BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2542097.2.1
(887 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK067406.1| Oryza sativa (japonica cultivar-group) cDNA... 486 e-134
ref|XM_475374.1| Oryza sativa (japonica cultivar-group), p... 486 e-134
dbj|AK099763.1| Oryza sativa (japonica cultivar-group) cDNA... 478 e-132
dbj|AK074018.1| Oryza sativa (japonica cultivar-group) cDNA... 400 e-109
gb|AU065597.1|AU065597 AU065597 Rice cDNA from immature lea... 349 2e-093
gb|CV725138.1|CV725138 14Salt--02-B03.g1 Salt treated rice ... 349 2e-093
dbj|AK121750.1| Oryza sativa (japonica cultivar-group) cDNA... 349 2e-093
ref|NM_193707.1| Oryza sativa (japonica cultivar-group), p... 349 2e-093
gb|AU058259.1|AU058259 AU058259 Oryza sativa Nipponbare imm... 333 1e-088
gb|AU183330.1|AU183330 AU183330 Rice cDNA from immature lea... 333 1e-088
gb|AU094183.1|AU094183 AU094183 Rice panicle at flowering s... 329 1e-087
gb|AU173102.1|AU173102 AU173102 Rice root Oryza sativa (jap... 327 6e-087
gb|AU029353.1|AU029353 AU029353 Rice panicle shorter than 3... 313 9e-083
gb|AU065295.1|AU065295 AU065295 Rice cDNA from immature lea... 313 9e-083
gb|C74363.1|C74363 C74363 Rice panicle shorter than 3cm Ory... 309 1e-081
gb|AU029320.1|AU029320 AU029320 Rice panicle shorter than 3... 307 5e-081
gb|D23029.1|D23029 RICC2067A Rice callus Oryza sativa (japo... 272 3e-070
gb|AU095387.1|AU095387 AU095387 Rice cDNA from immature lea... 270 1e-069
gb|AU165979.1|AU165979 AU165979 Rice panicle shorter than 3... 260 1e-066
gb|AC117265.2| Oryza sativa (japonica cultivar-group) chrom... 260 1e-066
gb|AC108876.2| Oryza sativa (japonica cultivar-group) chrom... 260 1e-066
gb|AACV01012352.1| Oryza sativa (japonica cultivar-group) c... 260 1e-066
ref|NT_107213.1| Oryza sativa (japonica cultivar-group) 260 1e-066
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 260 1e-066
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 260 1e-066
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 260 1e-066
gb|C74013.1|C74013 C74013 Rice panicle shorter than 3cm Ory... 246 2e-062
gb|AU092780.1|AU092780 AU092780 Rice callus Oryza sativa (j... 244 7e-062
gb|C96964.1|C96964 C96964 Rice callus Oryza sativa (japonic... 226 2e-056
gb|AU063029.2|AU063029 AU063029 Rice callus Oryza sativa (j... 226 2e-056
gb|C93673.1|C93673 C93673 Rice panicle at flowering stage O... 224 6e-056
gb|AU029352.1|AU029352 AU029352 Rice panicle shorter than 3... 222 3e-055
gb|AU164949.1|AU164949 AU164949 Rice cDNA from immature lea... 220 1e-054
gb|AU064367.1|AU064367 AU064367 Rice panicle shorter than 3... 218 4e-054
gb|C27961.1|C27961 C27961 Rice callus cDNA Oryza sativa (ja... 214 6e-053
gb|AQ257917.1|AQ257917 nbxb0019G10r CUGI Rice BAC Library O... 212 2e-052
gb|AACV01010765.1| Oryza sativa (japonica cultivar-group) c... 212 2e-052
ref|XM_475081.1| Oryza sativa (japonica cultivar-group), p... 212 2e-052
ref|NT_079870.2| Oryza sativa (japonica cultivar-group) 212 2e-052
gb|AC093921.2| Oryza sativa (japonica cultivar-group) chrom... 212 2e-052
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 212 2e-052
gb|D16020.1|D16020 RICC2034A Rice callus Oryza sativa (japo... 208 4e-051
gb|AU165995.1|AU165995 AU165995 Rice panicle shorter than 3... 208 4e-051
gb|AU095388.1|AU095388 AU095388 Rice cDNA from immature lea... 202 2e-049
gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbar... 196 1e-047
gb|AACV01001262.1| Oryza sativa (japonica cultivar-group) c... 196 1e-047
gb|AACV01006345.1| Oryza sativa (japonica cultivar-group) c... 196 1e-047
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 196 1e-047
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 196 1e-047
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 196 1e-047
dbj|AP003144.1| Oryza sativa (japonica cultivar-group) geno... 196 1e-047
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 196 1e-047
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 196 1e-047
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 196 1e-047
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 196 1e-047
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 196 1e-047
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 196 1e-047
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 196 1e-047
gb|C26889.1|C26889 C26889 Rice callus cDNA Oryza sativa (ja... 190 9e-046
gb|C27418.1|C27418 C27418 Rice callus cDNA Oryza sativa (ja... 190 9e-046
gb|CV722803.1|CV722803 root--01-J22.g1 Rice root lambda pha... 186 1e-044
gb|AU161135.1|AU161135 AU161135 Rice callus Oryza sativa (j... 184 5e-044
dbj|AK121752.1| Oryza sativa (japonica cultivar-group) cDNA... 180 9e-043
gb|C74395.1|C74395 C74395 Rice panicle shorter than 3cm Ory... 178 3e-042
gb|AU029997.1|AU029997 AU029997 Rice cDNA from immature lea... 176 1e-041
gb|CV724330.1|CV724330 root--06-K12.g1 Rice root lambda pha... 176 1e-041
gb|AU184065.1|AU184065 AU184065 Rice root Oryza sativa (jap... 174 5e-041
gb|AU181543.1|AU181543 AU181543 Rice callus (2001) Oryza sa... 170 8e-040
gb|D39663.1|D39663 RICS1216A Rice shoot Oryza sativa (japon... 165 5e-038
gb|D15670.1|D15670 RICC1060A Rice callus Oryza sativa (japo... 165 5e-038
gb|AU108901.1|AU108901 AU108901 Rice callus Oryza sativa (j... 165 5e-038
gb|AU092411.1|AU092411 AU092411 Rice callus Oryza sativa (j... 163 2e-037
dbj|AK064299.1| Oryza sativa (japonica cultivar-group) cDNA... 163 2e-037
gb|AU031646.1|AU031646 AU031646 Rice root Oryza sativa (jap... 157 1e-035
gb|D49327.1|D49327 RICS16555A Rice green shoot Oryza sativa... 153 2e-034
gb|AU092838.1|AU092838 AU092838 Rice callus Oryza sativa (j... 151 8e-034
gb|AU065292.1|AU065292 AU065292 Rice cDNA from immature lea... 149 3e-033
gb|C27638.1|C27638 C27638 Rice callus cDNA Oryza sativa (ja... 147 1e-032
gb|C24790.1|C24790 C24790 Rice green shoot Oryza sativa (ja... 145 5e-032
gb|AU088594.2|AU088594 AU088594 Rice callus Oryza sativa (j... 145 5e-032
gb|D23779.1|D23779 RICR0134A Rice root Oryza sativa (japoni... 143 2e-031
gb|AU062779.1|AU062779 AU062779 Rice callus Oryza sativa (j... 141 7e-031
gb|C96963.1|C96963 C96963 Rice callus Oryza sativa (japonic... 139 3e-030
ref|XM_482492.1| Oryza sativa (japonica cultivar-group), mRNA 137 1e-029
gb|AACV01008758.1| Oryza sativa (japonica cultivar-group) c... 135 5e-029
ref|NT_107203.1| Oryza sativa (japonica cultivar-group) 135 5e-029
gb|CH401185.1| Oryza sativa (japonica cultivar-group) chrom... 135 5e-029
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 135 5e-029
emb|AL662960.3|OSJN00162 Oryza sativa genomic DNA, chromoso... 135 5e-029
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 135 5e-029
gb|C98351.1|C98351 C98351 Rice callus Oryza sativa (japonic... 131 7e-028
gb|D15213.1|D15213 RICC0278A Rice callus Oryza sativa (japo... 125 4e-026
gb|C28099.1|C28099 C28099 Rice callus cDNA Oryza sativa (ja... 123 2e-025
gb|AU163812.1|AU163812 AU163812 Rice panicle at ripening st... 121 7e-025
gb|AU062823.2|AU062823 AU062823 Rice callus Oryza sativa (j... 119 3e-024
dbj|AK058913.1| Oryza sativa (japonica cultivar-group) cDNA... 119 3e-024
dbj|AK071511.1| Oryza sativa (japonica cultivar-group) cDNA... 119 3e-024
gb|AU064387.1|AU064387 AU064387 Rice panicle shorter than 3... 117 1e-023
gb|AU082124.1|AU082124 AU082124 Rice mature leaf Oryza sati... 117 1e-023
dbj|AK058540.1| Oryza sativa (japonica cultivar-group) cDNA... 117 1e-023
dbj|AK099888.1| Oryza sativa (japonica cultivar-group) cDNA... 117 1e-023
ref|XM_478632.1| Oryza sativa (japonica cultivar-group), mRNA 117 1e-023
gb|C29072.2|C29072 C29072 Rice callus cDNA Oryza sativa (ja... 115 4e-023
gb|AU165972.1|AU165972 AU165972 Rice panicle shorter than 3... 113 2e-022
gb|AQ856294.1|AQ856294 nbeb0001P11f CUGI Rice BAC Library (... 107 1e-020
dbj|AP003926.1| Oryza sativa (japonica cultivar-group) chro... 107 1e-020
dbj|AP003898.3| Oryza sativa (japonica cultivar-group) geno... 107 1e-020
dbj|AP005734.4| Oryza sativa (japonica cultivar-group) geno... 107 1e-020
emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC O... 107 1e-020
emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC O... 107 1e-020
gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic ... 107 1e-020
ref|NT_079837.2| Oryza sativa (japonica cultivar-group) 107 1e-020
gb|AACV01007816.1| Oryza sativa (japonica cultivar-group) c... 107 1e-020
gb|AACV01018502.1| Oryza sativa (japonica cultivar-group) c... 107 1e-020
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 107 1e-020
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 107 1e-020
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 107 1e-020
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 107 1e-020
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 107 1e-020
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 107 1e-020
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 107 1e-020
gb|AF377946.3| Oryza sativa (japonica cultivar-group) chrom... 107 1e-020
gb|AC146936.4| Oryza sativa (japonica cultivar-group) chrom... 107 1e-020
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 107 1e-020
gb|AU029343.1|AU029343 AU029343 Rice panicle shorter than 3... 103 2e-019
gb|AU029451.1|AU029451 AU029451 Rice panicle shorter than 3... 103 2e-019
gb|AU075429.1|AU075429 AU075429 Rice panicle shorter than 3... 103 2e-019
gb|CB681474.1|CB681474 OSJNEf07M04.r OSJNEf Oryza sativa (j... 103 2e-019
gb|CF280135.1|CF280135 14ETL--06-L01.b1 Rice etiolated leaf... 103 2e-019
gb|CF290894.1|CF290894 14ROOT--01-B17.g1 Rice root plasmid ... 103 2e-019
gb|CF294301.1|CF294301 30DGS--03-M13.b1 Rice leaf plasmid c... 103 2e-019
gb|CF297052.1|CF297052 30DGS--07-K23.b1 Rice leaf plasmid c... 103 2e-019
gb|CF304442.1|CF304442 ABF1--04-P18.g1 ABF3-overexpressing ... 103 2e-019
gb|CD670801.1|CD670801 OsMR219 5MT resistant rice mutant cD... 103 2e-019
gb|CV724855.1|CV724855 14Salt--01-K12.b1 Salt treated rice ... 103 2e-019
gb|CV726853.1|CV726853 14Salt--04-L09.b1 Salt treated rice ... 103 2e-019
dbj|AK059228.1| Oryza sativa (japonica cultivar-group) cDNA... 103 2e-019
ref|XM_478633.1| Oryza sativa (japonica cultivar-group), mRNA 103 2e-019
gb|C27557.1|C27557 C27557 Rice callus cDNA Oryza sativa (ja... 98 1e-017
gb|AU029344.1|AU029344 AU029344 Rice panicle shorter than 3... 98 1e-017
gb|CB648097.1|CB648097 OSJNEb11F09.r OSJNEb Oryza sativa (j... 96 4e-017
gb|CF281327.1|CF281327 14ETL--08-F12.g1 Rice etiolated leaf... 96 4e-017
gb|AU161038.1|AU161038 AU161038 Rice callus Oryza sativa (j... 94 2e-016
gb|CF295996.1|CF295996 30DGS--06-C22.b1 Rice leaf plasmid c... 94 2e-016
