BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2550113.2.1
(803 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU164078.1|AU164078 AU164078 Rice panicle at ripening st... 468 e-129
gb|CA999415.1|CA999415 S234H_C12 Rice cold stress germinati... 468 e-129
gb|CF291395.1|CF291395 14ROOT--01-M21.b1 Rice root plasmid ... 468 e-129
gb|CF300222.1|CF300222 7LEAF--04-I17.b1 Rice leaf plasmid c... 468 e-129
gb|CF319098.1|CF319098 HD--09-H19.b1 OsHDAC1-overexpressing... 468 e-129
gb|CF333612.1|CF333612 JMT--02-J08.b1 AtJMT-overexpressing ... 468 e-129
gb|CV728925.1|CV728925 FLO--01-H24.b1 Rice flower lambda ph... 468 e-129
gb|CV733133.1|CV733133 FLO--07-O16.b1 Rice flower lambda ph... 468 e-129
gb|CV734019.1|CV734019 FLO--09-D06.b1 Rice flower lambda ph... 468 e-129
gb|CV734250.1|CV734250 FLO--09-I12.b1 Rice flower lambda ph... 468 e-129
gb|AU161742.1|AU161742 AU161742 Rice shoot Oryza sativa (ja... 460 e-127
gb|CF291106.1|CF291106 14ROOT--01-G11.g1 Rice root plasmid ... 460 e-127
gb|AU068726.1|AU068726 AU068726 Rice callus Oryza sativa (j... 452 e-124
gb|CF298216.1|CF298216 7LEAF--01-I04.g1 Rice leaf plasmid c... 452 e-124
gb|CF333503.1|CF333503 JMT--02-G21.g1 AtJMT-overexpressing ... 452 e-124
gb|D38864.1|D38864 RICC1768A Rice callus Oryza sativa (japo... 448 e-123
gb|AU068998.2|AU068998 AU068998 Rice callus Oryza sativa (j... 446 e-123
gb|AU069615.1|AU069615 AU069615 Rice callus Oryza sativa (j... 438 e-120
gb|AU164079.1|AU164079 AU164079 Rice panicle at ripening st... 438 e-120
gb|AU069919.1|AU069919 AU069919 Rice panicle (longer than 1... 436 e-120
gb|AU160893.1|AU160893 AU160893 Rice callus Oryza sativa (j... 420 e-115
gb|CB683249.1|CB683249 OSJNEf11G05.f OSJNEf Oryza sativa (j... 420 e-115
gb|AU160892.1|AU160892 AU160892 Rice callus Oryza sativa (j... 414 e-113
gb|CV723239.1|CV723239 root--02-P04.g1 Rice root lambda pha... 383 e-103
ref|XM_482582.1| Oryza sativa (japonica cultivar-group), mRNA 383 e-103
gb|C74023.1|C74023 C74023 Rice panicle shorter than 3cm Ory... 375 e-101
dbj|AK062479.1| Oryza sativa (japonica cultivar-group) cDNA... 375 e-101
gb|CF333502.1|CF333502 JMT--02-G21.b1 AtJMT-overexpressing ... 371 e-100
gb|D38797.1|D38797 RICC0418A Rice callus Oryza sativa (japo... 365 2e-098
gb|AU083366.1|AU083366 AU083366 Rice callus Oryza sativa (j... 365 2e-098
gb|C91722.2|C91722 C91722 Rice panicle shorter than 3cm Ory... 355 2e-095
gb|D38960.2|D38960 RICC2984A Rice callus Oryza sativa (japo... 329 1e-087
gb|D38966.1|D38966 RICC3087A Rice callus Oryza sativa (japo... 327 5e-087
gb|CF298215.1|CF298215 7LEAF--01-I04.b1 Rice leaf plasmid c... 309 1e-081
gb|CF319099.1|CF319099 HD--09-H19.g1 OsHDAC1-overexpressing... 309 1e-081
gb|CV731034.1|CV731034 FLO--04-O02.g1 Rice flower lambda ph... 309 1e-081
gb|AU165721.1|AU165721 AU165721 Rice panicle at flowering s... 301 3e-079
dbj|AK103424.1| Oryza sativa (japonica cultivar-group) cDNA... 301 3e-079
ref|XM_480178.1| Oryza sativa (japonica cultivar-group), mRNA 301 3e-079
gb|AU064155.1|AU064155 AU064155 Rice panicle at flowering s... 295 2e-077
gb|D16082.1|D16082 RICC2993A Rice callus Oryza sativa (japo... 289 1e-075
gb|CV734251.1|CV734251 FLO--09-I12.g1 Rice flower lambda ph... 289 1e-075
gb|C93460.1|C93460 C93460 Rice callus Oryza sativa (japonic... 283 7e-074
gb|CV731033.1|CV731033 FLO--04-O02.b1 Rice flower lambda ph... 276 2e-071
gb|AU094793.1|AU094793 AU094793 Rice panicle shorter than 3... 270 1e-069
gb|AU172951.1|AU172951 AU172951 Rice immature leaf includin... 266 2e-068
gb|D23601.1|D23601 RICC3071A Rice callus Oryza sativa (japo... 262 3e-067
gb|AU064190.1|AU064190 AU064190 Rice panicle at flowering s... 248 4e-063
gb|CF291396.1|CF291396 14ROOT--01-M21.g1 Rice root plasmid ... 244 6e-062
gb|CV728926.1|CV728926 FLO--01-H24.g1 Rice flower lambda ph... 244 6e-062
gb|AU108870.1|AU108870 AU108870 Rice callus Oryza sativa (j... 236 2e-059
gb|C91831.1|C91831 C91831 Rice panicle shorter than 3cm Ory... 234 6e-059
gb|C27355.1|C27355 C27355 Rice callus cDNA Oryza sativa (ja... 220 9e-055
gb|AU182828.1|AU182828 AU182828 Rice panicle shorter than 3... 212 2e-052
gb|AU029336.1|AU029336 AU029336 Rice panicle shorter than 3... 210 9e-052
dbj|AK059470.1| Oryza sativa (japonica cultivar-group) cDNA... 208 3e-051
gb|AU161743.1|AU161743 AU161743 Rice shoot Oryza sativa (ja... 184 5e-044
gb|CV731264.1|CV731264 FLO--05-D12.g1 Rice flower lambda ph... 165 5e-038
gb|C74671.1|C74671 C74671 Rice cDNA from immature leaf incl... 157 1e-035
dbj|AP005152.1| Oryza sativa (japonica cultivar-group) chro... 157 1e-035
dbj|AP005397.2| Oryza sativa (japonica cultivar-group) geno... 157 1e-035
gb|AACV01019976.1| Oryza sativa (japonica cultivar-group) c... 157 1e-035
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 157 1e-035
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 157 1e-035
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 157 1e-035
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 157 1e-035
gb|CV729686.1|CV729686 FLO--02-N01.b1 Rice flower lambda ph... 149 3e-033
gb|C28066.1|C28066 C28066 Rice callus cDNA Oryza sativa (ja... 141 7e-031
dbj|AP004567.1| Oryza sativa (japonica cultivar-group) chro... 141 7e-031
dbj|AP004700.1| Oryza sativa (japonica cultivar-group) chro... 141 7e-031
dbj|AP005159.3| Oryza sativa (japonica cultivar-group) geno... 141 7e-031
gb|AACV01018549.1| Oryza sativa (japonica cultivar-group) c... 141 7e-031
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 141 7e-031
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 141 7e-031
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 141 7e-031
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 141 7e-031
gb|CF300223.1|CF300223 7LEAF--04-I17.g1 Rice leaf plasmid c... 129 3e-027
gb|CF333613.1|CF333613 JMT--02-J08.g1 AtJMT-overexpressing ... 129 3e-027
dbj|AP004460.2| Oryza sativa (japonica cultivar-group) geno... 113 1e-022
gb|AACV01017310.1| Oryza sativa (japonica cultivar-group) c... 113 1e-022
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 113 1e-022
gb|AQ578128.1|AQ578128 nbxb0083F02f CUGI Rice BAC Library O... 62 5e-007
dbj|AK059401.1| Oryza sativa (japonica cultivar-group) cDNA... 54 1e-004
dbj|AK062367.1| Oryza sativa (japonica cultivar-group) cDNA... 54 1e-004
gb|CF195679.1|CF195679 Azbi1.1_G06 AZ-BI Oryza sativa (japo... 50 0.002
>gb|AU164078.1|AU164078 AU164078 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E12162, mRNA sequence
Length = 443
Score = 468 bits (236), Expect = e-129
Identities = 323/352 (91%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 417 cttgtccttggttttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 358
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 357 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 298
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 297 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 238
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
|||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 237 gggaattccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttctt 178
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 177 ggtgtactggtacacgagcttgccacctggagtcttgacgacccgcgtctgattagactt 118
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
||||||||||||||||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 117 cgtggcatagctgtgccttttgcggtacgtcaggcgctgcaccatctcgccg 66
>gb|CA999415.1|CA999415 S234H_C12 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 609
Score = 468 bits (236), Expect = e-129
Identities = 323/352 (91%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 387 cttgtccttggttttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 328
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 327 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 268
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 267 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 208
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
|||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 207 gggaattccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttctt 148
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 147 ggtgtactggtacacgagcttgccacctggagtcttgacgacccgcgtctgattagactt 88
