BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521825.2.1
(2812 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF136268.1|AF136268 Oryza sativa subsp. japonica starch-... 2066 0.0
dbj|D11082.1|RICBE1 Oryza sativa (japonica cultivar-group) ... 2066 0.0
dbj|D10752.1|RICBE Oryza sativa (japonica cultivar-group) m... 2066 0.0
dbj|AK065121.1| Oryza sativa (japonica cultivar-group) cDNA... 2066 0.0
dbj|AK068920.1| Oryza sativa (japonica cultivar-group) cDNA... 2058 0.0
dbj|AK119436.1| Oryza sativa (japonica cultivar-group) cDNA... 2058 0.0
gb|AY302112.1| Oryza sativa (japonica cultivar-group) starc... 2042 0.0
ref|NT_107235.1| Oryza sativa (japonica cultivar-group) 991 0.0
dbj|AP003685.3| Oryza sativa (japonica cultivar-group) geno... 991 0.0
dbj|AP004685.3| Oryza sativa (japonica cultivar-group) geno... 991 0.0
gb|AACV01014965.1| Oryza sativa (japonica cultivar-group) c... 991 0.0
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 991 0.0
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 991 0.0
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 991 0.0
dbj|D10838.1|RICSBE1 Oryza sativa (japonica cultivar-group)... 991 0.0
gb|CB668587.1|CB668587 OSJNEd16I04.r OSJNEd Oryza sativa (j... 967 0.0
gb|CB668586.1|CB668586 OSJNEd16I04.f OSJNEd Oryza sativa (j... 957 0.0
gb|CA999006.1|CA999006 S234M_A09 Rice cold stress germinati... 765 0.0
gb|C99341.1|C99341 C99341 Rice panicle at ripening stage Or... 694 0.0
gb|CF330102.1|CF330102 NACL--05-K23.b1 Rice callus plasmid ... 684 0.0
gb|CF329597.1|CF329597 NACL--04-P17.b1 Rice callus plasmid ... 672 0.0
gb|CF326784.1|CF326784 NACL--01-A02.g1 Rice callus plasmid ... 668 0.0
gb|CF328664.1|CF328664 NACL--03-K20.g1 Rice callus plasmid ... 656 0.0
gb|CF331462.1|CF331462 NACL--07-J14.g1 Rice callus plasmid ... 650 0.0
gb|CF328834.1|CF328834 NACL--03-O21.b1 Rice callus plasmid ... 638 e-180
gb|CB000110.1|CB000110 S345W_D04 Rice cold stress germinati... 622 e-175
gb|CF323068.1|CF323068 HDN--02-N10.g1 OsHDAC1-overexpressin... 519 e-144
gb|CB670827.1|CB670827 OSJNEe04B18.r OSJNEe Oryza sativa (j... 373 e-100
gb|CB670826.1|CB670826 OSJNEe04B18.f OSJNEe Oryza sativa (j... 365 9e-098
gb|CB644683.1|CB644683 OSJNEb06A04.r OSJNEb Oryza sativa (j... 353 3e-094
dbj|AP004004.1| Oryza sativa (japonica cultivar-group) chro... 274 2e-070
gb|C99342.1|C99342 C99342 Rice panicle at ripening stage Or... 258 1e-065
gb|CF196291.1|CF196291 Azvi2.1_B03 AZ-VI Oryza sativa (japo... 256 6e-065
gb|CF196311.1|CF196311 Azvi2.1_D03 AZ-VI Oryza sativa (japo... 256 6e-065
gb|CF196373.1|CF196373 Azvi2.2_B11 AZ-VI Oryza sativa (japo... 256 6e-065
gb|CF196390.1|CF196390 Azvi2.2_D07 AZ-VI Oryza sativa (japo... 256 6e-065
gb|CF196400.1|CF196400 Azvi2.2_E07 AZ-VI Oryza sativa (japo... 256 6e-065
gb|CF196410.1|CF196410 Azvi2.2_F07 AZ-VI Oryza sativa (japo... 256 6e-065
gb|CF196422.1|CF196422 Azvi2.2_G10 AZ-VI Oryza sativa (japo... 256 6e-065
gb|CF329598.1|CF329598 NACL--04-P17.g1 Rice callus plasmid ... 204 2e-049
gb|CF306431.1|CF306431 HDA1--03-N05.g1 OsHDAC1-overexpressi... 176 4e-041
gb|CF326783.1|CF326783 NACL--01-A02.b1 Rice callus plasmid ... 111 2e-021
gb|CF330663.1|CF330663 NACL--06-H13.b1 Rice callus plasmid ... 94 5e-016
gb|CA999094.1|CA999094 S234N_G07 Rice cold stress germinati... 88 3e-014
gb|CA999317.1|CA999317 S234G_B07 Rice cold stress germinati... 88 3e-014
gb|CB000653.1|CB000653 S345L_B12 Rice cold stress germinati... 88 3e-014
gb|CB000365.1|CB000365 S345U_H04 Rice cold stress germinati... 78 3e-011
gb|AU163772.1|AU163772 AU163772 Rice panicle at ripening st... 74 5e-010
gb|CB000500.1|CB000500 S345C_B01 Rice cold stress germinati... 72 2e-009
gb|CF328835.1|CF328835 NACL--03-O21.g1 Rice callus plasmid ... 70 7e-009
gb|AU063169.2|AU063169 AU063169 Rice callus Oryza sativa (j... 60 7e-006
gb|AU063174.2|AU063174 AU063174 Rice callus Oryza sativa (j... 60 7e-006
gb|CF328663.1|CF328663 NACL--03-K20.b1 Rice callus plasmid ... 60 7e-006
gb|CF331461.1|CF331461 NACL--07-J14.b1 Rice callus plasmid ... 60 7e-006
gb|AU311881.1|AU311881 AU311881 Oryza sativa anther cDNA Or... 58 3e-005
dbj|AK108535.1| Oryza sativa (japonica cultivar-group) cDNA... 58 3e-005
ref|XM_466059.1| Oryza sativa (japonica cultivar-group), mRNA 58 3e-005
gb|D48464.1|D48464 RICS14669A Rice green shoot Oryza sativa... 48 0.026
gb|AACV01013539.1| Oryza sativa (japonica cultivar-group) c... 44 0.41
dbj|AP003491.3| Oryza sativa (japonica cultivar-group) geno... 44 0.41
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 44 0.41
gb|CH401210.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.41
>gb|AF136268.1|AF136268 Oryza sativa subsp. japonica starch-branching enzyme I (Rbe1) mRNA,
complete cds
Length = 2768
Score = 2066 bits (1042), Expect = 0.0
Identities = 1797/2048 (87%), Gaps = 3/2048 (0%)
Strand = Plus / Minus
Query: 518 taagccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaag 577
|||||||||||||| |||||||| |||||||||||||| ||||| || |||||||||||
Sbjct: 2304 taagccacacaggtacggggcggggaaaggactttgaatgagttagggcggttgttgaaa 2245
Query: 578 ttcgtttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggcca 637
|| ||||| || || ||||||| || || || ||||||||||||||||| || ||||||
Sbjct: 2244 tttgtttctggtactcctggcattccctcgggagacgtgaagtgatccacatcatggcca 2185
Query: 638 actcttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttccca 697
||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 2184 actcttccatggccaccaaagaccaaagcatcagagtccagagctactctgtacttcccg 2125
Query: 698 ggcaaatcgcatcccactttgtagccctcgtaagttttcttgggatggaaattgaaaaca 757
||||| || ||||| |||||||| |||| ||||||||| |||||||| ||||||||||||
Sbjct: 2124 ggcaagtcacatccgactttgtaacccttgtaagttttgttgggatgaaaattgaaaaca 2065
Query: 758 aaaactaaatctccacgttcaaagacaataaccttttcctcatcgttcatgtcgctgacg 817
||||| ||||||||||||||||||||||||||||| || | |||||||||||||| ||
Sbjct: 2064 aaaaccaaatctccacgttcaaagacaataaccttatctttctcgttcatgtcgctaaca 2005
Query: 818 atctgctttgacgacgaaaggaaggaaaatctctcatcgagcgcattcatcgcttggtca 877
||||||||||| || || |||||||||||| ||| ||||| |||||||| ||||| |||
Sbjct: 2004 atctgctttgatgatgacaggaaggaaaattcctcctcgagtgcattcattgcttgatca 1945
Query: 878 aacgcattcatgtacttgtaccgcaagtgatcagtgtccacaaggctccactgtcgtctg 937
|| |||||||| |||||||| || | |||||||||||| |||||||||||||| ||||||
Sbjct: 1944 aatgcattcatatacttgtatcgaaggtgatcagtgtcgacaaggctccactgacgtctg 1885
Query: 938 catttatcatagctccagttgttcccttctcttggaaagtcaatccattctgggtgacca 997
||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 1884 catttatcatagctccagttgttgccttctcttggaaagtcaatccattctggatggcca 1825
Query: 998 aactcatttcccataaaattcaagtagccatcacctccaagggccattgtgatgaagtga 1057
|||||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||
Sbjct: 1824 aactcattgcccataaaatttaagtagccatcacctccaagggccatcgtaatgaagtga 1765
Query: 1058 atcatcttttggagtgcaatccctcgatcaattgtaggtgaagcaggctgcaagtctgac 1117
|||||||||||||||||||| || || | || |||||||||||||||||||||||||||
Sbjct: 1764 atcatcttttggagtgcaatgccacggttgatggtaggtgaagcaggctgcaagtctgac 1705
Query: 1118 atgccagtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaacaata 1177
|||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||||||
Sbjct: 1704 atgccagtgtacatttccttgtccatcaagagaaatgctatagtcttgtcaccaacaatg 1645
Query: 1178 gactgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagtcaaa 1237
||||||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 1644 gactgatcatggctctcggcataggcaatgcatttttctgtatatctcctgttagtcaaa 1585
Query: 1238 gtatgcgctatttcacccatcgaccactcagagtcatctttattcttcaggtagtcaatc 1297
|| ||| ||||||||| ||| ||||| | ||| ||||| ||||||||||||||||||
Sbjct: 1584 gtttgcactatttcactcattgaccatttgcggtcctctttgttcttcaggtagtcaatc 1525
Query: 1298 catctatcagggatagccattgccaggcgatagtcaaacccaaccccaccttcatcaact 1357
||||||||||| || |||||||||||||| |||||||||| || |||||||||||||||
Sbjct: 1524 catctatcaggaatggccattgccaggcggaagtcaaaccctactccaccttcatcaact 1465
Query: 1358 ggccggcaaaggaccggcatgcctgaaacatcttcagcaacaacagttgcttctggcaag 1417
||||| ||||| || |||||||| ||||||||||||||||||| ||||||||| ||||||
Sbjct: 1464 ggccgacaaagcactggcatgcccgaaacatcttcagcaacaatagttgcttccggcaag 1405
Query: 1418 agtttgtgcattaaatggtttgcaagcatcatgtaaacaactgcatccacagctgtgtcc 1477
||||| ||||||||||||||||| |||||||||||||||| |||||||||| | || |||
Sbjct: 1404 agtttatgcattaaatggtttgcgagcatcatgtaaacaattgcatccacatcggtatcc 1345
Query: 1478 aaactgaaatattcctggtagtttccagtaaaccccacattgataccatggtgatgatac 1537
||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||| ||
Sbjct: 1344 aaactgaaatactccttgtagtttccagtaaatcccttattgataccatggtgatggtat 1285
Query: 1538 agcattgatgtaactccatcaaatcggaagccatcaaacatgaattcatccaaccaatat 1597
|||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 1284 agcattgatgtaaccccatcaaatcggaagccatcaaacatgaattcgtccatccaatat 1225
Query: 1598 ctcaggttagaaagaagaaaccttaatacctcccagttagcatagttgaacagccgacta 1657
|||| |||||||||||||| ||||| |||||||| || |||||||||||||| ||||||
Sbjct: 1224 ctcaaattagaaagaagaaatcttaagacctcccaattggcatagttgaacagacgacta 1165
Query: 1658 tcccaaagtttatgataacctctatctcccgcatgaaaataggactcttgggtgctttgt 1717
||||| |||||||| || || |||||||| | ||||||||| ||||| || ||| |||||
Sbjct: 1164 tcccagagtttatggtagcccctatctcctgtatgaaaataagactcatgagtgttttgt 1105
Query: 1718 ccaacatcatagccatttaaaccatctgtgacattattacttgcatggctatggacaaca 1777
||||| ||||||||||||| |||||| || ||||||||||| ||||||||||||||||||
Sbjct: 1104 ccaacgtcatagccatttagaccatcggtcacattattactcgcatggctatggacaaca 1045
Query: 1778 tccatcagaactcgcaaacccaaactgtgtgccttatcaacaagatatttgaggtcctct 1837
|||||||||||||| || || ||||| |||||||| |||||||||||||| || ||||||
Sbjct: 1044 tccatcagaactcgtaatcctaaactatgtgccttgtcaacaagatatttcagatcctct 985
Query: 1838 ggtgtgcctgatctgctgctaaccgcaaagaaatttgtcacatggtacccgaaagaagca 1897
||||| |||||||||||||| || || || ||||||||||| || ||||| |||||||||
Sbjct: 984 ggtgttcctgatctgctgctgactgcgaaaaaatttgtcacgtgatacccaaaagaagca 925
Query: 1898 tagtacgaatgctccataactgccatcaactgaactgtgttgtagttatttgctcgtatg 1957
||||| ||||| ||||| | |||||| |||||||||||||||||||||||||| ||||||
Sbjct: 924 tagtaggaatgttccatgattgccattaactgaactgtgttgtagttatttgcccgtatg 865
Query: 1958 cgtggcaacacattgtctgcaaattccctatatgtgcttactgctggcttttcaccactc 2017
||||| |||||||||||||||||||| || |||||||||||| |||||| ||||||||||
Sbjct: 864 cgtggtaacacattgtctgcaaattctctgtatgtgcttacttctggctcttcaccactc 805
Query: 2018 atacctacatgggcttcatagatacgtggagcagcaggctttgaaggccgaggatgctta 2077
|| || ||||| || |||||||| ||||||||| |||| |||| ||| ||||||||||||
Sbjct: 804 atccccacatgagcctcatagatgcgtggagcatcaggttttggaggtcgaggatgctta 745
Query: 2078 aatgtgtacctttcagaagcaggaggatcccaatgaacaccatcatagggagctccaaat 2137
|| |||||||||| | || ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 744 aacacgtacctttcacaggctggaggatcccagtgtacaccatcatatggagctccaaat 685
Query: 2138 ttagaggcatcaacagtcgcataacgaatcaatgctggaatacgatcaacccatactcca 2197
||||||||||||| ||| |||||||||||| |||| |||||||||||||||||| |||||
Sbjct: 684 ttagaggcatcaaaagttgcataacgaatccatgcgggaatacgatcaacccatgctcca 625
Query: 2198 cc---atgtagaaagcgaaatttaaccttggaattgtgagggatggcaggtttccctttg 2254
|| ||| ||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 624 cccccatgcctaaagcgaaatttaaccttggaattgtgagggatggcaggcttcccattg 565
Query: 2255 acatggtcaattttgatcgaccaaacaccaaatttatccttctccatcttatggtttgca 2314
||||| ||| ||||| ||||||| ||||||||||||||||||||||| || ||||||
Sbjct: 564 acatgtgaaatcttgattgaccaaatgccaaatttatccttctccatcttgtgttttgca 505
Query: 2315 ccattccagtcattgaagtcaccaataagctctgcctcctgcgcagcaggtgcccattca 2374
|||||||||| |||||| |||||||| |||| ||| || || |||||||| |||||||||
Sbjct: 504 ccattccagttattgaactcaccaatgagctgtgcttcttgtgcagcaggcgcccattca 445
Query: 2375 cgatatacagttccatcctcatttgtattaatcccaaatttcaaatagcctttagaaaaa 2434