gb|AACV01025103.1| Oryza sativa (japonica cultivar-group) c... 94 2e-016
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 94 2e-016
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 94 2e-016
gb|AQ869379.1|AQ869379 nbeb0035O07f CUGI Rice BAC Library (... 92 6e-016
gb|AU082125.1|AU082125 AU082125 Rice mature leaf Oryza sati... 92 6e-016
emb|AL731753.2|CNS08C82 Oryza sativa chromosome 12, . BAC O... 92 6e-016
ref|NT_107148.1| Oryza sativa (japonica cultivar-group) 92 6e-016
gb|AACV01024664.1| Oryza sativa (japonica cultivar-group) c... 92 6e-016
gb|CH401274.1| Oryza sativa (japonica cultivar-group) chrom... 92 6e-016
gb|C29143.1|C29143 C29143 Rice callus cDNA Oryza sativa (ja... 90 2e-015
gb|AU029845.1|AU029845 AU029845 Rice cDNA from immature lea... 90 2e-015
gb|C19842.1|C19842 C19842 Rice panicle at ripening stage Or... 86 4e-014
gb|AU164203.1|AU164203 AU164203 Rice panicle (longer than 1... 84 1e-013
dbj|AP003838.3| Oryza sativa (japonica cultivar-group) geno... 84 1e-013
gb|AACV01016514.1| Oryza sativa (japonica cultivar-group) c... 84 1e-013
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 84 1e-013
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 84 1e-013
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 84 1e-013
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 84 1e-013
dbj|AP004651.3| Oryza sativa (japonica cultivar-group) geno... 82 6e-013
dbj|AP005107.3| Oryza sativa (japonica cultivar-group) geno... 82 6e-013
gb|AACV01013428.1| Oryza sativa (japonica cultivar-group) c... 82 6e-013
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 82 6e-013
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 82 6e-013
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 82 6e-013
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 82 6e-013
gb|CF293778.1|CF293778 30DGS--03-B08.b1 Rice leaf plasmid c... 80 2e-012
gb|AU029535.1|AU029535 AU029535 Rice panicle shorter than 3... 78 9e-012
gb|AQ913224.1|AQ913224 nbeb0040H19f CUGI Rice BAC Library (... 76 4e-011
gb|AU069668.1|AU069668 AU069668 Rice callus Oryza sativa (j... 74 1e-010
gb|AU182006.1|AU182006 AU182006 Rice callus (2001) Oryza sa... 74 1e-010
dbj|AP005097.3| Oryza sativa (japonica cultivar-group) geno... 74 1e-010
gb|AC119796.2| Oryza sativa (japonica cultivar-group) chrom... 74 1e-010
gb|AACV01003928.1| Oryza sativa (japonica cultivar-group) c... 74 1e-010
gb|AACV01005867.1| Oryza sativa (japonica cultivar-group) c... 74 1e-010
ref|XM_481315.1| Oryza sativa (japonica cultivar-group), mRNA 74 1e-010
ref|NT_079917.2| Oryza sativa (japonica cultivar-group) 74 1e-010
dbj|AP005383.3| Oryza sativa (japonica cultivar-group) geno... 74 1e-010
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 74 1e-010
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 74 1e-010
gb|AU163384.1|AU163384 AU163384 Rice callus Oryza sativa (j... 72 6e-010
gb|AC087839.9| Oryza sativa (japonica cultivar-group) chrom... 66 3e-008
gb|AACV01016567.1| Oryza sativa (japonica cultivar-group) c... 66 3e-008
dbj|AP005195.3| Oryza sativa (japonica cultivar-group) geno... 66 3e-008
gb|D16048.1|D16048 RICC2424A Rice callus Oryza sativa (japo... 62 5e-007
gb|AU058153.1|AU058153 AU058153 Oryza sativa Nipponbare imm... 62 5e-007
gb|CF335579.1|CF335579 JMT--05-E23.g1 AtJMT-overexpressing ... 62 5e-007
gb|C28955.1|C28955 C28955 Rice callus cDNA Oryza sativa (ja... 58 8e-006
gb|C97967.1|C97967 C97967 Rice callus Oryza sativa (japonic... 56 3e-005
gb|AU092621.1|AU092621 AU092621 Rice callus Oryza sativa (j... 56 3e-005
gb|D22714.1|D22714 RICC1008A Rice callus Oryza sativa (japo... 54 1e-004
gb|AU029446.1|AU029446 AU029446 Rice panicle shorter than 3... 54 1e-004
gb|AACV01003130.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 52 5e-004
dbj|AP003627.3| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|C98349.1|C98349 C98349 Rice callus Oryza sativa (japonic... 50 0.002
emb|AL713952.3|CNS07YPX Oryza sativa chromosome 12, . BAC O... 44 0.13
ref|NT_107160.1| Oryza sativa (japonica cultivar-group) 44 0.13
>dbj|AK067406.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099N23, full
insert sequence
Length = 1097
Score = 486 bits (245), Expect = e-134
Identities = 323/349 (92%)
Strand = Plus / Plus
Query: 120 cgcggcgggggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccag 179
|||||||| ||||| || |||||||||||||| || |||||||| |||||||| ||||||
Sbjct: 120 cgcggcggcggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccag 179
Query: 180 ttccccgtaggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggc 239
|||||||| |||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 180 ttccccgtcggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggc 239
Query: 240 accggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgag 299
||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||
Sbjct: 240 accggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtgctcgag 299
Query: 300 ttggcggggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactg 359
| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 300 cttgcggggaacgcggcgcgggacaacaagaagaaccggatcatcccgcggcacgtgctg 359
Query: 360 ctggcgatccgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacac 419
||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 360 ctggcgatccgcaacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcac 419
Query: 420 ggcggggttctgcccaacatcaaccctgtgctgctccccaagaaaaccg 468
|||||||| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 420 ggcggggtgctgcccaacatcaacccggtgctgctccccaagaagaccg 468
>ref|XM_475374.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 492
Score = 486 bits (245), Expect = e-134
Identities = 323/349 (92%)
Strand = Plus / Plus
Query: 120 cgcggcgggggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccag 179
|||||||| ||||| || |||||||||||||| || |||||||| |||||||| ||||||
Sbjct: 49 cgcggcggcggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccag 108
Query: 180 ttccccgtaggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggc 239
|||||||| |||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 109 ttccccgtcggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggc 168
Query: 240 accggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgag 299
||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||
Sbjct: 169 accggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtgctcgag 228
Query: 300 ttggcggggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactg 359
| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 229 cttgcggggaacgcggcgcgggacaacaagaagaaccggatcatcccgcggcacgtgctg 288
Query: 360 ctggcgatccgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacac 419
||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 289 ctggcgatccgcaacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcac 348
Query: 420 ggcggggttctgcccaacatcaaccctgtgctgctccccaagaaaaccg 468
|||||||| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 349 ggcggggtgctgcccaacatcaacccggtgctgctccccaagaagaccg 397
>dbj|AK099763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094K03, full
insert sequence
Length = 912
Score = 478 bits (241), Expect = e-132
Identities = 322/349 (92%)
Strand = Plus / Plus
Query: 120 cgcggcgggggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccag 179
|||||||| ||||| || |||||||||||||| || | |||||| |||||||| ||||||
Sbjct: 119 cgcggcggcggcgggccgaagaagaagccggtgtccccctccgtcaaggccgggctccag 178
Query: 180 ttccccgtaggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggc 239
|||||||| |||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 179 ttccccgtcggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggc 238
Query: 240 accggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgag 299
||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||
Sbjct: 239 accggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgaggtgctcgag 298
Query: 300 ttggcggggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactg 359
| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 299 cttgcggggaacgcggcgcgggacaacaagaagaaccggatcatcccgcggcacgtgctg 358
Query: 360 ctggcgatccgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacac 419
||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 359 ctggcgatccgcaacgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcac 418
Query: 420 ggcggggttctgcccaacatcaaccctgtgctgctccccaagaaaaccg 468
|||||||| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 419 ggcggggtgctgcccaacatcaacccggtgctgctccccaagaagaccg 467
>dbj|AK074018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075N03, full
insert sequence
Length = 797
Score = 400 bits (202), Expect = e-109
Identities = 307/342 (89%)
Strand = Plus / Plus
Query: 128 gggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgt 187
|||||| || |||||||||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 131 gggcgggccgaagaagaagccggtgtcgcgctccgtcaaggccgggctccagttccccgt 190
Query: 188 aggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgc 247
||||| |||||||||||||||||| |||| |||||| ||||||| ||||||||||||||
Sbjct: 191 cggccgcatcggccgctacctcaagaagggccgctacgcccagcgcgtcggcaccggcgc 250
Query: 248 ccccgtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggg 307
||||||||||||||| ||||||||||||||||||||||| ||| | || ||| | || ||
Sbjct: 251 ccccgtctacctcgccgccgtcctcgagtacctcgccgcagaggtgctggagctcgccgg 310
Query: 308 gaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgat 367
|||||| ||||||||||||||||||||||||||||||||| | ||||| |||||||||||
Sbjct: 311 gaacgcggcgcgggacaacaagaagaaccggatcatcccgaggcacgtgctgctggcgat 370
Query: 368 ccgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggggt 427
||||||||| ||||||||||||||||| || ||||| ||||||||||| |||||||| ||
Sbjct: 371 ccgcaacgacgaggagctcgggaagctgctcgccggggtcaccatcgcgcacggcggcgt 430
Query: 428 tctgcccaacatcaaccctgtgctgctccccaagaaaaccgc 469
||||| ||||||||||| ||||||||||| ||||| |||||
Sbjct: 431 gctgccgaacatcaacccggtgctgctcccgaagaagaccgc 472
>gb|AU065597.1|AU065597 AU065597 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E50453_1A, mRNA sequence
Length = 729
Score = 349 bits (176), Expect = 2e-093
Identities = 287/324 (88%)
Strand = Plus / Plus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || |||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 154 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 213
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
||||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||
Sbjct: 214 ccgctacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccgtctacct 273
Query: 260 cgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcg 319