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
||||||||||||||||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 87 cgtggcatagctgtgccttttgcggtacgtcaggcgctgcaccatctcgccg 36
>gb|CF291395.1|CF291395 14ROOT--01-M21.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-M21, mRNA sequence
Length = 540
Score = 468 bits (236), Expect = e-129
Identities = 323/352 (91%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 446 cttgtccttggttttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 387
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 386 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 327
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 326 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 267
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
|||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 266 gggaattccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttctt 207
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 206 ggtgtactggtacacgagcttgccacctggagtcttgacgacccgcgtctgattagactt 147
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
||||||||||||||||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 146 cgtggcatagctgtgccttttgcggtacgtcaggcgctgcaccatctcgccg 95
>gb|CF300222.1|CF300222 7LEAF--04-I17.b1 Rice leaf plasmid cDNA library II (7LEAF) Oryza
sativa (japonica cultivar-group) cDNA clone
7LEAF--04-I17, mRNA sequence
Length = 591
Score = 468 bits (236), Expect = e-129
Identities = 323/352 (91%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 448 cttgtccttggttttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 389
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 388 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 329
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 328 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 269
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
|||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 268 gggaattccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttctt 209
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 208 ggtgtactggtacacgagcttgccacctggagtcttgacgacccgcgtctgattagactt 149
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
||||||||||||||||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 148 cgtggcatagctgtgccttttgcggtacgtcaggcgctgcaccatctcgccg 97
>gb|CF319098.1|CF319098 HD--09-H19.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--09-H19, mRNA sequence
Length = 606
Score = 468 bits (236), Expect = e-129
Identities = 323/352 (91%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 431 cttgtccttggttttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 372
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 371 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 312
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 311 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 252
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
|||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 251 gggaattccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttctt 192
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 191 ggtgtactggtacacgagcttgccacctggagtcttgacgacccgcgtctgattagactt 132
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
||||||||||||||||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 131 cgtggcatagctgtgccttttgcggtacgtcaggcgctgcaccatctcgccg 80
>gb|CF333612.1|CF333612 JMT--02-J08.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--02-J08, mRNA sequence
Length = 593
Score = 468 bits (236), Expect = e-129
Identities = 323/352 (91%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 433 cttgtccttggttttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 374
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 373 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 314
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 313 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 254
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
|||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 253 gggaattccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttctt 194
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 193 ggtgtactggtacacgagcttgccacctggagtcttgacgacccgcgtctgattagactt 134
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
||||||||||||||||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 133 cgtggcatagctgtgccttttgcggtacgtcaggcgctgcaccatctcgccg 82
>gb|CV728925.1|CV728925 FLO--01-H24.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--01-H24,
mRNA sequence
Length = 503
Score = 468 bits (236), Expect = e-129
Identities = 323/352 (91%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 430 cttgtccttggttttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 371
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 370 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 311
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 310 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 251
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
|||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 250 gggaattccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttctt 191
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 190 ggtgtactggtacacgagcttgccacctggagtcttgacgacccgcgtctgattagactt 131
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
||||||||||||||||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 130 cgtggcatagctgtgccttttgcggtacgtcaggcgctgcaccatctcgccg 79
>gb|CV733133.1|CV733133 FLO--07-O16.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--07-O16,
mRNA sequence
Length = 503
Score = 468 bits (236), Expect = e-129
Identities = 323/352 (91%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 430 cttgtccttggttttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 371
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 370 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 311
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 310 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 251
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
|||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 250 gggaattccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttctt 191
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 190 ggtgtactggtacacgagcttgccacctggagtcttgacgacccgcgtctgattagactt 131
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
||||||||||||||||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 130 cgtggcatagctgtgccttttgcggtacgtcaggcgctgcaccatctcgccg 79
>gb|CV734019.1|CV734019 FLO--09-D06.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--09-D06,
mRNA sequence
Length = 539
Score = 468 bits (236), Expect = e-129
Identities = 323/352 (91%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 478 cttgtccttggttttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 419
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 418 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 359
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 358 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 299
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
|||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 298 gggaattccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttctt 239
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 238 ggtgtactggtacacgagcttgccacccggagtcttgacgacccgcgtctgattagactt 179
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
||||||||||||||||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 178 cgtggcatagctgtgccttttgcggtacgtcaggcgctgcaccatctcgccg 127
>gb|CV734250.1|CV734250 FLO--09-I12.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--09-I12,
mRNA sequence
Length = 530
Score = 468 bits (236), Expect = e-129
Identities = 323/352 (91%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 471 cttgtccttggttttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 412
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 411 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 352
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 351 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 292