||||||| || || | ||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 444 cgatatattgtggcaccatcaactgtattaatcccaaacttcaaatagcctttagaaaat 385
Query: 2435 gattcaagacttccctcattttcttcaattgatcctttctgctctaggaatcttttcatc 2494
|||||| | ||||||| || |||||| | |||||| || ||| ||||||| |||
Sbjct: 384 tcttcaaggcccccctcatgtttttcaatcaggcatttctggtcgaggtatctttttatc 325
Query: 2495 cggtacctgaaatggtccttgaatatctccagcttggggtccaggtcgtatatggggaga 2554
| || |||| || ||||||||| ||||| ||| |||||||| || ||||| || ||
Sbjct: 324 ctatagttgaagtgatccttgaattcctccaacttagggtccagatcatatataggaagg 265
Query: 2555 tggtcgac 2562
||||||||
Sbjct: 264 tggtcgac 257
>dbj|D11082.1|RICBE1 Oryza sativa (japonica cultivar-group) mRNA for branching enzyme-I,
complete cds
Length = 2739
Score = 2066 bits (1042), Expect = 0.0
Identities = 1797/2048 (87%), Gaps = 3/2048 (0%)
Strand = Plus / Minus
Query: 518 taagccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaag 577
|||||||||||||| |||||||| |||||||||||||| ||||| || |||||||||||
Sbjct: 2283 taagccacacaggtacggggcggggaaaggactttgaatgagttagggcggttgttgaaa 2224
Query: 578 ttcgtttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggcca 637
|| ||||| || || ||||||| || || || ||||||||||||||||| || ||||||
Sbjct: 2223 tttgtttctggtactcctggcattccctcgggagacgtgaagtgatccacatcatggcca 2164
Query: 638 actcttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttccca 697
||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 2163 actcttccatggccaccaaagaccaaagcatcagagtccagagctactctgtacttcccg 2104
Query: 698 ggcaaatcgcatcccactttgtagccctcgtaagttttcttgggatggaaattgaaaaca 757
||||| || ||||| |||||||| |||| ||||||||| |||||||| ||||||||||||
Sbjct: 2103 ggcaagtcacatccgactttgtaacccttgtaagttttgttgggatgaaaattgaaaaca 2044
Query: 758 aaaactaaatctccacgttcaaagacaataaccttttcctcatcgttcatgtcgctgacg 817
||||| ||||||||||||||||||||||||||||| || | |||||||||||||| ||
Sbjct: 2043 aaaaccaaatctccacgttcaaagacaataaccttatctttctcgttcatgtcgctaaca 1984
Query: 818 atctgctttgacgacgaaaggaaggaaaatctctcatcgagcgcattcatcgcttggtca 877
||||||||||| || || |||||||||||| ||| ||||| |||||||| ||||| |||
Sbjct: 1983 atctgctttgatgatgacaggaaggaaaattcctcctcgagtgcattcattgcttgatca 1924
Query: 878 aacgcattcatgtacttgtaccgcaagtgatcagtgtccacaaggctccactgtcgtctg 937
|| |||||||| |||||||| || | |||||||||||| |||||||||||||| ||||||
Sbjct: 1923 aatgcattcatatacttgtatcgaaggtgatcagtgtcgacaaggctccactgacgtctg 1864
Query: 938 catttatcatagctccagttgttcccttctcttggaaagtcaatccattctgggtgacca 997
||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 1863 catttatcatagctccagttgttgccttctcttggaaagtcaatccattctggatggcca 1804
Query: 998 aactcatttcccataaaattcaagtagccatcacctccaagggccattgtgatgaagtga 1057
|||||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||
Sbjct: 1803 aactcattgcccataaaatttaagtagccatcacctccaagggccatcgtaatgaagtga 1744
Query: 1058 atcatcttttggagtgcaatccctcgatcaattgtaggtgaagcaggctgcaagtctgac 1117
|||||||||||||||||||| || || | || |||||||||||||||||||||||||||
Sbjct: 1743 atcatcttttggagtgcaatgccacggttgatggtaggtgaagcaggctgcaagtctgac 1684
Query: 1118 atgccagtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaacaata 1177
|||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||||||
Sbjct: 1683 atgccagtgtacatttccttgtccatcaagagaaatgctatagtcttgtcaccaacaatg 1624
Query: 1178 gactgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagtcaaa 1237
||||||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 1623 gactgatcatggctctcggcataggcaatgcatttttctgtatatctcctgttagtcaaa 1564
Query: 1238 gtatgcgctatttcacccatcgaccactcagagtcatctttattcttcaggtagtcaatc 1297
|| ||| ||||||||| ||| ||||| | ||| ||||| ||||||||||||||||||
Sbjct: 1563 gtttgcactatttcactcattgaccatttgcggtcctctttgttcttcaggtagtcaatc 1504
Query: 1298 catctatcagggatagccattgccaggcgatagtcaaacccaaccccaccttcatcaact 1357
||||||||||| || |||||||||||||| |||||||||| || |||||||||||||||
Sbjct: 1503 catctatcaggaatggccattgccaggcggaagtcaaaccctactccaccttcatcaact 1444
Query: 1358 ggccggcaaaggaccggcatgcctgaaacatcttcagcaacaacagttgcttctggcaag 1417
||||| ||||| || |||||||| ||||||||||||||||||| ||||||||| ||||||
Sbjct: 1443 ggccgacaaagcactggcatgcccgaaacatcttcagcaacaatagttgcttccggcaag 1384
Query: 1418 agtttgtgcattaaatggtttgcaagcatcatgtaaacaactgcatccacagctgtgtcc 1477
||||| ||||||||||||||||| |||||||||||||||| |||||||||| | || |||
Sbjct: 1383 agtttatgcattaaatggtttgcgagcatcatgtaaacaattgcatccacatcggtatcc 1324
Query: 1478 aaactgaaatattcctggtagtttccagtaaaccccacattgataccatggtgatgatac 1537
||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||| ||
Sbjct: 1323 aaactgaaatactccttgtagtttccagtaaatcccttattgataccatggtgatggtat 1264
Query: 1538 agcattgatgtaactccatcaaatcggaagccatcaaacatgaattcatccaaccaatat 1597
|||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 1263 agcattgatgtaaccccatcaaatcggaagccatcaaacatgaattcgtccatccaatat 1204
Query: 1598 ctcaggttagaaagaagaaaccttaatacctcccagttagcatagttgaacagccgacta 1657
|||| |||||||||||||| ||||| |||||||| || |||||||||||||| ||||||
Sbjct: 1203 ctcaaattagaaagaagaaatcttaagacctcccaattggcatagttgaacagacgacta 1144
Query: 1658 tcccaaagtttatgataacctctatctcccgcatgaaaataggactcttgggtgctttgt 1717
||||| |||||||| || || |||||||| | ||||||||| ||||| || ||| |||||
Sbjct: 1143 tcccagagtttatggtagcccctatctcctgtatgaaaataagactcatgagtgttttgt 1084
Query: 1718 ccaacatcatagccatttaaaccatctgtgacattattacttgcatggctatggacaaca 1777
||||| ||||||||||||| |||||| || ||||||||||| ||||||||||||||||||
Sbjct: 1083 ccaacgtcatagccatttagaccatcggtcacattattactcgcatggctatggacaaca 1024
Query: 1778 tccatcagaactcgcaaacccaaactgtgtgccttatcaacaagatatttgaggtcctct 1837
|||||||||||||| || || ||||| |||||||| |||||||||||||| || ||||||
Sbjct: 1023 tccatcagaactcgtaatcctaaactatgtgccttgtcaacaagatatttcagatcctct 964
Query: 1838 ggtgtgcctgatctgctgctaaccgcaaagaaatttgtcacatggtacccgaaagaagca 1897
||||| |||||||||||||| || || || ||||||||||| || ||||| |||||||||
Sbjct: 963 ggtgttcctgatctgctgctgactgcgaaaaaatttgtcacgtgatacccaaaagaagca 904
Query: 1898 tagtacgaatgctccataactgccatcaactgaactgtgttgtagttatttgctcgtatg 1957
||||| ||||| ||||| | |||||| |||||||||||||||||||||||||| ||||||
Sbjct: 903 tagtaggaatgttccatgattgccattaactgaactgtgttgtagttatttgcccgtatg 844
Query: 1958 cgtggcaacacattgtctgcaaattccctatatgtgcttactgctggcttttcaccactc 2017
||||| |||||||||||||||||||| || |||||||||||| |||||| ||||||||||
Sbjct: 843 cgtggtaacacattgtctgcaaattctctgtatgtgcttacttctggctcttcaccactc 784
Query: 2018 atacctacatgggcttcatagatacgtggagcagcaggctttgaaggccgaggatgctta 2077
|| || ||||| || |||||||| ||||||||| |||| |||| ||| ||||||||||||
Sbjct: 783 atccccacatgagcctcatagatgcgtggagcatcaggttttggaggtcgaggatgctta 724
Query: 2078 aatgtgtacctttcagaagcaggaggatcccaatgaacaccatcatagggagctccaaat 2137
|| |||||||||| | || ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 723 aacacgtacctttcacaggctggaggatcccagtgtacaccatcatatggagctccaaat 664
Query: 2138 ttagaggcatcaacagtcgcataacgaatcaatgctggaatacgatcaacccatactcca 2197
||||||||||||| ||| |||||||||||| |||| |||||||||||||||||| |||||
Sbjct: 663 ttagaggcatcaaaagttgcataacgaatccatgcgggaatacgatcaacccatgctcca 604
Query: 2198 cc---atgtagaaagcgaaatttaaccttggaattgtgagggatggcaggtttccctttg 2254
|| ||| ||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 603 cccccatgcctaaagcgaaatttaaccttggaattgtgagggatggcaggcttcccattg 544
Query: 2255 acatggtcaattttgatcgaccaaacaccaaatttatccttctccatcttatggtttgca 2314
||||| ||| ||||| ||||||| ||||||||||||||||||||||| || ||||||
Sbjct: 543 acatgtgaaatcttgattgaccaaatgccaaatttatccttctccatcttgtgttttgca 484
Query: 2315 ccattccagtcattgaagtcaccaataagctctgcctcctgcgcagcaggtgcccattca 2374
|||||||||| |||||| |||||||| |||| ||| || || |||||||| |||||||||
Sbjct: 483 ccattccagttattgaactcaccaatgagctgtgcttcttgtgcagcaggcgcccattca 424
Query: 2375 cgatatacagttccatcctcatttgtattaatcccaaatttcaaatagcctttagaaaaa 2434
||||||| || || | ||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 423 cgatatattgtggcaccatcaactgtattaatcccaaacttcaaatagcctttagaaaat 364
Query: 2435 gattcaagacttccctcattttcttcaattgatcctttctgctctaggaatcttttcatc 2494
|||||| | ||||||| || |||||| | |||||| || ||| ||||||| |||
Sbjct: 363 tcttcaaggcccccctcatgtttttcaatcaggcatttctggtcgaggtatctttttatc 304
Query: 2495 cggtacctgaaatggtccttgaatatctccagcttggggtccaggtcgtatatggggaga 2554
| || |||| || ||||||||| ||||| ||| |||||||| || ||||| || ||
Sbjct: 303 ctatagttgaagtgatccttgaattcctccaacttagggtccagatcatatataggaagg 244
Query: 2555 tggtcgac 2562
||||||||
Sbjct: 243 tggtcgac 236
>dbj|D10752.1|RICBE Oryza sativa (japonica cultivar-group) mRNA for branching enzyme,
complete cds
Length = 2740
Score = 2066 bits (1042), Expect = 0.0
Identities = 1797/2048 (87%), Gaps = 3/2048 (0%)
Strand = Plus / Minus
Query: 518 taagccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaag 577
|||||||||||||| |||||||| |||||||||||||| ||||| || |||||||||||
Sbjct: 2293 taagccacacaggtacggggcggggaaaggactttgaatgagttagggcggttgttgaaa 2234
Query: 578 ttcgtttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggcca 637
|| ||||| || || ||||||| || || || ||||||||||||||||| || ||||||
Sbjct: 2233 tttgtttctggtactcctggcattccctcgggagacgtgaagtgatccacatcatggcca 2174
Query: 638 actcttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttccca 697
||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 2173 actcttccatggccaccaaagaccaaagcatcagagtccagagctactctgtacttcccg 2114
Query: 698 ggcaaatcgcatcccactttgtagccctcgtaagttttcttgggatggaaattgaaaaca 757
||||| || ||||| |||||||| |||| ||||||||| |||||||| ||||||||||||
Sbjct: 2113 ggcaagtcacatccgactttgtaacccttgtaagttttgttgggatgaaaattgaaaaca 2054
Query: 758 aaaactaaatctccacgttcaaagacaataaccttttcctcatcgttcatgtcgctgacg 817
||||| ||||||||||||||||||||||||||||| || | |||||||||||||| ||
Sbjct: 2053 aaaaccaaatctccacgttcaaagacaataaccttatctttctcgttcatgtcgctaaca 1994
Query: 818 atctgctttgacgacgaaaggaaggaaaatctctcatcgagcgcattcatcgcttggtca 877
||||||||||| || || |||||||||||| ||| ||||| |||||||| ||||| |||
Sbjct: 1993 atctgctttgatgatgacaggaaggaaaattcctcctcgagtgcattcattgcttgatca 1934
Query: 878 aacgcattcatgtacttgtaccgcaagtgatcagtgtccacaaggctccactgtcgtctg 937
|| |||||||| |||||||| || | |||||||||||| |||||||||||||| ||||||
Sbjct: 1933 aatgcattcatatacttgtatcgaaggtgatcagtgtcgacaaggctccactgacgtctg 1874
Query: 938 catttatcatagctccagttgttcccttctcttggaaagtcaatccattctgggtgacca 997
||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 1873 catttatcatagctccagttgttgccttctcttggaaagtcaatccattctggatggcca 1814
Query: 998 aactcatttcccataaaattcaagtagccatcacctccaagggccattgtgatgaagtga 1057
|||||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||
Sbjct: 1813 aactcattgcccataaaatttaagtagccatcacctccaagggccatcgtaatgaagtga 1754
Query: 1058 atcatcttttggagtgcaatccctcgatcaattgtaggtgaagcaggctgcaagtctgac 1117
|||||||||||||||||||| || || | || |||||||||||||||||||||||||||
Sbjct: 1753 atcatcttttggagtgcaatgccacggttgatggtaggtgaagcaggctgcaagtctgac 1694
Query: 1118 atgccagtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaacaata 1177
|||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||||||
Sbjct: 1693 atgccagtgtacatttccttgtccatcaagagaaatgctatagtcttgtcaccaacaatg 1634
Query: 1178 gactgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagtcaaa 1237
||||||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 1633 gactgatcatggctctcggcataggcaatgcatttttctgtatatctcctgttagtcaaa 1574
Query: 1238 gtatgcgctatttcacccatcgaccactcagagtcatctttattcttcaggtagtcaatc 1297
|| ||| ||||||||| ||| ||||| | ||| ||||| ||||||||||||||||||
Sbjct: 1573 gtttgcactatttcactcattgaccatttgcggtcctctttgttcttcaggtagtcaatc 1514
Query: 1298 catctatcagggatagccattgccaggcgatagtcaaacccaaccccaccttcatcaact 1357
||||||||||| || |||||||||||||| |||||||||| || |||||||||||||||
Sbjct: 1513 catctatcaggaatggccattgccaggcggaagtcaaaccctactccaccttcatcaact 1454
Query: 1358 ggccggcaaaggaccggcatgcctgaaacatcttcagcaacaacagttgcttctggcaag 1417