||| |||||||||||||||||||| |||||| | || ||| | || |||||||| || |
Sbjct: 274 cgccgccgtcctcgagtacctcgctgccgaggtgctggagctcgccgggaacgcggccag 333
Query: 320 ggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgatga 379
|||||||||||||||| ||||||||||||| ||||| |||||||||||| | ||||| ||
Sbjct: 334 ggacaacaagaagaacaggatcatcccgcgccacgtgctgctggcgatcaggaacgacga 393
Query: 380 ggagctcgggaagctactggccggcgtcaccatcgcacacggcggggttctgcccaacat 439
||||||||| ||||| ||||||||||| |||||||| ||||| || || |||||||||||
Sbjct: 394 ggagctcggcaagctgctggccggcgtgaccatcgcgcacggaggcgtgctgcccaacat 453
Query: 440 caaccctgtgctgctccccaagaa 463
|||||| |||||||| ||||||||
Sbjct: 454 caacccggtgctgctgcccaagaa 477
>gb|CV725138.1|CV725138 14Salt--02-B03.g1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--02-B03, mRNA sequence
Length = 491
Score = 349 bits (176), Expect = 2e-093
Identities = 287/324 (88%)
Strand = Plus / Plus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || |||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 165 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 224
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
||||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||
Sbjct: 225 ccgctacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccgtctacct 284
Query: 260 cgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcg 319
||| |||||||||||||||||||| |||||| | || ||| | || |||||||| || |
Sbjct: 285 cgccgccgtcctcgagtacctcgctgccgaggtgctggagctcgccgggaacgcggccag 344
Query: 320 ggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgatga 379
|||||||||||||||| ||||||||||||| ||||| |||||||||||| | ||||| ||
Sbjct: 345 ggacaacaagaagaacaggatcatcccgcgccacgtgctgctggcgatcaggaacgacga 404
Query: 380 ggagctcgggaagctactggccggcgtcaccatcgcacacggcggggttctgcccaacat 439
||||||||| ||||| ||||||||||| |||||||| ||||| || || |||||||||||
Sbjct: 405 ggagctcggcaagctgctggccggcgtgaccatcgcgcacggaggcgtgctgcccaacat 464
Query: 440 caaccctgtgctgctccccaagaa 463
|||||| |||||||| ||||||||
Sbjct: 465 caacccggtgctgctgcccaagaa 488
>dbj|AK121750.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087I02, full
insert sequence
Length = 754
Score = 349 bits (176), Expect = 2e-093
Identities = 287/324 (88%)
Strand = Plus / Plus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || |||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 165 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 224
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
||||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||
Sbjct: 225 ccgctacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccgtctacct 284
Query: 260 cgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcg 319
||| |||||||||||||||||||| |||||| | || ||| | || |||||||| || |
Sbjct: 285 cgccgccgtcctcgagtacctcgctgccgaggtgctggagctcgccgggaacgcggccag 344
Query: 320 ggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgatga 379
|||||||||||||||| ||||||||||||| ||||| |||||||||||| | ||||| ||
Sbjct: 345 ggacaacaagaagaacaggatcatcccgcgccacgtgctgctggcgatcaggaacgacga 404
Query: 380 ggagctcgggaagctactggccggcgtcaccatcgcacacggcggggttctgcccaacat 439
||||||||| ||||| ||||||||||| |||||||| ||||| || || |||||||||||
Sbjct: 405 ggagctcggcaagctgctggccggcgtgaccatcgcgcacggaggcgtgctgcccaacat 464
Query: 440 caaccctgtgctgctccccaagaa 463
|||||| |||||||| ||||||||
Sbjct: 465 caacccggtgctgctgcccaagaa 488
>ref|NM_193707.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 480
Score = 349 bits (176), Expect = 2e-093
Identities = 287/324 (88%)
Strand = Plus / Plus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || |||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 75 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 134
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
||||||||||||| |||| |||||| | ||||| |||||||||||||||||||||||||
Sbjct: 135 ccgctacctcaagaagggccgctacgcgcagcgcatcggcaccggcgcccccgtctacct 194
Query: 260 cgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcg 319
||| ||||||||||||||||||||||||||| | || ||| | || |||||||| || |
Sbjct: 195 cgccgccgtcctcgagtacctcgccgccgaggtgctggagctcgccgggaacgcggccag 254
Query: 320 ggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgatga 379
|||||||||||||||| ||||||||||||| ||||| |||||||||||| | ||||| ||
Sbjct: 255 ggacaacaagaagaacaggatcatcccgcgccacgtgctgctggcgatcaggaacgacga 314
Query: 380 ggagctcgggaagctactggccggcgtcaccatcgcacacggcggggttctgcccaacat 439
||||||||| ||||| ||||||||||| |||||||| ||||| || || |||||||||||
Sbjct: 315 ggagctcggcaagctgctggccggcgtgaccatcgcgcacggaggcgtgctgcccaacat 374
Query: 440 caaccctgtgctgctccccaagaa 463
|||||| |||||||| ||||||||
Sbjct: 375 caacccggtgctgctgcccaagaa 398
>gb|AU058259.1|AU058259 AU058259 Oryza sativa Nipponbare immature leaf including apical
meristem (under long day condition) Oryza sativa
(japonica cultivar-group) cDNA clone E50282_1A, mRNA
sequence
Length = 593
Score = 333 bits (168), Expect = 1e-088
Identities = 285/324 (87%)
Strand = Plus / Plus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || |||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 133 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 192
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
||||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||
Sbjct: 193 ccgctacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccgtctacct 252
Query: 260 cgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcg 319
||| |||||||||||||||||||| |||||| | || ||| | || |||||||| || |
Sbjct: 253 cgccgccgtcctcgagtacctcgctgccgaggtgctggagctcgccgggaacgcggccag 312
Query: 320 ggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgatga 379
|||||||||||||||| ||||||||||||| ||||| |||||||||||| | ||||| ||
Sbjct: 313 ggacaacaagaagaacaggatcatcccgcgccacgtgctgctggcgatcaggaacgacga 372
Query: 380 ggagctcgggaagctactggccggcgtcaccatcgcacacggcggggttctgcccaacat 439
||||||||| ||||| ||||||||||| |||| | |||||| || || |||||||||||
Sbjct: 373 ggagctcggcaagctgctggccggcgtgaccaaagaacacggaggcgtgctgcccaacat 432
Query: 440 caaccctgtgctgctccccaagaa 463
|||||| |||||||| ||||||||
Sbjct: 433 caacccggtgctgctgcccaagaa 456
>gb|AU183330.1|AU183330 AU183330 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61713, mRNA sequence
Length = 446
Score = 333 bits (168), Expect = 1e-088
Identities = 276/312 (88%)
Strand = Plus / Plus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || |||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 135 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 194
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
||||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||
Sbjct: 195 ccgctacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccgtctacct 254
Query: 260 cgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcg 319
||| |||||||||||||||||||| |||||| | || ||| | || |||||||| || |
Sbjct: 255 cgccgccgtcctcgagtacctcgctgccgaggtgctggagctcgccgggaacgcggccag 314
Query: 320 ggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgatga 379
|||||||||||||||| ||||||||||||| ||||| |||||||||||| | ||||| ||
Sbjct: 315 ggacaacaagaagaacaggatcatcccgcgccacgtgctgctggcgatcaggaacgacga 374
Query: 380 ggagctcgggaagctactggccggcgtcaccatcgcacacggcggggttctgcccaacat 439
||||||||| ||||| ||||||||||| |||||||| ||||| || || |||||||||||
Sbjct: 375 ggagctcggcaagctgctggccggcgtgaccatcgcgcacggaggcgtgctgcccaacat 434
Query: 440 caaccctgtgct 451
|||||| |||||
Sbjct: 435 caacccggtgct 446
>gb|AU094183.1|AU094183 AU094183 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3565, mRNA sequence
Length = 631
Score = 329 bits (166), Expect = 1e-087
Identities = 285/324 (87%), Gaps = 1/324 (0%)
Strand = Plus / Plus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || || ||||| |||||||| ||||||||||||| |||||||||||
Sbjct: 25 gaagaagncggtgtcgcgntccgtcaaggccggg-tccagttccccgtcggccgtatcgg 83
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
||||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||
Sbjct: 84 ccgctacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccgtctacct 143
Query: 260 cgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcg 319
||| |||||||||||||||||||| |||||| | || ||| | || |||||||| || |
Sbjct: 144 cgccgccgtcctcgagtacctcgctgccgaggtgctggagctcgccgggaacgcggccag 203
Query: 320 ggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgatga 379
|||||||||||||||| ||||||||||||| ||||| |||||||||||| | ||||| ||
Sbjct: 204 ggacaacaagaagaacaggatcatcccgcgccacgtgctgctggcgatcaggaacgacga 263
Query: 380 ggagctcgggaagctactggccggcgtcaccatcgcacacggcggggttctgcccaacat 439
||||||||| ||||| ||||||||||| |||||||| ||||| || || |||||||||||
Sbjct: 264 ggagctcggcaagctgctggccggcgtgaccatcgcgcacggaggcgtgctgcccaacat 323
Query: 440 caaccctgtgctgctccccaagaa 463
|||||| |||||||| ||||||||
Sbjct: 324 caacccggtgctgctgcccaagaa 347
>gb|AU173102.1|AU173102 AU173102 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0711, mRNA sequence
Length = 448
Score = 327 bits (165), Expect = 6e-087
Identities = 270/305 (88%)
Strand = Plus / Plus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || |||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 144 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 203
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
||||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||
Sbjct: 204 ccgctacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccgtctacct 263
Query: 260 cgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcg 319
||| |||||||||||||||||||| |||||| | || ||| | || |||||||| || |
Sbjct: 264 cgccgccgtcctcgagtacctcgctgccgaggtgctggagctcgccgggaacgcggccag 323
Query: 320 ggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgatga 379
|||||||||||||||| ||||||||||||| ||||| |||||||||||| | ||||| ||
Sbjct: 324 ggacaacaagaagaacaggatcatcccgcgccacgtgctgctggcgatcaggaacgacga 383
Query: 380 ggagctcgggaagctactggccggcgtcaccatcgcacacggcggggttctgcccaacat 439
||||||||| ||||| ||||||||||| |||||||| ||||| || || |||||||||||
Sbjct: 384 ggagctcggcaagctgctggccggcgtgaccatcgcgcacggaggcgtgctgcccaacat 443
Query: 440 caacc 444
|||||
Sbjct: 444 caacc 448
>gb|AU029353.1|AU029353 AU029353 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30213_8Z, mRNA sequence
Length = 686
Score = 313 bits (158), Expect = 9e-083
Identities = 285/325 (87%), Gaps = 2/325 (0%)
Strand = Plus / Plus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctcc-agttccccgtaggccgtatcg 198
||||||| |||| || |||||||| |||||||| |||| |||||||||| ||||||||||
Sbjct: 149 gaagaaggcggtgtcgcgctccgtcaaggccgggctcccagttccccgtcggccgtatcg 208
Query: 199 gccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacc 258
|||||||||||||| |||| | ||| ||||||| ||||||||||||||||||||||||
Sbjct: 209 gccgctacctcaagaagggccn-tacgcccagcgcatcggcaccggcgcccccgtctacc 267