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
|||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 291 gggaattccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttctt 232
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 231 ggtgtactggtacacgagcttgccacctggagtcttgacgacccgcgtctgattagactt 172
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
||||||||||||||||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 171 cgtggcatagctgtgccttttgcggtacgtcaggcgctgcaccatctcgccg 120
>gb|AU161742.1|AU161742 AU161742 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S5251, mRNA sequence
Length = 458
Score = 460 bits (232), Expect = e-127
Identities = 323/352 (91%), Gaps = 1/352 (0%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 416 cttgtccttggt-ttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 358
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 357 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 298
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 297 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 238
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
|||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 237 gggaattccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttctt 178
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 177 ggtgtactggtacacgagcttgccacctggagtcttgacgacccgcgtctgattagactt 118
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
||||||||||||||||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 117 cgtggcatagctgtgccttttgcggtacgtcaggcgctgcaccatctcgccg 66
>gb|CF291106.1|CF291106 14ROOT--01-G11.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-G11, mRNA sequence
Length = 608
Score = 460 bits (232), Expect = e-127
Identities = 322/352 (91%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 432 cttgtccttggttttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 373
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||| ||||||||||| || ||||| |||||||||||
Sbjct: 372 gaaagcacgaatgatcctttccctaaccgcagttccagagagcactccaccatagggacg 313
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 312 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 253
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
|||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 252 gggaattccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttctt 193
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 192 ggtgtactggtacacgagcttgccacctggagtcttgacgacccgcgtctgattagactt 133
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
||||||||||||||||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 132 cgtggcatagctgtgccttttgcggtacgtcaggcgctgcaccatctcgccg 81
>gb|AU068726.1|AU068726 AU068726 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C50264_1A, mRNA sequence
Length = 461
Score = 452 bits (228), Expect = e-124
Identities = 322/352 (91%), Gaps = 1/352 (0%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| |||||||||||||||| |||||
Sbjct: 416 cttgtccttggt-ttctgtattttcaagactttcttcacaatcttctgctcttaaaccaa 358
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 357 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 298
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 297 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 238
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
|||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 237 gggaattccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttctt 178
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 177 ggtgtactggtacacgagcttgccacctggagtcttgacgacccgcgtctgattagactt 118
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
||||||||||||||||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 117 cgtggcatagctgtgccttttgcggtacgtcaggcgctgcaccatctcgccg 66
>gb|CF298216.1|CF298216 7LEAF--01-I04.g1 Rice leaf plasmid cDNA library II (7LEAF) Oryza
sativa (japonica cultivar-group) cDNA clone
7LEAF--01-I04, mRNA sequence
Length = 471
Score = 452 bits (228), Expect = e-124
Identities = 321/352 (91%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 359 cttgtccttggttttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 300
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 299 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 240
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 239 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 180
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
|||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 179 gggaattccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttctt 120
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||||||||||||||| || || |||||||||||||||| || |||||
Sbjct: 119 ggtgtactggtacacgagcttgccacctggagtaatgacgacccgcgtctgattagactt 60
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
||||||||||||||||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 59 cgtggcatagctgtgccttttgcggtacgtcaggcgctgcaccatctcgccg 8
>gb|CF333503.1|CF333503 JMT--02-G21.g1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--02-G21, mRNA sequence
Length = 621
Score = 452 bits (228), Expect = e-124
Identities = 321/352 (91%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 430 cttgtccttggttttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 371
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| | || || |||||||||||
Sbjct: 370 gaaagcacgaatgatcctttccctaactgcagttccagagtgcaccccaccatagggacg 311
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 310 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 251
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
|||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 250 gggaattccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttctt 191
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 190 ggtgtactggtacacgagcttgccacctggagtcttgacgacccgcgtctgattagactt 131
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
||||||||||||||||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 130 cgtggcatagctgtgccttttgcggtacgtcaggcgctgcaccatctcgccg 79
>gb|D38864.1|D38864 RICC1768A Rice callus Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 491
Score = 448 bits (226), Expect = e-123
Identities = 322/353 (91%), Gaps = 1/353 (0%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttct-gtaatttcaacaccttcttgacaatcttctgctcttcaacca 408
|||||| ||||| |||| ||| |||||| || ||||| |||||||||||||||| |||||
Sbjct: 391 cttgtccttggttttcttgtattttcaagactttcttnacaatcttctgctcttaaacca 332
Query: 409 ggaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggac 468
||||||||| ||||||||||| ||||||||||||||||| || ||||| ||||||||||
Sbjct: 331 agaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggac 272
Query: 469 ggttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagat 528
|||||||||||||||||||||||||||||||||| || ||||||||||| ||||| ||||
Sbjct: 271 ggttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagat 212
Query: 529 ggggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttct 588
||||||| |||||||||||||||||||||||||| |||||||||||||| || |||||||
Sbjct: 211 ggggaattccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttct 152
Query: 589 tggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggact 648
|||||||||||||||||||||||||||| || |||||||||||||||||||| || ||||
Sbjct: 151 tggtgtactggtacacgagcttgccacctggagtcttgacgacccgcgtctgattagact 92
Query: 649 tcgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
|||||||||||||||||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 91 tcgtggcatagctgtgccttttgcggtacgtcaggcgctgcaccatctcgccg 39
>gb|AU068998.2|AU068998 AU068998 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C51593_11A, mRNA sequence
Length = 411
Score = 446 bits (225), Expect = e-123
Identities = 321/352 (91%), Gaps = 1/352 (0%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| | ||||| |||||||||||||||||||| |
Sbjct: 407 cttgtccttggttttctgtattttcaagat-ttcttcacaatcttctgctcttcaacnaa 349
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 348 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 289
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 288 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 229
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
