccgatgccccactccgtcctcttgtaccggcagttcgtctgctgctccgcgaagaagggc 15014126
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| |||||| || |||||| || | |||||||| || ||||||||||||||||||
Sbjct: 15014125 cagctcagcatcggcacgccggcggctaggctctccagtgtcgagttccacccggagtgc 15014066
Query: 559 gtcaggaacacccccacggcatcatgctc 587
||||||||||| |||||||| || |||||
Sbjct: 15014065 gtcaggaacacgcccacggcgtcgtgctc 15014037
Score = 137 bits (69), Expect = 1e-029
Identities = 174/209 (83%)
Strand = Plus / Minus
Query: 367 ttctccccctccatggcctcccgtatgagcgactctacctcgccccgctgtacatcgtca 426
|||||||||||||||||||||||||| |||| | | ||||| || ||| | | ||| |
Sbjct: 14736920 ttctccccctccatggcctcccgtatcagcgccgccacctcccctcgccgcgcctcgccg 14736861
Query: 427 ccgatctcttttccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcg 486
|||||||| | |||| ||||||||| || | |||||| |||||||| |||||||||||
Sbjct: 14736860 ccgatctccatcccgacgccccactccgtccgcttgtaccggcagttcgtctgctgctcc 14736801
Query: 487 gcgaagaagggccagcacagcatgggaacgccgccgcaaatactctccagcgtggagttc 546
|||||||| ||||||| |||||| || ||||| || | ||||||||||| ||||||
Sbjct: 14736800 gcgaagaacggccagctcagcatcggcacgccagcggcgaggctctccagcgtcgagttc 14736741
Query: 547 cacccggagtgcgtcaggaacacccccac 575
||||||||||||||||||||||| |||||
Sbjct: 14736740 cacccggagtgcgtcaggaacacgcccac 14736712
Score = 137 bits (69), Expect = 1e-029
Identities = 129/149 (86%)
Strand = Plus / Plus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||||||||||||| || | |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 14364377 ccgatgccccactccgtcctcttgtaccggcagttcgtctgctgctccgcgaagaagggc 14364436
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| |||||| || |||||| || | |||||||| || ||||||||||||||||||
Sbjct: 14364437 cagctcagcatcggcacgccggcggctaggctctccagtgtcgagttccacccggagtgc 14364496
Query: 559 gtcaggaacacccccacggcatcatgctc 587
||||||||||| |||||||| || |||||
Sbjct: 14364497 gtcaggaacacgcccacggcgtcgtgctc 14364525
Score = 129 bits (65), Expect = 3e-027
Identities = 119/137 (86%)
Strand = Plus / Minus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| |||| |||||| |||||||| ||||||||||||||||||||||||
Sbjct: 14724319 ccgacgccccactccgtgcgcttgtaccggcagttcgtctgctgctcggcgaagaagggc 14724260
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| || ||| || || ||| | || | ||||||||||| ||||||||||| ||||||
Sbjct: 14724259 cagctcaacattggcacaccggcacagaggctctccagcgtcgagttccacccagagtgc 14724200
Query: 559 gtcaggaacacccccac 575
||||||||||| |||||
Sbjct: 14724199 gtcaggaacacgcccac 14724183
Score = 121 bits (61), Expect = 8e-025
Identities = 118/137 (86%)
Strand = Plus / Plus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| |||| |||||| |||||||| ||||||||||| |||||||| |||
Sbjct: 15163654 ccgacgccccactccgtgcgcttgtaccggcagttcgtctgctgctccgcgaagaacggc 15163713
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| |||||| || ||||| || | ||||||||||| ||||||||||||||||||
Sbjct: 15163714 cagctcagcatcggcacgcccgcggcgaggctctccagcgtcgagttccacccggagtgc 15163773
Query: 559 gtcaggaacacccccac 575
||||||||||| |||||
Sbjct: 15163774 gtcaggaacacacccac 15163790
Score = 117 bits (59), Expect = 1e-023
Identities = 122/143 (85%)
Strand = Plus / Minus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| |||||||| ||||| ||||||| ||| ||| || |||||
Sbjct: 14724080 cttgacgaggtcggggcgcacgttccagaggaacgggtagccgctgtgggcgaggcccca 14724021
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| | |||||||||||| | |||||| |||||||| ||| ||||||| |||||
Sbjct: 14724020 cgcgaactccagcagctgctcgttcgtcatcacggtgatgctgccgtagttgacgtacac 14723961
Query: 801 aacggagcgcggcgcacggccgt 823
||||||||||||| |||||||
Sbjct: 14723960 gacggagcgcggcggccggccgt 14723938
Score = 115 bits (58), Expect = 5e-023
Identities = 153/184 (83%), Gaps = 3/184 (1%)
Strand = Plus / Plus
Query: 648 gaactctggcggcagcccggcggagtcgccactcttgacgaggtccgggcgtacgttcca 707
|||||| ||||||||| |||||| |||||| |||||||||||| ||||| ||||||||
Sbjct: 15163863 gaactccggcggcagcacggcggcgtcgcc---cttgacgaggtcggggcgcacgttcca 15163919
Query: 708 taggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgttgga 767
||||| ||||||| ||| ||| || ||||| |||||||| | ||||||||||| |
Sbjct: 15163920 gaggaatgggtagccgctgtgggcgaggccccaggcgaactccaggagctgctcgttcgt 15163979
Query: 768 catcaccgtgatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttgag 827
|||||| | |||||| ||| ||||||| ||||| ||||||||||| | |||||||| |||
Sbjct: 15163980 catcacggcgatgctgccgtagttgacgtacacgacggagcgcggaggacggccgtcgag 15164039
Query: 828 ccac 831
||||
Sbjct: 15164040 ccac 15164043
Score = 115 bits (58), Expect = 5e-023
Identities = 153/184 (83%), Gaps = 3/184 (1%)
Strand = Plus / Minus
Query: 648 gaactctggcggcagcccggcggagtcgccactcttgacgaggtccgggcgtacgttcca 707
|||||| ||||||||| |||||| |||||| |||||||||||| ||||| ||||||||
Sbjct: 14736639 gaactccggcggcagcacggcggcgtcgcc---cttgacgaggtcggggcgcacgttcca 14736583
Query: 708 taggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgttgga 767
||||| ||||||| ||| || || ||||| |||||||||| ||||||||||| |
Sbjct: 14736582 gaggaacgggtagccgctgtgagcgaggccccaggcgaactcgaggagctgctcgttcgt 14736523
Query: 768 catcaccgtgatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttgag 827
|||||| | |||||| ||| ||||||| ||||| ||||||||||||| ||||||| |||
Sbjct: 14736522 catcacggcgatgctgccgtagttgacgtacacgacggagcgcggcggccggccgtcgag 14736463
Query: 828 ccac 831
||||
Sbjct: 14736462 ccac 14736459
Score = 107 bits (54), Expect = 1e-020
Identities = 152/184 (82%), Gaps = 3/184 (1%)
Strand = Plus / Plus
Query: 648 gaactctggcggcagcccggcggagtcgccactcttgacgaggtccgggcgtacgttcca 707
|||||| ||||||||| ||||| |||||| |||||||||||| ||||| ||||||||
Sbjct: 15151246 gaactccggcggcagcatggcggcgtcgcc---cttgacgaggtcggggcgcacgttcca 15151302
Query: 708 taggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgttgga 767
||||| ||||||| ||| || || ||||| |||||||||| ||||||||||| |
Sbjct: 15151303 gaggaacgggtagccgctgtgagcgaggccccaggcgaactcgaggagctgctcgttcgt 15151362
Query: 768 catcaccgtgatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttgag 827
|||||| | |||||| ||| ||||||| ||||| ||||||||||||| ||||||| |||
Sbjct: 15151363 catcacggcgatgctgccgtagttgacgtacacgacggagcgcggcggccggccgtcgag 15151422
Query: 828 ccac 831
||||
Sbjct: 15151423 ccac 15151426
Score = 89.7 bits (45), Expect = 3e-015
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 687 gaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcccccacgcgaa 746
|||||| ||||| ||| |||| ||||||| || |||| ||||||| ||||||||||||||
Sbjct: 22457315 gaggtcggggcggacgatccacaggaagtcgtggccgctgttggcgagcccccacgcgaa 22457256
Query: 747 ctcgaccagctgctcgttggacatcaccgtgatgctcccgaagtt 791
||| ||||||| |||||| | ||||||||||| ||| ||| ||||
Sbjct: 22457255 ctcaaccagctcctcgttcgtcatcaccgtgacgctgccgtagtt 22457211
Score = 89.7 bits (45), Expect = 3e-015
Identities = 99/117 (84%)
Strand = Plus / Minus
Query: 459 cttgtatcggcagttggtctgctgctcggcgaagaagggccagcacagcatgggaacgcc 518
|||||| |||||||| ||||||||||| |||||||| |||||| |||||| || |||||
Sbjct: 15031719 cttgtaccggcagttcgtctgctgctccgcgaagaacagccagctcagcatcggcacgcc 15031660
Query: 519 gccgcaaatactctccagcgtggagttccacccggagtgcgtcaggaacacccccac 575
| | ||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 15031659 ggaggcggggctctccagcgtcgagttccacccggagtgcgtcaggaacacacccac 15031603
Score = 81.8 bits (41), Expect = 7e-013
Identities = 98/117 (83%)
Strand = Plus / Plus
Query: 459 cttgtatcggcagttggtctgctgctcggcgaagaagggccagcacagcatgggaacgcc 518
|||||| |||||||| ||||||||||| |||||||| |||||| |||||| | |||||
Sbjct: 14355223 cttgtaccggcagttcgtctgctgctccgcgaagaacagccagctcagcatcagcacgcc 14355282
Query: 519 gccgcaaatactctccagcgtggagttccacccggagtgcgtcaggaacacccccac 575
| | ||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 14355283 ggaggcggggctctccagcgtcgagttccacccggagtgcgtcaggaacacacccac 14355339
Score = 73.8 bits (37), Expect = 2e-010
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 978 cgcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcctgcgacatgc 1030
||||||||||||||||||||||||||||| ||||||| |||| |||||||||
Sbjct: 14786395 cgcgtcgagctcgtcgaaggtgttgatgatcaccgcctccgccagcgacatgc 14786447
Score = 71.9 bits (36), Expect = 7e-010
Identities = 105/128 (82%)
Strand = Plus / Minus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| ||| ||| | |||| ||||||| ||| ||| ||||||||
Sbjct: 15013937 cttgacgaggtctgggcggacgacccacacgaaggcgtagccgctgtcggcgagccccca 15013878
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| | |||||||||| | | |||||||| |||||| ||| || | || |||||
Sbjct: 15013877 cgcgaactccagcagctgctcgctcgtcatcaccgcgatgctgccgtagctcacgtacac 15013818
Query: 801 aacggagc 808
|||||||
Sbjct: 15013817 gacggagc 15013810
Score = 71.9 bits (36), Expect = 7e-010
Identities = 105/128 (82%)
Strand = Plus / Plus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| ||| ||| | |||| ||||||| ||| ||| ||||||||
Sbjct: 14364625 cttgacgaggtctgggcggacgacccacacgaaggcgtagccgctgtcggcgagccccca 14364684
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| | |||||||||| | | |||||||| |||||| ||| || | || |||||
Sbjct: 14364685 cgcgaactccagcagctgctcgctcgtcatcaccgcgatgctgccgtagctcacgtacac 14364744
Query: 801 aacggagc 808
|||||||
Sbjct: 14364745 gacggagc 14364752
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 353 gcatctcttgccctttctccccctccatggcctcccgtat 392
||||||| |||||||||||||||||||||||||||||||
Sbjct: 15163568 gcatctcccgccctttctccccctccatggcctcccgtat 15163607
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 353 gcatctcttgccctttctccccctccatggcctcccgtat 392
||||||| |||||||||||||||||||||||||||||||
Sbjct: 14724405 gcatctcccgccctttctccccctccatggcctcccgtat 14724366
Score = 46.1 bits (23), Expect = 0.040
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 362 gccctttctccccctccatggcctcccgtat 392
|||| |||| |||||||||||||||||||||
Sbjct: 15014262 gccccttcttcccctccatggcctcccgtat 15014232
Score = 46.1 bits (23), Expect = 0.040
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 362 gccctttctccccctccatggcctcccgtat 392
|||| |||| |||||||||||||||||||||
Sbjct: 14364300 gccccttcttcccctccatggcctcccgtat 14364330
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 982 tcgagctcgtcgaaggtgttga 1003
||||||||||||||||||||||
Sbjct: 22457011 tcgagctcgtcgaaggtgttga 22456990
>gb|AACV01018433.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018433, whole
genome shotgun sequence
Length = 17646
Score = 355 bits (179), Expect = 3e-095
Identities = 581/713 (81%), Gaps = 14/713 (1%)
Strand = Plus / Minus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 4035 acggcgctctccctgagctcggccacgcgccgccgcatctccctccccttctccccatcc 3976
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 3975 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 3916
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| ||||||||||||||||||||||||||||| |||
Sbjct: 3915 ccgatcccccactccgtgcgcttgtaccggcagttggtctgctgctcggcgaagaacggc 3856
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 3855 cagcacaccatcggcacgccgccgacgatgctctccagcgtcgagttccacccggagtgg 3796
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 3795 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 3736
Query: 619 agcatgcttcgtccctctgtcgcagctgagaactctggcggcagcccggcggagtcgcca 678
|||||||| | || | ||| | || | |||||| ||||||||| |||||| ||| ||
Sbjct: 3735 agcatgctcctctcccccgtcaccgccgcgaactccggcggcagcgcggcggcgtcccc- 3677
Query: 679 ctcttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcccc 738
||| |||||||| ||||| |||||||| ||||| ||||||| || ||| ||||||
Sbjct: 3676 --cttcacgaggtctgggcgcacgttccacaggaacgcgtagccgctgccggcgagcccc 3619
Query: 739 cacgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatac 798
|| |||||||| | ||| |||||| ||||||||||||||||||||| |||
Sbjct: 3618 caagcgaactccagcaggtgctcggccgacatcaccgtgatgctcccg---------tac 3568
Query: 799 acaacggagcgcggcg-cacggccgttgagcca-ccggagcggcgcctcctgctccttcc 856
|| ||||||||||||| ||||||| ||||| |||||||| | | ||||||||||||
Sbjct: 3567 acgacggagcgcggcgtgccggccgtccagccacccggagcgcctcgccctgctccttcc 3508
Query: 857 acaggttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtca 916
||||||||||||| | | ||||| || |||| |||| ||| ||||||||| ||||||
Sbjct: 3507 acaggttggacccgacgccggcgacggggctgtccgccggcagattgttccgcgccgtca 3448
Query: 917 gctggagcgggcccacggtgtagatgggcggcaggagcttcgccatggcagcgagcagcg 976
| ||||||||||| ||||||||||| ||||| || ||| | |||||| || | |||||
Sbjct: 3447 ggtggagcgggccgacggtgtagatcggcgggagcagcgcggacatggcggccatcagcg 3388
Query: 977 tcgcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcctgcgacatg 1029
|||||||||||||||||||||||||| || ||||||||||||| ||| ||||
Sbjct: 3387 gcgcgtcgagctcgtcgaaggtgttgaggatcaccgccgacgccagcggcatg 3335
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067 genomic
scaffold, whole genome shotgun sequence
Length = 19501165
Score = 355 bits (179), Expect = 3e-095
Identities = 581/713 (81%), Gaps = 14/713 (1%)
Strand = Plus / Minus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 10544259 acggcgctctccctgagctcggccacgcgccgccgcatctccctccccttctccccatcc 10544200
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 10544199 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 10544140
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| ||||||||||||||||||||||||||||| |||
Sbjct: 10544139 ccgatcccccactccgtgcgcttgtaccggcagttggtctgctgctcggcgaagaacggc 10544080
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 10544079 cagcacaccatcggcacgccgccgacgatgctctccagcgtcgagttccacccggagtgg 10544020