Query: 259 tcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgc 318
|||| |||||||||||||||||||| |||||| | || ||| | || |||||||| ||
Sbjct: 268 tcgccgccgtcctcgagtacctcgctgccgaggtgctggagctcgccgggaacgcggcca 327
Query: 319 gggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgatg 378
||||||||||||||||| ||||||||||||| ||||| |||||||||||| | ||||| |
Sbjct: 328 gggacaacaagaagaacaggatcatcccgcgccacgtgctgctggcgatcaggaacgacg 387
Query: 379 aggagctcgggaagctactggccggcgtcaccatcgcacacggcggggttctgcccaaca 438
|||||||||| ||||| ||||||||||| |||||||| ||||| || || ||||||||||
Sbjct: 388 aggagctcggcaagctgctggccggcgtgaccatcgcgcacggaggcgtgctgcccaaca 447
Query: 439 tcaaccctgtgctgctccccaagaa 463
||||||| |||||||| ||||||||
Sbjct: 448 tcaacccggtgctgctgcccaagaa 472
>gb|AU065295.1|AU065295 AU065295 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E61204_3A, mRNA sequence
Length = 457
Score = 313 bits (158), Expect = 9e-083
Identities = 285/325 (87%), Gaps = 2/325 (0%)
Strand = Plus / Plus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || |||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 132 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 191
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
| ||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||
Sbjct: 192 c-gctacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccgtctacct 250
Query: 260 cgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcg 319
||| |||||||||||||||||||| |||||| | || ||| | || |||||||| || |
Sbjct: 251 cgccgccgtcctcgagtacctcgctgccgaggtgctggagctcgccgggaacgcggccag 310
Query: 320 ggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgatga 379
|||||||||||||||| ||||||||||||| ||||| |||||||||||| | ||||| ||
Sbjct: 311 ggacaacaagaagaacaggatcatcccgcgccacgtgctgctggcgatcaggaacgacga 370
Query: 380 ggagctcgggaagctactggccggcgt-caccatcgcacacggcggggttctgcccaaca 438
||||||||| ||||| ||||||||||| ||||||| ||||| || || ||||||||||
Sbjct: 371 ggagctcggcaagctgctggccggcgtggaccatcgngcacggaggcgtgctgcccaaca 430
Query: 439 tcaaccctgtgctgctccccaagaa 463
||||||| |||||||| ||||||||
Sbjct: 431 tcaacccggtgctgctgcccaagaa 455
>gb|C74363.1|C74363 C74363 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30960_1A, mRNA sequence
Length = 275
Score = 309 bits (156), Expect = 1e-081
Identities = 200/215 (93%)
Strand = Plus / Plus
Query: 254 ctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgc 313
||||||||| ||||||||||||||||||||||||||| | |||||| | |||||||||||
Sbjct: 5 ctacctcgccgccgtcctcgagtacctcgccgccgaggtgctcgagcttgcggggaacgc 64
Query: 314 agcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaa 373
||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||
Sbjct: 65 ggcgcgggacaacaagaagaaccggatcatcccgcggcacgtgctgctggcgatccgnaa 124
Query: 374 cgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggggttctgcc 433
||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||
Sbjct: 125 cgacgaggagctcgggaagctgctggccggcgtcaccatcgcgcacggcggggtgctgcc 184
Query: 434 caacatcaaccctgtgctgctccccaagaaaaccg 468
|||||||||||| ||||||||||||||||| ||||
Sbjct: 185 caacatcaacccggtgctgctccccaagaagaccg 219
>gb|AU029320.1|AU029320 AU029320 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30154_6Z, mRNA sequence
Length = 656
Score = 307 bits (155), Expect = 5e-081
Identities = 271/309 (87%), Gaps = 2/309 (0%)
Strand = Plus / Plus
Query: 156 cgctccgtgaaggccggcctccagttccccgtaggccgtatcggccgctacctcaagcag 215
|||||||| |||||||| ||||| |||||||| |||| ||||||||||||||||||| ||
Sbjct: 26 cgctccgtnaaggccgggctccatttccccgtcggccntatcggccgctacctcaagaag 85
Query: 216 ggtcgctactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgt-cctcga 274
|| || ||| ||||||| |||||||||||||||||||||||| || | ||||| ||||||
Sbjct: 86 ggccg-tacgcccagcgcgtcggcaccggcgcccccgtctacntcnccgccgttcctcga 144
Query: 275 gtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaa 334
||||||||||| ||| | | ||| | || |||||||| ||||||||||| ||||||||
Sbjct: 145 ttacctcgccgcagaggtgntggagctcgccgggaacgcggcgcgggacaanaagaagaa 204
Query: 335 ccggatcatcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagct 394
||||||||||||| | ||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 205 ccggatcatcccgaggcacgtgctgctggcgatccgcaacgacgaggagctcgggaagct 264
Query: 395 actggccggcgtcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgct 454
|| ||||| ||||||||||| |||||||| || ||||| ||||||||||| ||||||||
Sbjct: 265 gctcgccggggtcaccatcgcgcacggcggcgtgctgccgaacatcaacccggtgctgct 324
Query: 455 ccccaagaa 463
||| |||||
Sbjct: 325 cccgaagaa 333
>gb|D23029.1|D23029 RICC2067A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2067_1A, mRNA sequence
Length = 362
Score = 272 bits (137), Expect = 3e-070
Identities = 221/248 (89%), Gaps = 1/248 (0%)
Strand = Plus / Plus
Query: 128 gggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgt 187
|||||| || |||||||||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 113 gggcgggccgaagaagaagccggtgtcgcgctccgtcaaggccgggctccagttccccgt 172
Query: 188 aggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgc 247
||||| ||||||| ||||||||| |||| |||||| ||||||| ||||||||||||||
Sbjct: 173 cggccgcatcggccn-tacctcaagaagggccgctacgcccagcgcgtcggcaccggcgc 231
Query: 248 ccccgtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggg 307
||||||||||||||| ||||||||||||||||||||||| ||| | || ||| | || ||
Sbjct: 232 ccccgtctacctcgccgccgtcctcgagtacctcgccgcagaggtgctggagctcgccgg 291
Query: 308 gaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgat 367
|||||| ||||||||||||||||||||||||||||||||| | ||||| |||||||||||
Sbjct: 292 gaacgcggcgcgggacaacaagaagaaccggatcatcccgaggcacgtgctgctggcgat 351
Query: 368 ccgcaacg 375
|||||||
Sbjct: 352 tcgcaacg 359
>gb|AU095387.1|AU095387 AU095387 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61682, mRNA sequence
Length = 567
Score = 270 bits (136), Expect = 1e-069
Identities = 262/300 (87%), Gaps = 3/300 (1%)
Strand = Plus / Plus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || |||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 125 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 184
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
| ||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||
Sbjct: 185 c-gctacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccgtctacct 243
Query: 260 cgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcg 319
||| |||||||||||||||||||| |||||| | || ||| | || |||||||| || |
Sbjct: 244 cgccgccgtcctcgagtacctcgctgccgaggtgctggagctcgccgggaacgcggccag 303
Query: 320 ggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgatga 379
|||||||||||||||| ||||||||||||| ||||| |||||||||||| | ||||| ||
Sbjct: 304 ggacaacaagaagaacaggatcatcccgcgccacgtgctgctggcgatcaggaacgacga 363
Query: 380 ggagctcgggaagctactggccggcgtcaccatcgcacacggcggggttctgcccaacat 439
||| ||||| ||||| |||||||||| |||||||| ||||| || || |||||||||||
Sbjct: 364 gga-ctcggcaagct-gtggccggcgtgaccatcgcgcacggaggcgtgctgcccaacat 421
>gb|AU165979.1|AU165979 AU165979 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30416, mRNA sequence
Length = 535
Score = 260 bits (131), Expect = 1e-066
Identities = 224/255 (87%)
Strand = Plus / Plus
Query: 209 caagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacctcgctgccgt 268
|||| |||| |||||| ||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 1 caagaagggccgctacgcccagcgcatcggcaccggcgcccccgtctacctcgccgccgt 60
Query: 269 cctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcgggacaacaa 328
||||||||||||||| |||||| | || ||| | || |||||||| || ||||||||||
Sbjct: 61 cctcgagtacctcgctgccgaggtgctggagctcgccgggaacgcggccagggacaacaa 120
Query: 329 gaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgatgaggagctcgg 388
||||||| ||||||||||||| ||||| |||||||||||| | ||||| |||||||||||
Sbjct: 121 gaagaacaggatcatcccgcgccacgtgctgctggcgatcaggaacgacgaggagctcgg 180
Query: 389 gaagctactggccggcgtcaccatcgcacacggcggggttctgcccaacatcaaccctgt 448
||||| ||||||||||| |||||||| ||||| || || ||||||||||||||||| ||
Sbjct: 181 caagctgctggccggcgtgaccatcgcgcacggaggcgtgctgcccaacatcaacccggt 240
Query: 449 gctgctccccaagaa 463
|||||| ||||||||
Sbjct: 241 gctgctgcccaagaa 255
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05,
complete sequence
Length = 163130
Score = 260 bits (131), Expect = 1e-066
Identities = 164/175 (93%)
Strand = Plus / Minus
Query: 294 ctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacac 353
|||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 101904 ctcgagcttgcggggaacgcggcgcgggacaacaagaagaaccggatcatcccgcggcac 101845
Query: 354 gtactgctggcgatccgcaacgatgaggagctcgggaagctactggccggcgtcaccatc 413
|| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 101844 gtgctgctggcgatccgcaacgacgaggagctcgggaagctgctggccggcgtcaccatc 101785
Query: 414 gcacacggcggggttctgcccaacatcaaccctgtgctgctccccaagaaaaccg 468
|| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 101784 gcgcacggcggggtgctgcccaacatcaacccggtgctgctccccaagaagaccg 101730
Score = 236 bits (119), Expect = 2e-059
Identities = 158/171 (92%)
Strand = Plus / Minus
Query: 120 cgcggcgggggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccag 179
|||||||| ||||| || |||||||||||||| || |||||||| |||||||| ||||||
Sbjct: 102154 cgcggcggcggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccag 102095
Query: 180 ttccccgtaggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggc 239
|||||||| |||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 102094 ttccccgtcggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggc 102035
Query: 240 accggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccgag 290
||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 102034 accggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgag 101984
>gb|AC108876.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1525_A02,
complete sequence
Length = 93826
Score = 260 bits (131), Expect = 1e-066
Identities = 164/175 (93%)
Strand = Plus / Minus
Query: 294 ctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacac 353
|||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 7547 ctcgagcttgcggggaacgcggcgcgggacaacaagaagaaccggatcatcccgcggcac 7488
Query: 354 gtactgctggcgatccgcaacgatgaggagctcgggaagctactggccggcgtcaccatc 413
|| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 7487 gtgctgctggcgatccgcaacgacgaggagctcgggaagctgctggccggcgtcaccatc 7428
Query: 414 gcacacggcggggttctgcccaacatcaaccctgtgctgctccccaagaaaaccg 468
|| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 7427 gcgcacggcggggtgctgcccaacatcaacccggtgctgctccccaagaagaccg 7373
Score = 236 bits (119), Expect = 2e-059
Identities = 158/171 (92%)
Strand = Plus / Minus
Query: 120 cgcggcgggggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccag 179