||||| ||||| || |||||||| ||||||||||||||||||| ||||||||| ||||||
Sbjct: 1453 ggccgacaaagcactggcatgcccgaaacatcttcagcaacaatagttgcttccggcaag 1394
Query: 1418 agtttgtgcattaaatggtttgcaagcatcatgtaaacaactgcatccacagctgtgtcc 1477
||||| ||||||||||||||||| |||||||||||||||| |||||||||| | || |||
Sbjct: 1393 agtttatgcattaaatggtttgcgagcatcatgtaaacaattgcatccacatcggtatcc 1334
Query: 1478 aaactgaaatattcctggtagtttccagtaaaccccacattgataccatggtgatgatac 1537
||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||| ||
Sbjct: 1333 aaactgaaatactccttgtagtttccagtaaatcccttattgataccatggtgatggtat 1274
Query: 1538 agcattgatgtaactccatcaaatcggaagccatcaaacatgaattcatccaaccaatat 1597
|||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 1273 agcattgatgtaaccccatcaaatcggaagccatcaaacatgaattcgtccatccaatat 1214
Query: 1598 ctcaggttagaaagaagaaaccttaatacctcccagttagcatagttgaacagccgacta 1657
|||| |||||||||||||| ||||| |||||||| || |||||||||||||| ||||||
Sbjct: 1213 ctcaaattagaaagaagaaatcttaagacctcccaattggcatagttgaacagacgacta 1154
Query: 1658 tcccaaagtttatgataacctctatctcccgcatgaaaataggactcttgggtgctttgt 1717
||||| |||||||| || || |||||||| | ||||||||| ||||| || ||| |||||
Sbjct: 1153 tcccagagtttatggtagcccctatctcctgtatgaaaataagactcatgagtgttttgt 1094
Query: 1718 ccaacatcatagccatttaaaccatctgtgacattattacttgcatggctatggacaaca 1777
||||| ||||||||||||| |||||| || ||||||||||| ||||||||||||||||||
Sbjct: 1093 ccaacgtcatagccatttagaccatcggtcacattattactcgcatggctatggacaaca 1034
Query: 1778 tccatcagaactcgcaaacccaaactgtgtgccttatcaacaagatatttgaggtcctct 1837
|||||||||||||| || || ||||| |||||||| |||||||||||||| || ||||||
Sbjct: 1033 tccatcagaactcgtaatcctaaactatgtgccttgtcaacaagatatttcagatcctct 974
Query: 1838 ggtgtgcctgatctgctgctaaccgcaaagaaatttgtcacatggtacccgaaagaagca 1897
||||| |||||||||||||| || || || ||||||||||| || ||||| |||||||||
Sbjct: 973 ggtgttcctgatctgctgctgactgcgaaaaaatttgtcacgtgatacccaaaagaagca 914
Query: 1898 tagtacgaatgctccataactgccatcaactgaactgtgttgtagttatttgctcgtatg 1957
||||| ||||| ||||| | |||||| |||||||||||||||||||||||||| ||||||
Sbjct: 913 tagtaggaatgttccatgattgccattaactgaactgtgttgtagttatttgcccgtatg 854
Query: 1958 cgtggcaacacattgtctgcaaattccctatatgtgcttactgctggcttttcaccactc 2017
||||| |||||||||||||||||||| || |||||||||||| |||||| ||||||||||
Sbjct: 853 cgtggtaacacattgtctgcaaattctctgtatgtgcttacttctggctcttcaccactc 794
Query: 2018 atacctacatgggcttcatagatacgtggagcagcaggctttgaaggccgaggatgctta 2077
|| || ||||| || |||||||| ||||||||| |||| |||| ||| ||||||||||||
Sbjct: 793 atccccacatgagcctcatagatgcgtggagcatcaggttttggaggtcgaggatgctta 734
Query: 2078 aatgtgtacctttcagaagcaggaggatcccaatgaacaccatcatagggagctccaaat 2137
|| |||||||||| | || ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 733 aacacgtacctttcacaggctggaggatcccagtgtacaccatcatatggagctccaaat 674
Query: 2138 ttagaggcatcaacagtcgcataacgaatcaatgctggaatacgatcaacccatactcca 2197
||||||||||||| ||| |||||||||||| |||| |||||||||||||||||| |||||
Sbjct: 673 ttagaggcatcaaaagttgcataacgaatccatgcgggaatacgatcaacccatgctcca 614
Query: 2198 cc---atgtagaaagcgaaatttaaccttggaattgtgagggatggcaggtttccctttg 2254
|| ||| ||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 613 cccccatgcctaaagcgaaatttaaccttggaattgtgagggatggcaggcttcccattg 554
Query: 2255 acatggtcaattttgatcgaccaaacaccaaatttatccttctccatcttatggtttgca 2314
||||| ||| ||||| ||||||| ||||||||||||||||||||||| || ||||||
Sbjct: 553 acatgtgaaatcttgattgaccaaatgccaaatttatccttctccatcttgtgttttgca 494
Query: 2315 ccattccagtcattgaagtcaccaataagctctgcctcctgcgcagcaggtgcccattca 2374
|||||||||| |||||| |||||||| |||| ||| || || |||||||| |||||||||
Sbjct: 493 ccattccagttattgaactcaccaatgagctgtgcttcttgtgcagcaggcgcccattca 434
Query: 2375 cgatatacagttccatcctcatttgtattaatcccaaatttcaaatagcctttagaaaaa 2434
||||||| || || | ||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 433 cgatatattgtggcaccatcaactgtattaatcccaaacttcaaatagcctttagaaaat 374
Query: 2435 gattcaagacttccctcattttcttcaattgatcctttctgctctaggaatcttttcatc 2494
|||||| | ||||||| || |||||| | |||||| || ||| ||||||| |||
Sbjct: 373 tcttcaaggcccccctcatgtttttcaatcaggcatttctggtcgaggtatctttttatc 314
Query: 2495 cggtacctgaaatggtccttgaatatctccagcttggggtccaggtcgtatatggggaga 2554
| || |||| || ||||||||| ||||| ||| |||||||| || ||||| || ||
Sbjct: 313 ctatagttgaagtgatccttgaattcctccaacttagggtccagatcatatataggaagg 254
Query: 2555 tggtcgac 2562
||||||||
Sbjct: 253 tggtcgac 246
>dbj|AK065121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O19, full
insert sequence
Length = 2729
Score = 2066 bits (1042), Expect = 0.0
Identities = 1797/2048 (87%), Gaps = 3/2048 (0%)
Strand = Plus / Minus
Query: 518 taagccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaag 577
|||||||||||||| |||||||| |||||||||||||| ||||| || |||||||||||
Sbjct: 2225 taagccacacaggtacggggcggggaaaggactttgaatgagttagggcggttgttgaaa 2166
Query: 578 ttcgtttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggcca 637
|| ||||| || || ||||||| || || || ||||||||||||||||| || ||||||
Sbjct: 2165 tttgtttctggtactcctggcattccctcgggagacgtgaagtgatccacatcatggcca 2106
Query: 638 actcttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttccca 697
||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 2105 actcttccatggccaccaaagaccaaagcatcagagtccagagctactctgtacttcccg 2046
Query: 698 ggcaaatcgcatcccactttgtagccctcgtaagttttcttgggatggaaattgaaaaca 757
||||| || ||||| |||||||| |||| ||||||||| |||||||| ||||||||||||
Sbjct: 2045 ggcaagtcacatccgactttgtaacccttgtaagttttgttgggatgaaaattgaaaaca 1986
Query: 758 aaaactaaatctccacgttcaaagacaataaccttttcctcatcgttcatgtcgctgacg 817
||||| ||||||||||||||||||||||||||||| || | |||||||||||||| ||
Sbjct: 1985 aaaaccaaatctccacgttcaaagacaataaccttatctttctcgttcatgtcgctaaca 1926
Query: 818 atctgctttgacgacgaaaggaaggaaaatctctcatcgagcgcattcatcgcttggtca 877
||||||||||| || || |||||||||||| ||| ||||| |||||||| ||||| |||
Sbjct: 1925 atctgctttgatgatgacaggaaggaaaattcctcctcgagtgcattcattgcttgatca 1866
Query: 878 aacgcattcatgtacttgtaccgcaagtgatcagtgtccacaaggctccactgtcgtctg 937
|| |||||||| |||||||| || | |||||||||||| |||||||||||||| ||||||
Sbjct: 1865 aatgcattcatatacttgtatcgaaggtgatcagtgtcgacaaggctccactgacgtctg 1806
Query: 938 catttatcatagctccagttgttcccttctcttggaaagtcaatccattctgggtgacca 997
||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 1805 catttatcatagctccagttgttgccttctcttggaaagtcaatccattctggatggcca 1746
Query: 998 aactcatttcccataaaattcaagtagccatcacctccaagggccattgtgatgaagtga 1057
|||||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||
Sbjct: 1745 aactcattgcccataaaatttaagtagccatcacctccaagggccatcgtaatgaagtga 1686
Query: 1058 atcatcttttggagtgcaatccctcgatcaattgtaggtgaagcaggctgcaagtctgac 1117
|||||||||||||||||||| || || | || |||||||||||||||||||||||||||
Sbjct: 1685 atcatcttttggagtgcaatgccacggttgatggtaggtgaagcaggctgcaagtctgac 1626
Query: 1118 atgccagtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaacaata 1177
|||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||||||
Sbjct: 1625 atgccagtgtacatttccttgtccatcaagagaaatgctatagtcttgtcaccaacaatg 1566
Query: 1178 gactgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagtcaaa 1237
||||||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 1565 gactgatcatggctctcggcataggcaatgcatttttctgtatatctcctgttagtcaaa 1506
Query: 1238 gtatgcgctatttcacccatcgaccactcagagtcatctttattcttcaggtagtcaatc 1297
|| ||| ||||||||| ||| ||||| | ||| ||||| ||||||||||||||||||
Sbjct: 1505 gtttgcactatttcactcattgaccatttgcggtcctctttgttcttcaggtagtcaatc 1446
Query: 1298 catctatcagggatagccattgccaggcgatagtcaaacccaaccccaccttcatcaact 1357
||||||||||| || |||||||||||||| |||||||||| || |||||||||||||||
Sbjct: 1445 catctatcaggaatggccattgccaggcggaagtcaaaccctactccaccttcatcaact 1386
Query: 1358 ggccggcaaaggaccggcatgcctgaaacatcttcagcaacaacagttgcttctggcaag 1417
||||| ||||| || |||||||| ||||||||||||||||||| ||||||||| ||||||
Sbjct: 1385 ggccgacaaagcactggcatgcccgaaacatcttcagcaacaatagttgcttccggcaag 1326
Query: 1418 agtttgtgcattaaatggtttgcaagcatcatgtaaacaactgcatccacagctgtgtcc 1477
||||| ||||||||||||||||| |||||||||||||||| |||||||||| | || |||
Sbjct: 1325 agtttatgcattaaatggtttgcgagcatcatgtaaacaattgcatccacatcggtatcc 1266
Query: 1478 aaactgaaatattcctggtagtttccagtaaaccccacattgataccatggtgatgatac 1537
||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||| ||
Sbjct: 1265 aaactgaaatactccttgtagtttccagtaaatcccttattgataccatggtgatggtat 1206
Query: 1538 agcattgatgtaactccatcaaatcggaagccatcaaacatgaattcatccaaccaatat 1597
|||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 1205 agcattgatgtaaccccatcaaatcggaagccatcaaacatgaattcgtccatccaatat 1146
Query: 1598 ctcaggttagaaagaagaaaccttaatacctcccagttagcatagttgaacagccgacta 1657
|||| |||||||||||||| ||||| |||||||| || |||||||||||||| ||||||
Sbjct: 1145 ctcaaattagaaagaagaaatcttaagacctcccaattggcatagttgaacagacgacta 1086
Query: 1658 tcccaaagtttatgataacctctatctcccgcatgaaaataggactcttgggtgctttgt 1717
||||| |||||||| || || |||||||| | ||||||||| ||||| || ||| |||||
Sbjct: 1085 tcccagagtttatggtagcccctatctcctgtatgaaaataagactcatgagtgttttgt 1026
Query: 1718 ccaacatcatagccatttaaaccatctgtgacattattacttgcatggctatggacaaca 1777
||||| ||||||||||||| |||||| || ||||||||||| ||||||||||||||||||
Sbjct: 1025 ccaacgtcatagccatttagaccatcggtcacattattactcgcatggctatggacaaca 966
Query: 1778 tccatcagaactcgcaaacccaaactgtgtgccttatcaacaagatatttgaggtcctct 1837
|||||||||||||| || || ||||| |||||||| |||||||||||||| || ||||||
Sbjct: 965 tccatcagaactcgtaatcctaaactatgtgccttgtcaacaagatatttcagatcctct 906
Query: 1838 ggtgtgcctgatctgctgctaaccgcaaagaaatttgtcacatggtacccgaaagaagca 1897
||||| |||||||||||||| || || || ||||||||||| || ||||| |||||||||
Sbjct: 905 ggtgttcctgatctgctgctgactgcgaaaaaatttgtcacgtgatacccaaaagaagca 846
Query: 1898 tagtacgaatgctccataactgccatcaactgaactgtgttgtagttatttgctcgtatg 1957
||||| ||||| ||||| | |||||| |||||||||||||||||||||||||| ||||||
Sbjct: 845 tagtaggaatgttccatgattgccattaactgaactgtgttgtagttatttgcccgtatg 786
Query: 1958 cgtggcaacacattgtctgcaaattccctatatgtgcttactgctggcttttcaccactc 2017
||||| |||||||||||||||||||| || |||||||||||| |||||| ||||||||||
Sbjct: 785 cgtggtaacacattgtctgcaaattctctgtatgtgcttacttctggctcttcaccactc 726
Query: 2018 atacctacatgggcttcatagatacgtggagcagcaggctttgaaggccgaggatgctta 2077
|| || ||||| || |||||||| ||||||||| |||| |||| ||| ||||||||||||
Sbjct: 725 atccccacatgagcctcatagatgcgtggagcatcaggttttggaggtcgaggatgctta 666
Query: 2078 aatgtgtacctttcagaagcaggaggatcccaatgaacaccatcatagggagctccaaat 2137
|| |||||||||| | || ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 665 aacacgtacctttcacaggctggaggatcccagtgtacaccatcatatggagctccaaat 606
Query: 2138 ttagaggcatcaacagtcgcataacgaatcaatgctggaatacgatcaacccatactcca 2197
||||||||||||| ||| |||||||||||| |||| |||||||||||||||||| |||||
Sbjct: 605 ttagaggcatcaaaagttgcataacgaatccatgcgggaatacgatcaacccatgctcca 546
Query: 2198 cc---atgtagaaagcgaaatttaaccttggaattgtgagggatggcaggtttccctttg 2254
|| ||| ||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 545 cccccatgcctaaagcgaaatttaaccttggaattgtgagggatggcaggcttcccattg 486
Query: 2255 acatggtcaattttgatcgaccaaacaccaaatttatccttctccatcttatggtttgca 2314
||||| ||| ||||| ||||||| ||||||||||||||||||||||| || ||||||
Sbjct: 485 acatgtgaaatcttgattgaccaaatgccaaatttatccttctccatcttgtgttttgca 426
Query: 2315 ccattccagtcattgaagtcaccaataagctctgcctcctgcgcagcaggtgcccattca 2374
|||||||||| |||||| |||||||| |||| ||| || || |||||||| |||||||||
Sbjct: 425 ccattccagttattgaactcaccaatgagctgtgcttcttgtgcagcaggcgcccattca 366
Query: 2375 cgatatacagttccatcctcatttgtattaatcccaaatttcaaatagcctttagaaaaa 2434
||||||| || || | ||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 365 cgatatattgtggcaccatcaactgtattaatcccaaacttcaaatagcctttagaaaat 306
Query: 2435 gattcaagacttccctcattttcttcaattgatcctttctgctctaggaatcttttcatc 2494
|||||| | ||||||| || |||||| | |||||| || ||| ||||||| |||