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 10544019 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 10543960
Query: 619 agcatgcttcgtccctctgtcgcagctgagaactctggcggcagcccggcggagtcgcca 678
|||||||| | || | ||| | || | |||||| ||||||||| |||||| ||| ||
Sbjct: 10543959 agcatgctcctctcccccgtcaccgccgcgaactccggcggcagcgcggcggcgtcccc- 10543901
Query: 679 ctcttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcccc 738
||| |||||||| ||||| |||||||| ||||| ||||||| || ||| ||||||
Sbjct: 10543900 --cttcacgaggtctgggcgcacgttccacaggaacgcgtagccgctgccggcgagcccc 10543843
Query: 739 cacgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatac 798
|| |||||||| | ||| |||||| ||||||||||||||||||||| |||
Sbjct: 10543842 caagcgaactccagcaggtgctcggccgacatcaccgtgatgctcccg---------tac 10543792
Query: 799 acaacggagcgcggcg-cacggccgttgagcca-ccggagcggcgcctcctgctccttcc 856
|| ||||||||||||| ||||||| ||||| |||||||| | | ||||||||||||
Sbjct: 10543791 acgacggagcgcggcgtgccggccgtccagccacccggagcgcctcgccctgctccttcc 10543732
Query: 857 acaggttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtca 916
||||||||||||| | | ||||| || |||| |||| ||| ||||||||| ||||||
Sbjct: 10543731 acaggttggacccgacgccggcgacggggctgtccgccggcagattgttccgcgccgtca 10543672
Query: 917 gctggagcgggcccacggtgtagatgggcggcaggagcttcgccatggcagcgagcagcg 976
| ||||||||||| ||||||||||| ||||| || ||| | |||||| || | |||||
Sbjct: 10543671 ggtggagcgggccgacggtgtagatcggcgggagcagcgcggacatggcggccatcagcg 10543612
Query: 977 tcgcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcctgcgacatg 1029
|||||||||||||||||||||||||| || ||||||||||||| ||| ||||
Sbjct: 10543611 gcgcgtcgagctcgtcgaaggtgttgaggatcaccgccgacgccagcggcatg 10543559
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 535 agcgtggagttccacccggagtgcgtcaggaacacccccacggc 578
||||| |||||||| ||| |||||||||||||| | ||||||||
Sbjct: 15373597 agcgtcgagttccagccgcagtgcgtcaggaacgcgcccacggc 15373640
Score = 44.1 bits (22), Expect = 0.16
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 541 gagttccacccggagtgcgtcaggaacacccccacggc 578
|||||||| ||| |||||||||||||| |||||||||
Sbjct: 15340769 gagttccagccgcagtgcgtcaggaaccaccccacggc 15340732
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 355 bits (179), Expect = 3e-095
Identities = 581/713 (81%), Gaps = 14/713 (1%)
Strand = Plus / Minus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 18146265 acggcgctctccctgagctcggccacgcgccgccgcatctccctccccttctccccatcc 18146206
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 18146205 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 18146146
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| ||||||||||||||||||||||||||||| |||
Sbjct: 18146145 ccgatcccccactccgtgcgcttgtaccggcagttggtctgctgctcggcgaagaacggc 18146086
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 18146085 cagcacaccatcggcacgccgccgacgatgctctccagcgtcgagttccacccggagtgg 18146026
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 18146025 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 18145966
Query: 619 agcatgcttcgtccctctgtcgcagctgagaactctggcggcagcccggcggagtcgcca 678
|||||||| | || | ||| | || | |||||| ||||||||| |||||| ||| ||
Sbjct: 18145965 agcatgctcctctcccccgtcaccgccgcgaactccggcggcagcgcggcggcgtcccc- 18145907
Query: 679 ctcttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcccc 738
||| |||||||| ||||| |||||||| ||||| ||||||| || ||| ||||||
Sbjct: 18145906 --cttcacgaggtctgggcgcacgttccacaggaacgcgtagccgctgccggcgagcccc 18145849
Query: 739 cacgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatac 798
|| |||||||| | ||| |||||| ||||||||||||||||||||| |||
Sbjct: 18145848 caagcgaactccagcaggtgctcggccgacatcaccgtgatgctcccg---------tac 18145798
Query: 799 acaacggagcgcggcg-cacggccgttgagcca-ccggagcggcgcctcctgctccttcc 856
|| ||||||||||||| ||||||| ||||| |||||||| | | ||||||||||||
Sbjct: 18145797 acgacggagcgcggcgtgccggccgtccagccacccggagcgcctcgccctgctccttcc 18145738
Query: 857 acaggttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtca 916
||||||||||||| | | ||||| || |||| |||| ||| ||||||||| ||||||
Sbjct: 18145737 acaggttggacccgacgccggcgacggggctgtccgccggcagattgttccgcgccgtca 18145678
Query: 917 gctggagcgggcccacggtgtagatgggcggcaggagcttcgccatggcagcgagcagcg 976
| ||||||||||| ||||||||||| ||||| || ||| | |||||| || | |||||
Sbjct: 18145677 ggtggagcgggccgacggtgtagatcggcgggagcagcgcggacatggcggccatcagcg 18145618
Query: 977 tcgcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcctgcgacatg 1029
|||||||||||||||||||||||||| || ||||||||||||| ||| ||||
Sbjct: 18145617 gcgcgtcgagctcgtcgaaggtgttgaggatcaccgccgacgccagcggcatg 18145565
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 535 agcgtggagttccacccggagtgcgtcaggaacacccccacggc 578
||||| |||||||| ||| |||||||||||||| | ||||||||
Sbjct: 22975603 agcgtcgagttccagccgcagtgcgtcaggaacgcgcccacggc 22975646
Score = 44.1 bits (22), Expect = 0.16
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 541 gagttccacccggagtgcgtcaggaacacccccacggc 578
|||||||| ||| |||||||||||||| |||||||||
Sbjct: 22942775 gagttccagccgcagtgcgtcaggaaccaccccacggc 22942738
>gb|CB675196.1|CB675196 OSJNEe10M08.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe10M08 3', mRNA sequence
Length = 792
Score = 214 bits (108), Expect = 8e-053
Identities = 258/308 (83%)
Strand = Plus / Plus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 255 acggcgctctccctgagctccgccacgcgccgccgcatctccctccccttctccccgtcc 314
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 315 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 374
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| | ||||||||||||||||||||||||||| |||
Sbjct: 375 ccgatcccccactccgtgcgcttgtacctgcagttggtctgctgctcggcgaagaacggc 434
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||||||||| || ||||||||||| |||||||| ||||||||
Sbjct: 435 cagcacaccatcggcacgccgccggcgatgctctccagcgtcgagttccagccggagtgg 494
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 495 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 554
Query: 619 agcatgct 626
||||||||
Sbjct: 555 agcatgct 562
Score = 131 bits (66), Expect = 9e-028
Identities = 135/158 (85%)
Strand = Plus / Plus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| | |||||| ||||| ||||||| || ||| ||||||||
Sbjct: 623 cttgacgaggtcggggcgcaagttccacaggaacgcgtagccgctgccggcgagccccca 682
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 683 cgcgaactccgccaggtgctcggccgacatcaccgtgatgctcccgaagttgacgtacac 742
Query: 801 aacggagcgcggcgcacggccgttgagccaccggagcg 838
||||||||||||| ||||||| |||||||||||||
Sbjct: 743 cacggagcgcggcggccggccgtccagccaccggagcg 780
>dbj|AK105783.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-G07, full
insert sequence
Length = 1640
Score = 214 bits (108), Expect = 8e-053
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 1457 acggcgctctccctgagctccgccacgcgccgccgcatctccctccccttctccccgtcc 1398
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 1397 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 1338
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| | ||||||||||||||||||||||||||| |||
Sbjct: 1337 ccgatcccccactccgtgcgcttgtacctgcagttggtctgctgctcggcgaagaacggc 1278
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||||||||| || ||||||||||| |||||||| ||||||||
Sbjct: 1277 cagcacaccatcggcacgccgccggcgatgctctccagcgtcgagttccagccggagtgg 1218
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 1217 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 1158
Query: 619 agcatgct 626
||||||||
Sbjct: 1157 agcatgct 1150
Score = 204 bits (103), Expect = 7e-050
Identities = 226/267 (84%)
Strand = Plus / Minus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| | |||||| ||||| ||||||| || ||| ||||||||
Sbjct: 1089 cttgacgaggtcggggcgcaagttccacaggaacgcgtagccgctgccggcgagccccca 1030
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 1029 cgcgaactccgccaggtgctcggccgacatcaccgtgatgctcccgaagttgacgtacac 970
Query: 801 aacggagcgcggcgcacggccgttgagccaccggagcggcgcctcctgctccttccacag 860
||||||||||||| ||||||| ||||||||||||| | | ||||||||||||||||
Sbjct: 969 cacggagcgcggcggccggccgtccagccaccggagcgcctcgccctgctccttccacag 910
Query: 861 gttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtcagctg 920
||||||||| | | | ||||| || |||| |||| |||||||| ||||| ||| ||| ||
Sbjct: 909 gttggacccgacaccggcgacggggctgtccgccggcacgttgctccgcgccgccaggtg 850
Query: 921 gagcgggcccacggtgtagatgggcgg 947
||||||||| ||||||||||| |||||
Sbjct: 849 gagcgggccgacggtgtagatcggcgg 823
Score = 73.8 bits (37), Expect = 2e-010
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 978 cgcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcctgcgacatgc 1030
||||||||||||||||||||||||||||| ||||||| |||| |||||||||
Sbjct: 783 cgcgtcgagctcgtcgaaggtgttgatgatcaccgcctccgccagcgacatgc 731
>dbj|AK105966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E07, full
insert sequence
Length = 1665
Score = 214 bits (108), Expect = 8e-053
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 1513 acggcgctctccctgagctccgccacgcgccgccgcatctccctccccttctccccgtcc 1454
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 1453 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 1394
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| | ||||||||||||||||||||||||||| |||
Sbjct: 1393 ccgatcccccactccgtgcgcttgtacctgcagttggtctgctgctcggcgaagaacggc 1334
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||||||||| || ||||||||||| |||||||| ||||||||
Sbjct: 1333 cagcacaccatcggcacgccgccggcgatgctctccagcgtcgagttccagccggagtgg 1274
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 1273 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 1214
Query: 619 agcatgct 626
||||||||
Sbjct: 1213 agcatgct 1206
Score = 204 bits (103), Expect = 7e-050
Identities = 226/267 (84%)
Strand = Plus / Minus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| | |||||| ||||| ||||||| || ||| ||||||||
Sbjct: 1145 cttgacgaggtcggggcgcaagttccacaggaacgcgtagccgctgccggcgagccccca 1086
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 1085 cgcgaactccgccaggtgctcggccgacatcaccgtgatgctcccgaagttgacgtacac 1026
Query: 801 aacggagcgcggcgcacggccgttgagccaccggagcggcgcctcctgctccttccacag 860
||||||||||||| ||||||| ||||||||||||| | | ||||||||||||||||
Sbjct: 1025 cacggagcgcggcggccggccgtccagccaccggagcgcctcgccctgctccttccacag 966
Query: 861 gttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtcagctg 920
||||||||| | | | ||||| || |||| |||| |||||||| ||||| ||| ||| ||
Sbjct: 965 gttggacccgacaccggcgacggggctgtccgccggcacgttgctccgcgccgccaggtg 906
Query: 921 gagcgggcccacggtgtagatgggcgg 947
||||||||| ||||||||||| |||||
Sbjct: 905 gagcgggccgacggtgtagatcggcgg 879
Score = 73.8 bits (37), Expect = 2e-010
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 978 cgcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcctgcgacatgc 1030
||||||||||||||||||||||||||||| ||||||| |||| |||||||||
Sbjct: 839 cgcgtcgagctcgtcgaaggtgttgatgatcaccgcctccgccagcgacatgc 787
>dbj|AK119530.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C07, full
insert sequence
Length = 1673
Score = 214 bits (108), Expect = 8e-053
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 1516 acggcgctctccctgagctccgccacgcgccgccgcatctccctccccttctccccgtcc 1457
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 1456 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 1397
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| | ||||||||||||||||||||||||||| |||
Sbjct: 1396 ccgatcccccactccgtgcgcttgtacctgcagttggtctgctgctcggcgaagaacggc 1337
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||||||||| || ||||||||||| |||||||| ||||||||
Sbjct: 1336 cagcacaccatcggcacgccgccggcgatgctctccagcgtcgagttccagccggagtgg 1277
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 1276 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 1217
Query: 619 agcatgct 626
||||||||
Sbjct: 1216 agcatgct 1209
Score = 204 bits (103), Expect = 7e-050
Identities = 226/267 (84%)
Strand = Plus / Minus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| | |||||| ||||| ||||||| || ||| ||||||||
Sbjct: 1148 cttgacgaggtcggggcgcaagttccacaggaacgcgtagccgctgccggcgagccccca 1089
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 1088 cgcgaactccgccaggtgctcggccgacatcaccgtgatgctcccgaagttgacgtacac 1029
Query: 801 aacggagcgcggcgcacggccgttgagccaccggagcggcgcctcctgctccttccacag 860
||||||||||||| ||||||| ||||||||||||| | | ||||||||||||||||
Sbjct: 1028 cacggagcgcggcggccggccgtccagccaccggagcgcctcgccctgctccttccacag 969
Query: 861 gttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtcagctg 920
||||||||| | | | ||||| || |||| |||| |||||||| ||||| ||| ||| ||
Sbjct: 968 gttggacccgacaccggcgacggggctgtccgccggcacgttgctccgcgccgccaggtg 909
Query: 921 gagcgggcccacggtgtagatgggcgg 947
||||||||| ||||||||||| |||||
Sbjct: 908 gagcgggccgacggtgtagatcggcgg 882
Score = 73.8 bits (37), Expect = 2e-010
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 978 cgcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcctgcgacatgc 1030
||||||||||||||||||||||||||||| ||||||| |||| |||||||||
Sbjct: 842 cgcgtcgagctcgtcgaaggtgttgatgatcaccgcctccgccagcgacatgc 790
>gb|AACV01009347.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009347, whole
genome shotgun sequence
Length = 3685
Score = 214 bits (108), Expect = 8e-053
Identities = 258/308 (83%)
Strand = Plus / Plus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 1260 acggcgctctccctgagctccgccacgcgccgccgcatctccctccccttctccccgtcc 1319