|||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 228 gggaattccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttctt 169
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 168 ggtgtactggtacacgagcttgccacctggagtcttgacgacccgcgtctgattagactt 109
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
||||||||||||||||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 108 cgtggcatagctgtgccttttgcggtacgtcaggcgctgcaccatctcgccg 57
>gb|AU069615.1|AU069615 AU069615 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C63324_1A, mRNA sequence
Length = 446
Score = 438 bits (221), Expect = e-120
Identities = 309/339 (91%)
Strand = Plus / Minus
Query: 363 ttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccaggaaagcacggatg 422
||||||| ||| || || ||||| | |||||||||||||||||||| ||||||||| |||
Sbjct: 398 ttctgtattttaaagactttcttaanaatcttctgctcttcaaccaagaaagcacgaatg 339
Query: 423 atcctttctctaactgcagttccagatagtactcccccatagggacggttcacagttctg 482
| |||||| ||||||||||||||||| || ||||| ||||||||||||||||||||||||
Sbjct: 338 aacctttccctaactgcagttccagagagcactccaccatagggacggttcacagttctg 279
Query: 483 cggttcctagacaacctggaccttttgtactcagctggcctcagatggggaatgccctgg 542
|||||||||||||||||||| || ||||||||||| ||||| ||||||||||| ||||||
Sbjct: 278 cggttcctagacaacctggatctcttgtactcagcaggcctnagatggggaattccctgg 219
Query: 543 atcttcttcccggtcacgggacacttgggcccgctggctctcttcttggtgtactggtac 602
|||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 218 atcttcttcccggtcacggggcacttgggcccgctcgccctcttcttggtgtactggtac 159
Query: 603 acgagcttgccaccaggggtcttgacgacccgcgtctggttggacttcgtggcatagctg 662
|||||||||||||| || |||||||||||||||||||| || ||||||||||||||||||
Sbjct: 158 acgagcttgccacctggagtcttgacgacccgcgtctgattagacttcgtggcatagctg 99
Query: 663 tgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
|||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 98 tgccttttgcggtacgtcaggcgctgcaccatctcgccg 60
>gb|AU164079.1|AU164079 AU164079 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E12162, mRNA sequence
Length = 625
Score = 438 bits (221), Expect = e-120
Identities = 321/352 (91%), Gaps = 2/352 (0%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 356 cttgtccttggttttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 297
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 296 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 237
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 236 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 177
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
|||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 176 gggaattccctggatcttcttcccggtcacggggcacttgggcccgctcgc-ctcttctt 118
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||| ||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 117 ggtgt-ctggtacacgagcttgccacctggagtcttgacgacccgcgtctgattagactt 59
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
||||||||||||| ||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 58 cgtggcatagctgngccttttgcggtacgtcaggcgctgcaccatctcgccg 7
>gb|AU069919.1|AU069919 AU069919 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20175_5A, mRNA sequence
Length = 451
Score = 436 bits (220), Expect = e-120
Identities = 321/352 (91%), Gaps = 2/352 (0%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| | ||||| ||||||||||||||||||||||
Sbjct: 418 cttgtccttggttttctgtattttcaagat-ttcttcacaatcttctgctcttcaaccaa 360
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 359 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 300
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 299 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 240
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
|||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 239 gggaattccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttctt 180
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||||||||||||||| || |||||||||||||||||||| || || ||
Sbjct: 179 ggtgtactggtacacgagcttgccacctggagtcttgacgacccgcgtctgattaga-tt 121
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
||||||||||||||||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 120 cgtggcatagctgtgccttttgcggtacgtcaggcgctgcaccatctcgccg 69
>gb|AU160893.1|AU160893 AU160893 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52164, mRNA sequence
Length = 577
Score = 420 bits (212), Expect = e-115
Identities = 290/315 (92%), Gaps = 1/315 (0%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 315 cttgtccttggttttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 256
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 255 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 196
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 195 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 136
Query: 530 gggaatgccctggatcttcttcccggtcac-gggacacttgggcccgctggctctcttct 588
|||||| ||||||||||||||||||||||| ||| |||||||||||||| || |||||||
Sbjct: 135 gggaattccctggatcttcttcccggtcacggggncacttgggcccgctcgccctcttct 76
Query: 589 tggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggact 648
|||||||||||||||||||||||||||| || |||||||||||||||||||| || ||||
Sbjct: 75 tggtgtactggtacacgagcttgccacctggagtcttgacgacccgcgtctgattagact 16
Query: 649 tcgtggcatagctgt 663
|||||||||||||||
Sbjct: 15 tcgtggcatagctgt 1
>gb|CB683249.1|CB683249 OSJNEf11G05.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf11G05 5', mRNA sequence
Length = 514
Score = 420 bits (212), Expect = e-115
Identities = 317/352 (90%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| |||||||| |||||||||||||
Sbjct: 365 cttgtccttggttttctgtattttcaagactttcttcacaatcttatgctcttcaaccaa 306
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||| | ||||||||||| || ||||||||||| || ||||| |||||||||||
Sbjct: 305 gaaagcatgaatgatcctttccaaaaaagcagttccagagagcactccaccatagggacg 246
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 245 gttcacagttctgcggttcctagacaacctggatctattgtactcagcaggcctgagatg 186
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
|||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 185 gggaattccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttctt 126
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||||||||||||||| || |||||||||||||||||||| || |||||
Sbjct: 125 ggtgtactggtacacgagcttgccacctggagtcttgacgacccgcgtctgattagactt 66
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
||||||||||||||||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 65 cgtggcatagctgtgccttttgcggtacgtcaggcgctgcaccatctcgccg 14
>gb|AU160892.1|AU160892 AU160892 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52164, mRNA sequence
Length = 401
Score = 414 bits (209), Expect = e-113
Identities = 294/322 (91%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 381 ttcttgacaatcttctgctc-ttcaaccaggaaagcacggatgatcctttctctaactgc 439
||||| | |||||||||||| || ||||| ||||||||| ||||||||||| |||||||
Sbjct: 365 ttcttaanaatcttctgctccttnaaccaagaaagcacgaatgatcctttccctaactgn 306
Query: 440 agttccagatagtactcccccatagggacggttcacagttctgcggttcctagacaacct 499
||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 agttccagagagcactccaccatagggacggttcacagttctgcggttcctagacaacct 246
Query: 500 ggaccttttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcac 559
||| || ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 245 ggatctcttgtactcagcaggcctgagatggggaattccctggatcttcttcccggtcac 186
Query: 560 gggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccagg 619
||| |||||||||||||| || ||||||||||||||||||||||||||||||||||| ||
Sbjct: 185 ggggcacttgggcccgctcgccctcttcttggtgtactggtacacgagcttgccacctgg 126
Query: 620 ggtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggt 679
|||||||||||||||||||| || |||||||||||||||||||||| |||||||| ||
Sbjct: 125 agtcttgacgacccgcgtctgattagacttcgtggcatagctgtgccttttgcggtacgt 66
Query: 680 cagacgctgcaccatcttgccg 701
||| ||||||||||||| ||||
Sbjct: 65 caggcgctgcaccatctcgccg 44
>gb|CV723239.1|CV723239 root--02-P04.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone
root--02-P04, mRNA sequence
Length = 447
Score = 383 bits (193), Expect = e-103
Identities = 310/349 (88%)
Strand = Plus / Minus
Query: 348 gtcttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaacc 407
|||||||| ||||| ||||||| ||||| ||||||||||||||||||||||| || |||