Sbjct: 305 tcttcaaggcccccctcatgtttttcaatcaggcatttctggtcgaggtatctttttatc 246
Query: 2495 cggtacctgaaatggtccttgaatatctccagcttggggtccaggtcgtatatggggaga 2554
| || |||| || ||||||||| ||||| ||| |||||||| || ||||| || ||
Sbjct: 245 ctatagttgaagtgatccttgaattcctccaacttagggtccagatcatatataggaagg 186
Query: 2555 tggtcgac 2562
||||||||
Sbjct: 185 tggtcgac 178
>dbj|AK068920.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170H02, full
insert sequence
Length = 3827
Score = 2058 bits (1038), Expect = 0.0
Identities = 1796/2048 (87%), Gaps = 3/2048 (0%)
Strand = Plus / Minus
Query: 518 taagccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaag 577
|||||||||||||| |||||||| |||||||||||||| ||||| || |||||||||||
Sbjct: 3380 taagccacacaggtacggggcggggaaaggactttgaatgagttagggcggttgttgaaa 3321
Query: 578 ttcgtttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggcca 637
|| ||||| || || ||||||| || || || ||||||||||||||||| || ||||||
Sbjct: 3320 tttgtttctggtactcctggcattccctcgggagacgtgaagtgatccacatcatggcca 3261
Query: 638 actcttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttccca 697
||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 3260 actcttccatggccaccaaagaccaaagcatcagagtccagagctactctgtacttcccg 3201
Query: 698 ggcaaatcgcatcccactttgtagccctcgtaagttttcttgggatggaaattgaaaaca 757
||||| || ||||| |||||||| |||| ||||||||| |||||||| ||||||||||||
Sbjct: 3200 ggcaagtcacatccgactttgtaacccttgtaagttttgttgggatgaaaattgaaaaca 3141
Query: 758 aaaactaaatctccacgttcaaagacaataaccttttcctcatcgttcatgtcgctgacg 817
||||| ||||||||||||||||||||||||||||| || | |||||||||||||| ||
Sbjct: 3140 aaaaccaaatctccacgttcaaagacaataaccttatctttctcgttcatgtcgctaaca 3081
Query: 818 atctgctttgacgacgaaaggaaggaaaatctctcatcgagcgcattcatcgcttggtca 877
||||||||||| || || |||||||||||| ||| ||||| |||||||| ||||| |||
Sbjct: 3080 atctgctttgatgatgacaggaaggaaaattcctcctcgagtgcattcattgcttgatca 3021
Query: 878 aacgcattcatgtacttgtaccgcaagtgatcagtgtccacaaggctccactgtcgtctg 937
|| |||||||| |||||||| || | |||||||||||| |||||||||||||| ||||||
Sbjct: 3020 aatgcattcatatacttgtatcgaaggtgatcagtgtcgacaaggctccactgacgtctg 2961
Query: 938 catttatcatagctccagttgttcccttctcttggaaagtcaatccattctgggtgacca 997
||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 2960 catttatcatagctccagttgttgccttctcttggaaagtcaatccattctggatggcca 2901
Query: 998 aactcatttcccataaaattcaagtagccatcacctccaagggccattgtgatgaagtga 1057
|||||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||
Sbjct: 2900 aactcattgcccataaaatttaagtagccatcacctccaagggccatcgtaatgaagtga 2841
Query: 1058 atcatcttttggagtgcaatccctcgatcaattgtaggtgaagcaggctgcaagtctgac 1117
|||||||||||||||||||| || || | || |||||||||||||||||||||||||||
Sbjct: 2840 atcatcttttggagtgcaatgccacggttgatggtaggtgaagcaggctgcaagtctgac 2781
Query: 1118 atgccagtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaacaata 1177
|||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||||||
Sbjct: 2780 atgccagtgtacatttccttgtccatcaagagaaatgctatagtcttgtcaccaacaatg 2721
Query: 1178 gactgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagtcaaa 1237
|||||| |||||||||| ||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 2720 gactgaccatggctctcggcataggcaatgcatttttctgtatatctcctgttagtcaaa 2661
Query: 1238 gtatgcgctatttcacccatcgaccactcagagtcatctttattcttcaggtagtcaatc 1297
|| ||| ||||||||| ||| ||||| | ||| ||||| ||||||||||||||||||
Sbjct: 2660 gtttgcactatttcactcattgaccatttgcggtcctctttgttcttcaggtagtcaatc 2601
Query: 1298 catctatcagggatagccattgccaggcgatagtcaaacccaaccccaccttcatcaact 1357
||||||||||| || |||||||||||||| |||||||||| || |||||||||||||||
Sbjct: 2600 catctatcaggaatggccattgccaggcggaagtcaaaccctactccaccttcatcaact 2541
Query: 1358 ggccggcaaaggaccggcatgcctgaaacatcttcagcaacaacagttgcttctggcaag 1417
||||| ||||| || |||||||| ||||||||||||||||||| ||||||||| ||||||
Sbjct: 2540 ggccgacaaagcactggcatgcccgaaacatcttcagcaacaatagttgcttccggcaag 2481
Query: 1418 agtttgtgcattaaatggtttgcaagcatcatgtaaacaactgcatccacagctgtgtcc 1477
||||| ||||||||||||||||| |||||||||||||||| |||||||||| | || |||
Sbjct: 2480 agtttatgcattaaatggtttgcgagcatcatgtaaacaattgcatccacatcggtatcc 2421
Query: 1478 aaactgaaatattcctggtagtttccagtaaaccccacattgataccatggtgatgatac 1537
||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||| ||
Sbjct: 2420 aaactgaaatactccttgtagtttccagtaaatcccttattgataccatggtgatggtat 2361
Query: 1538 agcattgatgtaactccatcaaatcggaagccatcaaacatgaattcatccaaccaatat 1597
|||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 2360 agcattgatgtaaccccatcaaatcggaagccatcaaacatgaattcgtccatccaatat 2301
Query: 1598 ctcaggttagaaagaagaaaccttaatacctcccagttagcatagttgaacagccgacta 1657
|||| |||||||||||||| ||||| |||||||| || |||||||||||||| ||||||
Sbjct: 2300 ctcaaattagaaagaagaaatcttaagacctcccaattggcatagttgaacagacgacta 2241
Query: 1658 tcccaaagtttatgataacctctatctcccgcatgaaaataggactcttgggtgctttgt 1717
||||| |||||||| || || |||||||| | ||||||||| ||||| || ||| |||||
Sbjct: 2240 tcccagagtttatggtagcccctatctcctgtatgaaaataagactcatgagtgttttgt 2181
Query: 1718 ccaacatcatagccatttaaaccatctgtgacattattacttgcatggctatggacaaca 1777
||||| ||||||||||||| |||||| || ||||||||||| ||||||||||||||||||
Sbjct: 2180 ccaacgtcatagccatttagaccatcggtcacattattactcgcatggctatggacaaca 2121
Query: 1778 tccatcagaactcgcaaacccaaactgtgtgccttatcaacaagatatttgaggtcctct 1837
|||||||||||||| || || ||||| |||||||| |||||||||||||| || ||||||
Sbjct: 2120 tccatcagaactcgtaatcctaaactatgtgccttgtcaacaagatatttcagatcctct 2061
Query: 1838 ggtgtgcctgatctgctgctaaccgcaaagaaatttgtcacatggtacccgaaagaagca 1897
||||| |||||||||||||| || || || ||||||||||| || ||||| |||||||||
Sbjct: 2060 ggtgttcctgatctgctgctgactgcgaaaaaatttgtcacgtgatacccaaaagaagca 2001
Query: 1898 tagtacgaatgctccataactgccatcaactgaactgtgttgtagttatttgctcgtatg 1957
||||| ||||| ||||| | |||||| |||||||||||||||||||||||||| ||||||
Sbjct: 2000 tagtaggaatgttccatgattgccattaactgaactgtgttgtagttatttgcccgtatg 1941
Query: 1958 cgtggcaacacattgtctgcaaattccctatatgtgcttactgctggcttttcaccactc 2017
||||| |||||||||||||||||||| || |||||||||||| |||||| ||||||||||
Sbjct: 1940 cgtggtaacacattgtctgcaaattctctgtatgtgcttacttctggctcttcaccactc 1881
Query: 2018 atacctacatgggcttcatagatacgtggagcagcaggctttgaaggccgaggatgctta 2077
|| || ||||| || |||||||| ||||||||| |||| |||| ||| ||||||||||||
Sbjct: 1880 atccccacatgagcctcatagatgcgtggagcatcaggttttggaggtcgaggatgctta 1821
Query: 2078 aatgtgtacctttcagaagcaggaggatcccaatgaacaccatcatagggagctccaaat 2137
|| |||||||||| | || ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 1820 aacacgtacctttcacaggctggaggatcccagtgtacaccatcatatggagctccaaat 1761
Query: 2138 ttagaggcatcaacagtcgcataacgaatcaatgctggaatacgatcaacccatactcca 2197
||||||||||||| ||| |||||||||||| |||| |||||||||||||||||| |||||
Sbjct: 1760 ttagaggcatcaaaagttgcataacgaatccatgcgggaatacgatcaacccatgctcca 1701
Query: 2198 cc---atgtagaaagcgaaatttaaccttggaattgtgagggatggcaggtttccctttg 2254
|| ||| ||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 1700 cccccatgcctaaagcgaaatttaaccttggaattgtgagggatggcaggcttcccattg 1641
Query: 2255 acatggtcaattttgatcgaccaaacaccaaatttatccttctccatcttatggtttgca 2314
||||| ||| ||||| ||||||| ||||||||||||||||||||||| || ||||||
Sbjct: 1640 acatgtgaaatcttgattgaccaaatgccaaatttatccttctccatcttgtgttttgca 1581
Query: 2315 ccattccagtcattgaagtcaccaataagctctgcctcctgcgcagcaggtgcccattca 2374
|||||||||| |||||| |||||||| |||| ||| || || |||||||| |||||||||
Sbjct: 1580 ccattccagttattgaactcaccaatgagctgtgcttcttgtgcagcaggcgcccattca 1521
Query: 2375 cgatatacagttccatcctcatttgtattaatcccaaatttcaaatagcctttagaaaaa 2434
||||||| || || | ||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 1520 cgatatattgtggcaccatcaactgtattaatcccaaacttcaaatagcctttagaaaat 1461
Query: 2435 gattcaagacttccctcattttcttcaattgatcctttctgctctaggaatcttttcatc 2494
|||||| | ||||||| || |||||| | |||||| || ||| ||||||| |||
Sbjct: 1460 tcttcaaggcccccctcatgtttttcaatcaggcatttctggtcgaggtatctttttatc 1401
Query: 2495 cggtacctgaaatggtccttgaatatctccagcttggggtccaggtcgtatatggggaga 2554
| || |||| || ||||||||| ||||| ||| |||||||| || ||||| || ||
Sbjct: 1400 ctatagttgaagtgatccttgaattcctccaacttagggtccagatcatatataggaagg 1341
Query: 2555 tggtcgac 2562
||||||||
Sbjct: 1340 tggtcgac 1333
>dbj|AK119436.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-B02, full
insert sequence
Length = 3554
Score = 2058 bits (1038), Expect = 0.0
Identities = 1796/2048 (87%), Gaps = 3/2048 (0%)
Strand = Plus / Minus
Query: 518 taagccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaag 577
|||||||||||||| |||||||| |||||||||||||| ||||| || |||||||||||
Sbjct: 2381 taagccacacaggtacggggcggggaaaggactttgaatgagttagggcggttgttgaaa 2322
Query: 578 ttcgtttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggcca 637
|| | ||| || || ||||||| || || || ||||||||||||||||| || ||||||
Sbjct: 2321 tttgcttctggtactcctggcattccctcgggagacgtgaagtgatccacatcatggcca 2262
Query: 638 actcttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttccca 697
||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 2261 actcttccatggccaccaaagaccaaagcatcagagtccagagctactctgtacttcccg 2202
Query: 698 ggcaaatcgcatcccactttgtagccctcgtaagttttcttgggatggaaattgaaaaca 757
||||| || ||||| |||||||| |||| ||||||||| |||||||| ||||||||||||
Sbjct: 2201 ggcaagtcacatccgactttgtaacccttgtaagttttgttgggatgaaaattgaaaaca 2142
Query: 758 aaaactaaatctccacgttcaaagacaataaccttttcctcatcgttcatgtcgctgacg 817
||||| ||||||||||||||||||||||||||||| || | |||||||||||||| ||
Sbjct: 2141 aaaaccaaatctccacgttcaaagacaataaccttatctttctcgttcatgtcgctaaca 2082
Query: 818 atctgctttgacgacgaaaggaaggaaaatctctcatcgagcgcattcatcgcttggtca 877
||||||||||| || || |||||||||||| ||| ||||| |||||||| ||||| |||
Sbjct: 2081 atctgctttgatgatgacaggaaggaaaattcctcctcgagtgcattcattgcttgatca 2022
Query: 878 aacgcattcatgtacttgtaccgcaagtgatcagtgtccacaaggctccactgtcgtctg 937
|| |||||||| |||||||| || | |||||||||||| |||||||||||||| ||||||
Sbjct: 2021 aatgcattcatatacttgtatcgaaggtgatcagtgtcgacaaggctccactgacgtctg 1962
Query: 938 catttatcatagctccagttgttcccttctcttggaaagtcaatccattctgggtgacca 997
||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 1961 catttatcatagctccagttgttgccttctcttggaaagtcaatccattctggatggcca 1902
Query: 998 aactcatttcccataaaattcaagtagccatcacctccaagggccattgtgatgaagtga 1057
|||||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||
Sbjct: 1901 aactcattgcccataaaatttaagtagccatcacctccaagggccatcgtaatgaagtga 1842
Query: 1058 atcatcttttggagtgcaatccctcgatcaattgtaggtgaagcaggctgcaagtctgac 1117
|||||||||||||||||||| || || | || |||||||||||||||||||||||||||
Sbjct: 1841 atcatcttttggagtgcaatgccacggttgatggtaggtgaagcaggctgcaagtctgac 1782
Query: 1118 atgccagtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaacaata 1177
|||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||||||
Sbjct: 1781 atgccagtgtacatttccttgtccatcaagagaaatgctatagtcttgtcaccaacaatg 1722
Query: 1178 gactgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagtcaaa 1237
||||||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 1721 gactgatcatggctctcggcataggcaatgcatttttctgtatatctcctgttagtcaaa 1662
Query: 1238 gtatgcgctatttcacccatcgaccactcagagtcatctttattcttcaggtagtcaatc 1297
|| ||| ||||||||| ||| ||||| | ||| ||||| ||||||||||||||||||
Sbjct: 1661 gtttgcactatttcactcattgaccatttgcggtcctctttgttcttcaggtagtcaatc 1602
Query: 1298 catctatcagggatagccattgccaggcgatagtcaaacccaaccccaccttcatcaact 1357
||||||||||| || |||||||||||||| |||||||||| || |||||||||||||||
Sbjct: 1601 catctatcaggaatggccattgccaggcggaagtcaaaccctactccaccttcatcaact 1542
Query: 1358 ggccggcaaaggaccggcatgcctgaaacatcttcagcaacaacagttgcttctggcaag 1417
||||| ||||| || |||||||| ||||||||||||||||||| ||||||||| ||||||
Sbjct: 1541 ggccgacaaagcactggcatgcccgaaacatcttcagcaacaatagttgcttccggcaag 1482
Query: 1418 agtttgtgcattaaatggtttgcaagcatcatgtaaacaactgcatccacagctgtgtcc 1477