|||||||| ||||| || |||||||||||||| || |||||||| |||||||| ||||||
Sbjct: 7797 cgcggcggcggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccag 7738
Query: 180 ttccccgtaggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggc 239
|||||||| |||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 7737 ttccccgtcggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggc 7678
Query: 240 accggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccgag 290
||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 7677 accggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgag 7627
>gb|AACV01012352.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012352, whole
genome shotgun sequence
Length = 16496
Score = 260 bits (131), Expect = 1e-066
Identities = 164/175 (93%)
Strand = Plus / Minus
Query: 294 ctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacac 353
|||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 8551 ctcgagcttgcggggaacgcggcgcgggacaacaagaagaaccggatcatcccgcggcac 8492
Query: 354 gtactgctggcgatccgcaacgatgaggagctcgggaagctactggccggcgtcaccatc 413
|| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 8491 gtgctgctggcgatccgcaacgacgaggagctcgggaagctgctggccggcgtcaccatc 8432
Query: 414 gcacacggcggggttctgcccaacatcaaccctgtgctgctccccaagaaaaccg 468
|| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 8431 gcgcacggcggggtgctgcccaacatcaacccggtgctgctccccaagaagaccg 8377
Score = 236 bits (119), Expect = 2e-059
Identities = 158/171 (92%)
Strand = Plus / Minus
Query: 120 cgcggcgggggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccag 179
|||||||| ||||| || |||||||||||||| || |||||||| |||||||| ||||||
Sbjct: 8801 cgcggcggcggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccag 8742
Query: 180 ttccccgtaggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggc 239
|||||||| |||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 8741 ttccccgtcggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggc 8682
Query: 240 accggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccgag 290
||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 8681 accggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgag 8631
>ref|NT_107213.1| Oryza sativa (japonica cultivar-group)
Length = 2036819
Score = 260 bits (131), Expect = 1e-066
Identities = 164/175 (93%)
Strand = Plus / Minus
Query: 294 ctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacac 353
|||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 1066353 ctcgagcttgcggggaacgcggcgcgggacaacaagaagaaccggatcatcccgcggcac 1066294
Query: 354 gtactgctggcgatccgcaacgatgaggagctcgggaagctactggccggcgtcaccatc 413
|| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 1066293 gtgctgctggcgatccgcaacgacgaggagctcgggaagctgctggccggcgtcaccatc 1066234
Query: 414 gcacacggcggggttctgcccaacatcaaccctgtgctgctccccaagaaaaccg 468
|| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 1066233 gcgcacggcggggtgctgcccaacatcaacccggtgctgctccccaagaagaccg 1066179
Score = 236 bits (119), Expect = 2e-059
Identities = 158/171 (92%)
Strand = Plus / Minus
Query: 120 cgcggcgggggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccag 179
|||||||| ||||| || |||||||||||||| || |||||||| |||||||| ||||||
Sbjct: 1066603 cgcggcggcggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccag 1066544
Query: 180 ttccccgtaggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggc 239
|||||||| |||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 1066543 ttccccgtcggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggc 1066484
Query: 240 accggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccgag 290
||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1066483 accggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgag 1066433
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 260 bits (131), Expect = 1e-066
Identities = 164/175 (93%)
Strand = Plus / Minus
Query: 294 ctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacac 353
|||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 4892886 ctcgagcttgcggggaacgcggcgcgggacaacaagaagaaccggatcatcccgcggcac 4892827
Query: 354 gtactgctggcgatccgcaacgatgaggagctcgggaagctactggccggcgtcaccatc 413
|| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 4892826 gtgctgctggcgatccgcaacgacgaggagctcgggaagctgctggccggcgtcaccatc 4892767
Query: 414 gcacacggcggggttctgcccaacatcaaccctgtgctgctccccaagaaaaccg 468
|| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 4892766 gcgcacggcggggtgctgcccaacatcaacccggtgctgctccccaagaagaccg 4892712
Score = 236 bits (119), Expect = 2e-059
Identities = 158/171 (92%)
Strand = Plus / Minus
Query: 120 cgcggcgggggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccag 179
|||||||| ||||| || |||||||||||||| || |||||||| |||||||| ||||||
Sbjct: 4893136 cgcggcggcggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccag 4893077
Query: 180 ttccccgtaggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggc 239
|||||||| |||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 4893076 ttccccgtcggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggc 4893017
Query: 240 accggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccgag 290
||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4893016 accggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgag 4892966
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 260 bits (131), Expect = 1e-066
Identities = 164/175 (93%)
Strand = Plus / Minus
Query: 294 ctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacac 353
|||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 22193199 ctcgagcttgcggggaacgcggcgcgggacaacaagaagaaccggatcatcccgcggcac 22193140
Query: 354 gtactgctggcgatccgcaacgatgaggagctcgggaagctactggccggcgtcaccatc 413
|| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 22193139 gtgctgctggcgatccgcaacgacgaggagctcgggaagctgctggccggcgtcaccatc 22193080
Query: 414 gcacacggcggggttctgcccaacatcaaccctgtgctgctccccaagaaaaccg 468
|| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 22193079 gcgcacggcggggtgctgcccaacatcaacccggtgctgctccccaagaagaccg 22193025
Score = 236 bits (119), Expect = 2e-059
Identities = 158/171 (92%)
Strand = Plus / Minus
Query: 120 cgcggcgggggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccag 179
|||||||| ||||| || |||||||||||||| || |||||||| |||||||| ||||||
Sbjct: 22193449 cgcggcggcggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccag 22193390
Query: 180 ttccccgtaggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggc 239
|||||||| |||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 22193389 ttccccgtcggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggc 22193330
Query: 240 accggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccgag 290
||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 22193329 accggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgag 22193279
Score = 212 bits (107), Expect = 2e-052
Identities = 146/159 (91%)
Strand = Plus / Plus
Query: 128 gggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgt 187
|||||| || |||||||||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 700504 gggcgggccgaagaagaagccggtgtcgcgctccgtcaaggccgggctccagttccccgt 700563
Query: 188 aggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgc 247
||||| |||||||||||||||||| |||| |||||| ||||||| ||||||||||||||
Sbjct: 700564 cggccgcatcggccgctacctcaagaagggccgctacgcccagcgcgtcggcaccggcgc 700623
Query: 248 ccccgtctacctcgctgccgtcctcgagtacctcgccgc 286
||||||||||||||| |||||||||||||||||||||||
Sbjct: 700624 ccccgtctacctcgccgccgtcctcgagtacctcgccgc 700662
Score = 206 bits (104), Expect = 1e-050
Identities = 149/164 (90%)
Strand = Plus / Plus
Query: 306 gggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcg 365
|||||||| ||||||||||||||||||||||||||||||||| | ||||| |||||||||
Sbjct: 700761 gggaacgcggcgcgggacaacaagaagaaccggatcatcccgaggcacgtgctgctggcg 700820
Query: 366 atccgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggg 425
||||||||||| ||||||||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 700821 atccgcaacgacgaggagctcgggaagctgctcgccggggtcaccatcgcgcacggcggc 700880
Query: 426 gttctgcccaacatcaaccctgtgctgctccccaagaaaaccgc 469
|| ||||| ||||||||||| ||||||||||| ||||| |||||
Sbjct: 700881 gtgctgccgaacatcaacccggtgctgctcccgaagaagaccgc 700924
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 260 bits (131), Expect = 1e-066
Identities = 164/175 (93%)
Strand = Plus / Minus
Query: 294 ctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacac 353
|||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 22512497 ctcgagcttgcggggaacgcggcgcgggacaacaagaagaaccggatcatcccgcggcac 22512438
Query: 354 gtactgctggcgatccgcaacgatgaggagctcgggaagctactggccggcgtcaccatc 413
|| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 22512437 gtgctgctggcgatccgcaacgacgaggagctcgggaagctgctggccggcgtcaccatc 22512378
Query: 414 gcacacggcggggttctgcccaacatcaaccctgtgctgctccccaagaaaaccg 468
|| ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 22512377 gcgcacggcggggtgctgcccaacatcaacccggtgctgctccccaagaagaccg 22512323
Score = 236 bits (119), Expect = 2e-059
Identities = 158/171 (92%)
Strand = Plus / Minus
Query: 120 cgcggcgggggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccag 179
|||||||| ||||| || |||||||||||||| || |||||||| |||||||| ||||||
Sbjct: 22512747 cgcggcggcggcgggccgaagaagaagccggtgtcccgctccgtcaaggccgggctccag 22512688
Query: 180 ttccccgtaggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggc 239
|||||||| |||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 22512687 ttccccgtcggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggc 22512628
Query: 240 accggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccgag 290
||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 22512627 accggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgccgag 22512577
Score = 212 bits (107), Expect = 2e-052
Identities = 146/159 (91%)
Strand = Plus / Plus
Query: 128 gggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgt 187
|||||| || |||||||||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 706989 gggcgggccgaagaagaagccggtgtcgcgctccgtcaaggccgggctccagttccccgt 707048
Query: 188 aggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgc 247
||||| |||||||||||||||||| |||| |||||| ||||||| ||||||||||||||
Sbjct: 707049 cggccgcatcggccgctacctcaagaagggccgctacgcccagcgcgtcggcaccggcgc 707108
Query: 248 ccccgtctacctcgctgccgtcctcgagtacctcgccgc 286
||||||||||||||| |||||||||||||||||||||||
Sbjct: 707109 ccccgtctacctcgccgccgtcctcgagtacctcgccgc 707147
Score = 206 bits (104), Expect = 1e-050
Identities = 149/164 (90%)
Strand = Plus / Plus
Query: 306 gggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcg 365