Sbjct: 414 gtcttgtccttggttttctgtattttcaggaccttcttgacaatcttctgctcctcgacc 355
Query: 408 aggaaagcacggatgatcctttctctaactgcagttccagatagtactcccccataggga 467
| ||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| |||
Sbjct: 354 aagaaagcacggatgatcctttccctaactgcagttccagagagcactccaccatatgga 295
Query: 468 cggttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcaga 527
||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 294 cggttcacagtcctgcggttcctagacaacctggacctcttgtactcagcaggcctcaag 235
Query: 528 tggggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttc 587
|||||||| |||||||||||||||||||| ||||| ||||| |||||||| || ||||||
Sbjct: 234 tggggaatcccctggatcttcttcccggtgacggggcacttcggcccgctcgccctcttc 175
Query: 588 ttggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggac 647
|| |||||||||||||| ||| | ||||| |||||||||||||||| |||||||| |||
Sbjct: 174 ttcgtgtactggtacacaagcctcccacctggggtcttgacgaccctggtctggttcgac 115
Query: 648 ttcgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatct 696
|| || || |||||||| ||||| |||||||| || |||||||||||||
Sbjct: 114 ttagtcgcgtagctgtgacgcttccggtaggtgagccgctgcaccatct 66
>ref|XM_482582.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 647
Score = 383 bits (193), Expect = e-103
Identities = 310/349 (88%)
Strand = Plus / Minus
Query: 348 gtcttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaacc 407
|||||||| ||||| ||||||| ||||| ||||||||||||||||||||||| || |||
Sbjct: 421 gtcttgtccttggttttctgtattttcaggaccttcttgacaatcttctgctcctcgacc 362
Query: 408 aggaaagcacggatgatcctttctctaactgcagttccagatagtactcccccataggga 467
| ||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| |||
Sbjct: 361 aagaaagcacggatgatcctttccctaactgcagttccagagagcactccaccatatgga 302
Query: 468 cggttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcaga 527
||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 301 cggttcacagtcctgcggttcctagacaacctggacctcttgtactcagcaggcctcaag 242
Query: 528 tggggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttc 587
|||||||| |||||||||||||||||||| ||||| ||||| |||||||| || ||||||
Sbjct: 241 tggggaatcccctggatcttcttcccggtgacggggcacttcggcccgctcgccctcttc 182
Query: 588 ttggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggac 647
|| |||||||||||||| ||| | ||||| |||||||||||||||| |||||||| |||
Sbjct: 181 ttcgtgtactggtacacaagcctcccacctggggtcttgacgaccctggtctggttcgac 122
Query: 648 ttcgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatct 696
|| || || |||||||| ||||| |||||||| || |||||||||||||
Sbjct: 121 ttagtcgcgtagctgtgacgcttccggtaggtgagccgctgcaccatct 73
>gb|C74023.1|C74023 C74023 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30175_1A, mRNA sequence
Length = 437
Score = 375 bits (189), Expect = e-101
Identities = 311/349 (89%), Gaps = 2/349 (0%)
Strand = Plus / Minus
Query: 348 gtcttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaacc 407
|||||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||
Sbjct: 404 gtcttgtccttggt-ttctgtaatttcaggaccttcttgacaatcttctgctcctcgacc 346
Query: 408 aggaaagcacggatgatcctttctctaactgcagttccagatagtactcccccataggga 467
| ||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| |||
Sbjct: 345 aagaaagcacggatgatcctttccctaactgcagttccagagagcactccaccatatgga 286
Query: 468 cggttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcaga 527
||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 285 cggttcacagt-ctgcggttcctagacaacctggacctcttgtactcagcaggcctcaag 227
Query: 528 tggggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttc 587
|||||||| |||||||||||||||||||| ||||| ||||| |||||||| || ||||||
Sbjct: 226 tggggaatcccctggatcttcttcccggtgacggggcacttcggcccgctcgccctcttc 167
Query: 588 ttggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggac 647
|| |||||||||||||| ||| | ||||| |||||||||||||||| |||||||| |||
Sbjct: 166 ttcgtgtactggtacacaagcctcccacctggggtcttgacgaccctggtctggttcgac 107
Query: 648 ttcgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatct 696
|| || || |||||||| ||||| |||||||| || |||||||||||||
Sbjct: 106 ttagtcgcgtagctgtgacgcttccggtaggtgagccgctgcaccatct 58
>dbj|AK062479.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-G01, full
insert sequence
Length = 647
Score = 375 bits (189), Expect = e-101
Identities = 309/349 (88%)
Strand = Plus / Minus
Query: 348 gtcttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaacc 407
|||||||| ||||| ||||||| ||||| ||||||||||||||||||||||| || |||
Sbjct: 421 gtcttgtccttggttttctgtattttcaggaccttcttgacaatcttctgctcctcgacc 362
Query: 408 aggaaagcacggatgatcctttctctaactgcagttccagatagtactcccccataggga 467
| ||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| |||
Sbjct: 361 aagaaagcacggatgatcctttccctaactgcagttccagagagcactccaccatatgga 302
Query: 468 cggttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcaga 527
||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 301 cggttcacagtcctgcggttcctagacaacctggacctcttgtactcagcaggcctcaag 242
Query: 528 tggggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttc 587
|||||||| |||||||||||||||||||| ||||| ||||| |||||||| || ||||||
Sbjct: 241 tggggaatcccctggatcttcttcccggtgacggggcacttcggcccgctcgccctcttc 182
Query: 588 ttggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggac 647
|| |||||||||||||| ||| | ||||| ||| |||||||||||| |||||||| |||
Sbjct: 181 ttcgtgtactggtacacaagcctcccacctgggatcttgacgaccctggtctggttcgac 122
Query: 648 ttcgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatct 696
|| || || |||||||| ||||| |||||||| || |||||||||||||
Sbjct: 121 ttagtcgcgtagctgtgacgcttccggtaggtgagccgctgcaccatct 73
>gb|CF333502.1|CF333502 JMT--02-G21.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--02-G21, mRNA sequence
Length = 579
Score = 371 bits (187), Expect = e-100
Identities = 266/291 (91%), Gaps = 1/291 (0%)
Strand = Plus / Plus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 289 cttgtccttggttttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 348
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| | || || |||||||||||
Sbjct: 349 gaaagcacgaatgatcctttccctaactgcagttccagagtgcaccccaccatagggacg 408
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 409 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 468
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
|||||| |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 469 gggaattccctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttctt 528
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctg 640
||||||||||||||||||||||||||| || |||||||| |||||||||||
Sbjct: 529 ggtgtactggtacacgagcttgccacctggagtcttgac-acccgcgtctg 578
>gb|D38797.1|D38797 RICC0418A Rice callus Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 327
Score = 365 bits (184), Expect = 2e-098
Identities = 261/284 (91%), Gaps = 2/284 (0%)
Strand = Plus / Minus
Query: 420 atgatcctttctctaactgcagttcc-agatagtactcccccatagggacggttc-acag 477
||||||||||| |||||||||||||| ||| || ||||| ||||||||||||||| ||||
Sbjct: 326 atgatcctttccctaactgcagttcccagagagcactccaccatagggacggttccacag 267
Query: 478 ttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatggggaatgc 537
||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||| |
Sbjct: 266 ttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatggggaattc 207
Query: 538 cctggatcttcttcccggtcacgggacacttgggcccgctggctctcttcttggtgtact 597
||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||
Sbjct: 206 cctggatcttcttcccggtcacggggcacttgggcccgctcgccctcttcttggtgtact 147
Query: 598 ggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggacttcgtggcat 657
||||||||||||||||||| || |||||||||||||||||||| || |||||||||||||
Sbjct: 146 ggtacacgagcttgccacctggagtcttgacgacccgcgtctgattagacttcgtggcat 87
Query: 658 agctgtgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
||||||||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 86 agctgtgccttttgcggtacgtcaggcgctgcaccatctcgccg 43
>gb|AU083366.1|AU083366 AU083366 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C40045, mRNA sequence
Length = 390
Score = 365 bits (184), Expect = 2e-098
Identities = 302/340 (88%), Gaps = 1/340 (0%)
Strand = Plus / Minus
Query: 357 ttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccaggaaagca 416
||||| ||||||| ||||| |||||||||||||||||||||||||| |||| |||||||
Sbjct: 388 ttggttttctgtattttcaggaccttcttgacaatcttctgctcttcgaccaagaaagca 329