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 1320 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 1379
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| | ||||||||||||||||||||||||||| |||
Sbjct: 1380 ccgatcccccactccgtgcgcttgtacctgcagttggtctgctgctcggcgaagaacggc 1439
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||||||||| || ||||||||||| |||||||| ||||||||
Sbjct: 1440 cagcacaccatcggcacgccgccggcgatgctctccagcgtcgagttccagccggagtgg 1499
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 1500 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 1559
Query: 619 agcatgct 626
||||||||
Sbjct: 1560 agcatgct 1567
Score = 196 bits (99), Expect = 2e-047
Identities = 225/267 (84%)
Strand = Plus / Plus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| | |||||| ||||| ||||||| || ||| ||||||||
Sbjct: 1628 cttgacgaggtcggggcgcaagttccacaggaacgcgtagccgctgccggcgagccccca 1687
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 1688 cgcgaactccgccaggtgctcggccgacatcaccgtgatgctcccgaagttgacgtacac 1747
Query: 801 aacggagcgcggcgcacggccgttgagccaccggagcggcgcctcctgctccttccacag 860
||||||||||||| ||||||| ||||||||||||| | | ||||||||||||||||
Sbjct: 1748 cacggagcgcggcggccggccgtccagccaccggagcgcctcgccctgctccttccacag 1807
Query: 861 gttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtcagctg 920
||||||||| | | ||||| || |||| |||| |||||||| ||||| ||| ||| ||
Sbjct: 1808 gttggacccgacgccggcgacggggctgtccgccggcacgttgctccgcgccgccaggtg 1867
Query: 921 gagcgggcccacggtgtagatgggcgg 947
||||||||| ||||||||||| |||||
Sbjct: 1868 gagcgggccgacggtgtagatcggcgg 1894
Score = 73.8 bits (37), Expect = 2e-010
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 978 cgcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcctgcgacatgc 1030
||||||||||||||||||||||||||||| ||||||| |||| |||||||||
Sbjct: 1934 cgcgtcgagctcgtcgaaggtgttgatgatcaccgcctccgccagcgacatgc 1986
>ref|XM_471827.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1494
Score = 214 bits (108), Expect = 8e-053
Identities = 258/308 (83%)
Strand = Plus / Minus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 1421 acggcgctctccctgagctccgccacgcgccgccgcatctccctccccttctccccgtcc 1362
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 1361 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 1302
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| | ||||||||||||||||||||||||||| |||
Sbjct: 1301 ccgatcccccactccgtgcgcttgtacctgcagttggtctgctgctcggcgaagaacggc 1242
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||||||||| || ||||||||||| |||||||| ||||||||
Sbjct: 1241 cagcacaccatcggcacgccgccggcgatgctctccagcgtcgagttccagccggagtgg 1182
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 1181 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 1122
Query: 619 agcatgct 626
||||||||
Sbjct: 1121 agcatgct 1114
Score = 204 bits (103), Expect = 7e-050
Identities = 226/267 (84%)
Strand = Plus / Minus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| | |||||| ||||| ||||||| || ||| ||||||||
Sbjct: 1053 cttgacgaggtcggggcgcaagttccacaggaacgcgtagccgctgccggcgagccccca 994
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 993 cgcgaactccgccaggtgctcggccgacatcaccgtgatgctcccgaagttgacgtacac 934
Query: 801 aacggagcgcggcgcacggccgttgagccaccggagcggcgcctcctgctccttccacag 860
||||||||||||| ||||||| ||||||||||||| | | ||||||||||||||||
Sbjct: 933 cacggagcgcggcggccggccgtccagccaccggagcgcctcgccctgctccttccacag 874
Query: 861 gttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtcagctg 920
||||||||| | | | ||||| || |||| |||| |||||||| ||||| ||| ||| ||
Sbjct: 873 gttggacccgacaccggcgacggggctgtccgccggcacgttgctccgcgccgccaggtg 814
Query: 921 gagcgggcccacggtgtagatgggcgg 947
||||||||| ||||||||||| |||||
Sbjct: 813 gagcgggccgacggtgtagatcggcgg 787
Score = 73.8 bits (37), Expect = 2e-010
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 978 cgcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcctgcgacatgc 1030
||||||||||||||||||||||||||||| ||||||| |||| |||||||||
Sbjct: 747 cgcgtcgagctcgtcgaaggtgttgatgatcaccgcctccgccagcgacatgc 695
>gb|CH401189.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000026 genomic
scaffold, whole genome shotgun sequence
Length = 11796637
Score = 214 bits (108), Expect = 8e-053
Identities = 258/308 (83%)
Strand = Plus / Plus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 5384631 acggcgctctccctgagctccgccacgcgccgccgcatctccctccccttctccccgtcc 5384690
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 5384691 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 5384750
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| | ||||||||||||||||||||||||||| |||
Sbjct: 5384751 ccgatcccccactccgtgcgcttgtacctgcagttggtctgctgctcggcgaagaacggc 5384810
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||||||||| || ||||||||||| |||||||| ||||||||
Sbjct: 5384811 cagcacaccatcggcacgccgccggcgatgctctccagcgtcgagttccagccggagtgg 5384870
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 5384871 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 5384930
Query: 619 agcatgct 626
||||||||
Sbjct: 5384931 agcatgct 5384938
Score = 196 bits (99), Expect = 2e-047
Identities = 225/267 (84%)
Strand = Plus / Plus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| | |||||| ||||| ||||||| || ||| ||||||||
Sbjct: 5384999 cttgacgaggtcggggcgcaagttccacaggaacgcgtagccgctgccggcgagccccca 5385058
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 5385059 cgcgaactccgccaggtgctcggccgacatcaccgtgatgctcccgaagttgacgtacac 5385118
Query: 801 aacggagcgcggcgcacggccgttgagccaccggagcggcgcctcctgctccttccacag 860
||||||||||||| ||||||| ||||||||||||| | | ||||||||||||||||
Sbjct: 5385119 cacggagcgcggcggccggccgtccagccaccggagcgcctcgccctgctccttccacag 5385178
Query: 861 gttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtcagctg 920
||||||||| | | ||||| || |||| |||| |||||||| ||||| ||| ||| ||
Sbjct: 5385179 gttggacccgacgccggcgacggggctgtccgccggcacgttgctccgcgccgccaggtg 5385238
Query: 921 gagcgggcccacggtgtagatgggcgg 947
||||||||| ||||||||||| |||||
Sbjct: 5385239 gagcgggccgacggtgtagatcggcgg 5385265
Score = 137 bits (69), Expect = 1e-029
Identities = 174/209 (83%)
Strand = Plus / Minus
Query: 367 ttctccccctccatggcctcccgtatgagcgactctacctcgccccgctgtacatcgtca 426
|||||||||||||||||||||||||| |||| | | ||||| || ||| | | ||| |
Sbjct: 5307762 ttctccccctccatggcctcccgtatcagcgccgccacctcccctcgccgcgcctcgccg 5307703
Query: 427 ccgatctcttttccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcg 486
|||||||| | |||| ||||||||| || | |||||| |||||||| |||||||||||
Sbjct: 5307702 ccgatctccatcccgacgccccactccgtccgcttgtaccggcagttcgtctgctgctcc 5307643
Query: 487 gcgaagaagggccagcacagcatgggaacgccgccgcaaatactctccagcgtggagttc 546
|||||||| ||||||| |||||| || ||||| || | ||||||||||| ||||||
Sbjct: 5307642 gcgaagaacggccagctcagcatcggcacgcccgcggcgaggctctccagcgtcgagttc 5307583
Query: 547 cacccggagtgcgtcaggaacacccccac 575
||||||||||||||||||||||| |||||
Sbjct: 5307582 cacccggagtgcgtcaggaacacgcccac 5307554
Score = 137 bits (69), Expect = 1e-029
Identities = 129/149 (86%)
Strand = Plus / Plus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||||||||||||| || | |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 4655750 ccgatgccccactccgtcctcttgtaccggcagttcgtctgctgctccgcgaagaagggc 4655809
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| |||||| || |||||| || | |||||||| || ||||||||||||||||||
Sbjct: 4655810 cagctcagcatcggcacgccggcggctaggctctccagtgtcgagttccacccggagtgc 4655869
Query: 559 gtcaggaacacccccacggcatcatgctc 587
||||||||||| |||||||| || |||||
Sbjct: 4655870 gtcaggaacacgcccacggcgtcgtgctc 4655898
Score = 129 bits (65), Expect = 3e-027
Identities = 119/137 (86%)
Strand = Plus / Minus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| |||| |||||| |||||||| ||||||||||||||||||||||||
Sbjct: 5295091 ccgacgccccactccgtgcgcttgtaccggcagttcgtctgctgctcggcgaagaagggc 5295032
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| || ||| || || ||| | || | ||||||||||| ||||||||||| ||||||
Sbjct: 5295031 cagctcaacattggcacaccggcacagaggctctccagcgtcgagttccacccagagtgc 5294972
Query: 559 gtcaggaacacccccac 575
||||||||||| |||||
Sbjct: 5294971 gtcaggaacacgcccac 5294955
Score = 121 bits (61), Expect = 8e-025
Identities = 175/213 (82%)
Strand = Plus / Minus
Query: 363 ccctttctccccctccatggcctcccgtatgagcgactctacctcgccccgctgtacatc 422
|||||| ||||||||||||||||||||||| |||| | ||||| || || | | ||
Sbjct: 5366830 ccctttttccccctccatggcctcccgtataagcgccgggacctccccttgccgggcctc 5366771
Query: 423 gtcaccgatctcttttccgatgccccactcggtgcacttgtatcggcagttggtctgctg 482
| | |||||||| | |||| ||||||||| || | |||||| |||||||| ||||||||
Sbjct: 5366770 gccgccgatctccatcccgacgccccactccgtccgcttgtaccggcagttcgtctgctg 5366711
Query: 483 ctcggcgaagaagggccagcacagcatgggaacgccgccgcaaatactctccagcgtgga 542
||| |||||||| ||||||| |||||| || ||||| || | ||||||||||| ||
Sbjct: 5366710 ctccgcgaagaacggccagctcagcatcggcacgccagcggcgaggctctccagcgtcga 5366651
Query: 543 gttccacccggagtgcgtcaggaacacccccac 575
||||||||||||||||||||||||||| |||||
Sbjct: 5366650 gttccacccggagtgcgtcaggaacacgcccac 5366618
Score = 121 bits (61), Expect = 8e-025
Identities = 118/137 (86%)
Strand = Plus / Minus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| |||| |||||| |||||||| ||||||||||| |||||||| |||
Sbjct: 5365258 ccgacgccccactccgtgcgcttgtaccggcagttcgtctgctgctccgcgaagaacggc 5365199
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| |||||| || ||||| || | ||||||||||| ||||||||||||||||||
Sbjct: 5365198 cagctcagcatcggcacgcccgcggcgaggctctccagcgtcgagttccacccggagtgc 5365139
Query: 559 gtcaggaacacccccac 575
||||||||||| |||||
Sbjct: 5365138 gtcaggaacacacccac 5365122
Score = 115 bits (58), Expect = 5e-023
Identities = 153/184 (83%), Gaps = 3/184 (1%)
Strand = Plus / Minus
Query: 648 gaactctggcggcagcccggcggagtcgccactcttgacgaggtccgggcgtacgttcca 707
|||||| ||||||||| |||||| |||||| |||||||||||| ||||| ||||||||
Sbjct: 5366545 gaactccggcggcagcacggcggcgtcgcc---cttgacgaggtcggggcgcacgttcca 5366489
Query: 708 taggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgttgga 767
||||| ||||||| ||| || || ||||| |||||||||| ||||||||||| |
Sbjct: 5366488 gaggaacgggtagccgctgtgagcgaggccccaggcgaactcgaggagctgctcgttcgt 5366429
Query: 768 catcaccgtgatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttgag 827
|||||| | |||||| ||| ||||||| ||||| ||||||||||||| ||||||| |||
Sbjct: 5366428 catcacggcgatgctgccgtagttgacgtacacgacggagcgcggcggccggccgtcgag 5366369
Query: 828 ccac 831
||||
Sbjct: 5366368 ccac 5366365
Score = 101 bits (51), Expect = 8e-019
Identities = 126/151 (83%)
Strand = Plus / Minus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| |||||||| ||||| ||||||| ||| ||| || |||||
Sbjct: 5294852 cttgacgaggtcggggcgcacgttccagaggaatgggtagccgctgtgggcgaggcccca 5294793
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
|||||||| | ||||||||||| | |||||| | |||||| ||| ||||||| |||||
Sbjct: 5294792 ggcgaactccaggagctgctcgttcgtcatcacggcgatgctgccgtagttgacgtacac 5294733
Query: 801 aacggagcgcggcgcacggccgttgagccac 831
||||||||||||| ||||||| |||||||
Sbjct: 5294732 gacggagcgcggcggccggccgtcgagccac 5294702
Score = 99.6 bits (50), Expect = 3e-018
Identities = 151/184 (82%), Gaps = 3/184 (1%)
Strand = Plus / Minus
Query: 648 gaactctggcggcagcccggcggagtcgccactcttgacgaggtccgggcgtacgttcca 707
|||||| ||||||||| ||||| |||||| |||||||||||| ||||| ||||||||
Sbjct: 5307481 gaactccggcggcagcatggcggcgtcgcc---cttgacgaggtcggggcgcacgttcca 5307425
Query: 708 taggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgttgga 767
||||| ||||||| ||| || || ||||| |||||||||| ||||||||||| |
Sbjct: 5307424 gaggaacgggtagccgctgtgagcgaggccccaggcgaactcgaggagctgctcgttcgt 5307365
Query: 768 catcaccgtgatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttgag 827
||||| | |||||| ||| ||||||| ||||| ||||||||||||| ||||||| |||
Sbjct: 5307364 gatcacggcgatgctgccgtagttgacgtacacgacggagcgcggcggccggccgtcgag 5307305
Query: 828 ccac 831
||||
Sbjct: 5307304 ccac 5307301
Score = 89.7 bits (45), Expect = 3e-015
Identities = 99/117 (84%)
Strand = Plus / Plus
Query: 459 cttgtatcggcagttggtctgctgctcggcgaagaagggccagcacagcatgggaacgcc 518
|||||| |||||||| ||||||||||| |||||||| |||||| |||||| || |||||
Sbjct: 4634573 cttgtaccggcagttcgtctgctgctccgcgaagaacagccagctcagcatcggcacgcc 4634632
Query: 519 gccgcaaatactctccagcgtggagttccacccggagtgcgtcaggaacacccccac 575
| | ||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 4634633 ggaggcggggctctccagcgtcgagttccacccggagtgcgtcaggaacacacccac 4634689
Score = 87.7 bits (44), Expect = 1e-014
Identities = 123/148 (83%), Gaps = 1/148 (0%)
Strand = Plus / Minus
Query: 685 acgaggtccggg-cgtacgttccataggaagtagtagccggtgttggccagcccccacgc 743
|||||||||||| || |||||||| ||||| ||||||| ||| ||| || ||||| ||
Sbjct: 5365015 acgaggtccggggcgcacgttccagaggaatgggtagccgctgtgggcgaggccccaggc 5364956
Query: 744 gaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacacaac 803
|||||| | ||||||||||| | |||||| | |||||| ||| ||||||| ||||| ||
Sbjct: 5364955 gaactccaggagctgctcgttcgtcatcacggcgatgctgccgtagttgacgtacacgac 5364896
Query: 804 ggagcgcggcgcacggccgttgagccac 831
||||||||||| ||||||| |||||||
Sbjct: 5364895 ggagcgcggcggccggccgtcgagccac 5364868
Score = 73.8 bits (37), Expect = 2e-010
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 978 cgcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcctgcgacatgc 1030
||||||||||||||||||||||||||||| ||||||| |||| |||||||||