|||||||| ||||||||||||||||||||||||||||||||| | ||||| |||||||||
Sbjct: 707246 gggaacgcggcgcgggacaacaagaagaaccggatcatcccgaggcacgtgctgctggcg 707305
Query: 366 atccgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggg 425
||||||||||| ||||||||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 707306 atccgcaacgacgaggagctcgggaagctgctcgccggggtcaccatcgcgcacggcggc 707365
Query: 426 gttctgcccaacatcaaccctgtgctgctccccaagaaaaccgc 469
|| ||||| ||||||||||| ||||||||||| ||||| |||||
Sbjct: 707366 gtgctgccgaacatcaacccggtgctgctcccgaagaagaccgc 707409
>gb|C74013.1|C74013 C74013 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30154_1A, mRNA sequence
Length = 372
Score = 246 bits (124), Expect = 2e-062
Identities = 223/251 (88%), Gaps = 4/251 (1%)
Strand = Plus / Plus
Query: 128 gggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgt 187
|||||| || |||||||||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 119 gggcgggccgaagaagaagccggtgtcgcgctccgtcaaggccgggctccagttccccgt 178
Query: 188 aggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgc 247
||||| |||||| ||||||||||| |||| |||||| ||||||| ||||||||||||||
Sbjct: 179 cggccgcatcggc-gctacctcaagaagggccgctacgcccagcgcgtcggcaccggcgc 237
Query: 248 ccccgtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggg 307
||||||||||||||| ||||||||||||||||||||||| ||| | || ||| | || ||
Sbjct: 238 ccccgtctacctcgccgccgtcctcgagtacctcgccgcagaggtgctggag-tcgccgg 296
Query: 308 gaacgcagcgc-gggacaacaagaagaaccggatcatcccgcgacacgtactgc-tggcg 365
|||||| |||| ||||||||||||||||||||||||||||| | ||||| || | |||||
Sbjct: 297 gaacgcggcgcggggacaacaagaagaaccggatcatcccgaggcacgtgctncttggcg 356
Query: 366 atccgcaacga 376
|||||||||||
Sbjct: 357 atccgcaacga 367
>gb|AU092780.1|AU092780 AU092780 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C53552, mRNA sequence
Length = 503
Score = 244 bits (123), Expect = 7e-062
Identities = 209/238 (87%)
Strand = Plus / Plus
Query: 226 cccagcgtgtcggcaccggcgcccccgtctacctcgctgccgtcctcgagtacctcgccg 285
||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| |
Sbjct: 5 cccagcgcatcggcaccggcgcccccgtctacctcgccgccgtcctcgagtacntcgctg 64
Query: 286 ccgagctcctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatcatcc 345
||||| | || ||| | || |||||||| || ||||||||||||||||| |||||||||
Sbjct: 65 ccgaggtgctggagctcgccgggaacgcggccagggacaacaagaagaacaggatcatcc 124
Query: 346 cgcgacacgtactgctggcgatccgcaacgatgaggagctcgggaagctactggccggcg 405
|||| ||||| |||||||||||| | ||||| ||||||||||| ||||| ||||||||||
Sbjct: 125 cgcgccacgtgctgctggcgatcaggaacgacgaggagctcggcaagctgctggccggcg 184
Query: 406 tcaccatcgcacacggcggggttctgcccaacatcaaccctgtgctgctccccaagaa 463
| |||||||| ||||| || || ||||||||||||||||| |||||||| ||||||||
Sbjct: 185 tgaccatcgcgcacggaggcgtgctgcccaacatcaacccggtgctgctgcccaagaa 242
>gb|C96964.1|C96964 C96964 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C50288_1A, mRNA sequence
Length = 377
Score = 226 bits (114), Expect = 2e-056
Identities = 214/249 (85%)
Strand = Plus / Plus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || |||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 129 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 188
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
|| |||||||| |||| |||||| ||||||| ||||||||||||||||||| |||||
Sbjct: 189 ccntaacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccgtntacct 248
Query: 260 cgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcg 319
||| |||||||||||||||||||| |||||| | || ||| | || |||||||| || |
Sbjct: 249 cgccgccgtcctcgagtacctcgctgccgaggtgctggagntcgccgggaacgcggccag 308
Query: 320 ggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgatga 379
|||||||||||||||| ||||||| ||| | ||||| || ||||||||| | ||||| ||
Sbjct: 309 ggacaacaagaagaacaggatcatnccgggccacgtgctnctggcgatcaggaacgacga 368
Query: 380 ggagctcgg 388
|||||||||
Sbjct: 369 ggagctcgg 377
>gb|AU063029.2|AU063029 AU063029 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52603_5A, mRNA sequence
Length = 402
Score = 226 bits (114), Expect = 2e-056
Identities = 235/270 (87%), Gaps = 4/270 (1%)
Strand = Plus / Plus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || |||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 132 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 191
Query: 200 ccgcta-cctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacc 258
| |||| ||||||| |||| |||||| ||||||| ||||||||||||||||||||||||
Sbjct: 192 c-gctaacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccgtctacc 250
Query: 259 tcgctgccgtcctcgagtacctcgc-cgccgagctcctcgagttggcggggaacgcagcg 317
|||| |||||||||||||||||||| |||||| | || ||| | || |||||||| ||
Sbjct: 251 tcgccgccgtcctcgagtacctcgcttgccgaggtgctggagctcgccgggaacgcggcc 310
Query: 318 cgggacaacaagaagaaccggatcatcccgcgacacgtac-tgctggcgatccgcaacga 376
||||||||||||||||| ||||||||||||| ||||| | ||||||||||| | |||||
Sbjct: 311 agggacaacaagaagaacaggatcatcccgcgccacgtgcttgctggcgatcaggaacga 370
Query: 377 tgaggagctcgggaagctactggccggcgt 406
||||||||||| ||| | |||||||||||
Sbjct: 371 cgaggagctcggcaagttgctggccggcgt 400
>gb|C93673.1|C93673 C93673 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3565_1A, mRNA sequence
Length = 373
Score = 224 bits (113), Expect = 6e-056
Identities = 212/244 (86%), Gaps = 1/244 (0%)
Strand = Plus / Plus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || |||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 131 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 190
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
| ||||||||||| |||| |||||| ||||||| ||||||||||||||||| | |||||
Sbjct: 191 c-gctacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccntttacct 249
Query: 260 cgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcg 319
||| |||||||||||||||||||| |||||| | || ||| | || |||||||| || |
Sbjct: 250 cgccgccgtcctcgagtacctcgctgccgaggtgctggagctcgccgggaacgcggccag 309
Query: 320 ggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgatga 379
|||||||||||||||| ||||||||||||| ||||| ||||| |||||| | ||||| ||
Sbjct: 310 ggacaacaagaagaacaggatcatcccgcgccacgtgctgcttgcgatcaggaacgacga 369
Query: 380 ggag 383
||||
Sbjct: 370 ggag 373
>gb|AU029352.1|AU029352 AU029352 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30213_7A, mRNA sequence
Length = 493
Score = 222 bits (112), Expect = 3e-055
Identities = 217/248 (87%), Gaps = 3/248 (1%)
Strand = Plus / Plus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || |||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 148 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 207
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
| ||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||
Sbjct: 208 c-gctacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccgtctacct 266
Query: 260 cgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcg 319
||| |||||||||||||||||||| |||||| | || ||| | || |||||||| || |
Sbjct: 267 cgccgccgtcctcgagtacctcgctgccgaggtgctggagctcgccgggaacgcggccag 326
Query: 320 ggacaac-aagaagaaccggatcatcccgcgacacgtactgctggc-gatccgcaacgat 377
||||||| ||||||||| ||||||||||||| ||||| |||||||| |||| | |||||
Sbjct: 327 ggacaacaaagaagaacaggatcatcccgcgccacgtgctgctggcggatcaggaacgac 386
Query: 378 gaggagct 385
||||||||
Sbjct: 387 gaggagct 394
>gb|AU164949.1|AU164949 AU164949 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61863, mRNA sequence
Length = 498
Score = 220 bits (111), Expect = 1e-054
Identities = 229/263 (87%), Gaps = 4/263 (1%)
Strand = Plus / Plus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || |||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 154 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 213
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
| ||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||
Sbjct: 214 c-gctacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccgtctacct 272
Query: 260 cgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcg 319
||| |||||||||||||||||||| |||||| | || ||| | || |||||||| || |
Sbjct: 273 cgccgccgtcctcgagtacctcgctgccgaggtgctggagctcgccgggaacgcggccag 332
Query: 320 ggacaacaagaagaaccgga-tcatcccgcgacacgtactgct-ggcga-tccgcaacga 376
|||||||||||||||| ||| |||||||||| ||||| ||||| ||||| || | |||||
Sbjct: 333 ggacaacaagaagaacaggattcatcccgcgccacgtgctgctgggcgattcaggaacga 392
Query: 377 tgaggagctcgggaagctactgg 399
||||||||||| ||||| ||||
Sbjct: 393 cgaggagctcggcaagctgctgg 415
>gb|AU064367.1|AU064367 AU064367 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30250_1A, mRNA sequence
Length = 467
Score = 218 bits (110), Expect = 4e-054
Identities = 190/217 (87%)
Strand = Plus / Plus
Query: 247 cccccgtctacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcgg 306
|||||||||||||||| |||||||||||||||||||| |||||| | || ||| | || |
Sbjct: 1 cccccgtctacctcgccgccgtcctcgagtacctcgctgccgaggtgctggagctcgccg 60
Query: 307 ggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcga 366
||||||| || ||||||||||||||||| ||||||||||||| ||||| ||||||||||
Sbjct: 61 ggaacgcggccagggacaacaagaagaacaggatcatcccgcgccacgtgctgctggcga 120
Query: 367 tccgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcgggg 426
|| | ||||| ||||||||||| ||||| ||||||||||| ||||| || ||||| || |
Sbjct: 121 tcaggaacgacgaggagctcggcaagctgctggccggcgtgaccatngcgcacggaggcg 180
Query: 427 ttctgcccaacatcaaccctgtgctgctccccaagaa 463
| ||||||||||||||||| |||||||| ||||||||
Sbjct: 181 tgctgcccaacatcaacccggtgctgctgcccaagaa 217
>gb|C27961.1|C27961 C27961 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C53552_1A, mRNA sequence
Length = 430
Score = 214 bits (108), Expect = 6e-053
Identities = 212/246 (86%), Gaps = 1/246 (0%)
Strand = Plus / Plus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || |||||||| |||||||| |||||||||||||| ||||||||
Sbjct: 127 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcngccgtatcn- 185
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
|| |||||||| |||| |||||| ||||||| |||||||||||||||||||||||||
Sbjct: 186 ccttaacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccgtctacct 245
Query: 260 cgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcgcg 319
||| |||||||||||||||||||| |||||| | || ||| | || |||||||| || |
Sbjct: 246 cgccgccgtcctcgagtacctcgctgccgaggtgctggagctcgccgggaacgcggccag 305
Query: 320 ggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgatga 379
|||||||||||||||| ||||||||||||| ||||| |||||||||||| | ||||| ||
Sbjct: 306 ggacaacaagaagaacaggatcatcccgcgccacgtgctgctggcgatcaggaacgacga 365
Query: 380 ggagct 385
||||||
Sbjct: 366 ggagct 371
>gb|AQ257917.1|AQ257917 nbxb0019G10r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0019G10r, DNA sequence
Length = 713
Score = 212 bits (107), Expect = 2e-052