||||| ||||||||||||||||| |||||||||||||||| |||||||||| | || |||
Sbjct: 1481 agtttatgcattaaatggtttgcgagcatcatgtaaacaattgcatccacatcggtatcc 1422
Query: 1478 aaactgaaatattcctggtagtttccagtaaaccccacattgataccatggtgatgatac 1537
||||||||||| |||| ||||||||||||||| ||| |||||||||||||||||| ||
Sbjct: 1421 aaactgaaatactccttgtagtttccagtaaatcccttattgataccatggtgatggtat 1362
Query: 1538 agcattgatgtaactccatcaaatcggaagccatcaaacatgaattcatccaaccaatat 1597
|||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 1361 agcattgatgtaaccccatcaaatcggaagccatcaaacatgaattcgtccatccaatat 1302
Query: 1598 ctcaggttagaaagaagaaaccttaatacctcccagttagcatagttgaacagccgacta 1657
|||| |||||||||||||| ||||| |||||||| || |||||||||||||| ||||||
Sbjct: 1301 ctcaaattagaaagaagaaatcttaagacctcccaattggcatagttgaacagacgacta 1242
Query: 1658 tcccaaagtttatgataacctctatctcccgcatgaaaataggactcttgggtgctttgt 1717
||||| |||||||| || || |||||||| | ||||||||| ||||| || ||| |||||
Sbjct: 1241 tcccagagtttatggtagcccctatctcctgtatgaaaataagactcatgagtgttttgt 1182
Query: 1718 ccaacatcatagccatttaaaccatctgtgacattattacttgcatggctatggacaaca 1777
||||| ||||||||||||| |||||| || ||||||||||| ||||||||||||||||||
Sbjct: 1181 ccaacgtcatagccatttagaccatcggtcacattattactcgcatggctatggacaaca 1122
Query: 1778 tccatcagaactcgcaaacccaaactgtgtgccttatcaacaagatatttgaggtcctct 1837
|||||||||||||| || || ||||| |||||||| |||||||||||||| || ||||||
Sbjct: 1121 tccatcagaactcgtaatcctaaactatgtgccttgtcaacaagatatttcagatcctct 1062
Query: 1838 ggtgtgcctgatctgctgctaaccgcaaagaaatttgtcacatggtacccgaaagaagca 1897
||||| |||||||||||||| || || || ||||||||||| || ||||| |||||||||
Sbjct: 1061 ggtgttcctgatctgctgctgactgcgaaaaaatttgtcacgtgatacccaaaagaagca 1002
Query: 1898 tagtacgaatgctccataactgccatcaactgaactgtgttgtagttatttgctcgtatg 1957
||||| ||||| ||||| | |||||| |||||||||||||||||||||||||| ||||||
Sbjct: 1001 tagtaggaatgttccatgattgccattaactgaactgtgttgtagttatttgcccgtatg 942
Query: 1958 cgtggcaacacattgtctgcaaattccctatatgtgcttactgctggcttttcaccactc 2017
||||| |||||||||||||||||||| || |||||||||||| |||||| ||||||||||
Sbjct: 941 cgtggtaacacattgtctgcaaattctctgtatgtgcttacttctggctcttcaccactc 882
Query: 2018 atacctacatgggcttcatagatacgtggagcagcaggctttgaaggccgaggatgctta 2077
|| || ||||| || |||||||| ||||||||| |||| |||| ||| ||||||||||||
Sbjct: 881 atccccacatgagcctcatagatgcgtggagcatcaggttttggaggtcgaggatgctta 822
Query: 2078 aatgtgtacctttcagaagcaggaggatcccaatgaacaccatcatagggagctccaaat 2137
|| |||||||||| | || ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 821 aacacgtacctttcacaggctggaggatcccagtgtacaccatcatatggagctccaaat 762
Query: 2138 ttagaggcatcaacagtcgcataacgaatcaatgctggaatacgatcaacccatactcca 2197
||||||||||||| ||| |||||||||||| |||| |||||||||||||||||| |||||
Sbjct: 761 ttagaggcatcaaaagttgcataacgaatccatgcgggaatacgatcaacccatgctcca 702
Query: 2198 cc---atgtagaaagcgaaatttaaccttggaattgtgagggatggcaggtttccctttg 2254
|| ||| ||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 701 cccccatgcctaaagcgaaatttaaccttggaattgtgagggatggcaggcttcccattg 642
Query: 2255 acatggtcaattttgatcgaccaaacaccaaatttatccttctccatcttatggtttgca 2314
||||| ||| ||||| ||||||| ||||||||||||||||||||||| || ||||||
Sbjct: 641 acatgtgaaatcttgattgaccaaatgccaaatttatccttctccatcttgtgttttgca 582
Query: 2315 ccattccagtcattgaagtcaccaataagctctgcctcctgcgcagcaggtgcccattca 2374
|||||||||| |||||| |||||||| |||| ||| || || |||||||| |||||||||
Sbjct: 581 ccattccagttattgaactcaccaatgagctgtgcttcttgtgcagcaggcgcccattca 522
Query: 2375 cgatatacagttccatcctcatttgtattaatcccaaatttcaaatagcctttagaaaaa 2434
||||||| || || | ||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 521 cgatatattgtggcaccatcaactgtattaatcccaaacttcaaatagcctttagaaaat 462
Query: 2435 gattcaagacttccctcattttcttcaattgatcctttctgctctaggaatcttttcatc 2494
|||||| | ||||||| || |||||| | |||||| || ||| ||||||| |||
Sbjct: 461 tcttcaaggcccccctcatgtttttcaatcaggcatttctggtcgaggtatctttttatc 402
Query: 2495 cggtacctgaaatggtccttgaatatctccagcttggggtccaggtcgtatatggggaga 2554
| || |||| || ||||||||| ||||| ||| |||||||| || ||||| || ||
Sbjct: 401 ctatagttgaagtgatccttgaattcctccaacttagggtccagatcatatataggaagg 342
Query: 2555 tggtcgac 2562
||||||||
Sbjct: 341 tggtcgac 334
>gb|AY302112.1| Oryza sativa (japonica cultivar-group) starch-branching enzyme 1
(Sbe1) mRNA, complete cds
Length = 2490
Score = 2042 bits (1030), Expect = 0.0
Identities = 1794/2048 (87%), Gaps = 3/2048 (0%)
Strand = Plus / Minus
Query: 518 taagccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaag 577
|||||||||||||| |||||||| |||||||||||||| ||||| || ||| |||||||
Sbjct: 2266 taagccacacaggtacggggcggggaaaggactttgaatgagttagggcggctgttgaaa 2207
Query: 578 ttcgtttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggcca 637
|| ||||| || || ||||||| || || || ||||||||||||||||| || ||||||
Sbjct: 2206 tttgtttctggtactcctggcattccctcgggagacgtgaagtgatccacatcatggcca 2147
Query: 638 actcttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttccca 697
||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 2146 actcttccatggccaccaaagaccaaagcatcagagtccagagctactctgtacttcccg 2087
Query: 698 ggcaaatcgcatcccactttgtagccctcgtaagttttcttgggatggaaattgaaaaca 757
||||| || ||||| |||||||| |||| ||||||||| |||||||| ||||||||||||
Sbjct: 2086 ggcaagtcacatccgactttgtaacccttgtaagttttgttgggatgaaaattgaaaaca 2027
Query: 758 aaaactaaatctccacgttcaaagacaataaccttttcctcatcgttcatgtcgctgacg 817
||||| ||||||||||||||||||||||||||||| || | |||||||||||||| ||
Sbjct: 2026 aaaaccaaatctccacgttcaaagacaataaccttatctttctcgttcatgtcgctaaca 1967
Query: 818 atctgctttgacgacgaaaggaaggaaaatctctcatcgagcgcattcatcgcttggtca 877
||||||||||| || || |||||||||||| ||| ||||| |||||||| ||||| ||
Sbjct: 1966 atctgctttgatgatgacaggaaggaaaattcctcctcgagtgcattcattgcttgatcg 1907
Query: 878 aacgcattcatgtacttgtaccgcaagtgatcagtgtccacaaggctccactgtcgtctg 937
|| |||||||| |||||||| || | |||||||||||| |||||||||||||| ||||||
Sbjct: 1906 aatgcattcatatacttgtatcgaaggtgatcagtgtcgacaaggctccactgacgtctg 1847
Query: 938 catttatcatagctccagttgttcccttctcttggaaagtcaatccattctgggtgacca 997
||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 1846 catttatcatagctccagttgttgccttctcttggaaagtcaatccattctggatggcca 1787
Query: 998 aactcatttcccataaaattcaagtagccatcacctccaagggccattgtgatgaagtga 1057
|||||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||
Sbjct: 1786 aactcattgcccataaaatttaagtagccatcacctccaagggccatcgtaatgaagtga 1727
Query: 1058 atcatcttttggagtgcaatccctcgatcaattgtaggtgaagcaggctgcaagtctgac 1117
|||||||||||||||||||| || || | || |||||||||||||||||||||||||||
Sbjct: 1726 atcatcttttggagtgcaatgccacggttgatggtaggtgaagcaggctgcaagtctgac 1667
Query: 1118 atgccagtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaacaata 1177
|||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||||||
Sbjct: 1666 atgccagtgtacatttccttgtccatcaagagaaatgctatagtcttgtcaccaacaatg 1607
Query: 1178 gactgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagtcaaa 1237
||||||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 1606 gactgatcatggctctcggcataggcaatgcatttttctgtatatctcctgttagtcaaa 1547
Query: 1238 gtatgcgctatttcacccatcgaccactcagagtcatctttattcttcaggtagtcaatc 1297
|| ||| ||||||||| ||| ||||| | ||| ||||| ||||||||||||||||||
Sbjct: 1546 gtttgcactatttcactcattgaccatttgcggtcctctttgttcttcaggtagtcaatc 1487
Query: 1298 catctatcagggatagccattgccaggcgatagtcaaacccaaccccaccttcatcaact 1357
||||||||||| || |||||||||||||| |||||||||| || |||||||||||||||
Sbjct: 1486 catctatcaggaatggccattgccaggcggaagtcaaaccctactccaccttcatcaact 1427
Query: 1358 ggccggcaaaggaccggcatgcctgaaacatcttcagcaacaacagttgcttctggcaag 1417
||||| ||||| || |||||||| ||||||||||||||||||| ||||||||| ||||||
Sbjct: 1426 ggccgacaaagcactggcatgcccgaaacatcttcagcaacaatagttgcttccggcaag 1367
Query: 1418 agtttgtgcattaaatggtttgcaagcatcatgtaaacaactgcatccacagctgtgtcc 1477
||||| ||||||||||||||||| |||||||||||||||| |||||||||| | || |||
Sbjct: 1366 agtttatgcattaaatggtttgcgagcatcatgtaaacaattgcatccacatcggtatcc 1307
Query: 1478 aaactgaaatattcctggtagtttccagtaaaccccacattgataccatggtgatgatac 1537
|||||||| || |||| ||||||||||||||| ||| |||||||||||||||||| ||
Sbjct: 1306 aaactgaagtactccttgtagtttccagtaaatcccttattgataccatggtgatggtat 1247
Query: 1538 agcattgatgtaactccatcaaatcggaagccatcaaacatgaattcatccaaccaatat 1597
|||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 1246 agcattgatgtaaccccatcaaatcggaagccatcaaacatgaattcgtccatccaatat 1187
Query: 1598 ctcaggttagaaagaagaaaccttaatacctcccagttagcatagttgaacagccgacta 1657
|||| |||||||||||||| ||||| |||||||| || |||||||||||||| ||||||
Sbjct: 1186 ctcaaattagaaagaagaaatcttaagacctcccaattggcatagttgaacagacgacta 1127
Query: 1658 tcccaaagtttatgataacctctatctcccgcatgaaaataggactcttgggtgctttgt 1717
||||| |||||||| || || |||||||| | ||||||||| ||||| || ||| |||||
Sbjct: 1126 tcccagagtttatggtagcccctatctcctgtatgaaaataagactcatgagtgttttgt 1067
Query: 1718 ccaacatcatagccatttaaaccatctgtgacattattacttgcatggctatggacaaca 1777
||||| ||||||||||||| |||||| || ||||||||||| ||||||||||||||||||
Sbjct: 1066 ccaacgtcatagccatttagaccatcggtcacattattactcgcatggctatggacaaca 1007
Query: 1778 tccatcagaactcgcaaacccaaactgtgtgccttatcaacaagatatttgaggtcctct 1837
|||||||||||||| || || ||||| |||||||| |||||||||||||| || ||||||
Sbjct: 1006 tccatcagaactcgtaatcctaaactatgtgccttgtcaacaagatatttcagatcctct 947
Query: 1838 ggtgtgcctgatctgctgctaaccgcaaagaaatttgtcacatggtacccgaaagaagca 1897
||||| |||||||||||||| || || || ||||||||||| || ||||| |||||||||
Sbjct: 946 ggtgttcctgatctgctgctgactgcgaaaaaatttgtcacgtgatacccaaaagaagca 887
Query: 1898 tagtacgaatgctccataactgccatcaactgaactgtgttgtagttatttgctcgtatg 1957
||||| ||||| ||||| | |||||| |||||||||||||||||||||||||| ||||||
Sbjct: 886 tagtaggaatgttccatgattgccattaactgaactgtgttgtagttatttgcccgtatg 827
Query: 1958 cgtggcaacacattgtctgcaaattccctatatgtgcttactgctggcttttcaccactc 2017
||||| |||||||||||||||||||| || |||||||||||| |||||| ||||||||||
Sbjct: 826 cgtggtaacacattgtctgcaaattctctgtatgtgcttacttctggctcttcaccactc 767
Query: 2018 atacctacatgggcttcatagatacgtggagcagcaggctttgaaggccgaggatgctta 2077
|| || ||||| || |||||||| ||||||||| |||| |||| ||| ||||||||||||
Sbjct: 766 atccccacatgagcctcatagatgcgtggagcatcaggttttggaggtcgaggatgctta 707
Query: 2078 aatgtgtacctttcagaagcaggaggatcccaatgaacaccatcatagggagctccaaat 2137
|| |||||||||| | || ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 706 aacacgtacctttcacaggctggaggatcccagtgtacaccatcatatggagctccaaat 647
Query: 2138 ttagaggcatcaacagtcgcataacgaatcaatgctggaatacgatcaacccatactcca 2197
||||||||||||| ||| |||||||||||| |||| |||||||||||||||||| |||||
Sbjct: 646 ttagaggcatcaaaagttgcataacgaatccatgcgggaatacgatcaacccatgctcca 587
Query: 2198 cc---atgtagaaagcgaaatttaaccttggaattgtgagggatggcaggtttccctttg 2254
|| ||| ||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 586 cccccatgcctaaagcgaaatttaaccttggaattgtgagggatggcaggcttcccattg 527
Query: 2255 acatggtcaattttgatcgaccaaacaccaaatttatccttctccatcttatggtttgca 2314
||||| ||| ||||| ||||||| ||||||||||||||||||||||| || ||||||
Sbjct: 526 acatgtgaaatcttgattgaccaaatgccaaatttatccttctccatcttgtgttttgca 467
Query: 2315 ccattccagtcattgaagtcaccaataagctctgcctcctgcgcagcaggtgcccattca 2374
|||||||||| |||||| |||||||| |||| ||| || || |||||||| |||||||||
Sbjct: 466 ccattccagttattgaactcaccaatgagctgtgcttcttgtgcagcaggcgcccattca 407
Query: 2375 cgatatacagttccatcctcatttgtattaatcccaaatttcaaatagcctttagaaaaa 2434
||||||| || || | ||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 406 cgatatattgtggcaccatcaactgtattaatcccaaacttcaaatagcctttagaaaat 347
Query: 2435 gattcaagacttccctcattttcttcaattgatcctttctgctctaggaatcttttcatc 2494
|||||| | ||||||| || |||||| | |||||| || ||| ||||||| |||
Sbjct: 346 tcttcaaggcccccctcatgtttttcaatcaggcatttctggtcgaggtatctttttatc 287
Query: 2495 cggtacctgaaatggtccttgaatatctccagcttggggtccaggtcgtatatggggaga 2554
| || |||| || ||||||||| ||||| ||| |||||||| || ||||| || ||