Sbjct: 5385305 cgcgtcgagctcgtcgaaggtgttgatgatcaccgcctccgccagcgacatgc 5385357
Score = 71.9 bits (36), Expect = 7e-010
Identities = 105/128 (82%)
Strand = Plus / Plus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| ||| ||| | |||| ||||||| ||| ||| ||||||||
Sbjct: 4655998 cttgacgaggtctgggcggacgacccacacgaaggcgtagccgctgtcggcgagccccca 4656057
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| | |||||||||| | | |||||||| |||||| ||| || | || |||||
Sbjct: 4656058 cgcgaactccagcagctgctcgctcgtcatcaccgcgatgctgccgtagctcacgtacac 4656117
Query: 801 aacggagc 808
|||||||
Sbjct: 4656118 gacggagc 4656125
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 353 gcatctcttgccctttctccccctccatggcctcccgtat 392
||||||| |||||||||||||||||||||||||||||||
Sbjct: 5365344 gcatctcccgccctttctccccctccatggcctcccgtat 5365305
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 353 gcatctcttgccctttctccccctccatggcctcccgtat 392
||||||| |||||||||||||||||||||||||||||||
Sbjct: 5295177 gcatctcccgccctttctccccctccatggcctcccgtat 5295138
Score = 46.1 bits (23), Expect = 0.040
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 362 gccctttctccccctccatggcctcccgtat 392
|||| |||| |||||||||||||||||||||
Sbjct: 4655673 gccccttcttcccctccatggcctcccgtat 4655703
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 214 bits (108), Expect = 8e-053
Identities = 258/308 (83%)
Strand = Plus / Plus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 12731993 acggcgctctccctgagctccgccacgcgccgccgcatctccctccccttctccccgtcc 12732052
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 12732053 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 12732112
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| | ||||||||||||||||||||||||||| |||
Sbjct: 12732113 ccgatcccccactccgtgcgcttgtacctgcagttggtctgctgctcggcgaagaacggc 12732172
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||||||||| || ||||||||||| |||||||| ||||||||
Sbjct: 12732173 cagcacaccatcggcacgccgccggcgatgctctccagcgtcgagttccagccggagtgg 12732232
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 12732233 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 12732292
Query: 619 agcatgct 626
||||||||
Sbjct: 12732293 agcatgct 12732300
Score = 196 bits (99), Expect = 2e-047
Identities = 225/267 (84%)
Strand = Plus / Plus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| | |||||| ||||| ||||||| || ||| ||||||||
Sbjct: 12732361 cttgacgaggtcggggcgcaagttccacaggaacgcgtagccgctgccggcgagccccca 12732420
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 12732421 cgcgaactccgccaggtgctcggccgacatcaccgtgatgctcccgaagttgacgtacac 12732480
Query: 801 aacggagcgcggcgcacggccgttgagccaccggagcggcgcctcctgctccttccacag 860
||||||||||||| ||||||| ||||||||||||| | | ||||||||||||||||
Sbjct: 12732481 cacggagcgcggcggccggccgtccagccaccggagcgcctcgccctgctccttccacag 12732540
Query: 861 gttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtcagctg 920
||||||||| | | ||||| || |||| |||| |||||||| ||||| ||| ||| ||
Sbjct: 12732541 gttggacccgacgccggcgacggggctgtccgccggcacgttgctccgcgccgccaggtg 12732600
Query: 921 gagcgggcccacggtgtagatgggcgg 947
||||||||| ||||||||||| |||||
Sbjct: 12732601 gagcgggccgacggtgtagatcggcgg 12732627
Score = 143 bits (72), Expect = 2e-031
Identities = 144/168 (85%)
Strand = Plus / Minus
Query: 444 gccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggccagca 503
||||||||||||||| |||| |||| ||||||||||||||| |||||||| ||||||||
Sbjct: 19571761 gccccactcggtgcagctgtaccggcggttggtctgctgctccgcgaagaacggccagca 19571702
Query: 504 cagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgcgtcag 563
|||||| || || |||||||| | ||||||| ||| |||||||| ||||||||||||||
Sbjct: 19571701 cagcatcggcaccccgccgcagaggctctccaccgtcgagttccagccggagtgcgtcag 19571642
Query: 564 gaacacccccacggcatcatgctccagcacagctgcctgcgggcacca 611
|||||| ||||| || || ||| |||||| || |||||||||||||
Sbjct: 19571641 gaacacgcccaccgcctcgtgccgcagcaccgcctcctgcgggcacca 19571594
Score = 137 bits (69), Expect = 1e-029
Identities = 174/209 (83%)
Strand = Plus / Minus
Query: 367 ttctccccctccatggcctcccgtatgagcgactctacctcgccccgctgtacatcgtca 426
|||||||||||||||||||||||||| |||| | | ||||| || ||| | | ||| |
Sbjct: 12655124 ttctccccctccatggcctcccgtatcagcgccgccacctcccctcgccgcgcctcgccg 12655065
Query: 427 ccgatctcttttccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcg 486
|||||||| | |||| ||||||||| || | |||||| |||||||| |||||||||||
Sbjct: 12655064 ccgatctccatcccgacgccccactccgtccgcttgtaccggcagttcgtctgctgctcc 12655005
Query: 487 gcgaagaagggccagcacagcatgggaacgccgccgcaaatactctccagcgtggagttc 546
|||||||| ||||||| |||||| || ||||| || | ||||||||||| ||||||
Sbjct: 12655004 gcgaagaacggccagctcagcatcggcacgcccgcggcgaggctctccagcgtcgagttc 12654945
Query: 547 cacccggagtgcgtcaggaacacccccac 575
||||||||||||||||||||||| |||||
Sbjct: 12654944 cacccggagtgcgtcaggaacacgcccac 12654916
Score = 137 bits (69), Expect = 1e-029
Identities = 129/149 (86%)
Strand = Plus / Plus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||||||||||||| || | |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 12003112 ccgatgccccactccgtcctcttgtaccggcagttcgtctgctgctccgcgaagaagggc 12003171
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| |||||| || |||||| || | |||||||| || ||||||||||||||||||
Sbjct: 12003172 cagctcagcatcggcacgccggcggctaggctctccagtgtcgagttccacccggagtgc 12003231
Query: 559 gtcaggaacacccccacggcatcatgctc 587
||||||||||| |||||||| || |||||
Sbjct: 12003232 gtcaggaacacgcccacggcgtcgtgctc 12003260
Score = 129 bits (65), Expect = 3e-027
Identities = 119/137 (86%)
Strand = Plus / Minus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| |||| |||||| |||||||| ||||||||||||||||||||||||
Sbjct: 12642453 ccgacgccccactccgtgcgcttgtaccggcagttcgtctgctgctcggcgaagaagggc 12642394
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| || ||| || || ||| | || | ||||||||||| ||||||||||| ||||||
Sbjct: 12642393 cagctcaacattggcacaccggcacagaggctctccagcgtcgagttccacccagagtgc 12642334
Query: 559 gtcaggaacacccccac 575
||||||||||| |||||
Sbjct: 12642333 gtcaggaacacgcccac 12642317
Score = 121 bits (61), Expect = 8e-025
Identities = 175/213 (82%)
Strand = Plus / Minus
Query: 363 ccctttctccccctccatggcctcccgtatgagcgactctacctcgccccgctgtacatc 422
|||||| ||||||||||||||||||||||| |||| | ||||| || || | | ||
Sbjct: 12714192 ccctttttccccctccatggcctcccgtataagcgccgggacctccccttgccgggcctc 12714133
Query: 423 gtcaccgatctcttttccgatgccccactcggtgcacttgtatcggcagttggtctgctg 482
| | |||||||| | |||| ||||||||| || | |||||| |||||||| ||||||||
Sbjct: 12714132 gccgccgatctccatcccgacgccccactccgtccgcttgtaccggcagttcgtctgctg 12714073
Query: 483 ctcggcgaagaagggccagcacagcatgggaacgccgccgcaaatactctccagcgtgga 542
||| |||||||| ||||||| |||||| || ||||| || | ||||||||||| ||
Sbjct: 12714072 ctccgcgaagaacggccagctcagcatcggcacgccagcggcgaggctctccagcgtcga 12714013
Query: 543 gttccacccggagtgcgtcaggaacacccccac 575
||||||||||||||||||||||||||| |||||
Sbjct: 12714012 gttccacccggagtgcgtcaggaacacgcccac 12713980
Score = 121 bits (61), Expect = 8e-025
Identities = 118/137 (86%)
Strand = Plus / Minus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| |||| |||||| |||||||| ||||||||||| |||||||| |||
Sbjct: 12712620 ccgacgccccactccgtgcgcttgtaccggcagttcgtctgctgctccgcgaagaacggc 12712561
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| |||||| || ||||| || | ||||||||||| ||||||||||||||||||
Sbjct: 12712560 cagctcagcatcggcacgcccgcggcgaggctctccagcgtcgagttccacccggagtgc 12712501
Query: 559 gtcaggaacacccccac 575
||||||||||| |||||
Sbjct: 12712500 gtcaggaacacacccac 12712484
Score = 115 bits (58), Expect = 5e-023
Identities = 153/184 (83%), Gaps = 3/184 (1%)
Strand = Plus / Minus
Query: 648 gaactctggcggcagcccggcggagtcgccactcttgacgaggtccgggcgtacgttcca 707
|||||| ||||||||| |||||| |||||| |||||||||||| ||||| ||||||||
Sbjct: 12713907 gaactccggcggcagcacggcggcgtcgcc---cttgacgaggtcggggcgcacgttcca 12713851
Query: 708 taggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgttgga 767
||||| ||||||| ||| || || ||||| |||||||||| ||||||||||| |
Sbjct: 12713850 gaggaacgggtagccgctgtgagcgaggccccaggcgaactcgaggagctgctcgttcgt 12713791
Query: 768 catcaccgtgatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttgag 827
|||||| | |||||| ||| ||||||| ||||| ||||||||||||| ||||||| |||
Sbjct: 12713790 catcacggcgatgctgccgtagttgacgtacacgacggagcgcggcggccggccgtcgag 12713731
Query: 828 ccac 831
||||
Sbjct: 12713730 ccac 12713727
Score = 101 bits (51), Expect = 8e-019
Identities = 126/151 (83%)
Strand = Plus / Minus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| |||||||| ||||| ||||||| ||| ||| || |||||
Sbjct: 12642214 cttgacgaggtcggggcgcacgttccagaggaatgggtagccgctgtgggcgaggcccca 12642155
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
|||||||| | ||||||||||| | |||||| | |||||| ||| ||||||| |||||
Sbjct: 12642154 ggcgaactccaggagctgctcgttcgtcatcacggcgatgctgccgtagttgacgtacac 12642095
Query: 801 aacggagcgcggcgcacggccgttgagccac 831
||||||||||||| ||||||| |||||||
Sbjct: 12642094 gacggagcgcggcggccggccgtcgagccac 12642064
Score = 99.6 bits (50), Expect = 3e-018
Identities = 151/184 (82%), Gaps = 3/184 (1%)
Strand = Plus / Minus
Query: 648 gaactctggcggcagcccggcggagtcgccactcttgacgaggtccgggcgtacgttcca 707
|||||| ||||||||| ||||| |||||| |||||||||||| ||||| ||||||||
Sbjct: 12654843 gaactccggcggcagcatggcggcgtcgcc---cttgacgaggtcggggcgcacgttcca 12654787
Query: 708 taggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgttgga 767
||||| ||||||| ||| || || ||||| |||||||||| ||||||||||| |
Sbjct: 12654786 gaggaacgggtagccgctgtgagcgaggccccaggcgaactcgaggagctgctcgttcgt 12654727
Query: 768 catcaccgtgatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttgag 827
||||| | |||||| ||| ||||||| ||||| ||||||||||||| ||||||| |||
Sbjct: 12654726 gatcacggcgatgctgccgtagttgacgtacacgacggagcgcggcggccggccgtcgag 12654667
Query: 828 ccac 831
||||
Sbjct: 12654666 ccac 12654663
Score = 89.7 bits (45), Expect = 3e-015
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 687 gaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcccccacgcgaa 746
|||||| ||||| ||| |||| ||||||| || |||| ||||||| ||||||||||||||
Sbjct: 19571521 gaggtcggggcggacgatccacaggaagtcgtggccgctgttggcgagcccccacgcgaa 19571462
Query: 747 ctcgaccagctgctcgttggacatcaccgtgatgctcccgaagtt 791
||| ||||||| |||||| | ||||||||||| ||| ||| ||||
Sbjct: 19571461 ctcaaccagctcctcgttcgtcatcaccgtgacgctgccgtagtt 19571417
Score = 89.7 bits (45), Expect = 3e-015
Identities = 99/117 (84%)
Strand = Plus / Plus
Query: 459 cttgtatcggcagttggtctgctgctcggcgaagaagggccagcacagcatgggaacgcc 518
|||||| |||||||| ||||||||||| |||||||| |||||| |||||| || |||||
Sbjct: 11981935 cttgtaccggcagttcgtctgctgctccgcgaagaacagccagctcagcatcggcacgcc 11981994
Query: 519 gccgcaaatactctccagcgtggagttccacccggagtgcgtcaggaacacccccac 575
| | ||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 11981995 ggaggcggggctctccagcgtcgagttccacccggagtgcgtcaggaacacacccac 11982051
Score = 87.7 bits (44), Expect = 1e-014
Identities = 123/148 (83%), Gaps = 1/148 (0%)
Strand = Plus / Minus
Query: 685 acgaggtccggg-cgtacgttccataggaagtagtagccggtgttggccagcccccacgc 743
|||||||||||| || |||||||| ||||| ||||||| ||| ||| || ||||| ||
Sbjct: 12712377 acgaggtccggggcgcacgttccagaggaatgggtagccgctgtgggcgaggccccaggc 12712318
Query: 744 gaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacacaac 803
|||||| | ||||||||||| | |||||| | |||||| ||| ||||||| ||||| ||
Sbjct: 12712317 gaactccaggagctgctcgttcgtcatcacggcgatgctgccgtagttgacgtacacgac 12712258
Query: 804 ggagcgcggcgcacggccgttgagccac 831
||||||||||| ||||||| |||||||
Sbjct: 12712257 ggagcgcggcggccggccgtcgagccac 12712230
Score = 73.8 bits (37), Expect = 2e-010
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 978 cgcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcctgcgacatgc 1030
||||||||||||||||||||||||||||| ||||||| |||| |||||||||
Sbjct: 12732667 cgcgtcgagctcgtcgaaggtgttgatgatcaccgcctccgccagcgacatgc 12732719
Score = 71.9 bits (36), Expect = 7e-010
Identities = 105/128 (82%)
Strand = Plus / Plus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| ||| ||| | |||| ||||||| ||| ||| ||||||||
Sbjct: 12003360 cttgacgaggtctgggcggacgacccacacgaaggcgtagccgctgtcggcgagccccca 12003419
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| | |||||||||| | | |||||||| |||||| ||| || | || |||||
Sbjct: 12003420 cgcgaactccagcagctgctcgctcgtcatcaccgcgatgctgccgtagctcacgtacac 12003479
Query: 801 aacggagc 808
|||||||
Sbjct: 12003480 gacggagc 12003487
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 353 gcatctcttgccctttctccccctccatggcctcccgtat 392
||||||| |||||||||||||||||||||||||||||||
Sbjct: 12712706 gcatctcccgccctttctccccctccatggcctcccgtat 12712667
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 353 gcatctcttgccctttctccccctccatggcctcccgtat 392
||||||| |||||||||||||||||||||||||||||||
Sbjct: 12642539 gcatctcccgccctttctccccctccatggcctcccgtat 12642500
Score = 46.1 bits (23), Expect = 0.040
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 362 gccctttctccccctccatggcctcccgtat 392
|||| |||| |||||||||||||||||||||
Sbjct: 12003035 gccccttcttcccctccatggcctcccgtat 12003065
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 982 tcgagctcgtcgaaggtgttga 1003
||||||||||||||||||||||
Sbjct: 19571217 tcgagctcgtcgaaggtgttga 19571196
>emb|AL606443.3|OSJN00008 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026L04,
complete sequence
Length = 129563
Score = 214 bits (108), Expect = 8e-053
Identities = 258/308 (83%)
Strand = Plus / Plus