Query: 417 cggatgatcctttctctaactgcagttccagatagtactcccccatagggacggttcaca 476
|||||||||||||| |||| |||||||||||| || ||||| ||||| ||||||||||||
Sbjct: 328 cggatgatcctttccctaa-tgcagttccagagagcactccaccatatggacggttcaca 270
Query: 477 gttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatggggaatg 536
|| |||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||
Sbjct: 269 gtcctgcggttcctagacaacctggacctcttgtactcagcaggcctcaagtggggaatc 210
Query: 537 ccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttcttggtgtac 596
|||||||||||||||||||| ||||| ||||| |||||||| || |||||||| ||||||
Sbjct: 209 ccctggatcttcttcccggtgacggggcacttcggcccgctcgccctcttcttcgtgtac 150
Query: 597 tggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggacttcgtggca 656
|||||||| ||| | ||||| |||||||||||||||| |||||||| ||||| || ||
Sbjct: 149 tggtacacaagcctcccacctggggtcttgacgaccctggtctggttcgacttagtcgcg 90
Query: 657 tagctgtgccgcttgcggtaggtcagacgctgcaccatct 696
|||||||| ||||| |||||||| || |||||||||||||
Sbjct: 89 tagctgtgacgcttccggtaggtgagccgctgcaccatct 50
>gb|C91722.2|C91722 C91722 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31421_1A, mRNA sequence
Length = 449
Score = 355 bits (179), Expect = 2e-095
Identities = 310/351 (88%), Gaps = 2/351 (0%)
Strand = Plus / Minus
Query: 348 gtcttgtctttggtcttc-tgtaatttcaacaccttcttgacaatcttctgctcttcaac 406
|||||||| ||||| ||| |||| ||||| ||||||||||||||||||||||| || ||
Sbjct: 396 gtcttgtccttggttttcctgtattttcaggaccttcttgacaatcttctgctcctcgac 337
Query: 407 cag-gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagg 465
|| ||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| |
Sbjct: 336 caaagaaagcacggatgatcctttccctaactgcagttccagagagcactccaccatatg 277
Query: 466 gacggttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctca 525
||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 276 gacggttcacagtcctgcggttcctagacaacctggacctcttgtactcagcaggcctca 217
Query: 526 gatggggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctct 585
|||||||| |||||||||||||||||||| ||||| ||||| |||||||| || ||||
Sbjct: 216 agtggggaatcccctggatcttcttcccggtgacggggcacttcggcccgctcgccctct 157
Query: 586 tcttggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttgg 645
|||| |||||||||||||| ||| | ||||| |||||||||||||||| |||||||| |
Sbjct: 156 tcttcgtgtactggtacacaagcctcccacctggggtcttgacgaccctggtctggttcg 97
Query: 646 acttcgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatct 696
|||| || || |||||||| ||||| |||||||| || |||||||||||||
Sbjct: 96 acttagtcgcgtagctgtgacgcttccggtaggtgagccgctgcaccatct 46
>gb|D38960.2|D38960 RICC2984A Rice callus Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 311
Score = 329 bits (166), Expect = 1e-087
Identities = 230/250 (92%), Gaps = 1/250 (0%)
Strand = Plus / Minus
Query: 453 actcccccatagggacggttcaca-gttctgcggttcctagacaacctggaccttttgta 511
||||| |||||||||||||||| | |||||||||||||||||||||||||| || |||||
Sbjct: 308 actccaccatagggacggttcaaaagttctgcggttcctagacaacctggatctcttgta 249
Query: 512 ctcagctggcctcagatggggaatgccctggatcttcttcccggtcacgggacacttggg 571
|||||| ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 248 ctcagcaggcctgagatggggaattccctggatcttcttcccggtcacggggcacttggg 189
Query: 572 cccgctggctctcttcttggtgtactggtacacgagcttgccaccaggggtcttgacgac 631
|||||| || ||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 188 cccgctcgccctcttcttggtgtactggtacacgagcttgccacctggagtcttgacgac 129
Query: 632 ccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtcagacgctgcac 691
||||||||| || |||||||||||||||||||||| |||||||| ||||| ||||||||
Sbjct: 128 ccgcgtctgattagacttcgtggcatagctgtgccttttgcggtacgtcaggcgctgcac 69
Query: 692 catcttgccg 701
||||| ||||
Sbjct: 68 catctcgccg 59
>gb|D38966.1|D38966 RICC3087A Rice callus Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 312
Score = 327 bits (165), Expect = 5e-087
Identities = 242/270 (89%)
Strand = Plus / Minus
Query: 432 ctaactgcagttccagatagtactcccccatagggacggttcacagttctgcggttccta 491
||||||||||||||||| || || || |||||||||||||||| ||||||||||||||||
Sbjct: 308 ctaactgcagttccagagagcacnccaccatagggacggttcanagttctgcggttccta 249
Query: 492 gacaacctggaccttttgtactcagctggcctcagatggggaatgccctggatcttcttc 551
||||||||||| || |||||||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 248 gacaacctggatctcttgtactcagtaggcctgagatggggaattccctggatcttcttc 189
Query: 552 ccggtcacgggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttg 611
||||| ||||| ||||||| | |||| || ||| |||||||||| |||||||||||||||
Sbjct: 188 ccggtnacggggcacttggncncgctngccctcntcttggtgtaatggtacacgagcttg 129
Query: 612 ccaccaggggtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttg 671
||||| || |||||||||||||||||||| || |||||||||||||||||||||| |||
Sbjct: 128 ccacctggagtcttgacgacccgcgtctgattagacttcgtggcatagctgtgccttttg 69
Query: 672 cggtaggtcagacgctgcaccatcttgccg 701
||||| ||||| ||||||||||||| ||||
Sbjct: 68 cggtacgtcaggcgctgcaccatctcgccg 39
>gb|CF298215.1|CF298215 7LEAF--01-I04.b1 Rice leaf plasmid cDNA library II (7LEAF) Oryza
sativa (japonica cultivar-group) cDNA clone
7LEAF--01-I04, mRNA sequence
Length = 501
Score = 309 bits (156), Expect = 1e-081
Identities = 210/228 (92%)
Strand = Plus / Plus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 269 cttgtccttggttttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 328
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 329 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 388
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 389 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 448
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgct 577
|||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 449 gggaattccctggatcttcttcccggtcacggggcacttgggcccgct 496
>gb|CF319099.1|CF319099 HD--09-H19.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--09-H19, mRNA sequence
Length = 501
Score = 309 bits (156), Expect = 1e-081
Identities = 210/228 (92%)
Strand = Plus / Plus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 268 cttgtccttggttttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 327
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 328 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 387
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 388 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 447
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgct 577
|||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 448 gggaattccctggatcttcttcccggtcacggggcacttgggcccgct 495
>gb|CV731034.1|CV731034 FLO--04-O02.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--04-O02,
mRNA sequence
Length = 496
Score = 309 bits (156), Expect = 1e-081
Identities = 210/228 (92%)
Strand = Plus / Plus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 267 cttgtccttggttttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 326
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 327 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 386
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 387 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 446
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgct 577
|||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 447 gggaattccctggatcttcttcccggtcacggggcacttgggcccgct 494
>gb|AU165721.1|AU165721 AU165721 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E4194, mRNA sequence
Length = 572
Score = 301 bits (152), Expect = 3e-079
Identities = 299/348 (85%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||||||||| | |||||||||||||| |||||||||||||| || ||||
Sbjct: 372 cttgtccttggtcttctggatcttcaacaccttcttcacaatcttctgctcctcgaccaa 313
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||| ||||||||||| ||||| |||||||| ||||| || || || || || |||||
Sbjct: 312 aaaagcccggatgatcctctctctgactgcagtaccagacaggacaccaccgtaaggacg 253
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
|||||| || ||||| ||||| ||||| |||||||| ||||||||||| || ||||| ||
Sbjct: 252 gttcacggtcctgcgattccttgacaatctggacctcttgtactcagcaggtctcaggtg 193
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
||||| || ||||||||||||||||| || || || || |||||||| || | ||||||
Sbjct: 192 tggaattccttggatcttcttcccggtgactgggcatttcggcccgctcgcccgcttctt 133
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||| ||| | ||||| |||||||||||||| || ||||||||||| ||