Sbjct: 286 ctatagttgaagtgatccttgaattcctccaacttagggtccagatcatatataggaagg 227
Query: 2555 tggtcgac 2562
||||||||
Sbjct: 226 tggtcgac 219
>ref|NT_107235.1| Oryza sativa (japonica cultivar-group)
Length = 369247
Score = 991 bits (500), Expect = 0.0
Identities = 800/900 (88%)
Strand = Plus / Plus
Query: 1180 ctgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagtcaaagt 1239
||||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||
Sbjct: 22571 ctgatcatggctctcggcataggcaatgcatttttctgtatatctcctgttagtcaaagt 22630
Query: 1240 atgcgctatttcacccatcgaccactcagagtcatctttattcttcaggtagtcaatcca 1299
||| ||||||||| ||| ||||| | ||| ||||| ||||||||||||||||||||
Sbjct: 22631 ttgcactatttcactcattgaccatttgcggtcctctttgttcttcaggtagtcaatcca 22690
Query: 1300 tctatcagggatagccattgccaggcgatagtcaaacccaaccccaccttcatcaactgg 1359
||||||||| || |||||||||||||| |||||||||| || |||||||||||||||||
Sbjct: 22691 tctatcaggaatggccattgccaggcggaagtcaaaccctactccaccttcatcaactgg 22750
Query: 1360 ccggcaaaggaccggcatgcctgaaacatcttcagcaacaacagttgcttctggcaagag 1419
||| ||||| || |||||||| ||||||||||||||||||| ||||||||| ||||||||
Sbjct: 22751 ccgacaaagcactggcatgcccgaaacatcttcagcaacaatagttgcttccggcaagag 22810
Query: 1420 tttgtgcattaaatggtttgcaagcatcatgtaaacaactgcatccacagctgtgtccaa 1479
||| ||||||||||||||||| |||||||||||||||| |||||||||| | || |||||
Sbjct: 22811 tttatgcattaaatggtttgcgagcatcatgtaaacaattgcatccacatcggtatccaa 22870
Query: 1480 actgaaatattcctggtagtttccagtaaaccccacattgataccatggtgatgatacag 1539
||||||||| |||| ||||||||||||||| ||| |||||||||||||||||| || ||
Sbjct: 22871 actgaaatactccttgtagtttccagtaaatcccttattgataccatggtgatggtatag 22930
Query: 1540 cattgatgtaactccatcaaatcggaagccatcaaacatgaattcatccaaccaatatct 1599
|||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 22931 cattgatgtaaccccatcaaatcggaagccatcaaacatgaattcgtccatccaatatct 22990
Query: 1600 caggttagaaagaagaaaccttaatacctcccagttagcatagttgaacagccgactatc 1659
|| |||||||||||||| ||||| |||||||| || |||||||||||||| ||||||||
Sbjct: 22991 caaattagaaagaagaaatcttaagacctcccaattggcatagttgaacagacgactatc 23050
Query: 1660 ccaaagtttatgataacctctatctcccgcatgaaaataggactcttgggtgctttgtcc 1719
||| |||||||| || || |||||||| | ||||||||| ||||| || ||| |||||||
Sbjct: 23051 ccagagtttatggtagcccctatctcctgtatgaaaataagactcatgagtgttttgtcc 23110
Query: 1720 aacatcatagccatttaaaccatctgtgacattattacttgcatggctatggacaacatc 1779
||| ||||||||||||| |||||| || ||||||||||| ||||||||||||||||||||
Sbjct: 23111 aacgtcatagccatttagaccatcggtcacattattactcgcatggctatggacaacatc 23170
Query: 1780 catcagaactcgcaaacccaaactgtgtgccttatcaacaagatatttgaggtcctctgg 1839
|||||||||||| || || ||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 23171 catcagaactcgtaatcctaaactatgtgccttgtcaacaagatatttcagatcctctgg 23230
Query: 1840 tgtgcctgatctgctgctaaccgcaaagaaatttgtcacatggtacccgaaagaagcata 1899
||| |||||||||||||| || || || ||||||||||| || ||||| |||||||||||
Sbjct: 23231 tgttcctgatctgctgctgactgcgaaaaaatttgtcacgtgatacccaaaagaagcata 23290
Query: 1900 gtacgaatgctccataactgccatcaactgaactgtgttgtagttatttgctcgtatgcg 1959
||| ||||| ||||| | |||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 23291 gtaggaatgttccatgattgccattaactgaactgtgttgtagttatttgcccgtatgcg 23350
Query: 1960 tggcaacacattgtctgcaaattccctatatgtgcttactgctggcttttcaccactcat 2019
||| |||||||||||||||||||| || |||||||||||| |||||| ||||||||||||
Sbjct: 23351 tggtaacacattgtctgcaaattctctgtatgtgcttacttctggctcttcaccactcat 23410
Query: 2020 acctacatgggcttcatagatacgtggagcagcaggctttgaaggccgaggatgcttaaa 2079
|| ||||| || |||||||| ||||||||| |||| |||| ||| ||||||||||||||
Sbjct: 23411 ccccacatgagcctcatagatgcgtggagcatcaggttttggaggtcgaggatgcttaaa 23470
Score = 274 bits (138), Expect = 2e-070
Identities = 233/264 (88%), Gaps = 3/264 (1%)
Strand = Plus / Plus
Query: 2085 acctttcagaagcaggaggatcccaatgaacaccatcatagggagctccaaatttagagg 2144
|||||||| | || ||||||||||| || ||||||||||| |||||||||||||||||||
Sbjct: 23584 acctttcacaggctggaggatcccagtgtacaccatcatatggagctccaaatttagagg 23643
Query: 2145 catcaacagtcgcataacgaatcaatgctggaatacgatcaacccatactccacc---at 2201
|||||| ||| |||||||||||| |||| |||||||||||||||||| ||||||| ||
Sbjct: 23644 catcaaaagttgcataacgaatccatgcgggaatacgatcaacccatgctccacccccat 23703
Query: 2202 gtagaaagcgaaatttaaccttggaattgtgagggatggcaggtttccctttgacatggt 2261
| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 23704 gcctaaagcgaaatttaaccttggaattgtgagggatggcaggcttcccattgacatgtg 23763
Query: 2262 caattttgatcgaccaaacaccaaatttatccttctccatcttatggtttgcaccattcc 2321
||| ||||| ||||||| ||||||||||||||||||||||| || |||||||||||||
Sbjct: 23764 aaatcttgattgaccaaatgccaaatttatccttctccatcttgtgttttgcaccattcc 23823
Query: 2322 agtcattgaagtcaccaataagct 2345
||| |||||| |||||||| ||||
Sbjct: 23824 agttattgaactcaccaatgagct 23847
Score = 155 bits (78), Expect = 2e-034
Identities = 93/98 (94%)
Strand = Plus / Plus
Query: 904 gtgatcagtgtccacaaggctccactgtcgtctgcatttatcatagctccagttgttccc 963
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 21388 gtgatcagtgtcgacaaggctccactgacgtctgcatttatcatagctccagttgttgcc 21447
Query: 964 ttctcttggaaagtcaatccattctgggtgaccaaact 1001
||||||||||||||||||||||||||| || |||||||
Sbjct: 21448 ttctcttggaaagtcaatccattctggatggccaaact 21485
Score = 153 bits (77), Expect = 6e-034
Identities = 110/121 (90%)
Strand = Plus / Plus
Query: 1063 cttttggagtgcaatccctcgatcaattgtaggtgaagcaggctgcaagtctgacatgcc 1122
||||||||||||||| || || | || ||||||||||||||||||||||||||||||||
Sbjct: 22142 cttttggagtgcaatgccacggttgatggtaggtgaagcaggctgcaagtctgacatgcc 22201
Query: 1123 agtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaacaatagactg 1182
||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||| |||||
Sbjct: 22202 agtgtacatttccttgtccatcaagagaaatgctatagtcttgtcaccaacaatggactg 22261
Query: 1183 a 1183
|
Sbjct: 22262 a 22262
Score = 107 bits (54), Expect = 3e-020
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 722 ccctcgtaagttttcttgggatggaaattgaaaacaaaaactaaatctccacgttcaaag 781
|||| ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 20572 cccttgtaagttttgttgggatgaaaattgaaaacaaaaaccaaatctccacgttcaaag 20631
Query: 782 acaataacct 791
||||||||||
Sbjct: 20632 acaataacct 20641
Score = 99.6 bits (50), Expect = 8e-018
Identities = 101/118 (85%)
Strand = Plus / Plus
Query: 522 ccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaagttcg 581
|||||||||| |||||||| |||||||||||||| ||||| || ||||||||||| || |
Sbjct: 20174 ccacacaggtacggggcggggaaaggactttgaatgagttagggcggttgttgaaatttg 20233
Query: 582 tttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggccaac 639
|||| || || ||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 20234 tttctggtactcctggcattccctcgggagacgtgaagtgatccacatcatggccaac 20291
Score = 97.6 bits (49), Expect = 3e-017
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 1000 ctcatttcccataaaattcaagtagccatcacctccaagggccattgtgatgaagtgaat 1059
|||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 21922 ctcattgcccataaaatttaagtagccatcacctccaagggccatcgtaatgaagtgaat 21981
Query: 1060 catct 1064
|||||
Sbjct: 21982 catct 21986
Score = 93.7 bits (47), Expect = 5e-016
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 638 actcttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttccca 697
||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 20407 actcttccatggccaccaaagaccaaagcatcagagtccagagctactctgtacttcccg 20466
Query: 698 ggcaaatcgcatcccactttgta 720
||||| || ||||| ||||||||
Sbjct: 20467 ggcaagtcacatccgactttgta 20489
Score = 83.8 bits (42), Expect = 5e-013
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 800 tcgttcatgtcgctgacgatctgctttgacgacgaaaggaaggaaaatctctcatcgagc 859
|||||||||||||| || ||||||||||| || || |||||||||||| ||| |||||
Sbjct: 20815 tcgttcatgtcgctaacaatctgctttgatgatgacaggaaggaaaattcctcctcgagt 20874
Query: 860 gcattcatcgcttggtcaaacgcattcatgtact 893
|||||||| ||||| ||||| |||||||| ||||
Sbjct: 20875 gcattcattgcttgatcaaatgcattcatatact 20908
Score = 58.0 bits (29), Expect = 3e-005
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 2357 gcagcaggtgcccattcacgatatacagttccatcctcatttgtattaatcccaaatttc 2416
|||||||| |||||||||||||||| || || | ||| ||||||||||||||| |||
Sbjct: 24293 gcagcaggcgcccattcacgatatattgtggcaccatcaactgtattaatcccaaacttc 24352
Query: 2417 aaatagcct 2425
|||||||||
Sbjct: 24353 aaatagcct 24361
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0548E04
Length = 138037
Score = 991 bits (500), Expect = 0.0
Identities = 800/900 (88%)
Strand = Plus / Plus
Query: 1180 ctgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagtcaaagt 1239
||||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||
Sbjct: 131805 ctgatcatggctctcggcataggcaatgcatttttctgtatatctcctgttagtcaaagt 131864
Query: 1240 atgcgctatttcacccatcgaccactcagagtcatctttattcttcaggtagtcaatcca 1299
||| ||||||||| ||| ||||| | ||| ||||| ||||||||||||||||||||
Sbjct: 131865 ttgcactatttcactcattgaccatttgcggtcctctttgttcttcaggtagtcaatcca 131924
Query: 1300 tctatcagggatagccattgccaggcgatagtcaaacccaaccccaccttcatcaactgg 1359
||||||||| || |||||||||||||| |||||||||| || |||||||||||||||||
Sbjct: 131925 tctatcaggaatggccattgccaggcggaagtcaaaccctactccaccttcatcaactgg 131984
Query: 1360 ccggcaaaggaccggcatgcctgaaacatcttcagcaacaacagttgcttctggcaagag 1419
||| ||||| || |||||||| ||||||||||||||||||| ||||||||| ||||||||
Sbjct: 131985 ccgacaaagcactggcatgcccgaaacatcttcagcaacaatagttgcttccggcaagag 132044
Query: 1420 tttgtgcattaaatggtttgcaagcatcatgtaaacaactgcatccacagctgtgtccaa 1479
||| ||||||||||||||||| |||||||||||||||| |||||||||| | || |||||
Sbjct: 132045 tttatgcattaaatggtttgcgagcatcatgtaaacaattgcatccacatcggtatccaa 132104
Query: 1480 actgaaatattcctggtagtttccagtaaaccccacattgataccatggtgatgatacag 1539
||||||||| |||| ||||||||||||||| ||| |||||||||||||||||| || ||
Sbjct: 132105 actgaaatactccttgtagtttccagtaaatcccttattgataccatggtgatggtatag 132164
Query: 1540 cattgatgtaactccatcaaatcggaagccatcaaacatgaattcatccaaccaatatct 1599
|||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 132165 cattgatgtaaccccatcaaatcggaagccatcaaacatgaattcgtccatccaatatct 132224
Query: 1600 caggttagaaagaagaaaccttaatacctcccagttagcatagttgaacagccgactatc 1659
|| |||||||||||||| ||||| |||||||| || |||||||||||||| ||||||||
Sbjct: 132225 caaattagaaagaagaaatcttaagacctcccaattggcatagttgaacagacgactatc 132284
Query: 1660 ccaaagtttatgataacctctatctcccgcatgaaaataggactcttgggtgctttgtcc 1719
||| |||||||| || || |||||||| | ||||||||| ||||| || ||| |||||||
Sbjct: 132285 ccagagtttatggtagcccctatctcctgtatgaaaataagactcatgagtgttttgtcc 132344
Query: 1720 aacatcatagccatttaaaccatctgtgacattattacttgcatggctatggacaacatc 1779
||| ||||||||||||| |||||| || ||||||||||| ||||||||||||||||||||
Sbjct: 132345 aacgtcatagccatttagaccatcggtcacattattactcgcatggctatggacaacatc 132404
Query: 1780 catcagaactcgcaaacccaaactgtgtgccttatcaacaagatatttgaggtcctctgg 1839
|||||||||||| || || ||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 132405 catcagaactcgtaatcctaaactatgtgccttgtcaacaagatatttcagatcctctgg 132464
Query: 1840 tgtgcctgatctgctgctaaccgcaaagaaatttgtcacatggtacccgaaagaagcata 1899
||| |||||||||||||| || || || ||||||||||| || ||||| |||||||||||
Sbjct: 132465 tgttcctgatctgctgctgactgcgaaaaaatttgtcacgtgatacccaaaagaagcata 132524
Query: 1900 gtacgaatgctccataactgccatcaactgaactgtgttgtagttatttgctcgtatgcg 1959
||| ||||| ||||| | |||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 132525 gtaggaatgttccatgattgccattaactgaactgtgttgtagttatttgcccgtatgcg 132584
Query: 1960 tggcaacacattgtctgcaaattccctatatgtgcttactgctggcttttcaccactcat 2019
||| |||||||||||||||||||| || |||||||||||| |||||| ||||||||||||
Sbjct: 132585 tggtaacacattgtctgcaaattctctgtatgtgcttacttctggctcttcaccactcat 132644
Query: 2020 acctacatgggcttcatagatacgtggagcagcaggctttgaaggccgaggatgcttaaa 2079
|| ||||| || |||||||| ||||||||| |||| |||| ||| ||||||||||||||