Query: 319 acggcgctgtccctgagttcagtcacgcgccggagcatctcttgccctttctccccctcc 378
|||||||| |||||||| || | ||||||||| ||||||| ||| |||||||| |||
Sbjct: 125375 acggcgctctccctgagctccgccacgcgccgccgcatctccctccccttctccccgtcc 125434
Query: 379 atggcctcccgtatgagcgactctacctcgccccgctgtacatcgtcaccgatctctttt 438
|||||||||||||| |||| ||| |||||||| ||| | || ||||| ||||||
Sbjct: 125435 atggcctcccgtatcagcgcctccacctcgccgcgccgcacgtcgtcggggatctccgcc 125494
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
||||| |||||||| |||| |||||| | ||||||||||||||||||||||||||| |||
Sbjct: 125495 ccgatcccccactccgtgcgcttgtacctgcagttggtctgctgctcggcgaagaacggc 125554
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
||||||| ||| || ||||||||| || ||||||||||| |||||||| ||||||||
Sbjct: 125555 cagcacaccatcggcacgccgccggcgatgctctccagcgtcgagttccagccggagtgg 125614
Query: 559 gtcaggaacacccccacggcatcatgctccagcacagctgcctgcgggcaccacgtagac 618
|| |||||||||||||| || || ||||||||||| | ||||||||||||||||| | |
Sbjct: 125615 gtgaggaacacccccaccgcctcgtgctccagcacctccgcctgcgggcaccacgtcgtc 125674
Query: 619 agcatgct 626
||||||||
Sbjct: 125675 agcatgct 125682
Score = 204 bits (103), Expect = 7e-050
Identities = 226/267 (84%)
Strand = Plus / Plus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| | |||||| ||||| ||||||| || ||| ||||||||
Sbjct: 125743 cttgacgaggtcggggcgcaagttccacaggaacgcgtagccgctgccggcgagccccca 125802
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| |||| |||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 125803 cgcgaactccgccaggtgctcggccgacatcaccgtgatgctcccgaagttgacgtacac 125862
Query: 801 aacggagcgcggcgcacggccgttgagccaccggagcggcgcctcctgctccttccacag 860
||||||||||||| ||||||| ||||||||||||| | | ||||||||||||||||
Sbjct: 125863 cacggagcgcggcggccggccgtccagccaccggagcgcctcgccctgctccttccacag 125922
Query: 861 gttggacccaatagcagcgacaggactgttcgcctgcacgttgttccgcaccgtcagctg 920
||||||||| | | | ||||| || |||| |||| |||||||| ||||| ||| ||| ||
Sbjct: 125923 gttggacccgacaccggcgacggggctgtccgccggcacgttgctccgcgccgccaggtg 125982
Query: 921 gagcgggcccacggtgtagatgggcgg 947
||||||||| ||||||||||| |||||
Sbjct: 125983 gagcgggccgacggtgtagatcggcgg 126009
Score = 137 bits (69), Expect = 1e-029
Identities = 174/209 (83%)
Strand = Plus / Minus
Query: 367 ttctccccctccatggcctcccgtatgagcgactctacctcgccccgctgtacatcgtca 426
|||||||||||||||||||||||||| |||| | | ||||| || ||| | | ||| |
Sbjct: 76574 ttctccccctccatggcctcccgtatcagcgccgccacctcccctcgccgcgcctcgccg 76515
Query: 427 ccgatctcttttccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcg 486
|||||||| | |||| ||||||||| || | |||||| |||||||| |||||||||||
Sbjct: 76514 ccgatctccatcccgacgccccactccgtccgcttgtaccggcagttcgtctgctgctcc 76455
Query: 487 gcgaagaagggccagcacagcatgggaacgccgccgcaaatactctccagcgtggagttc 546
|||||||| ||||||| |||||| || ||||| || | ||||||||||| ||||||
Sbjct: 76454 gcgaagaacggccagctcagcatcggcacgccagcggcgaggctctccagcgtcgagttc 76395
Query: 547 cacccggagtgcgtcaggaacacccccac 575
||||||||||||||||||||||| |||||
Sbjct: 76394 cacccggagtgcgtcaggaacacgcccac 76366
Score = 129 bits (65), Expect = 3e-027
Identities = 119/137 (86%)
Strand = Plus / Minus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| |||| |||||| |||||||| ||||||||||||||||||||||||
Sbjct: 63973 ccgacgccccactccgtgcgcttgtaccggcagttcgtctgctgctcggcgaagaagggc 63914
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| || ||| || || ||| | || | ||||||||||| ||||||||||| ||||||
Sbjct: 63913 cagctcaacattggcacaccggcacagaggctctccagcgtcgagttccacccagagtgc 63854
Query: 559 gtcaggaacacccccac 575
||||||||||| |||||
Sbjct: 63853 gtcaggaacacgcccac 63837
Score = 117 bits (59), Expect = 1e-023
Identities = 122/143 (85%)
Strand = Plus / Minus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| |||||||| ||||| ||||||| ||| ||| || |||||
Sbjct: 63734 cttgacgaggtcggggcgcacgttccagaggaacgggtagccgctgtgggcgaggcccca 63675
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| | |||||||||||| | |||||| |||||||| ||| ||||||| |||||
Sbjct: 63674 cgcgaactccagcagctgctcgttcgtcatcacggtgatgctgccgtagttgacgtacac 63615
Query: 801 aacggagcgcggcgcacggccgt 823
||||||||||||| |||||||
Sbjct: 63614 gacggagcgcggcggccggccgt 63592
Score = 115 bits (58), Expect = 5e-023
Identities = 153/184 (83%), Gaps = 3/184 (1%)
Strand = Plus / Minus
Query: 648 gaactctggcggcagcccggcggagtcgccactcttgacgaggtccgggcgtacgttcca 707
|||||| ||||||||| |||||| |||||| |||||||||||| ||||| ||||||||
Sbjct: 76293 gaactccggcggcagcacggcggcgtcgcc---cttgacgaggtcggggcgcacgttcca 76237
Query: 708 taggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgttgga 767
||||| ||||||| ||| || || ||||| |||||||||| ||||||||||| |
Sbjct: 76236 gaggaacgggtagccgctgtgagcgaggccccaggcgaactcgaggagctgctcgttcgt 76177
Query: 768 catcaccgtgatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttgag 827
|||||| | |||||| ||| ||||||| ||||| ||||||||||||| ||||||| |||
Sbjct: 76176 catcacggcgatgctgccgtagttgacgtacacgacggagcgcggcggccggccgtcgag 76117
Query: 828 ccac 831
||||
Sbjct: 76116 ccac 76113
Score = 73.8 bits (37), Expect = 2e-010
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 978 cgcgtcgagctcgtcgaaggtgttgatgaccaccgccgacgcctgcgacatgc 1030
||||||||||||||||||||||||||||| ||||||| |||| |||||||||
Sbjct: 126049 cgcgtcgagctcgtcgaaggtgttgatgatcaccgcctccgccagcgacatgc 126101
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 353 gcatctcttgccctttctccccctccatggcctcccgtat 392
||||||| |||||||||||||||||||||||||||||||
Sbjct: 64059 gcatctcccgccctttctccccctccatggcctcccgtat 64020
>dbj|AK061024.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F02, full
insert sequence
Length = 1647
Score = 143 bits (72), Expect = 2e-031
Identities = 144/168 (85%)
Strand = Plus / Minus
Query: 444 gccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggccagca 503
||||||||||||||| |||| |||| ||||||||||||||| |||||||| ||||||||
Sbjct: 1348 gccccactcggtgcagctgtaccggcggttggtctgctgctccgcgaagaacggccagca 1289
Query: 504 cagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgcgtcag 563
|||||| || || |||||||| | ||||||| ||| |||||||| ||||||||||||||
Sbjct: 1288 cagcatcggcaccccgccgcagaggctctccaccgtcgagttccagccggagtgcgtcag 1229
Query: 564 gaacacccccacggcatcatgctccagcacagctgcctgcgggcacca 611
|||||| ||||| || || ||| |||||| || |||||||||||||
Sbjct: 1228 gaacacgcccaccgcctcgtgccgcagcaccgcctcctgcgggcacca 1181
Score = 89.7 bits (45), Expect = 3e-015
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 687 gaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcccccacgcgaa 746
|||||| ||||| ||| |||| ||||||| || |||| ||||||| ||||||||||||||
Sbjct: 1108 gaggtcggggcggacgatccacaggaagtcgtggccgctgttggcgagcccccacgcgaa 1049
Query: 747 ctcgaccagctgctcgttggacatcaccgtgatgctcccgaagtt 791
||| ||||||| |||||| | ||||||||||| ||| ||| ||||
Sbjct: 1048 ctcaaccagctcctcgttcgtcatcaccgtgacgctgccgtagtt 1004
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 982 tcgagctcgtcgaaggtgttga 1003
||||||||||||||||||||||
Sbjct: 804 tcgagctcgtcgaaggtgttga 783
>dbj|AK068176.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132G13, full
insert sequence
Length = 1759
Score = 143 bits (72), Expect = 2e-031
Identities = 144/168 (85%)
Strand = Plus / Minus
Query: 444 gccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggccagca 503
||||||||||||||| |||| |||| ||||||||||||||| |||||||| ||||||||
Sbjct: 1413 gccccactcggtgcagctgtaccggcggttggtctgctgctccgcgaagaatggccagca 1354
Query: 504 cagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgcgtcag 563
|||||| || || |||||||| | ||||||| ||| |||||||| ||||||||||||||
Sbjct: 1353 cagcatcggcaccccgccgcagaggctctccaccgtcgagttccagccggagtgcgtcag 1294
Query: 564 gaacacccccacggcatcatgctccagcacagctgcctgcgggcacca 611
|||||| ||||| || || ||| |||||| || |||||||||||||
Sbjct: 1293 gaacacgcccaccgcctcgtgccgcagcaccgcctcctgcgggcacca 1246
Score = 89.7 bits (45), Expect = 3e-015
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 687 gaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcccccacgcgaa 746
|||||| ||||| ||| |||| ||||||| || |||| ||||||| ||||||||||||||
Sbjct: 1173 gaggtcggggcggacgatccacaggaagtcgtggccgctgttggcgagcccccacgcgaa 1114
Query: 747 ctcgaccagctgctcgttggacatcaccgtgatgctcccgaagtt 791
||| ||||||| |||||| | ||||||||||| ||| ||| ||||
Sbjct: 1113 ctcaaccagctcctcgttcgtcatcaccgtgacgctgccgtagtt 1069
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 982 tcgagctcgtcgaaggtgttga 1003
||||||||||||||||||||||
Sbjct: 869 tcgagctcgtcgaaggtgttga 848
>gb|AACV01009869.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009869,
whole genome shotgun sequence
Length = 30627
Score = 143 bits (72), Expect = 2e-031
Identities = 144/168 (85%)
Strand = Plus / Plus
Query: 444 gccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggccagca 503
||||||||||||||| |||| |||| ||||||||||||||| |||||||| ||||||||
Sbjct: 655 gccccactcggtgcagctgtaccggcggttggtctgctgctccgcgaagaacggccagca 714
Query: 504 cagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgcgtcag 563
|||||| || || |||||||| | ||||||| ||| |||||||| ||||||||||||||
Sbjct: 715 cagcatcggcaccccgccgcagaggctctccaccgtcgagttccagccggagtgcgtcag 774
Query: 564 gaacacccccacggcatcatgctccagcacagctgcctgcgggcacca 611
|||||| ||||| || || ||| |||||| || |||||||||||||
Sbjct: 775 gaacacgcccaccgcctcgtgccgcagcaccgcctcctgcgggcacca 822
Score = 89.7 bits (45), Expect = 3e-015
Identities = 90/105 (85%)
Strand = Plus / Plus
Query: 687 gaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcccccacgcgaa 746
|||||| ||||| ||| |||| ||||||| || |||| ||||||| ||||||||||||||
Sbjct: 895 gaggtcggggcggacgatccacaggaagtcgtggccgctgttggcgagcccccacgcgaa 954
Query: 747 ctcgaccagctgctcgttggacatcaccgtgatgctcccgaagtt 791
||| ||||||| |||||| | ||||||||||| ||| ||| ||||
Sbjct: 955 ctcaaccagctcctcgttcgtcatcaccgtgacgctgccgtagtt 999
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 982 tcgagctcgtcgaaggtgttga 1003
||||||||||||||||||||||
Sbjct: 1199 tcgagctcgtcgaaggtgttga 1220
>ref|XM_472671.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1476
Score = 143 bits (72), Expect = 2e-031
Identities = 144/168 (85%)
Strand = Plus / Minus
Query: 444 gccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggccagca 503
||||||||||||||| |||| |||| ||||||||||||||| |||||||| ||||||||
Sbjct: 1263 gccccactcggtgcagctgtaccggcggttggtctgctgctccgcgaagaacggccagca 1204
Query: 504 cagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgcgtcag 563
|||||| || || |||||||| | ||||||| ||| |||||||| ||||||||||||||
Sbjct: 1203 cagcatcggcaccccgccgcagaggctctccaccgtcgagttccagccggagtgcgtcag 1144
Query: 564 gaacacccccacggcatcatgctccagcacagctgcctgcgggcacca 611
|||||| ||||| || || ||| |||||| || |||||||||||||
Sbjct: 1143 gaacacgcccaccgcctcgtgccgcagcaccgcctcctgcgggcacca 1096
Score = 89.7 bits (45), Expect = 3e-015
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 687 gaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcccccacgcgaa 746
|||||| ||||| ||| |||| ||||||| || |||| ||||||| ||||||||||||||
Sbjct: 1023 gaggtcggggcggacgatccacaggaagtcgtggccgctgttggcgagcccccacgcgaa 964
Query: 747 ctcgaccagctgctcgttggacatcaccgtgatgctcccgaagtt 791
||| ||||||| |||||| | ||||||||||| ||| ||| ||||
Sbjct: 963 ctcaaccagctcctcgttcgtcatcaccgtgacgctgccgtagtt 919
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 982 tcgagctcgtcgaaggtgttga 1003
||||||||||||||||||||||
Sbjct: 719 tcgagctcgtcgaaggtgttga 698
>ref|NT_079863.2| Oryza sativa (japonica cultivar-group)
Length = 2656602
Score = 143 bits (72), Expect = 2e-031
Identities = 144/168 (85%)
Strand = Plus / Minus
Query: 444 gccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggccagca 503
||||||||||||||| |||| |||| ||||||||||||||| |||||||| ||||||||
Sbjct: 61310 gccccactcggtgcagctgtaccggcggttggtctgctgctccgcgaagaacggccagca 61251
Query: 504 cagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgcgtcag 563
|||||| || || |||||||| | ||||||| ||| |||||||| ||||||||||||||
Sbjct: 61250 cagcatcggcaccccgccgcagaggctctccaccgtcgagttccagccggagtgcgtcag 61191
Query: 564 gaacacccccacggcatcatgctccagcacagctgcctgcgggcacca 611
|||||| ||||| || || ||| |||||| || |||||||||||||
Sbjct: 61190 gaacacgcccaccgcctcgtgccgcagcaccgcctcctgcgggcacca 61143
Score = 89.7 bits (45), Expect = 3e-015
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 687 gaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcccccacgcgaa 746
|||||| ||||| ||| |||| ||||||| || |||| ||||||| ||||||||||||||
Sbjct: 61070 gaggtcggggcggacgatccacaggaagtcgtggccgctgttggcgagcccccacgcgaa 61011
Query: 747 ctcgaccagctgctcgttggacatcaccgtgatgctcccgaagtt 791
||| ||||||| |||||| | ||||||||||| ||| ||| ||||
Sbjct: 61010 ctcaaccagctcctcgttcgtcatcaccgtgacgctgccgtagtt 60966
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 982 tcgagctcgtcgaaggtgttga 1003
||||||||||||||||||||||
Sbjct: 60766 tcgagctcgtcgaaggtgttga 60745
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027
genomic scaffold, whole genome shotgun sequence
Length = 13167135
Score = 143 bits (72), Expect = 2e-031
Identities = 144/168 (85%)
Strand = Plus / Minus
Query: 444 gccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggccagca 503
||||||||||||||| |||| |||| ||||||||||||||| |||||||| ||||||||
Sbjct: 427662 gccccactcggtgcagctgtaccggcggttggtctgctgctccgcgaagaacggccagca 427603
Query: 504 cagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgcgtcag 563
|||||| || || |||||||| | ||||||| ||| |||||||| ||||||||||||||
Sbjct: 427602 cagcatcggcaccccgccgcagaggctctccaccgtcgagttccagccggagtgcgtcag 427543