Identities = 155/171 (90%)
Strand = Plus / Plus
Query: 120 cgcggcgggggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccag 179
|||||||| ||||| || || || |||||||| || |||||||| |||||||| ||||||
Sbjct: 138 cgcggcggcggcgggccgaataataagccggtgtcccgctccgtcaaggccgggctccag 197
Query: 180 ttccccgtaggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggc 239
|||||||| |||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 198 ttccccgtcggccgtatcggccgctacctcaagcaaggccgctactcccagcgcatcggc 257
Query: 240 accggcgcccccgtctacctcgctgccgtcctcgagtacctcgccgccgag 290
||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 258 accggcgcccccgtctacctcgccgccgtcctcgagtacctcgccgtcgag 308
Score = 109 bits (55), Expect = 3e-021
Identities = 121/143 (84%)
Strand = Plus / Plus
Query: 294 ctcgagttggcggggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacac 353
|||||| | ||||||||||| ||||||||||||| ||||||||||||||||||||| ||
Sbjct: 388 ctcgagcttgcggggaacgcggcgcgggacaacatgaagaaccggatcatcccgcggtac 447
Query: 354 gtactgctggcgatccgcaacgatgaggagctcgggaagctactggccggcgtcaccatc 413
|| ||||||||||| | ||||| |||||||| ||||||| | | | |||||||||||
Sbjct: 448 gtgctgctggcgattctgaacgactaggagctctggaagcttgttggccgcgtcaccatc 507
Query: 414 gcacacggcggggttctgcccaa 436
| ||||||||||| |||||||
Sbjct: 508 gtgcacggcggggtgttgcccaa 530
>gb|AACV01010765.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg010765, whole
genome shotgun sequence
Length = 49043
Score = 212 bits (107), Expect = 2e-052
Identities = 146/159 (91%)
Strand = Plus / Plus
Query: 128 gggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgt 187
|||||| || |||||||||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 13472 gggcgggccgaagaagaagccggtgtcgcgctccgtcaaggccgggctccagttccccgt 13531
Query: 188 aggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgc 247
||||| |||||||||||||||||| |||| |||||| ||||||| ||||||||||||||
Sbjct: 13532 cggccgcatcggccgctacctcaagaagggccgctacgcccagcgcgtcggcaccggcgc 13591
Query: 248 ccccgtctacctcgctgccgtcctcgagtacctcgccgc 286
||||||||||||||| |||||||||||||||||||||||
Sbjct: 13592 ccccgtctacctcgccgccgtcctcgagtacctcgccgc 13630
Score = 206 bits (104), Expect = 1e-050
Identities = 149/164 (90%)
Strand = Plus / Plus
Query: 306 gggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcg 365
|||||||| ||||||||||||||||||||||||||||||||| | ||||| |||||||||
Sbjct: 13729 gggaacgcggcgcgggacaacaagaagaaccggatcatcccgaggcacgtgctgctggcg 13788
Query: 366 atccgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggg 425
||||||||||| ||||||||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 13789 atccgcaacgacgaggagctcgggaagctgctcgccggggtcaccatcgcgcacggcggc 13848
Query: 426 gttctgcccaacatcaaccctgtgctgctccccaagaaaaccgc 469
|| ||||| ||||||||||| ||||||||||| ||||| |||||
Sbjct: 13849 gtgctgccgaacatcaacccggtgctgctcccgaagaagaccgc 13892
>ref|XM_475081.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 522
Score = 212 bits (107), Expect = 2e-052
Identities = 146/159 (91%)
Strand = Plus / Plus
Query: 128 gggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgt 187
|||||| || |||||||||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 54 gggcgggccgaagaagaagccggtgtcgcgctccgtcaaggccgggctccagttccccgt 113
Query: 188 aggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgc 247
||||| |||||||||||||||||| |||| |||||| ||||||| ||||||||||||||
Sbjct: 114 cggccgcatcggccgctacctcaagaagggccgctacgcccagcgcgtcggcaccggcgc 173
Query: 248 ccccgtctacctcgctgccgtcctcgagtacctcgccgc 286
||||||||||||||| |||||||||||||||||||||||
Sbjct: 174 ccccgtctacctcgccgccgtcctcgagtacctcgccgc 212
Score = 206 bits (104), Expect = 1e-050
Identities = 149/164 (90%)
Strand = Plus / Plus
Query: 306 gggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcg 365
|||||||| ||||||||||||||||||||||||||||||||| | ||||| |||||||||
Sbjct: 283 gggaacgcggcgcgggacaacaagaagaaccggatcatcccgaggcacgtgctgctggcg 342
Query: 366 atccgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggg 425
||||||||||| ||||||||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 343 atccgcaacgacgaggagctcgggaagctgctcgccggggtcaccatcgcgcacggcggc 402
Query: 426 gttctgcccaacatcaaccctgtgctgctccccaagaaaaccgc 469
|| ||||| ||||||||||| ||||||||||| ||||| |||||
Sbjct: 403 gtgctgccgaacatcaacccggtgctgctcccgaagaagaccgc 446
>ref|NT_079870.2| Oryza sativa (japonica cultivar-group)
Length = 867822
Score = 212 bits (107), Expect = 2e-052
Identities = 146/159 (91%)
Strand = Plus / Plus
Query: 128 gggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgt 187
|||||| || |||||||||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 706989 gggcgggccgaagaagaagccggtgtcgcgctccgtcaaggccgggctccagttccccgt 707048
Query: 188 aggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgc 247
||||| |||||||||||||||||| |||| |||||| ||||||| ||||||||||||||
Sbjct: 707049 cggccgcatcggccgctacctcaagaagggccgctacgcccagcgcgtcggcaccggcgc 707108
Query: 248 ccccgtctacctcgctgccgtcctcgagtacctcgccgc 286
||||||||||||||| |||||||||||||||||||||||
Sbjct: 707109 ccccgtctacctcgccgccgtcctcgagtacctcgccgc 707147
Score = 206 bits (104), Expect = 1e-050
Identities = 149/164 (90%)
Strand = Plus / Plus
Query: 306 gggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcg 365
|||||||| ||||||||||||||||||||||||||||||||| | ||||| |||||||||
Sbjct: 707246 gggaacgcggcgcgggacaacaagaagaaccggatcatcccgaggcacgtgctgctggcg 707305
Query: 366 atccgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggg 425
||||||||||| ||||||||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 707306 atccgcaacgacgaggagctcgggaagctgctcgccggggtcaccatcgcgcacggcggc 707365
Query: 426 gttctgcccaacatcaaccctgtgctgctccccaagaaaaccgc 469
|| ||||| ||||||||||| ||||||||||| ||||| |||||
Sbjct: 707366 gtgctgccgaacatcaacccggtgctgctcccgaagaagaccgc 707409
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
OSJNBb0041A22, complete sequence
Length = 117919
Score = 212 bits (107), Expect = 2e-052
Identities = 146/159 (91%)
Strand = Plus / Plus
Query: 128 gggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgt 187
|||||| || |||||||||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 52188 gggcgggccgaagaagaagccggtgtcgcgctccgtcaaggccgggctccagttccccgt 52247
Query: 188 aggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgc 247
||||| |||||||||||||||||| |||| |||||| ||||||| ||||||||||||||
Sbjct: 52248 cggccgcatcggccgctacctcaagaagggccgctacgcccagcgcgtcggcaccggcgc 52307
Query: 248 ccccgtctacctcgctgccgtcctcgagtacctcgccgc 286
||||||||||||||| |||||||||||||||||||||||
Sbjct: 52308 ccccgtctacctcgccgccgtcctcgagtacctcgccgc 52346
Score = 206 bits (104), Expect = 1e-050
Identities = 149/164 (90%)
Strand = Plus / Plus
Query: 306 gggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcg 365
|||||||| ||||||||||||||||||||||||||||||||| | ||||| |||||||||
Sbjct: 52445 gggaacgcggcgcgggacaacaagaagaaccggatcatcccgaggcacgtgctgctggcg 52504
Query: 366 atccgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggg 425
||||||||||| ||||||||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 52505 atccgcaacgacgaggagctcgggaagctgctcgccggggtcaccatcgcgcacggcggc 52564
Query: 426 gttctgcccaacatcaaccctgtgctgctccccaagaaaaccgc 469
|| ||||| ||||||||||| ||||||||||| ||||| |||||
Sbjct: 52565 gtgctgccgaacatcaacccggtgctgctcccgaagaagaccgc 52608
>gb|CH401191.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000028
genomic scaffold, whole genome shotgun sequence
Length = 7678539
Score = 212 bits (107), Expect = 2e-052
Identities = 146/159 (91%)
Strand = Plus / Plus
Query: 128 gggcggccccaagaagaagccggtctctcgctccgtgaaggccggcctccagttccccgt 187
|||||| || |||||||||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 700504 gggcgggccgaagaagaagccggtgtcgcgctccgtcaaggccgggctccagttccccgt 700563
Query: 188 aggccgtatcggccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgc 247
||||| |||||||||||||||||| |||| |||||| ||||||| ||||||||||||||
Sbjct: 700564 cggccgcatcggccgctacctcaagaagggccgctacgcccagcgcgtcggcaccggcgc 700623
Query: 248 ccccgtctacctcgctgccgtcctcgagtacctcgccgc 286
||||||||||||||| |||||||||||||||||||||||
Sbjct: 700624 ccccgtctacctcgccgccgtcctcgagtacctcgccgc 700662
Score = 206 bits (104), Expect = 1e-050
Identities = 149/164 (90%)
Strand = Plus / Plus
Query: 306 gggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcg 365
|||||||| ||||||||||||||||||||||||||||||||| | ||||| |||||||||
Sbjct: 700761 gggaacgcggcgcgggacaacaagaagaaccggatcatcccgaggcacgtgctgctggcg 700820
Query: 366 atccgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggg 425
||||||||||| ||||||||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 700821 atccgcaacgacgaggagctcgggaagctgctcgccggggtcaccatcgcgcacggcggc 700880
Query: 426 gttctgcccaacatcaaccctgtgctgctccccaagaaaaccgc 469
|| ||||| ||||||||||| ||||||||||| ||||| |||||
Sbjct: 700881 gtgctgccgaacatcaacccggtgctgctcccgaagaagaccgc 700924
>gb|D16020.1|D16020 RICC2034A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2034_2A, mRNA sequence
Length = 390
Score = 208 bits (105), Expect = 4e-051
Identities = 215/250 (86%), Gaps = 2/250 (0%)
Strand = Plus / Plus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || |||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 135 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 194
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
| ||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||
Sbjct: 195 c-gctacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccgtctacct 253
Query: 260 cgctgccgtcctcgagtacctcgc-cgccgagctcctcgagttggcggggaacgcagcgc 318
||| | |||||||||||||||||| |||||| | || ||| | || | |||||| ||
Sbjct: 254 cgccgtcgtcctcgagtacctcgcttgccgaggtgctggagctcgccgngaacgcggcca 313
Query: 319 gggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgatg 378
||||||||||||||||| ||||||||||||| ||||| || || |||||| | ||||| |
Sbjct: 314 gggacaacaagaagaacaggatcatcccgcggcacgtgcttctngcgatcaggaacgacg 373
Query: 379 aggagctcgg 388
||||| ||||
Sbjct: 374 aggagntcgg 383
>gb|AU165995.1|AU165995 AU165995 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30463, mRNA sequence
Length = 481
Score = 208 bits (105), Expect = 4e-051
Identities = 183/209 (87%)
Strand = Plus / Plus
Query: 255 tacctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgca 314
|||||||| |||||||||||||||||||| |||||| | || ||| | || ||||||||
Sbjct: 1 tacctcgccgccgtcctcgagtacctcgctgccgaggtgctggagctcgccgggaacgcg 60
Query: 315 gcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaac 374
|| ||||||||||||||||| ||||||||||||| ||||| |||||||||||| | |||
Sbjct: 61 gccagggacaacaagaagaacaggatcatcccgcgccacgtgctgctggcgatcaggaac 120
Query: 375 gatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggggttctgccc 434
|| ||||||||||| ||||| ||||||||||| |||||||| ||||| || || ||||||