Sbjct: 132645 ccccacatgagcctcatagatgcgtggagcatcaggttttggaggtcgaggatgcttaaa 132704
Score = 274 bits (138), Expect = 2e-070
Identities = 233/264 (88%), Gaps = 3/264 (1%)
Strand = Plus / Plus
Query: 2085 acctttcagaagcaggaggatcccaatgaacaccatcatagggagctccaaatttagagg 2144
|||||||| | || ||||||||||| || ||||||||||| |||||||||||||||||||
Sbjct: 132818 acctttcacaggctggaggatcccagtgtacaccatcatatggagctccaaatttagagg 132877
Query: 2145 catcaacagtcgcataacgaatcaatgctggaatacgatcaacccatactccacc---at 2201
|||||| ||| |||||||||||| |||| |||||||||||||||||| ||||||| ||
Sbjct: 132878 catcaaaagttgcataacgaatccatgcgggaatacgatcaacccatgctccacccccat 132937
Query: 2202 gtagaaagcgaaatttaaccttggaattgtgagggatggcaggtttccctttgacatggt 2261
| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 132938 gcctaaagcgaaatttaaccttggaattgtgagggatggcaggcttcccattgacatgtg 132997
Query: 2262 caattttgatcgaccaaacaccaaatttatccttctccatcttatggtttgcaccattcc 2321
||| ||||| ||||||| ||||||||||||||||||||||| || |||||||||||||
Sbjct: 132998 aaatcttgattgaccaaatgccaaatttatccttctccatcttgtgttttgcaccattcc 133057
Query: 2322 agtcattgaagtcaccaataagct 2345
||| |||||| |||||||| ||||
Sbjct: 133058 agttattgaactcaccaatgagct 133081
Score = 155 bits (78), Expect = 2e-034
Identities = 93/98 (94%)
Strand = Plus / Plus
Query: 904 gtgatcagtgtccacaaggctccactgtcgtctgcatttatcatagctccagttgttccc 963
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 130622 gtgatcagtgtcgacaaggctccactgacgtctgcatttatcatagctccagttgttgcc 130681
Query: 964 ttctcttggaaagtcaatccattctgggtgaccaaact 1001
||||||||||||||||||||||||||| || |||||||
Sbjct: 130682 ttctcttggaaagtcaatccattctggatggccaaact 130719
Score = 153 bits (77), Expect = 6e-034
Identities = 110/121 (90%)
Strand = Plus / Plus
Query: 1063 cttttggagtgcaatccctcgatcaattgtaggtgaagcaggctgcaagtctgacatgcc 1122
||||||||||||||| || || | || ||||||||||||||||||||||||||||||||
Sbjct: 131376 cttttggagtgcaatgccacggttgatggtaggtgaagcaggctgcaagtctgacatgcc 131435
Query: 1123 agtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaacaatagactg 1182
||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||| |||||
Sbjct: 131436 agtgtacatttccttgtccatcaagagaaatgctatagtcttgtcaccaacaatggactg 131495
Query: 1183 a 1183
|
Sbjct: 131496 a 131496
Score = 107 bits (54), Expect = 3e-020
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 722 ccctcgtaagttttcttgggatggaaattgaaaacaaaaactaaatctccacgttcaaag 781
|||| ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 129806 cccttgtaagttttgttgggatgaaaattgaaaacaaaaaccaaatctccacgttcaaag 129865
Query: 782 acaataacct 791
||||||||||
Sbjct: 129866 acaataacct 129875
Score = 99.6 bits (50), Expect = 8e-018
Identities = 101/118 (85%)
Strand = Plus / Plus
Query: 522 ccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaagttcg 581
|||||||||| |||||||| |||||||||||||| ||||| || ||||||||||| || |
Sbjct: 129408 ccacacaggtacggggcggggaaaggactttgaatgagttagggcggttgttgaaatttg 129467
Query: 582 tttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggccaac 639
|||| || || ||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 129468 tttctggtactcctggcattccctcgggagacgtgaagtgatccacatcatggccaac 129525
Score = 97.6 bits (49), Expect = 3e-017
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 1000 ctcatttcccataaaattcaagtagccatcacctccaagggccattgtgatgaagtgaat 1059
|||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 131156 ctcattgcccataaaatttaagtagccatcacctccaagggccatcgtaatgaagtgaat 131215
Query: 1060 catct 1064
|||||
Sbjct: 131216 catct 131220
Score = 93.7 bits (47), Expect = 5e-016
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 638 actcttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttccca 697
||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 129641 actcttccatggccaccaaagaccaaagcatcagagtccagagctactctgtacttcccg 129700
Query: 698 ggcaaatcgcatcccactttgta 720
||||| || ||||| ||||||||
Sbjct: 129701 ggcaagtcacatccgactttgta 129723
Score = 83.8 bits (42), Expect = 5e-013
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 800 tcgttcatgtcgctgacgatctgctttgacgacgaaaggaaggaaaatctctcatcgagc 859
|||||||||||||| || ||||||||||| || || |||||||||||| ||| |||||
Sbjct: 130049 tcgttcatgtcgctaacaatctgctttgatgatgacaggaaggaaaattcctcctcgagt 130108
Query: 860 gcattcatcgcttggtcaaacgcattcatgtact 893
|||||||| ||||| ||||| |||||||| ||||
Sbjct: 130109 gcattcattgcttgatcaaatgcattcatatact 130142
Score = 58.0 bits (29), Expect = 3e-005
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 2357 gcagcaggtgcccattcacgatatacagttccatcctcatttgtattaatcccaaatttc 2416
|||||||| |||||||||||||||| || || | ||| ||||||||||||||| |||
Sbjct: 133527 gcagcaggcgcccattcacgatatattgtggcaccatcaactgtattaatcccaaacttc 133586
Query: 2417 aaatagcct 2425
|||||||||
Sbjct: 133587 aaatagcct 133595
>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0017G10
Length = 166700
Score = 991 bits (500), Expect = 0.0
Identities = 800/900 (88%)
Strand = Plus / Plus
Query: 1180 ctgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagtcaaagt 1239
||||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||
Sbjct: 22571 ctgatcatggctctcggcataggcaatgcatttttctgtatatctcctgttagtcaaagt 22630
Query: 1240 atgcgctatttcacccatcgaccactcagagtcatctttattcttcaggtagtcaatcca 1299
||| ||||||||| ||| ||||| | ||| ||||| ||||||||||||||||||||
Sbjct: 22631 ttgcactatttcactcattgaccatttgcggtcctctttgttcttcaggtagtcaatcca 22690
Query: 1300 tctatcagggatagccattgccaggcgatagtcaaacccaaccccaccttcatcaactgg 1359
||||||||| || |||||||||||||| |||||||||| || |||||||||||||||||
Sbjct: 22691 tctatcaggaatggccattgccaggcggaagtcaaaccctactccaccttcatcaactgg 22750
Query: 1360 ccggcaaaggaccggcatgcctgaaacatcttcagcaacaacagttgcttctggcaagag 1419
||| ||||| || |||||||| ||||||||||||||||||| ||||||||| ||||||||
Sbjct: 22751 ccgacaaagcactggcatgcccgaaacatcttcagcaacaatagttgcttccggcaagag 22810
Query: 1420 tttgtgcattaaatggtttgcaagcatcatgtaaacaactgcatccacagctgtgtccaa 1479
||| ||||||||||||||||| |||||||||||||||| |||||||||| | || |||||
Sbjct: 22811 tttatgcattaaatggtttgcgagcatcatgtaaacaattgcatccacatcggtatccaa 22870
Query: 1480 actgaaatattcctggtagtttccagtaaaccccacattgataccatggtgatgatacag 1539
||||||||| |||| ||||||||||||||| ||| |||||||||||||||||| || ||
Sbjct: 22871 actgaaatactccttgtagtttccagtaaatcccttattgataccatggtgatggtatag 22930
Query: 1540 cattgatgtaactccatcaaatcggaagccatcaaacatgaattcatccaaccaatatct 1599
|||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 22931 cattgatgtaaccccatcaaatcggaagccatcaaacatgaattcgtccatccaatatct 22990
Query: 1600 caggttagaaagaagaaaccttaatacctcccagttagcatagttgaacagccgactatc 1659
|| |||||||||||||| ||||| |||||||| || |||||||||||||| ||||||||
Sbjct: 22991 caaattagaaagaagaaatcttaagacctcccaattggcatagttgaacagacgactatc 23050
Query: 1660 ccaaagtttatgataacctctatctcccgcatgaaaataggactcttgggtgctttgtcc 1719
||| |||||||| || || |||||||| | ||||||||| ||||| || ||| |||||||
Sbjct: 23051 ccagagtttatggtagcccctatctcctgtatgaaaataagactcatgagtgttttgtcc 23110
Query: 1720 aacatcatagccatttaaaccatctgtgacattattacttgcatggctatggacaacatc 1779
||| ||||||||||||| |||||| || ||||||||||| ||||||||||||||||||||
Sbjct: 23111 aacgtcatagccatttagaccatcggtcacattattactcgcatggctatggacaacatc 23170
Query: 1780 catcagaactcgcaaacccaaactgtgtgccttatcaacaagatatttgaggtcctctgg 1839
|||||||||||| || || ||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 23171 catcagaactcgtaatcctaaactatgtgccttgtcaacaagatatttcagatcctctgg 23230
Query: 1840 tgtgcctgatctgctgctaaccgcaaagaaatttgtcacatggtacccgaaagaagcata 1899
||| |||||||||||||| || || || ||||||||||| || ||||| |||||||||||
Sbjct: 23231 tgttcctgatctgctgctgactgcgaaaaaatttgtcacgtgatacccaaaagaagcata 23290
Query: 1900 gtacgaatgctccataactgccatcaactgaactgtgttgtagttatttgctcgtatgcg 1959
||| ||||| ||||| | |||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 23291 gtaggaatgttccatgattgccattaactgaactgtgttgtagttatttgcccgtatgcg 23350
Query: 1960 tggcaacacattgtctgcaaattccctatatgtgcttactgctggcttttcaccactcat 2019
||| |||||||||||||||||||| || |||||||||||| |||||| ||||||||||||
Sbjct: 23351 tggtaacacattgtctgcaaattctctgtatgtgcttacttctggctcttcaccactcat 23410
Query: 2020 acctacatgggcttcatagatacgtggagcagcaggctttgaaggccgaggatgcttaaa 2079
|| ||||| || |||||||| ||||||||| |||| |||| ||| ||||||||||||||
Sbjct: 23411 ccccacatgagcctcatagatgcgtggagcatcaggttttggaggtcgaggatgcttaaa 23470
Score = 274 bits (138), Expect = 2e-070
Identities = 233/264 (88%), Gaps = 3/264 (1%)
Strand = Plus / Plus
Query: 2085 acctttcagaagcaggaggatcccaatgaacaccatcatagggagctccaaatttagagg 2144
|||||||| | || ||||||||||| || ||||||||||| |||||||||||||||||||
Sbjct: 23584 acctttcacaggctggaggatcccagtgtacaccatcatatggagctccaaatttagagg 23643
Query: 2145 catcaacagtcgcataacgaatcaatgctggaatacgatcaacccatactccacc---at 2201
|||||| ||| |||||||||||| |||| |||||||||||||||||| ||||||| ||
Sbjct: 23644 catcaaaagttgcataacgaatccatgcgggaatacgatcaacccatgctccacccccat 23703
Query: 2202 gtagaaagcgaaatttaaccttggaattgtgagggatggcaggtttccctttgacatggt 2261
| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 23704 gcctaaagcgaaatttaaccttggaattgtgagggatggcaggcttcccattgacatgtg 23763
Query: 2262 caattttgatcgaccaaacaccaaatttatccttctccatcttatggtttgcaccattcc 2321
||| ||||| ||||||| ||||||||||||||||||||||| || |||||||||||||
Sbjct: 23764 aaatcttgattgaccaaatgccaaatttatccttctccatcttgtgttttgcaccattcc 23823
Query: 2322 agtcattgaagtcaccaataagct 2345
||| |||||| |||||||| ||||
Sbjct: 23824 agttattgaactcaccaatgagct 23847
Score = 155 bits (78), Expect = 2e-034
Identities = 93/98 (94%)
Strand = Plus / Plus
Query: 904 gtgatcagtgtccacaaggctccactgtcgtctgcatttatcatagctccagttgttccc 963
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 21388 gtgatcagtgtcgacaaggctccactgacgtctgcatttatcatagctccagttgttgcc 21447
Query: 964 ttctcttggaaagtcaatccattctgggtgaccaaact 1001
||||||||||||||||||||||||||| || |||||||
Sbjct: 21448 ttctcttggaaagtcaatccattctggatggccaaact 21485
Score = 153 bits (77), Expect = 6e-034
Identities = 110/121 (90%)
Strand = Plus / Plus
Query: 1063 cttttggagtgcaatccctcgatcaattgtaggtgaagcaggctgcaagtctgacatgcc 1122
||||||||||||||| || || | || ||||||||||||||||||||||||||||||||
Sbjct: 22142 cttttggagtgcaatgccacggttgatggtaggtgaagcaggctgcaagtctgacatgcc 22201
Query: 1123 agtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaacaatagactg 1182
||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||| |||||
Sbjct: 22202 agtgtacatttccttgtccatcaagagaaatgctatagtcttgtcaccaacaatggactg 22261
Query: 1183 a 1183
|
Sbjct: 22262 a 22262
Score = 107 bits (54), Expect = 3e-020
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 722 ccctcgtaagttttcttgggatggaaattgaaaacaaaaactaaatctccacgttcaaag 781
|||| ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 20572 cccttgtaagttttgttgggatgaaaattgaaaacaaaaaccaaatctccacgttcaaag 20631
Query: 782 acaataacct 791
||||||||||
Sbjct: 20632 acaataacct 20641
Score = 99.6 bits (50), Expect = 8e-018
Identities = 101/118 (85%)
Strand = Plus / Plus
Query: 522 ccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaagttcg 581
|||||||||| |||||||| |||||||||||||| ||||| || ||||||||||| || |
Sbjct: 20174 ccacacaggtacggggcggggaaaggactttgaatgagttagggcggttgttgaaatttg 20233
Query: 582 tttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggccaac 639
|||| || || ||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 20234 tttctggtactcctggcattccctcgggagacgtgaagtgatccacatcatggccaac 20291
Score = 97.6 bits (49), Expect = 3e-017
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 1000 ctcatttcccataaaattcaagtagccatcacctccaagggccattgtgatgaagtgaat 1059
|||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 21922 ctcattgcccataaaatttaagtagccatcacctccaagggccatcgtaatgaagtgaat 21981
Query: 1060 catct 1064
|||||
Sbjct: 21982 catct 21986
Score = 93.7 bits (47), Expect = 5e-016