Query: 564 gaacacccccacggcatcatgctccagcacagctgcctgcgggcacca 611
|||||| ||||| || || ||| |||||| || |||||||||||||
Sbjct: 427542 gaacacgcccaccgcctcgtgccgcagcaccgcctcctgcgggcacca 427495
Score = 89.7 bits (45), Expect = 3e-015
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 687 gaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcccccacgcgaa 746
|||||| ||||| ||| |||| ||||||| || |||| ||||||| ||||||||||||||
Sbjct: 427422 gaggtcggggcggacgatccacaggaagtcgtggccgctgttggcgagcccccacgcgaa 427363
Query: 747 ctcgaccagctgctcgttggacatcaccgtgatgctcccgaagtt 791
||| ||||||| |||||| | ||||||||||| ||| ||| ||||
Sbjct: 427362 ctcaaccagctcctcgttcgtcatcaccgtgacgctgccgtagtt 427318
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 982 tcgagctcgtcgaaggtgttga 1003
||||||||||||||||||||||
Sbjct: 427118 tcgagctcgtcgaaggtgttga 427097
>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14,
complete sequence
Length = 175698
Score = 143 bits (72), Expect = 2e-031
Identities = 144/168 (85%)
Strand = Plus / Minus
Query: 444 gccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggccagca 503
||||||||||||||| |||| |||| ||||||||||||||| |||||||| ||||||||
Sbjct: 61310 gccccactcggtgcagctgtaccggcggttggtctgctgctccgcgaagaacggccagca 61251
Query: 504 cagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgcgtcag 563
|||||| || || |||||||| | ||||||| ||| |||||||| ||||||||||||||
Sbjct: 61250 cagcatcggcaccccgccgcagaggctctccaccgtcgagttccagccggagtgcgtcag 61191
Query: 564 gaacacccccacggcatcatgctccagcacagctgcctgcgggcacca 611
|||||| ||||| || || ||| |||||| || |||||||||||||
Sbjct: 61190 gaacacgcccaccgcctcgtgccgcagcaccgcctcctgcgggcacca 61143
Score = 89.7 bits (45), Expect = 3e-015
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 687 gaggtccgggcgtacgttccataggaagtagtagccggtgttggccagcccccacgcgaa 746
|||||| ||||| ||| |||| ||||||| || |||| ||||||| ||||||||||||||
Sbjct: 61070 gaggtcggggcggacgatccacaggaagtcgtggccgctgttggcgagcccccacgcgaa 61011
Query: 747 ctcgaccagctgctcgttggacatcaccgtgatgctcccgaagtt 791
||| ||||||| |||||| | ||||||||||| ||| ||| ||||
Sbjct: 61010 ctcaaccagctcctcgttcgtcatcaccgtgacgctgccgtagtt 60966
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 982 tcgagctcgtcgaaggtgttga 1003
||||||||||||||||||||||
Sbjct: 60766 tcgagctcgtcgaaggtgttga 60745
>dbj|AK106366.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-B11, full
insert sequence
Length = 1457
Score = 137 bits (69), Expect = 1e-029
Identities = 129/149 (86%)
Strand = Plus / Plus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||||||||||||| || | |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 72 ccgatgccccactccgtcctcttgtaccggcagttcgtctgctgctccgcgaagaagggc 131
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| |||||| || |||||| || | |||||||| || ||||||||||||||||||
Sbjct: 132 cagctcagcatcggcacgccggcggctaggctctccagtgtcgagttccacccggagtgc 191
Query: 559 gtcaggaacacccccacggcatcatgctc 587
||||||||||| |||||||| || |||||
Sbjct: 192 gtcaggaacacgcccacggcgtcgtgctc 220
Score = 71.9 bits (36), Expect = 7e-010
Identities = 105/128 (82%)
Strand = Plus / Plus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| ||| ||| | |||| ||||||| ||| ||| ||||||||
Sbjct: 320 cttgacgaggtctgggcggacgacccacacgaaggcgtagccgctgtcggcgagccccca 379
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| | |||||||||| | | |||||||| |||||| ||| || | || |||||
Sbjct: 380 cgcgaactccagcagctgctcgctcgtcatcaccgcgatgctgccgtagctcacgtacac 439
Query: 801 aacggagc 808
|||||||
Sbjct: 440 gacggagc 447
>gb|AACV01009281.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009281, whole
genome shotgun sequence
Length = 17029
Score = 137 bits (69), Expect = 1e-029
Identities = 129/149 (86%)
Strand = Plus / Minus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||||||||||||| || | |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 14226 ccgatgccccactccgtcctcttgtaccggcagttcgtctgctgctccgcgaagaagggc 14167
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| |||||| || |||||| || | |||||||| || ||||||||||||||||||
Sbjct: 14166 cagctcagcatcggcacgccggcggctaggctctccagtgtcgagttccacccggagtgc 14107
Query: 559 gtcaggaacacccccacggcatcatgctc 587
||||||||||| |||||||| || |||||
Sbjct: 14106 gtcaggaacacgcccacggcgtcgtgctc 14078
Score = 71.9 bits (36), Expect = 7e-010
Identities = 105/128 (82%)
Strand = Plus / Minus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| ||| ||| | |||| ||||||| ||| ||| ||||||||
Sbjct: 13978 cttgacgaggtctgggcggacgacccacacgaaggcgtagccgctgtcggcgagccccca 13919
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| | |||||||||| | | |||||||| |||||| ||| || | || |||||
Sbjct: 13918 cgcgaactccagcagctgctcgctcgtcatcaccgcgatgctgccgtagctcacgtacac 13859
Query: 801 aacggagc 808
|||||||
Sbjct: 13858 gacggagc 13851
Score = 46.1 bits (23), Expect = 0.040
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 362 gccctttctccccctccatggcctcccgtat 392
|||| |||| |||||||||||||||||||||
Sbjct: 14303 gccccttcttcccctccatggcctcccgtat 14273
>gb|AACV01009340.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009340, whole
genome shotgun sequence
Length = 70964
Score = 137 bits (69), Expect = 1e-029
Identities = 174/209 (83%)
Strand = Plus / Minus
Query: 367 ttctccccctccatggcctcccgtatgagcgactctacctcgccccgctgtacatcgtca 426
|||||||||||||||||||||||||| |||| | | ||||| || ||| | | ||| |
Sbjct: 23333 ttctccccctccatggcctcccgtatcagcgccgccacctcccctcgccgcgcctcgccg 23274
Query: 427 ccgatctcttttccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcg 486
|||||||| | |||| ||||||||| || | |||||| |||||||| |||||||||||
Sbjct: 23273 ccgatctccatcccgacgccccactccgtccgcttgtaccggcagttcgtctgctgctcc 23214
Query: 487 gcgaagaagggccagcacagcatgggaacgccgccgcaaatactctccagcgtggagttc 546
|||||||| ||||||| |||||| || ||||| || | ||||||||||| ||||||
Sbjct: 23213 gcgaagaacggccagctcagcatcggcacgcccgcggcgaggctctccagcgtcgagttc 23154
Query: 547 cacccggagtgcgtcaggaacacccccac 575
||||||||||||||||||||||| |||||
Sbjct: 23153 cacccggagtgcgtcaggaacacgcccac 23125
Score = 129 bits (65), Expect = 3e-027
Identities = 119/137 (86%)
Strand = Plus / Minus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| |||| |||||| |||||||| ||||||||||||||||||||||||
Sbjct: 10662 ccgacgccccactccgtgcgcttgtaccggcagttcgtctgctgctcggcgaagaagggc 10603
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| || ||| || || ||| | || | ||||||||||| ||||||||||| ||||||
Sbjct: 10602 cagctcaacattggcacaccggcacagaggctctccagcgtcgagttccacccagagtgc 10543
Query: 559 gtcaggaacacccccac 575
||||||||||| |||||
Sbjct: 10542 gtcaggaacacgcccac 10526
Score = 101 bits (51), Expect = 8e-019
Identities = 126/151 (83%)
Strand = Plus / Minus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| |||||||| ||||| ||||||| ||| ||| || |||||
Sbjct: 10423 cttgacgaggtcggggcgcacgttccagaggaatgggtagccgctgtgggcgaggcccca 10364
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
|||||||| | ||||||||||| | |||||| | |||||| ||| ||||||| |||||
Sbjct: 10363 ggcgaactccaggagctgctcgttcgtcatcacggcgatgctgccgtagttgacgtacac 10304
Query: 801 aacggagcgcggcgcacggccgttgagccac 831
||||||||||||| ||||||| |||||||
Sbjct: 10303 gacggagcgcggcggccggccgtcgagccac 10273
Score = 99.6 bits (50), Expect = 3e-018
Identities = 151/184 (82%), Gaps = 3/184 (1%)
Strand = Plus / Minus
Query: 648 gaactctggcggcagcccggcggagtcgccactcttgacgaggtccgggcgtacgttcca 707
|||||| ||||||||| ||||| |||||| |||||||||||| ||||| ||||||||
Sbjct: 23052 gaactccggcggcagcatggcggcgtcgcc---cttgacgaggtcggggcgcacgttcca 22996
Query: 708 taggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgttgga 767
||||| ||||||| ||| || || ||||| |||||||||| ||||||||||| |
Sbjct: 22995 gaggaacgggtagccgctgtgagcgaggccccaggcgaactcgaggagctgctcgttcgt 22936
Query: 768 catcaccgtgatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttgag 827
||||| | |||||| ||| ||||||| ||||| ||||||||||||| ||||||| |||
Sbjct: 22935 gatcacggcgatgctgccgtagttgacgtacacgacggagcgcggcggccggccgtcgag 22876
Query: 828 ccac 831
||||
Sbjct: 22875 ccac 22872
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 353 gcatctcttgccctttctccccctccatggcctcccgtat 392
||||||| |||||||||||||||||||||||||||||||
Sbjct: 10748 gcatctcccgccctttctccccctccatggcctcccgtat 10709
>ref|XM_471795.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1473
Score = 137 bits (69), Expect = 1e-029
Identities = 129/149 (86%)
Strand = Plus / Minus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||||||||||||| || | |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 1241 ccgatgccccactccgtcctcttgtaccggcagttcgtctgctgctccgcgaagaagggc 1182
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| |||||| || |||||| || | |||||||| || ||||||||||||||||||
Sbjct: 1181 cagctcagcatcggcacgccggcggctaggctctccagtgtcgagttccacccggagtgc 1122
Query: 559 gtcaggaacacccccacggcatcatgctc 587
||||||||||| |||||||| || |||||
Sbjct: 1121 gtcaggaacacgcccacggcgtcgtgctc 1093
Score = 71.9 bits (36), Expect = 7e-010
Identities = 105/128 (82%)
Strand = Plus / Minus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| ||| ||| | |||| ||||||| ||| ||| ||||||||
Sbjct: 993 cttgacgaggtctgggcggacgacccacacgaaggcgtagccgctgtcggcgagccccca 934
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| | |||||||||| | | |||||||| |||||| ||| || | || |||||
Sbjct: 933 cgcgaactccagcagctgctcgctcgtcatcaccgcgatgctgccgtagctcacgtacac 874
Query: 801 aacggagc 808
|||||||
Sbjct: 873 gacggagc 866
Score = 46.1 bits (23), Expect = 0.040
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 362 gccctttctccccctccatggcctcccgtat 392
|||| |||| |||||||||||||||||||||
Sbjct: 1318 gccccttcttcccctccatggcctcccgtat 1288
>ref|XM_471823.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1491
Score = 137 bits (69), Expect = 1e-029
Identities = 174/209 (83%)
Strand = Plus / Minus
Query: 367 ttctccccctccatggcctcccgtatgagcgactctacctcgccccgctgtacatcgtca 426
|||||||||||||||||||||||||| |||| | | ||||| || ||| | | ||| |
Sbjct: 1340 ttctccccctccatggcctcccgtatcagcgccgccacctcccctcgccgcgcctcgccg 1281
Query: 427 ccgatctcttttccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcg 486
|||||||| | |||| ||||||||| || | |||||| |||||||| |||||||||||
Sbjct: 1280 ccgatctccatcccgacgccccactccgtccgcttgtaccggcagttcgtctgctgctcc 1221
Query: 487 gcgaagaagggccagcacagcatgggaacgccgccgcaaatactctccagcgtggagttc 546
|||||||| ||||||| |||||| || ||||| || | ||||||||||| ||||||
Sbjct: 1220 gcgaagaacggccagctcagcatcggcacgccagcggcgaggctctccagcgtcgagttc 1161
Query: 547 cacccggagtgcgtcaggaacacccccac 575
||||||||||||||||||||||| |||||
Sbjct: 1160 cacccggagtgcgtcaggaacacgcccac 1132
Score = 115 bits (58), Expect = 5e-023
Identities = 153/184 (83%), Gaps = 3/184 (1%)
Strand = Plus / Minus
Query: 648 gaactctggcggcagcccggcggagtcgccactcttgacgaggtccgggcgtacgttcca 707
|||||| ||||||||| |||||| |||||| |||||||||||| ||||| ||||||||
Sbjct: 1059 gaactccggcggcagcacggcggcgtcgcc---cttgacgaggtcggggcgcacgttcca 1003
Query: 708 taggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgttgga 767
||||| ||||||| ||| || || ||||| |||||||||| ||||||||||| |
Sbjct: 1002 gaggaacgggtagccgctgtgagcgaggccccaggcgaactcgaggagctgctcgttcgt 943
Query: 768 catcaccgtgatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttgag 827
|||||| | |||||| ||| ||||||| ||||| ||||||||||||| ||||||| |||
Sbjct: 942 catcacggcgatgctgccgtagttgacgtacacgacggagcgcggcggccggccgtcgag 883
Query: 828 ccac 831
||||
Sbjct: 882 ccac 879
>ref|XM_471848.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1512
Score = 137 bits (69), Expect = 1e-029
Identities = 129/149 (86%)
Strand = Plus / Minus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||||||||||||| || | |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 1280 ccgatgccccactccgtcctcttgtaccggcagttcgtctgctgctccgcgaagaagggc 1221
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| |||||| || |||||| || | |||||||| || ||||||||||||||||||
Sbjct: 1220 cagctcagcatcggcacgccggcggctaggctctccagtgtcgagttccacccggagtgc 1161
Query: 559 gtcaggaacacccccacggcatcatgctc 587
||||||||||| |||||||| || |||||
Sbjct: 1160 gtcaggaacacgcccacggcgtcgtgctc 1132
Score = 71.9 bits (36), Expect = 7e-010
Identities = 105/128 (82%)
Strand = Plus / Minus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| ||| ||| | |||| ||||||| ||| ||| ||||||||
Sbjct: 1032 cttgacgaggtctgggcggacgacccacacgaaggcgtagccgctgtcggcgagccccca 973
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| | |||||||||| | | |||||||| |||||| ||| || | || |||||
Sbjct: 972 cgcgaactccagcagctgctcgctcgtcatcaccgcgatgctgccgtagctcacgtacac 913
Query: 801 aacggagc 808
|||||||
Sbjct: 912 gacggagc 905
Score = 46.1 bits (23), Expect = 0.040
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 362 gccctttctccccctccatggcctcccgtat 392
|||| |||| |||||||||||||||||||||
Sbjct: 1357 gccccttcttcccctccatggcctcccgtat 1327
>ref|XM_471859.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1491
Score = 137 bits (69), Expect = 1e-029
Identities = 174/209 (83%)
Strand = Plus / Minus
Query: 367 ttctccccctccatggcctcccgtatgagcgactctacctcgccccgctgtacatcgtca 426
|||||||||||||||||||||||||| |||| | | ||||| || ||| | | ||| |
Sbjct: 1340 ttctccccctccatggcctcccgtatcagcgccgccacctcccctcgccgcgcctcgccg 1281
Query: 427 ccgatctcttttccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcg 486
|||||||| | |||| ||||||||| || | |||||| |||||||| |||||||||||
Sbjct: 1280 ccgatctccatcccgacgccccactccgtccgcttgtaccggcagttcgtctgctgctcc 1221
Query: 487 gcgaagaagggccagcacagcatgggaacgccgccgcaaatactctccagcgtggagttc 546