Sbjct: 132 ggtgtactggtacacaagcctcccaccgggggtcttgacgacgcgggtctggttggattt 73
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatctt 697
|||||| |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 72 cgtggcgtagctgtgccgcttccggtaggtcagccgctgcaccatctt 25
>dbj|AK103424.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128K17, full
insert sequence
Length = 666
Score = 301 bits (152), Expect = 3e-079
Identities = 299/348 (85%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||||||||| | |||||||||||||| |||||||||||||| || ||||
Sbjct: 420 cttgtccttggtcttctggatcttcaacaccttcttcacaatcttctgctcctcgaccaa 361
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||| ||||||||||| ||||| |||||||| ||||| || || || || || |||||
Sbjct: 360 aaaagcccggatgatcctctctctgactgcagtaccagacaggacaccaccgtaaggacg 301
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
|||||| || ||||| ||||| ||||| |||||||| ||||||||||| || ||||| ||
Sbjct: 300 gttcacggtcctgcgattccttgacaatctggacctcttgtactcagcaggtctcaggtg 241
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
||||| || ||||||||||||||||| || || || || |||||||| || | ||||||
Sbjct: 240 tggaattccttggatcttcttcccggtgactgggcatttcggcccgctcgcccgcttctt 181
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||| ||| | ||||| |||||||||||||| || ||||||||||| ||
Sbjct: 180 ggtgtactggtacacaagcctcccaccgggggtcttgacgacgcgggtctggttggattt 121
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatctt 697
|||||| |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 120 cgtggcgtagctgtgccgcttccggtaggtcagccgctgcaccatctt 73
>ref|XM_480178.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 666
Score = 301 bits (152), Expect = 3e-079
Identities = 299/348 (85%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||||||||| | |||||||||||||| |||||||||||||| || ||||
Sbjct: 420 cttgtccttggtcttctggatcttcaacaccttcttcacaatcttctgctcctcgaccaa 361
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||| ||||||||||| ||||| |||||||| ||||| || || || || || |||||
Sbjct: 360 aaaagcccggatgatcctctctctgactgcagtaccagacaggacaccaccgtaaggacg 301
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
|||||| || ||||| ||||| ||||| |||||||| ||||||||||| || ||||| ||
Sbjct: 300 gttcacggtcctgcgattccttgacaatctggacctcttgtactcagcaggtctcaggtg 241
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
||||| || ||||||||||||||||| || || || || |||||||| || | ||||||
Sbjct: 240 tggaattccttggatcttcttcccggtgactgggcatttcggcccgctcgcccgcttctt 181
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||| ||| | ||||| |||||||||||||| || ||||||||||| ||
Sbjct: 180 ggtgtactggtacacaagcctcccaccgggggtcttgacgacgcgggtctggttggattt 121
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatctt 697
|||||| |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 120 cgtggcgtagctgtgccgcttccggtaggtcagccgctgcaccatctt 73
>gb|AU064155.1|AU064155 AU064155 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3982_1A, mRNA sequence
Length = 460
Score = 295 bits (149), Expect = 2e-077
Identities = 298/348 (85%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||||||||| | |||||||||||||| |||||||||||||| || ||||
Sbjct: 373 cttgtccttggtcttctggatcttcaacaccttcttcacaatcttctgctcctcgaccaa 314
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||| ||||||||||| ||||| |||||||| ||||| || || || || || |||||
Sbjct: 313 aaaagcccggatgatcctctctctgactgcagtaccagacaggacaccaccgtaaggacg 254
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
|||||| || ||||| ||||| ||||| |||||||| ||||||||||| || ||||| ||
Sbjct: 253 gttcacggtcctgcgattccttgacaatctggacctcttgtactcagcaggtctcaggtg 194
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
||||| || ||||||||||||||||| || || || || |||||||| || | ||||||
Sbjct: 193 tggaattccttggatcttcttcccggtgactgggcatttcggcccgctcgcccgcttctt 134
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
|||||||||||| || ||| | ||||| |||||||||||||| || ||||||||||| ||
Sbjct: 133 ggtgtactggtanacaagcctcccaccgggggtcttgacgacgcgggtctggttggattt 74
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatctt 697
|||||| |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 73 cgtggcgtagctgtgccgcttccggtaggtcagccgctgcaccatctt 26
>gb|D16082.1|D16082 RICC2993A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2993A, mRNA sequence
Length = 359
Score = 289 bits (146), Expect = 1e-075
Identities = 281/326 (86%)
Strand = Plus / Minus
Query: 372 ttcaacaccttcttgacaatcttctgctcttcaaccaggaaagcacggatgatcctttct 431
|||||||||||||| |||||||||||||| || |||| ||||| ||||||||||| |||
Sbjct: 356 ttcaacaccttcttcacaatcttctgctcctcgaccaaaaaagcccggatgatcctctct 297
Query: 432 ctaactgcagttccagatagtactcccccatagggacggttcacagttctgcggttccta 491
|| |||||||| ||||| || || || || || ||||||||||| || ||||| |||||
Sbjct: 296 ctgactgcagtaccagacaggacaccaccgtaaggacggttcacggtcctgcgattcctt 237
Query: 492 gacaacctggaccttttgtactcagctggcctcagatggggaatgccctggatcttcttc 551
||||| |||||||| ||||||||||| || ||||| || ||||| || ||||||||||||
Sbjct: 236 gacaatctggacctcttgtactcagcaggtctcaggtgtggaattccttggatcttcttc 177
Query: 552 ccggtcacgggacacttgggcccgctggctctcttcttggtgtactggtacacgagcttg 611
||||| || || || || |||||||| || | ||||||||||||||||||||| ||| |
Sbjct: 176 ccggtgactgggcatttcggcccgctcgcccgcttcttggtgtactggtacacaagcctc 117
Query: 612 ccaccaggggtcttgacgacccgcgtctggttggacttcgtggcatagctgtgccgcttg 671
||||| |||||||||||||| || ||||||||||| |||||||| ||||||||||||||
Sbjct: 116 ccaccgggggtcttgacgacgcgggtctggttggatttcgtggcgtagctgtgccgcttc 57
Query: 672 cggtaggtcagacgctgcaccatctt 697
||||||||||| ||||||||||||||
Sbjct: 56 cggtaggtcagccgctgcaccatctt 31
>gb|CV734251.1|CV734251 FLO--09-I12.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--09-I12,
mRNA sequence
Length = 518
Score = 289 bits (146), Expect = 1e-075
Identities = 203/222 (91%)
Strand = Plus / Plus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 297 cttgtccttggttttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 356
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 357 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 416
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
|||||||||||||||||||||| |||||||||| || ||||||||||| ||||| |||||
Sbjct: 417 gttcacagttctgcggttcctaaacaacctggatctcttgtactcagcaggcctgagatg 476
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttggg 571
|||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 477 gggaattccctggatcttcttcccggtcacggggcacttggg 518
>gb|C93460.1|C93460 C93460 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C50722_1A, mRNA sequence
Length = 458
Score = 283 bits (143), Expect = 7e-074
Identities = 296/348 (85%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||||||||| | |||||||||||||| |||||| ||||||| || ||||
Sbjct: 409 cttgtcnttggtcttctggatcttcaacaccttcttcacaatcntctgctcctcgaccaa 350
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||| |||||||||| ||||| |||||||| ||||| || || || || || |||||
Sbjct: 349 aaaagccnggatgatcctctctctgactgcagtaccagacaggacaccaccgtaaggacg 290
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
|||||| || ||||| ||||| ||||| |||||||| ||||||||||| || ||||| ||
Sbjct: 289 gttcacggtcctgcgattccttgacaatctggacctcttgtactcagcaggtctcaggtg 230
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
||||| || ||||||||||||||||| || || || || ||| |||| || | ||||||
Sbjct: 229 tggaattccttggatcttcttcccggtgactgggcatttcggcacgctcgcccgcttctt 170
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||| ||| | ||||| |||||||||||||| || ||||||||||| ||
Sbjct: 169 ggtgtactggtacacaagcctcccaccgggggtcttgacgacgcgggtctggttggattt 110
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatctt 697
|||||| |||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 109 cgtggcgtagctgtgccgcttccggtaggtcagccgctgcaccatctt 62
>gb|CV731033.1|CV731033 FLO--04-O02.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--04-O02,
mRNA sequence
Length = 338
Score = 276 bits (139), Expect = 2e-071
Identities = 212/235 (90%), Gaps = 1/235 (0%)
Strand = Plus / Minus
Query: 468 cggttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcaga 527
||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||
Sbjct: 334 cggttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgaga 275
Query: 528 tggggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttc 587