Sbjct: 121 gacgaggagctcggcaagctgctggccggcgtgaccatcgcgcacggaggcgtgctgccc 180
Query: 435 aacatcaaccctgtgctgctccccaagaa 463
||||||||||| |||||||| ||||||||
Sbjct: 181 aacatcaacccggtgctgctgcccaagaa 209
>gb|AU095388.1|AU095388 AU095388 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61682, mRNA sequence
Length = 463
Score = 202 bits (102), Expect = 2e-049
Identities = 180/206 (87%)
Strand = Plus / Plus
Query: 258 ctcgctgccgtcctcgagtacctcgccgccgagctcctcgagttggcggggaacgcagcg 317
||||| |||||||||||||||||||| |||||| | || ||| | || |||||||| ||
Sbjct: 1 ctcgccgccgtcctcgagtacctcgctgccgaggtgctggagctcgccgggaacgcggcc 60
Query: 318 cgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcgatccgcaacgat 377
||||||||||||||||| ||||||||||||| ||||| |||||||||||| | |||||
Sbjct: 61 agggacaacaagaagaacaggatcatcccgcgccacgtgctgctggcgatcaggaacgac 120
Query: 378 gaggagctcgggaagctactggccggcgtcaccatcgcacacggcggggttctgcccaac 437
||||||||||| ||||| ||||||||||| |||||||| ||||| || || |||||||||
Sbjct: 121 gaggagctcggcaagctgctggccggcgtgaccatcgcgcacggaggcgtgctgcccaac 180
Query: 438 atcaaccctgtgctgctccccaagaa 463
|||||||| |||||||| ||||||||
Sbjct: 181 atcaacccggtgctgctgcccaagaa 206
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0002D01, from chromosome 3, complete sequence
Length = 187589
Score = 196 bits (99), Expect = 1e-047
Identities = 138/151 (91%)
Strand = Plus / Minus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || |||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 169048 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 168989
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
||||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||
Sbjct: 168988 ccgctacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccgtctacct 168929
Query: 260 cgctgccgtcctcgagtacctcgccgccgag 290
||| |||||||||||||||||||| ||||||
Sbjct: 168928 cgccgccgtcctcgagtacctcgctgccgag 168898
Score = 170 bits (86), Expect = 8e-040
Identities = 140/158 (88%)
Strand = Plus / Minus
Query: 306 gggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcg 365
|||||||| || ||||||||||||||||| ||||||||||||| ||||| |||||||||
Sbjct: 168781 gggaacgcggccagggacaacaagaagaacaggatcatcccgcgccacgtgctgctggcg 168722
Query: 366 atccgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggg 425
||| | ||||| ||||||||||| ||||| ||||||||||| |||||||| ||||| ||
Sbjct: 168721 atcaggaacgacgaggagctcggcaagctgctggccggcgtgaccatcgcgcacggaggc 168662
Query: 426 gttctgcccaacatcaaccctgtgctgctccccaagaa 463
|| ||||||||||||||||| |||||||| ||||||||
Sbjct: 168661 gtgctgcccaacatcaacccggtgctgctgcccaagaa 168624
>gb|AACV01001262.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001262, whole
genome shotgun sequence
Length = 9271
Score = 196 bits (99), Expect = 1e-047
Identities = 138/151 (91%)
Strand = Plus / Plus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || |||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 2495 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 2554
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
||||||||||||| |||| |||||| | ||||| |||||||||||||||||||||||||
Sbjct: 2555 ccgctacctcaagaagggccgctacgcgcagcgcatcggcaccggcgcccccgtctacct 2614
Query: 260 cgctgccgtcctcgagtacctcgccgccgag 290
||| |||||||||||||||||||||||||||
Sbjct: 2615 cgccgccgtcctcgagtacctcgccgccgag 2645
Score = 170 bits (86), Expect = 8e-040
Identities = 140/158 (88%)
Strand = Plus / Plus
Query: 306 gggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcg 365
|||||||| || ||||||||||||||||| ||||||||||||| ||||| |||||||||
Sbjct: 2772 gggaacgcggccagggacaacaagaagaacaggatcatcccgcgccacgtgctgctggcg 2831
Query: 366 atccgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggg 425
||| | ||||| ||||||||||| ||||| ||||||||||| |||||||| ||||| ||
Sbjct: 2832 atcaggaacgacgaggagctcggcaagctgctggccggcgtgaccatcgcgcacggaggc 2891
Query: 426 gttctgcccaacatcaaccctgtgctgctccccaagaa 463
|| ||||||||||||||||| |||||||| ||||||||
Sbjct: 2892 gtgctgcccaacatcaacccggtgctgctgcccaagaa 2929
>gb|AACV01006345.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006345, whole
genome shotgun sequence
Length = 12782
Score = 196 bits (99), Expect = 1e-047
Identities = 138/151 (91%)
Strand = Plus / Minus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || |||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 8210 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 8151
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
||||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||
Sbjct: 8150 ccgctacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccgtctacct 8091
Query: 260 cgctgccgtcctcgagtacctcgccgccgag 290
||| |||||||||||||||||||| ||||||
Sbjct: 8090 cgccgccgtcctcgagtacctcgctgccgag 8060
Score = 170 bits (86), Expect = 8e-040
Identities = 140/158 (88%)
Strand = Plus / Minus
Query: 306 gggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcg 365
|||||||| || ||||||||||||||||| ||||||||||||| ||||| |||||||||
Sbjct: 7943 gggaacgcggccagggacaacaagaagaacaggatcatcccgcgccacgtgctgctggcg 7884
Query: 366 atccgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggg 425
||| | ||||| ||||||||||| ||||| ||||||||||| |||||||| ||||| ||
Sbjct: 7883 atcaggaacgacgaggagctcggcaagctgctggccggcgtgaccatcgcgcacggaggc 7824
Query: 426 gttctgcccaacatcaaccctgtgctgctccccaagaa 463
|| ||||||||||||||||| |||||||| ||||||||
Sbjct: 7823 gtgctgcccaacatcaacccggtgctgctgcccaagaa 7786
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 196 bits (99), Expect = 1e-047
Identities = 138/151 (91%)
Strand = Plus / Plus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || |||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 17495431 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 17495490
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
||||||||||||| |||| |||||| | ||||| |||||||||||||||||||||||||
Sbjct: 17495491 ccgctacctcaagaagggccgctacgcgcagcgcatcggcaccggcgcccccgtctacct 17495550
Query: 260 cgctgccgtcctcgagtacctcgccgccgag 290
||| |||||||||||||||||||||||||||
Sbjct: 17495551 cgccgccgtcctcgagtacctcgccgccgag 17495581
Score = 170 bits (86), Expect = 8e-040
Identities = 140/158 (88%)
Strand = Plus / Plus
Query: 306 gggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcg 365
|||||||| || ||||||||||||||||| ||||||||||||| ||||| |||||||||
Sbjct: 17495708 gggaacgcggccagggacaacaagaagaacaggatcatcccgcgccacgtgctgctggcg 17495767
Query: 366 atccgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggg 425
||| | ||||| ||||||||||| ||||| ||||||||||| |||||||| ||||| ||
Sbjct: 17495768 atcaggaacgacgaggagctcggcaagctgctggccggcgtgaccatcgcgcacggaggc 17495827
Query: 426 gttctgcccaacatcaaccctgtgctgctccccaagaa 463
|| ||||||||||||||||| |||||||| ||||||||
Sbjct: 17495828 gtgctgcccaacatcaacccggtgctgctgcccaagaa 17495865
Score = 52.0 bits (26), Expect = 5e-004
Identities = 81/98 (82%), Gaps = 1/98 (1%)
Strand = Plus / Plus
Query: 366 atccgcaacgatgaggagctcgggaagctactggccggcg-tcaccatcgcacacggcgg 424
||||||||| | |||||||||| |||||| ||| | || | | |||||||| || |||||
Sbjct: 43143962 atccgcaacaacgaggagctcgagaagctgctgtctgggggtgaccatcgcccatggcgg 43144021
Query: 425 ggttctgcccaacatcaaccctgtgctgctccccaaga 462
|| |||||||||||||||| ||||| ||||| ||||
Sbjct: 43144022 agtgctgcccaacatcaacctggtgctcctcccaaaga 43144059
>ref|NT_079926.2| Oryza sativa (japonica cultivar-group)
Length = 8469246
Score = 196 bits (99), Expect = 1e-047
Identities = 138/151 (91%)
Strand = Plus / Plus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || |||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 413663 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 413722
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
||||||||||||| |||| |||||| | ||||| |||||||||||||||||||||||||
Sbjct: 413723 ccgctacctcaagaagggccgctacgcgcagcgcatcggcaccggcgcccccgtctacct 413782
Query: 260 cgctgccgtcctcgagtacctcgccgccgag 290
||| |||||||||||||||||||||||||||
Sbjct: 413783 cgccgccgtcctcgagtacctcgccgccgag 413813
Score = 170 bits (86), Expect = 8e-040
Identities = 140/158 (88%)
Strand = Plus / Plus
Query: 306 gggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcg 365
|||||||| || ||||||||||||||||| ||||||||||||| ||||| |||||||||
Sbjct: 413940 gggaacgcggccagggacaacaagaagaacaggatcatcccgcgccacgtgctgctggcg 413999
Query: 366 atccgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggg 425
||| | ||||| ||||||||||| ||||| ||||||||||| |||||||| ||||| ||
Sbjct: 414000 atcaggaacgacgaggagctcggcaagctgctggccggcgtgaccatcgcgcacggaggc 414059
Query: 426 gttctgcccaacatcaaccctgtgctgctccccaagaa 463
|| ||||||||||||||||| |||||||| ||||||||
Sbjct: 414060 gtgctgcccaacatcaacccggtgctgctgcccaagaa 414097
>ref|NT_107192.1| Oryza sativa (japonica cultivar-group)
Length = 4781381
Score = 196 bits (99), Expect = 1e-047
Identities = 138/151 (91%)
Strand = Plus / Minus
Query: 140 gaagaagccggtctctcgctccgtgaaggccggcctccagttccccgtaggccgtatcgg 199
||||||| |||| || |||||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 815585 gaagaaggcggtgtcgcgctccgtcaaggccgggctccagttccccgtcggccgtatcgg 815526
Query: 200 ccgctacctcaagcagggtcgctactcccagcgtgtcggcaccggcgcccccgtctacct 259
||||||||||||| |||| |||||| ||||||| |||||||||||||||||||||||||
Sbjct: 815525 ccgctacctcaagaagggccgctacgcccagcgcatcggcaccggcgcccccgtctacct 815466
Query: 260 cgctgccgtcctcgagtacctcgccgccgag 290
||| |||||||||||||||||||| ||||||
Sbjct: 815465 cgccgccgtcctcgagtacctcgctgccgag 815435
Score = 170 bits (86), Expect = 8e-040
Identities = 140/158 (88%)
Strand = Plus / Minus
Query: 306 gggaacgcagcgcgggacaacaagaagaaccggatcatcccgcgacacgtactgctggcg 365
|||||||| || ||||||||||||||||| ||||||||||||| ||||| |||||||||
Sbjct: 815318 gggaacgcggccagggacaacaagaagaacaggatcatcccgcgccacgtgctgctggcg 815259
Query: 366 atccgcaacgatgaggagctcgggaagctactggccggcgtcaccatcgcacacggcggg 425
||| | ||||| ||||||||||| ||||| ||||||||||| |||||||| ||||| ||
Sbjct: 815258 atcaggaacgacgaggagctcggcaagctgctggccggcgtgaccatcgcgcacggaggc 815199
Query: 426 gttctgcccaacatcaaccctgtgctgctccccaagaa 463
|| ||||||||||||||||| |||||||| ||||||||
Sbjct: 815198 gtgctgcccaacatcaacccggtgctgctgcccaagaa 815161
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,974,498
Number of Sequences: 438736
Number of extensions: 1974498
Number of successful extensions: 16633
Number of sequences better than 0.5: 203
Number of HSP's better than 0.5 without gapping: 221
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 14409
Number of HSP's gapped (non-prelim): 2149
length of query: 887
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 866
effective length of database: 2,791,206,460
effective search space: 2417184794360
effective search space used: 2417184794360
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)