|||||||| ||||||| |||||| || ||||| || | ||||||||||| ||||||
Sbjct: 1220 gcgaagaacggccagctcagcatcggcacgcccgcggcgaggctctccagcgtcgagttc 1161
Query: 547 cacccggagtgcgtcaggaacacccccac 575
||||||||||||||||||||||| |||||
Sbjct: 1160 cacccggagtgcgtcaggaacacgcccac 1132
Score = 107 bits (54), Expect = 1e-020
Identities = 152/184 (82%), Gaps = 3/184 (1%)
Strand = Plus / Minus
Query: 648 gaactctggcggcagcccggcggagtcgccactcttgacgaggtccgggcgtacgttcca 707
|||||| ||||||||| ||||| |||||| |||||||||||| ||||| ||||||||
Sbjct: 1059 gaactccggcggcagcatggcggcgtcgcc---cttgacgaggtcggggcgcacgttcca 1003
Query: 708 taggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgttgga 767
||||| ||||||| ||| || || ||||| |||||||||| ||||||||||| |
Sbjct: 1002 gaggaacgggtagccgctgtgagcgaggccccaggcgaactcgaggagctgctcgttcgt 943
Query: 768 catcaccgtgatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttgag 827
|||||| | |||||| ||| ||||||| ||||| ||||||||||||| ||||||| |||
Sbjct: 942 catcacggcgatgctgccgtagttgacgtacacgacggagcgcggcggccggccgtcgag 883
Query: 828 ccac 831
||||
Sbjct: 882 ccac 879
>ref|NT_079856.2| Oryza sativa (japonica cultivar-group)
Length = 961627
Score = 137 bits (69), Expect = 1e-029
Identities = 129/149 (86%)
Strand = Plus / Plus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||||||||||||| || | |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 892018 ccgatgccccactccgtcctcttgtaccggcagttcgtctgctgctccgcgaagaagggc 892077
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| |||||| || |||||| || | |||||||| || ||||||||||||||||||
Sbjct: 892078 cagctcagcatcggcacgccggcggctaggctctccagtgtcgagttccacccggagtgc 892137
Query: 559 gtcaggaacacccccacggcatcatgctc 587
||||||||||| |||||||| || |||||
Sbjct: 892138 gtcaggaacacgcccacggcgtcgtgctc 892166
Score = 81.8 bits (41), Expect = 7e-013
Identities = 98/117 (83%)
Strand = Plus / Plus
Query: 459 cttgtatcggcagttggtctgctgctcggcgaagaagggccagcacagcatgggaacgcc 518
|||||| |||||||| ||||||||||| |||||||| |||||| |||||| | |||||
Sbjct: 882864 cttgtaccggcagttcgtctgctgctccgcgaagaacagccagctcagcatcagcacgcc 882923
Query: 519 gccgcaaatactctccagcgtggagttccacccggagtgcgtcaggaacacccccac 575
| | ||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 882924 ggaggcggggctctccagcgtcgagttccacccggagtgcgtcaggaacacacccac 882980
Score = 71.9 bits (36), Expect = 7e-010
Identities = 105/128 (82%)
Strand = Plus / Plus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| ||| ||| | |||| ||||||| ||| ||| ||||||||
Sbjct: 892266 cttgacgaggtctgggcggacgacccacacgaaggcgtagccgctgtcggcgagccccca 892325
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| | |||||||||| | | |||||||| |||||| ||| || | || |||||
Sbjct: 892326 cgcgaactccagcagctgctcgctcgtcatcaccgcgatgctgccgtagctcacgtacac 892385
Query: 801 aacggagc 808
|||||||
Sbjct: 892386 gacggagc 892393
Score = 46.1 bits (23), Expect = 0.040
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 362 gccctttctccccctccatggcctcccgtat 392
|||| |||| |||||||||||||||||||||
Sbjct: 891941 gccccttcttcccctccatggcctcccgtat 891971
>emb|AL662986.3|OSJN00187 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087H01,
complete sequence
Length = 166906
Score = 137 bits (69), Expect = 1e-029
Identities = 129/149 (86%)
Strand = Plus / Plus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||||||||||||| || | |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 97297 ccgatgccccactccgtcctcttgtaccggcagttcgtctgctgctccgcgaagaagggc 97356
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| |||||| || |||||| || | |||||||| || ||||||||||||||||||
Sbjct: 97357 cagctcagcatcggcacgccggcggctaggctctccagtgtcgagttccacccggagtgc 97416
Query: 559 gtcaggaacacccccacggcatcatgctc 587
||||||||||| |||||||| || |||||
Sbjct: 97417 gtcaggaacacgcccacggcgtcgtgctc 97445
Score = 81.8 bits (41), Expect = 7e-013
Identities = 98/117 (83%)
Strand = Plus / Plus
Query: 459 cttgtatcggcagttggtctgctgctcggcgaagaagggccagcacagcatgggaacgcc 518
|||||| |||||||| ||||||||||| |||||||| |||||| |||||| | |||||
Sbjct: 88143 cttgtaccggcagttcgtctgctgctccgcgaagaacagccagctcagcatcagcacgcc 88202
Query: 519 gccgcaaatactctccagcgtggagttccacccggagtgcgtcaggaacacccccac 575
| | ||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 88203 ggaggcggggctctccagcgtcgagttccacccggagtgcgtcaggaacacacccac 88259
Score = 71.9 bits (36), Expect = 7e-010
Identities = 105/128 (82%)
Strand = Plus / Plus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| ||| ||| | |||| ||||||| ||| ||| ||||||||
Sbjct: 97545 cttgacgaggtctgggcggacgacccacacgaaggcgtagccgctgtcggcgagccccca 97604
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| | |||||||||| | | |||||||| |||||| ||| || | || |||||
Sbjct: 97605 cgcgaactccagcagctgctcgctcgtcatcaccgcgatgctgccgtagctcacgtacac 97664
Query: 801 aacggagc 808
|||||||
Sbjct: 97665 gacggagc 97672
Score = 46.1 bits (23), Expect = 0.040
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 362 gccctttctccccctccatggcctcccgtat 392
|||| |||| |||||||||||||||||||||
Sbjct: 97220 gccccttcttcccctccatggcctcccgtat 97250
>emb|AL663022.4|OSJN00222 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0054D14,
complete sequence
Length = 160587
Score = 137 bits (69), Expect = 1e-029
Identities = 129/149 (86%)
Strand = Plus / Minus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||||||||||||| || | |||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 30646 ccgatgccccactccgtcctcttgtaccggcagttcgtctgctgctccgcgaagaagggc 30587
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| |||||| || |||||| || | |||||||| || ||||||||||||||||||
Sbjct: 30586 cagctcagcatcggcacgccggcggctaggctctccagtgtcgagttccacccggagtgc 30527
Query: 559 gtcaggaacacccccacggcatcatgctc 587
||||||||||| |||||||| || |||||
Sbjct: 30526 gtcaggaacacgcccacggcgtcgtgctc 30498
Score = 89.7 bits (45), Expect = 3e-015
Identities = 99/117 (84%)
Strand = Plus / Minus
Query: 459 cttgtatcggcagttggtctgctgctcggcgaagaagggccagcacagcatgggaacgcc 518
|||||| |||||||| ||||||||||| |||||||| |||||| |||||| || |||||
Sbjct: 48180 cttgtaccggcagttcgtctgctgctccgcgaagaacagccagctcagcatcggcacgcc 48121
Query: 519 gccgcaaatactctccagcgtggagttccacccggagtgcgtcaggaacacccccac 575
| | ||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 48120 ggaggcggggctctccagcgtcgagttccacccggagtgcgtcaggaacacacccac 48064
Score = 71.9 bits (36), Expect = 7e-010
Identities = 105/128 (82%)
Strand = Plus / Minus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| ||| ||| | |||| ||||||| ||| ||| ||||||||
Sbjct: 30398 cttgacgaggtctgggcggacgacccacacgaaggcgtagccgctgtcggcgagccccca 30339
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| | |||||||||| | | |||||||| |||||| ||| || | || |||||
Sbjct: 30338 cgcgaactccagcagctgctcgctcgtcatcaccgcgatgctgccgtagctcacgtacac 30279
Query: 801 aacggagc 808
|||||||
Sbjct: 30278 gacggagc 30271
Score = 46.1 bits (23), Expect = 0.040
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 362 gccctttctccccctccatggcctcccgtat 392
|||| |||| |||||||||||||||||||||
Sbjct: 30723 gccccttcttcccctccatggcctcccgtat 30693
>emb|AL731634.4|OSJN00276 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033P05,
complete sequence
Length = 120635
Score = 137 bits (69), Expect = 1e-029
Identities = 174/209 (83%)
Strand = Plus / Plus
Query: 367 ttctccccctccatggcctcccgtatgagcgactctacctcgccccgctgtacatcgtca 426
|||||||||||||||||||||||||| |||| | | ||||| || ||| | | ||| |
Sbjct: 43860 ttctccccctccatggcctcccgtatcagcgccgccacctcccctcgccgcgcctcgccg 43919
Query: 427 ccgatctcttttccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcg 486
|||||||| | |||| ||||||||| || | |||||| |||||||| |||||||||||
Sbjct: 43920 ccgatctccatcccgacgccccactccgtccgcttgtaccggcagttcgtctgctgctcc 43979
Query: 487 gcgaagaagggccagcacagcatgggaacgccgccgcaaatactctccagcgtggagttc 546
|||||||| ||||||| |||||| || ||||| || | ||||||||||| ||||||
Sbjct: 43980 gcgaagaacggccagctcagcatcggcacgcccgcggcgaggctctccagcgtcgagttc 44039
Query: 547 cacccggagtgcgtcaggaacacccccac 575
||||||||||||||||||||||| |||||
Sbjct: 44040 cacccggagtgcgtcaggaacacgcccac 44068
Score = 121 bits (61), Expect = 8e-025
Identities = 118/137 (86%)
Strand = Plus / Plus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| |||| |||||| |||||||| ||||||||||| |||||||| |||
Sbjct: 56549 ccgacgccccactccgtgcgcttgtaccggcagttcgtctgctgctccgcgaagaacggc 56608
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| |||||| || ||||| || | ||||||||||| ||||||||||||||||||
Sbjct: 56609 cagctcagcatcggcacgcccgcggcgaggctctccagcgtcgagttccacccggagtgc 56668
Query: 559 gtcaggaacacccccac 575
||||||||||| |||||
Sbjct: 56669 gtcaggaacacacccac 56685
Score = 115 bits (58), Expect = 5e-023
Identities = 153/184 (83%), Gaps = 3/184 (1%)
Strand = Plus / Plus
Query: 648 gaactctggcggcagcccggcggagtcgccactcttgacgaggtccgggcgtacgttcca 707
|||||| ||||||||| |||||| |||||| |||||||||||| ||||| ||||||||
Sbjct: 56758 gaactccggcggcagcacggcggcgtcgcc---cttgacgaggtcggggcgcacgttcca 56814
Query: 708 taggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgttgga 767
||||| ||||||| ||| ||| || ||||| |||||||| | ||||||||||| |
Sbjct: 56815 gaggaatgggtagccgctgtgggcgaggccccaggcgaactccaggagctgctcgttcgt 56874
Query: 768 catcaccgtgatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttgag 827
|||||| | |||||| ||| ||||||| ||||| ||||||||||| | |||||||| |||
Sbjct: 56875 catcacggcgatgctgccgtagttgacgtacacgacggagcgcggaggacggccgtcgag 56934
Query: 828 ccac 831
||||
Sbjct: 56935 ccac 56938
Score = 107 bits (54), Expect = 1e-020
Identities = 152/184 (82%), Gaps = 3/184 (1%)
Strand = Plus / Plus
Query: 648 gaactctggcggcagcccggcggagtcgccactcttgacgaggtccgggcgtacgttcca 707
|||||| ||||||||| ||||| |||||| |||||||||||| ||||| ||||||||
Sbjct: 44141 gaactccggcggcagcatggcggcgtcgcc---cttgacgaggtcggggcgcacgttcca 44197
Query: 708 taggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgttgga 767
||||| ||||||| ||| || || ||||| |||||||||| ||||||||||| |
Sbjct: 44198 gaggaacgggtagccgctgtgagcgaggccccaggcgaactcgaggagctgctcgttcgt 44257
Query: 768 catcaccgtgatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttgag 827
|||||| | |||||| ||| ||||||| ||||| ||||||||||||| ||||||| |||
Sbjct: 44258 catcacggcgatgctgccgtagttgacgtacacgacggagcgcggcggccggccgtcgag 44317
Query: 828 ccac 831
||||
Sbjct: 44318 ccac 44321
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 353 gcatctcttgccctttctccccctccatggcctcccgtat 392
||||||| |||||||||||||||||||||||||||||||
Sbjct: 56463 gcatctcccgccctttctccccctccatggcctcccgtat 56502
>gb|CB656161.1|CB656161 OSJNEc10C23.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc10C23 3', mRNA sequence
Length = 502
Score = 135 bits (68), Expect = 6e-029
Identities = 143/168 (85%)
Strand = Plus / Plus
Query: 444 gccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggccagca 503
||||||||||||||| |||| |||| ||||||||||||||| || || || ||||||||
Sbjct: 299 gccccactcggtgcagctgtaccggcggttggtctgctgctccgcaaaaaacggccagca 358
Query: 504 cagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgcgtcag 563
|||||| || || |||||||| | ||||||| ||| |||||||| ||||||||||||||
Sbjct: 359 cagcatcggcaccccgccgcagaggctctccaccgtcgagttccagccggagtgcgtcag 418
Query: 564 gaacacccccacggcatcatgctccagcacagctgcctgcgggcacca 611
|||||||||||| || || ||| |||||| || |||||||||||||
Sbjct: 419 gaacacccccaccgcctcgtgccgcagcaccgcctcctgcgggcacca 466
>gb|AQ689190.1|AQ689190 nbxb0079G15r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0079G15r, DNA sequence
Length = 696
Score = 129 bits (65), Expect = 3e-027
Identities = 119/137 (86%)
Strand = Plus / Plus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| |||| |||||| |||||||| ||||||||||||||||||||||||
Sbjct: 206 ccgacgccccactccgtgcgcttgtaccggcagttcgtctgctgctcggcgaagaagggc 265
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| || ||| || || ||| | || | ||||||||||| ||||||||||| ||||||
Sbjct: 266 cagctcaacattggcacaccggcacagaggctctccagcgtcgagttccacccagagtgc 325
Query: 559 gtcaggaacacccccac 575
||||||||||| |||||
Sbjct: 326 gtcaggaacacgcccac 342
Score = 117 bits (59), Expect = 1e-023
Identities = 122/143 (85%)
Strand = Plus / Plus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| |||||||| ||||| ||||||| ||| ||| || |||||
Sbjct: 445 cttgacgaggtcggggcgcacgttccagaggaacgggtagccgctgtgggcgaggcccca 504
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| | |||||||||||| | |||||| |||||||| ||| ||||||| |||||
Sbjct: 505 cgcgaactccagcagctgctcgttcgtcatcacggtgatgctgccgtagttgacgtacac 564
Query: 801 aacggagcgcggcgcacggccgt 823
||||||||||||| |||||||
Sbjct: 565 gacggagcgcggcggccggccgt 587
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 353 gcatctcttgccctttctccccctccatggcctcccgtat 392
||||||| |||||||||||||||||||||||||||||||
Sbjct: 120 gcatctcccgccctttctccccctccatggcctcccgtat 159
>ref|XM_471822.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1431
Score = 129 bits (65), Expect = 3e-027
Identities = 119/137 (86%)
Strand = Plus / Minus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| |||| |||||| |||||||| ||||||||||||||||||||||||
Sbjct: 1202 ccgacgccccactccgtgcgcttgtaccggcagttcgtctgctgctcggcgaagaagggc 1143
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| || ||| || || ||| | || | ||||||||||| ||||||||||| ||||||
Sbjct: 1142 cagctcaacattggcacaccggcacagaggctctccagcgtcgagttccacccagagtgc 1083
Query: 559 gtcaggaacacccccac 575
||||||||||| |||||
Sbjct: 1082 gtcaggaacacgcccac 1066
Score = 117 bits (59), Expect = 1e-023
Identities = 122/143 (85%)
Strand = Plus / Minus