|||||||| |||||||||||||||||||||||||| |||||||||||||| || || |||
Sbjct: 274 tggggaattccctggatcttcttcccggtcacggggcacttgggcccgctcgccctattc 215
Query: 588 ttggtgtactggtacacgagcttgccaccaggggtcttgacgacccgc-gtctggttgga 646
||||||||||||||||||||||||||||| || ||||||||||||||| || | ||
Sbjct: 214 ttggtgtactggtacacgagcttgccacctggagtcttgacgacccgcagtagattaaga 155
Query: 647 cttcgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatcttgccg 701
|||||||||||||||||||| |||||||| ||||| ||||||||||||| ||||
Sbjct: 154 cttcgtggcatagctgtgccttttgcggtacgtcaggcgctgcaccatctcgccg 100
>gb|AU094793.1|AU094793 AU094793 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31680, mRNA sequence
Length = 713
Score = 270 bits (136), Expect = 1e-069
Identities = 297/348 (85%), Gaps = 2/348 (0%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||||||||| | |||||||||||||| |||||||||||||| || ||||
Sbjct: 464 cttgtccttggtcttctggatcttcaacaccttcttcacaatcttctgctcctcgaccaa 405
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||| ||||||||||| ||||| |||||||| ||||| || || || || || |||||
Sbjct: 404 aaaagcccggatgatcctctctctgactgcagtaccagacaggacaccaccgtaaggacg 345
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
|||||| || ||||| ||||| ||||| |||||||| ||||||||||| || ||||| ||
Sbjct: 344 gttcacggtcctgcgattccttgacaatctggacctcttgtactcagcaggtctcaggtg 285
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
||||| || ||||||||||||||||| || || || || |||||||| || | ||||||
Sbjct: 284 tggaattccttggatcttcttcccggtgactgggcatttcggcccgctcgcccgcttctt 225
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||| ||| | ||||| |||||||||||||| || ||||||||||| ||
Sbjct: 224 ggtgtactggtacacaagcctcccaccgggggtcttgacgacgcgggtctggttggattt 165
Query: 650 cgtggcatagctgtgccgcttgcggtaggtcagacgctgcaccatctt 697
|||||| || ||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 164 cgtggcgta-ctgtgccgcttccggta-gtcagccgctgcaccatctt 119
>gb|AU172951.1|AU172951 AU172951 Rice immature leaf including apical meristem (under long
day condition) Oryza sativa (japonica cultivar-group)
cDNA clone E50379, mRNA sequence
Length = 447
Score = 266 bits (134), Expect = 2e-068
Identities = 298/350 (85%), Gaps = 2/350 (0%)
Strand = Plus / Minus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||||||||| | |||||||||||||| |||||||||||||| || ||||
Sbjct: 377 cttgtccttggtcttctggatcttcaacaccttcttcacaatcttctgctcctcgaccaa 318
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||| | ||||||||||| ||||| |||||||| ||||| || || || || || |||||
Sbjct: 317 aaaaacccggatgatcctctctctgactgcagtaccagacaggacaccaccgtaaggacg 258
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
|||||| || ||||| ||||| ||||| |||||||| ||||||||||| || ||||| ||
Sbjct: 257 gttcacggtcctgcgattccttgacaatctggacctcttgtactcagcaggtctcaggtg 198
Query: 530 gggaatgccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttctt 589
||||| || ||||||||||||||||| || || || || |||||||| || | ||||||
Sbjct: 197 tggaattccttggatcttcttcccggtgactgggcatttcggcccgctcgcccgcttctt 138
Query: 590 ggtgtactggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggactt 649
||||||||||||||| ||| | ||||| |||||||||||||| || ||||||||||| ||
Sbjct: 137 ggtgtactggtacacaagcctcccaccgggggtcttgacgacgcgggtctggttggattt 78
Query: 650 c-gtggcatagctgtgccgcttgcggtaggtcagac-gctgcaccatctt 697
| ||||| |||||||||||||| ||||||||||| | |||||||||||||
Sbjct: 77 ctgtggcgtagctgtgccgcttccggtaggtcagcctgctgcaccatctt 28
>gb|D23601.1|D23601 RICC3071A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C3071_1A, mRNA sequence
Length = 341
Score = 262 bits (132), Expect = 3e-067
Identities = 266/311 (85%)
Strand = Plus / Minus
Query: 387 acaatcttctgctcttcaaccaggaaagcacggatgatcctttctctaactgcagttcca 446
|||||||||||||| || |||| ||||| ||||||||||| ||||| |||||||| | |
Sbjct: 341 acaatcttctgctcctcgaccaaaaaagcccggatgatcctctctctgactgcagtacna 282
Query: 447 gatagtactcccccatagggacggttcacagttctgcggttcctagacaacctggacctt 506
|| || || || || || ||||||||||| || ||||| ||||| ||||| ||||||||
Sbjct: 281 gacaggacaccaccgtaaggacggttcacggtcctgcgattccttgacaatctggacctc 222
Query: 507 ttgtactcagctggcctcagatggggaatgccctggatcttcttcccggtcacgggacac 566
||||||||||| || ||||| || ||||| || ||||||||||||||||| || || ||
Sbjct: 221 ttgtactcagcaggtctcaggtgtggaattccttggatcttcttcccggtgactgggcat 162
Query: 567 ttgggcccgctggctctcttcttggtgtactggtacacgagcttgccaccaggggtcttg 626
|| |||||||| || | ||||||||||||||||||||| ||| | ||||| |||||||||
Sbjct: 161 ttcggcccgctcgcccgcttcttggtgtactggtacacaagcctcccaccgggggtcttg 102
Query: 627 acgacccgcgtctggttggacttcgtggcatagctgtgccgcttgcggtaggtcagacgc 686
||||| || ||||||||||| |||||||| |||||||||||||| ||||||||||| |||
Sbjct: 101 acgacgcgggtctggttggatttcgtggcgtagctgtgccgcttccggtaggtcagccgc 42
Query: 687 tgcaccatctt 697
|||||||||||
Sbjct: 41 tgcaccatctt 31
>gb|AU064190.1|AU064190 AU064190 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E4194_1A, mRNA sequence
Length = 350
Score = 248 bits (125), Expect = 4e-063
Identities = 242/281 (86%)
Strand = Plus / Minus
Query: 417 cggatgatcctttctctaactgcagttccagatagtactcccccatagggacggttcaca 476
||||||||||| ||||| |||||||| ||||| || || || || || |||||||||||
Sbjct: 306 cggatgatcctctctctgactgcagtaccagacaggacaccaccgtaaggacggttcacg 247
Query: 477 gttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatggggaatg 536
|| ||||| ||||| ||||| |||||||| ||||||||||| || ||||| || |||||
Sbjct: 246 gtcctgcgattccttgacaatctggacctcttgtactcagcaggtctcaggtgtggaatt 187
Query: 537 ccctggatcttcttcccggtcacgggacacttgggcccgctggctctcttcttggtgtac 596
|| ||||||||||||||||| || || || || |||||||| || | |||||||||||||
Sbjct: 186 ccttggatcttcttcccggtgactgggcatttcggcccgctcgcccgcttcttggtgtac 127
Query: 597 tggtacacgagcttgccaccaggggtcttgacgacccgcgtctggttggacttcgtggca 656
|||||||| ||| | ||||| |||||||||||||| || ||||||||||| ||||||||
Sbjct: 126 tggtacacaagcctcccaccgggggtcttgacgacgcgggtctggttggatttcgtggcg 67
Query: 657 tagctgtgccgcttgcggtaggtcagacgctgcaccatctt 697
|||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 66 tagctgtgccgcttccggtaggtcagccgctgcaccatctt 26
>gb|CF291396.1|CF291396 14ROOT--01-M21.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-M21, mRNA sequence
Length = 476
Score = 244 bits (123), Expect = 6e-062
Identities = 174/191 (91%)
Strand = Plus / Plus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 286 cttgtccttggttttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 345
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 346 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 405
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
||||||||||||||||||||||||||||||||| || ||||||||||| ||||| |||||
Sbjct: 406 gttcacagttctgcggttcctagacaacctggatctcttgtactcagcaggcctgagatg 465
Query: 530 gggaatgccct 540
|||||| ||||
Sbjct: 466 gggaattccct 476
>gb|CV728926.1|CV728926 FLO--01-H24.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--01-H24,
mRNA sequence
Length = 510
Score = 244 bits (123), Expect = 6e-062
Identities = 177/195 (90%)
Strand = Plus / Plus
Query: 350 cttgtctttggtcttctgtaatttcaacaccttcttgacaatcttctgctcttcaaccag 409
|||||| ||||| ||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct: 316 cttgtccttggttttctgtattttcaagactttcttcacaatcttctgctcttcaaccaa 375
Query: 410 gaaagcacggatgatcctttctctaactgcagttccagatagtactcccccatagggacg 469
||||||||| ||||||||||| ||||||||||||||||| || ||||| |||||||||||
Sbjct: 376 gaaagcacgaatgatcctttccctaactgcagttccagagagcactccaccatagggacg 435
Query: 470 gttcacagttctgcggttcctagacaacctggaccttttgtactcagctggcctcagatg 529
|||||||||||||||||||||| |||||||||| || ||||||||||| ||||| |||||
Sbjct: 436 gttcacagttctgcggttcctaaacaacctggatctcttgtactcagcaggcctgagatg 495
Query: 530 gggaatgccctggat 544
|||||| ||||||||
Sbjct: 496 gggaattccctggat 510
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,117,172
Number of Sequences: 438736
Number of extensions: 1117172
Number of successful extensions: 7607
Number of sequences better than 0.5: 85
Number of HSP's better than 0.5 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7196
Number of HSP's gapped (non-prelim): 394
length of query: 803
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 782
effective length of database: 2,791,206,460
effective search space: 2182723451720
effective search space used: 2182723451720
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)