Query: 681 cttgacgaggtccgggcgtacgttccataggaagtagtagccggtgttggccagccccca 740
|||||||||||| ||||| |||||||| ||||| ||||||| ||| ||| || |||||
Sbjct: 963 cttgacgaggtcggggcgcacgttccagaggaacgggtagccgctgtgggcgaggcccca 904
Query: 741 cgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacac 800
||||||||| | |||||||||||| | |||||| |||||||| ||| ||||||| |||||
Sbjct: 903 cgcgaactccagcagctgctcgttcgtcatcacggtgatgctgccgtagttgacgtacac 844
Query: 801 aacggagcgcggcgcacggccgt 823
||||||||||||| |||||||
Sbjct: 843 gacggagcgcggcggccggccgt 821
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 353 gcatctcttgccctttctccccctccatggcctcccgtat 392
||||||| |||||||||||||||||||||||||||||||
Sbjct: 1288 gcatctcccgccctttctccccctccatggcctcccgtat 1249
>gb|AQ159266.1|AQ159266 nbxb0013E02r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0013E02r, DNA sequence
Length = 646
Score = 121 bits (61), Expect = 8e-025
Identities = 118/137 (86%)
Strand = Plus / Plus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| |||| |||||| |||||||| ||||||||||| |||||||| |||
Sbjct: 206 ccgacgccccactccgtgcgcttgtaccggcagttcgtctgctgctccgcgaagaacggc 265
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| |||||| || ||||| || | ||||||||||| ||||||||||||||||||
Sbjct: 266 cagctcagcatcggcacgcccgcggcgaggctctccagcgtcgagttccacccggagtgc 325
Query: 559 gtcaggaacacccccac 575
||||||||||| |||||
Sbjct: 326 gtcaggaacacacccac 342
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 353 gcatctcttgccctttctccccctccatggcctcccgtat 392
||||||| |||||||||||||||||||||||||||||||
Sbjct: 120 gcatctcccgccctttctccccctccatggcctcccgtat 159
>gb|AQ274007.1|AQ274007 nbxb0032I07f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0032I07f, DNA sequence
Length = 637
Score = 121 bits (61), Expect = 8e-025
Identities = 118/137 (86%)
Strand = Plus / Plus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| |||| |||||| |||||||| ||||||||||| |||||||| |||
Sbjct: 205 ccgacgccccactccgtgcgcttgtaccggcagttcgtctgctgctccgcgaagaacggc 264
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| |||||| || ||||| || | ||||||||||| ||||||||||||||||||
Sbjct: 265 cagctcagcatcggcacgcccgcggcgaggctctccagcgtcgagttccacccggagtgc 324
Query: 559 gtcaggaacacccccac 575
||||||||||| |||||
Sbjct: 325 gtcaggaacacacccac 341
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 353 gcatctcttgccctttctccccctccatggcctcccgtat 392
||||||| |||||||||||||||||||||||||||||||
Sbjct: 119 gcatctcccgccctttctccccctccatggcctcccgtat 158
>gb|AQ577711.1|AQ577711 nbxb0091F07r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0091F07r, DNA sequence
Length = 710
Score = 121 bits (61), Expect = 8e-025
Identities = 118/137 (86%)
Strand = Plus / Plus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| |||| |||||| |||||||| ||||||||||| |||||||| |||
Sbjct: 206 ccgacgccccactccgtgcgcttgtaccggcagttcgtctgctgctccgcgaagaacggc 265
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| |||||| || ||||| || | ||||||||||| ||||||||||||||||||
Sbjct: 266 cagctcagcatcggcacgcccgcggcgaggctctccagcgtcgagttccacccggagtgc 325
Query: 559 gtcaggaacacccccac 575
||||||||||| |||||
Sbjct: 326 gtcaggaacacacccac 342
Score = 99.6 bits (50), Expect = 3e-018
Identities = 138/167 (82%), Gaps = 3/167 (1%)
Strand = Plus / Plus
Query: 648 gaactctggcggcagcccggcggagtcgccactcttgacgaggtccgggcgtacgttcca 707
|||||| ||||||||| |||||| |||||| |||||||||||| ||||| ||||||||
Sbjct: 415 gaactccggcggcagcacggcggcgtcgcc---cttgacgaggtcggggcgcacgttcca 471
Query: 708 taggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgttgga 767
||||| ||||||| ||| ||| || ||||| |||||||| | ||||||||||| |
Sbjct: 472 gaggaatgggtagccgctgtgggcgaggccccaggcgaactccaggagctgctcgttcgt 531
Query: 768 catcaccgtgatgctcccgaagttgacatacacaacggagcgcggcg 814
|||||| | |||||| ||| ||||||| ||||| || ||||||||||
Sbjct: 532 catcacggcgatgctgccgtagttgacgtacacgacngagcgcggcg 578
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 353 gcatctcttgccctttctccccctccatggcctcccgtat 392
||||||| |||||||||||||||||||||||||||||||
Sbjct: 120 gcatctcccgccctttctccccctccatggcctcccgtat 159
>gb|AACV01009341.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009341, whole
genome shotgun sequence
Length = 10111
Score = 121 bits (61), Expect = 8e-025
Identities = 118/137 (86%)
Strand = Plus / Minus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| |||| |||||| |||||||| ||||||||||| |||||||| |||
Sbjct: 9815 ccgacgccccactccgtgcgcttgtaccggcagttcgtctgctgctccgcgaagaacggc 9756
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| |||||| || ||||| || | ||||||||||| ||||||||||||||||||
Sbjct: 9755 cagctcagcatcggcacgcccgcggcgaggctctccagcgtcgagttccacccggagtgc 9696
Query: 559 gtcaggaacacccccac 575
||||||||||| |||||
Sbjct: 9695 gtcaggaacacacccac 9679
Score = 87.7 bits (44), Expect = 1e-014
Identities = 123/148 (83%), Gaps = 1/148 (0%)
Strand = Plus / Minus
Query: 685 acgaggtccggg-cgtacgttccataggaagtagtagccggtgttggccagcccccacgc 743
|||||||||||| || |||||||| ||||| ||||||| ||| ||| || ||||| ||
Sbjct: 9572 acgaggtccggggcgcacgttccagaggaatgggtagccgctgtgggcgaggccccaggc 9513
Query: 744 gaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttgacatacacaac 803
|||||| | ||||||||||| | |||||| | |||||| ||| ||||||| ||||| ||
Sbjct: 9512 gaactccaggagctgctcgttcgtcatcacggcgatgctgccgtagttgacgtacacgac 9453
Query: 804 ggagcgcggcgcacggccgttgagccac 831
||||||||||| ||||||| |||||||
Sbjct: 9452 ggagcgcggcggccggccgtcgagccac 9425
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 353 gcatctcttgccctttctccccctccatggcctcccgtat 392
||||||| |||||||||||||||||||||||||||||||
Sbjct: 9901 gcatctcccgccctttctccccctccatggcctcccgtat 9862
>gb|AACV01009342.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009342, whole
genome shotgun sequence
Length = 3857
Score = 121 bits (61), Expect = 8e-025
Identities = 175/213 (82%)
Strand = Plus / Plus
Query: 363 ccctttctccccctccatggcctcccgtatgagcgactctacctcgccccgctgtacatc 422
|||||| ||||||||||||||||||||||| |||| | ||||| || || | | ||
Sbjct: 2632 ccctttttccccctccatggcctcccgtataagcgccgggacctccccttgccgggcctc 2691
Query: 423 gtcaccgatctcttttccgatgccccactcggtgcacttgtatcggcagttggtctgctg 482
| | |||||||| | |||| ||||||||| || | |||||| |||||||| ||||||||
Sbjct: 2692 gccgccgatctccatcccgacgccccactccgtccgcttgtaccggcagttcgtctgctg 2751
Query: 483 ctcggcgaagaagggccagcacagcatgggaacgccgccgcaaatactctccagcgtgga 542
||| |||||||| ||||||| |||||| || ||||| || | ||||||||||| ||
Sbjct: 2752 ctccgcgaagaacggccagctcagcatcggcacgccagcggcgaggctctccagcgtcga 2811
Query: 543 gttccacccggagtgcgtcaggaacacccccac 575
||||||||||||||||||||||||||| |||||
Sbjct: 2812 gttccacccggagtgcgtcaggaacacgcccac 2844
Score = 115 bits (58), Expect = 5e-023
Identities = 153/184 (83%), Gaps = 3/184 (1%)
Strand = Plus / Plus
Query: 648 gaactctggcggcagcccggcggagtcgccactcttgacgaggtccgggcgtacgttcca 707
|||||| ||||||||| |||||| |||||| |||||||||||| ||||| ||||||||
Sbjct: 2917 gaactccggcggcagcacggcggcgtcgcc---cttgacgaggtcggggcgcacgttcca 2973
Query: 708 taggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgttgga 767
||||| ||||||| ||| || || ||||| |||||||||| ||||||||||| |
Sbjct: 2974 gaggaacgggtagccgctgtgagcgaggccccaggcgaactcgaggagctgctcgttcgt 3033
Query: 768 catcaccgtgatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttgag 827
|||||| | |||||| ||| ||||||| ||||| ||||||||||||| ||||||| |||
Sbjct: 3034 catcacggcgatgctgccgtagttgacgtacacgacggagcgcggcggccggccgtcgag 3093
Query: 828 ccac 831
||||
Sbjct: 3094 ccac 3097
>ref|XM_471860.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1479
Score = 121 bits (61), Expect = 8e-025
Identities = 118/137 (86%)
Strand = Plus / Minus
Query: 439 ccgatgccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggc 498
|||| ||||||||| |||| |||||| |||||||| ||||||||||| |||||||| |||
Sbjct: 1250 ccgacgccccactccgtgcgcttgtaccggcagttcgtctgctgctccgcgaagaacggc 1191
Query: 499 cagcacagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgc 558
|||| |||||| || ||||| || | ||||||||||| ||||||||||||||||||
Sbjct: 1190 cagctcagcatcggcacgcccgcggcgaggctctccagcgtcgagttccacccggagtgc 1131
Query: 559 gtcaggaacacccccac 575
||||||||||| |||||
Sbjct: 1130 gtcaggaacacacccac 1114
Score = 115 bits (58), Expect = 5e-023
Identities = 153/184 (83%), Gaps = 3/184 (1%)
Strand = Plus / Minus
Query: 648 gaactctggcggcagcccggcggagtcgccactcttgacgaggtccgggcgtacgttcca 707
|||||| ||||||||| |||||| |||||| |||||||||||| ||||| ||||||||
Sbjct: 1041 gaactccggcggcagcacggcggcgtcgcc---cttgacgaggtcggggcgcacgttcca 985
Query: 708 taggaagtagtagccggtgttggccagcccccacgcgaactcgaccagctgctcgttgga 767
||||| ||||||| ||| ||| || ||||| |||||||| | ||||||||||| |
Sbjct: 984 gaggaatgggtagccgctgtgggcgaggccccaggcgaactccaggagctgctcgttcgt 925
Query: 768 catcaccgtgatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttgag 827
|||||| | |||||| ||| ||||||| ||||| ||||||||||| | |||||||| |||
Sbjct: 924 catcacggcgatgctgccgtagttgacgtacacgacggagcgcggaggacggccgtcgag 865
Query: 828 ccac 831
||||
Sbjct: 864 ccac 861
Score = 63.9 bits (32), Expect = 2e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 353 gcatctcttgccctttctccccctccatggcctcccgtat 392
||||||| |||||||||||||||||||||||||||||||
Sbjct: 1336 gcatctcccgccctttctccccctccatggcctcccgtat 1297
>dbj|AK105275.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-A04, full
insert sequence
Length = 1764
Score = 119 bits (60), Expect = 3e-024
Identities = 105/120 (87%)
Strand = Plus / Minus
Query: 456 gcacttgtatcggcagttggtctgctgctcggcgaagaagggccagcacagcatgggaac 515
||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||
Sbjct: 1397 gcacttgtaccggcagttggtctgctgctcggcgaagaacggccagcacagcatcggcac 1338
Query: 516 gccgccgcaaatactctccagcgtggagttccacccggagtgcgtcaggaacacccccac 575
||||||| | | ||||| ||| |||||||||||| |||||||||||||| ||||||
Sbjct: 1337 gccgccggacagcgcctccaccgtcgagttccacccgctgtgcgtcaggaacaaccccac 1278
>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:B1342F01
Length = 153287
Score = 119 bits (60), Expect = 3e-024
Identities = 105/120 (87%)
Strand = Plus / Minus
Query: 456 gcacttgtatcggcagttggtctgctgctcggcgaagaagggccagcacagcatgggaac 515
||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||
Sbjct: 146293 gcacttgtaccggcagttggtctgctgctcggcgaagaacggccagcacagcatcggcac 146234
Query: 516 gccgccgcaaatactctccagcgtggagttccacccggagtgcgtcaggaacacccccac 575
||||||| | | ||||| ||| |||||||||||| |||||||||||||| ||||||
Sbjct: 146233 gccgccggacagcgcctccaccgtcgagttccacccgctgtgcgtcaggaacaaccccac 146174
Score = 97.6 bits (49), Expect = 1e-017
Identities = 85/97 (87%)
Strand = Plus / Minus
Query: 471 gttggtctgctgctcggcgaagaagggccagcacagcatgggaacgccgccgcaaatact 530
||||||||||||||||||||||||||||||||||||||| || || ||| ||| | ||
Sbjct: 131830 gttggtctgctgctcggcgaagaagggccagcacagcatcggcaccccggcgctgaggct 131771
Query: 531 ctccagcgtggagttccacccggagtgcgtcaggaac 567
||||| ||| |||||||| ||| ||||||||||||||
Sbjct: 131770 ctccatcgtcgagttccaaccgcagtgcgtcaggaac 131734
Score = 95.6 bits (48), Expect = 5e-017
Identities = 138/168 (82%)
Strand = Plus / Minus
Query: 444 gccccactcggtgcacttgtatcggcagttggtctgctgctcggcgaagaagggccagca 503
||||||||| | || |||||| || |||||||| |||||||||||||||| ||||| |
Sbjct: 119323 gccccactccgcgcgcttgtacagggagttggtcggctgctcggcgaagaacggccacga 119264
Query: 504 cagcatgggaacgccgccgcaaatactctccagcgtggagttccacccggagtgcgtcag 563
|||||| || || |||||| | | ||||||||||| |||||||||||| |||||||||
Sbjct: 119263 cagcatcggcaccccgccggacaggctctccagcgtcgagttccacccgctgtgcgtcag 119204
Query: 564 gaacacccccacggcatcatgctccagcacagctgcctgcgggcacca 611
||||| | |||| || || ||| |||||| || |||||||||||||
Sbjct: 119203 gaacagcgccaccgcctcgtgccgcagcaccgcctcctgcgggcacca 119156
Score = 75.8 bits (38), Expect = 4e-011
Identities = 142/176 (80%), Gaps = 3/176 (1%)
Strand = Plus / Minus
Query: 656 gcggcagcccggcggagtcgccactcttgacgaggtccgggcgtacgttccataggaagt 715
|||||||| |||||| |||||| || ||||||||| ||||| ||| |||| ||||||
Sbjct: 131645 gcggcagcacggcggcgtcgcccct---gacgaggtcggggcggacgatccacaggaagc 131589
Query: 716 agtagccggtgttggccagcccccacgcgaactcgaccagctgctcgttggacatcaccg 775
|| |||| |||||| |||||||||||||| ||||| |||| ||||||||||| |
Sbjct: 131588 cgtggccgcagttggcgagcccccacgcgaattcgacaagctcgtcgttggacatggtgg 131529
Query: 776 tgatgctcccgaagttgacatacacaacggagcgcggcgcacggccgttgagccac 831
||||||||||| ||||||| |||| ||||| || ||| | | ||||| |||||||
Sbjct: 131528 tgatgctcccgtagttgacgaacaccacggaccggggctccctgccgtcgagccac 131473
Score = 75.8 bits (38), Expect = 4e-011
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 733 agcccccacgcgaactcgaccagctgctcgttggacatcaccgtgatgctcccgaagttg 792
||||||||||||||||| |||||||||| |||| |||||| | |||||||||| ||||
Sbjct: 119016 agcccccacgcgaactccaccagctgctggttgctcatcacggcgatgctcccgtagttc 118957
Query: 793 acatacacaacggagcgcggcgcacggccgttgagcca 830
|| ||||| ||||| || ||||| | ||||| ||||||
Sbjct: 118956 acgtacaccacggaccggggcgccctgccgtcgagcca 118919
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,255,785
Number of Sequences: 438736
Number of extensions: 1255785
Number of successful extensions: 12880
Number of sequences better than 0.5: 318
Number of HSP's better than 0.5 without gapping: 359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9574
Number of HSP's gapped (non-prelim): 3217
length of query: 1086
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1065
effective length of database: 2,791,206,460
effective search space: 2972634879900
effective search space used: 2972634879900
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)