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 638 actcttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttccca 697
||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 20407 actcttccatggccaccaaagaccaaagcatcagagtccagagctactctgtacttcccg 20466
Query: 698 ggcaaatcgcatcccactttgta 720
||||| || ||||| ||||||||
Sbjct: 20467 ggcaagtcacatccgactttgta 20489
Score = 83.8 bits (42), Expect = 5e-013
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 800 tcgttcatgtcgctgacgatctgctttgacgacgaaaggaaggaaaatctctcatcgagc 859
|||||||||||||| || ||||||||||| || || |||||||||||| ||| |||||
Sbjct: 20815 tcgttcatgtcgctaacaatctgctttgatgatgacaggaaggaaaattcctcctcgagt 20874
Query: 860 gcattcatcgcttggtcaaacgcattcatgtact 893
|||||||| ||||| ||||| |||||||| ||||
Sbjct: 20875 gcattcattgcttgatcaaatgcattcatatact 20908
Score = 58.0 bits (29), Expect = 3e-005
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 2357 gcagcaggtgcccattcacgatatacagttccatcctcatttgtattaatcccaaatttc 2416
|||||||| |||||||||||||||| || || | ||| ||||||||||||||| |||
Sbjct: 24293 gcagcaggcgcccattcacgatatattgtggcaccatcaactgtattaatcccaaacttc 24352
Query: 2417 aaatagcct 2425
|||||||||
Sbjct: 24353 aaatagcct 24361
>gb|AACV01014965.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014965, whole
genome shotgun sequence
Length = 41039
Score = 991 bits (500), Expect = 0.0
Identities = 800/900 (88%)
Strand = Plus / Plus
Query: 1180 ctgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagtcaaagt 1239
||||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||
Sbjct: 12631 ctgatcatggctctcggcataggcaatgcatttttctgtatatctcctgttagtcaaagt 12690
Query: 1240 atgcgctatttcacccatcgaccactcagagtcatctttattcttcaggtagtcaatcca 1299
||| ||||||||| ||| ||||| | ||| ||||| ||||||||||||||||||||
Sbjct: 12691 ttgcactatttcactcattgaccatttgcggtcctctttgttcttcaggtagtcaatcca 12750
Query: 1300 tctatcagggatagccattgccaggcgatagtcaaacccaaccccaccttcatcaactgg 1359
||||||||| || |||||||||||||| |||||||||| || |||||||||||||||||
Sbjct: 12751 tctatcaggaatggccattgccaggcggaagtcaaaccctactccaccttcatcaactgg 12810
Query: 1360 ccggcaaaggaccggcatgcctgaaacatcttcagcaacaacagttgcttctggcaagag 1419
||| ||||| || |||||||| ||||||||||||||||||| ||||||||| ||||||||
Sbjct: 12811 ccgacaaagcactggcatgcccgaaacatcttcagcaacaatagttgcttccggcaagag 12870
Query: 1420 tttgtgcattaaatggtttgcaagcatcatgtaaacaactgcatccacagctgtgtccaa 1479
||| ||||||||||||||||| |||||||||||||||| |||||||||| | || |||||
Sbjct: 12871 tttatgcattaaatggtttgcgagcatcatgtaaacaattgcatccacatcggtatccaa 12930
Query: 1480 actgaaatattcctggtagtttccagtaaaccccacattgataccatggtgatgatacag 1539
||||||||| |||| ||||||||||||||| ||| |||||||||||||||||| || ||
Sbjct: 12931 actgaaatactccttgtagtttccagtaaatcccttattgataccatggtgatggtatag 12990
Query: 1540 cattgatgtaactccatcaaatcggaagccatcaaacatgaattcatccaaccaatatct 1599
|||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 12991 cattgatgtaaccccatcaaatcggaagccatcaaacatgaattcgtccatccaatatct 13050
Query: 1600 caggttagaaagaagaaaccttaatacctcccagttagcatagttgaacagccgactatc 1659
|| |||||||||||||| ||||| |||||||| || |||||||||||||| ||||||||
Sbjct: 13051 caaattagaaagaagaaatcttaagacctcccaattggcatagttgaacagacgactatc 13110
Query: 1660 ccaaagtttatgataacctctatctcccgcatgaaaataggactcttgggtgctttgtcc 1719
||| |||||||| || || |||||||| | ||||||||| ||||| || ||| |||||||
Sbjct: 13111 ccagagtttatggtagcccctatctcctgtatgaaaataagactcatgagtgttttgtcc 13170
Query: 1720 aacatcatagccatttaaaccatctgtgacattattacttgcatggctatggacaacatc 1779
||| ||||||||||||| |||||| || ||||||||||| ||||||||||||||||||||
Sbjct: 13171 aacgtcatagccatttagaccatcggtcacattattactcgcatggctatggacaacatc 13230
Query: 1780 catcagaactcgcaaacccaaactgtgtgccttatcaacaagatatttgaggtcctctgg 1839
|||||||||||| || || ||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 13231 catcagaactcgtaatcctaaactatgtgccttgtcaacaagatatttcagatcctctgg 13290
Query: 1840 tgtgcctgatctgctgctaaccgcaaagaaatttgtcacatggtacccgaaagaagcata 1899
||| |||||||||||||| || || || ||||||||||| || ||||| |||||||||||
Sbjct: 13291 tgttcctgatctgctgctgactgcgaaaaaatttgtcacgtgatacccaaaagaagcata 13350
Query: 1900 gtacgaatgctccataactgccatcaactgaactgtgttgtagttatttgctcgtatgcg 1959
||| ||||| ||||| | |||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 13351 gtaggaatgttccatgattgccattaactgaactgtgttgtagttatttgcccgtatgcg 13410
Query: 1960 tggcaacacattgtctgcaaattccctatatgtgcttactgctggcttttcaccactcat 2019
||| |||||||||||||||||||| || |||||||||||| |||||| ||||||||||||
Sbjct: 13411 tggtaacacattgtctgcaaattctctgtatgtgcttacttctggctcttcaccactcat 13470
Query: 2020 acctacatgggcttcatagatacgtggagcagcaggctttgaaggccgaggatgcttaaa 2079
|| ||||| || |||||||| ||||||||| |||| |||| ||| ||||||||||||||
Sbjct: 13471 ccccacatgagcctcatagatgcgtggagcatcaggttttggaggtcgaggatgcttaaa 13530
Score = 274 bits (138), Expect = 2e-070
Identities = 233/264 (88%), Gaps = 3/264 (1%)
Strand = Plus / Plus
Query: 2085 acctttcagaagcaggaggatcccaatgaacaccatcatagggagctccaaatttagagg 2144
|||||||| | || ||||||||||| || ||||||||||| |||||||||||||||||||
Sbjct: 13644 acctttcacaggctggaggatcccagtgtacaccatcatatggagctccaaatttagagg 13703
Query: 2145 catcaacagtcgcataacgaatcaatgctggaatacgatcaacccatactccacc---at 2201
|||||| ||| |||||||||||| |||| |||||||||||||||||| ||||||| ||
Sbjct: 13704 catcaaaagttgcataacgaatccatgcgggaatacgatcaacccatgctccacccccat 13763
Query: 2202 gtagaaagcgaaatttaaccttggaattgtgagggatggcaggtttccctttgacatggt 2261
| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 13764 gcctaaagcgaaatttaaccttggaattgtgagggatggcaggcttcccattgacatgtg 13823
Query: 2262 caattttgatcgaccaaacaccaaatttatccttctccatcttatggtttgcaccattcc 2321
||| ||||| ||||||| ||||||||||||||||||||||| || |||||||||||||
Sbjct: 13824 aaatcttgattgaccaaatgccaaatttatccttctccatcttgtgttttgcaccattcc 13883
Query: 2322 agtcattgaagtcaccaataagct 2345
||| |||||| |||||||| ||||
Sbjct: 13884 agttattgaactcaccaatgagct 13907
Score = 155 bits (78), Expect = 2e-034
Identities = 93/98 (94%)
Strand = Plus / Plus
Query: 904 gtgatcagtgtccacaaggctccactgtcgtctgcatttatcatagctccagttgttccc 963
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 11448 gtgatcagtgtcgacaaggctccactgacgtctgcatttatcatagctccagttgttgcc 11507
Query: 964 ttctcttggaaagtcaatccattctgggtgaccaaact 1001
||||||||||||||||||||||||||| || |||||||
Sbjct: 11508 ttctcttggaaagtcaatccattctggatggccaaact 11545
Score = 153 bits (77), Expect = 6e-034
Identities = 110/121 (90%)
Strand = Plus / Plus
Query: 1063 cttttggagtgcaatccctcgatcaattgtaggtgaagcaggctgcaagtctgacatgcc 1122
||||||||||||||| || || | || ||||||||||||||||||||||||||||||||
Sbjct: 12202 cttttggagtgcaatgccacggttgatggtaggtgaagcaggctgcaagtctgacatgcc 12261
Query: 1123 agtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaacaatagactg 1182
||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||| |||||
Sbjct: 12262 agtgtacatttccttgtccatcaagagaaatgctatagtcttgtcaccaacaatggactg 12321
Query: 1183 a 1183
|
Sbjct: 12322 a 12322
Score = 107 bits (54), Expect = 3e-020
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 722 ccctcgtaagttttcttgggatggaaattgaaaacaaaaactaaatctccacgttcaaag 781
|||| ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 10632 cccttgtaagttttgttgggatgaaaattgaaaacaaaaaccaaatctccacgttcaaag 10691
Query: 782 acaataacct 791
||||||||||
Sbjct: 10692 acaataacct 10701
Score = 99.6 bits (50), Expect = 8e-018
Identities = 101/118 (85%)
Strand = Plus / Plus
Query: 522 ccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaagttcg 581
|||||||||| |||||||| |||||||||||||| ||||| || ||||||||||| || |
Sbjct: 10234 ccacacaggtacggggcggggaaaggactttgaatgagttagggcggttgttgaaatttg 10293
Query: 582 tttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggccaac 639
|||| || || ||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 10294 tttctggtactcctggcattccctcgggagacgtgaagtgatccacatcatggccaac 10351
Score = 97.6 bits (49), Expect = 3e-017
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 1000 ctcatttcccataaaattcaagtagccatcacctccaagggccattgtgatgaagtgaat 1059
|||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 11982 ctcattgcccataaaatttaagtagccatcacctccaagggccatcgtaatgaagtgaat 12041
Query: 1060 catct 1064
|||||
Sbjct: 12042 catct 12046
Score = 93.7 bits (47), Expect = 5e-016
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 638 actcttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttccca 697
||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 10467 actcttccatggccaccaaagaccaaagcatcagagtccagagctactctgtacttcccg 10526
Query: 698 ggcaaatcgcatcccactttgta 720
||||| || ||||| ||||||||
Sbjct: 10527 ggcaagtcacatccgactttgta 10549
Score = 83.8 bits (42), Expect = 5e-013
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 800 tcgttcatgtcgctgacgatctgctttgacgacgaaaggaaggaaaatctctcatcgagc 859
|||||||||||||| || ||||||||||| || || |||||||||||| ||| |||||
Sbjct: 10875 tcgttcatgtcgctaacaatctgctttgatgatgacaggaaggaaaattcctcctcgagt 10934
Query: 860 gcattcatcgcttggtcaaacgcattcatgtact 893
|||||||| ||||| ||||| |||||||| ||||
Sbjct: 10935 gcattcattgcttgatcaaatgcattcatatact 10968
Score = 58.0 bits (29), Expect = 3e-005
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 2357 gcagcaggtgcccattcacgatatacagttccatcctcatttgtattaatcccaaatttc 2416
|||||||| |||||||||||||||| || || | ||| ||||||||||||||| |||
Sbjct: 14353 gcagcaggcgcccattcacgatatattgtggcaccatcaactgtattaatcccaaacttc 14412
Query: 2417 aaatagcct 2425
|||||||||
Sbjct: 14413 aaatagcct 14421
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 991 bits (500), Expect = 0.0
Identities = 800/900 (88%)
Strand = Plus / Plus
Query: 1180 ctgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagtcaaagt 1239
||||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||
Sbjct: 11717040 ctgatcatggctctcggcataggcaatgcatttttctgtatatctcctgttagtcaaagt 11717099
Query: 1240 atgcgctatttcacccatcgaccactcagagtcatctttattcttcaggtagtcaatcca 1299
||| ||||||||| ||| ||||| | ||| ||||| ||||||||||||||||||||
Sbjct: 11717100 ttgcactatttcactcattgaccatttgcggtcctctttgttcttcaggtagtcaatcca 11717159
Query: 1300 tctatcagggatagccattgccaggcgatagtcaaacccaaccccaccttcatcaactgg 1359
||||||||| || |||||||||||||| |||||||||| || |||||||||||||||||
Sbjct: 11717160 tctatcaggaatggccattgccaggcggaagtcaaaccctactccaccttcatcaactgg 11717219
Query: 1360 ccggcaaaggaccggcatgcctgaaacatcttcagcaacaacagttgcttctggcaagag 1419
||| ||||| || |||||||| ||||||||||||||||||| ||||||||| ||||||||
Sbjct: 11717220 ccgacaaagcactggcatgcccgaaacatcttcagcaacaatagttgcttccggcaagag 11717279
Query: 1420 tttgtgcattaaatggtttgcaagcatcatgtaaacaactgcatccacagctgtgtccaa 1479
||| ||||||||||||||||| |||||||||||||||| |||||||||| | || |||||
Sbjct: 11717280 tttatgcattaaatggtttgcgagcatcatgtaaacaattgcatccacatcggtatccaa 11717339
Query: 1480 actgaaatattcctggtagtttccagtaaaccccacattgataccatggtgatgatacag 1539
||||||||| |||| ||||||||||||||| ||| |||||||||||||||||| || ||
Sbjct: 11717340 actgaaatactccttgtagtttccagtaaatcccttattgataccatggtgatggtatag 11717399
Query: 1540 cattgatgtaactccatcaaatcggaagccatcaaacatgaattcatccaaccaatatct 1599
|||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 11717400 cattgatgtaaccccatcaaatcggaagccatcaaacatgaattcgtccatccaatatct 11717459
Query: 1600 caggttagaaagaagaaaccttaatacctcccagttagcatagttgaacagccgactatc 1659
|| |||||||||||||| ||||| |||||||| || |||||||||||||| ||||||||
Sbjct: 11717460 caaattagaaagaagaaatcttaagacctcccaattggcatagttgaacagacgactatc 11717519
Query: 1660 ccaaagtttatgataacctctatctcccgcatgaaaataggactcttgggtgctttgtcc 1719
||| |||||||| || || |||||||| | ||||||||| ||||| || ||| |||||||
Sbjct: 11717520 ccagagtttatggtagcccctatctcctgtatgaaaataagactcatgagtgttttgtcc 11717579
Query: 1720 aacatcatagccatttaaaccatctgtgacattattacttgcatggctatggacaacatc 1779
||| ||||||||||||| |||||| || ||||||||||| ||||||||||||||||||||
Sbjct: 11717580 aacgtcatagccatttagaccatcggtcacattattactcgcatggctatggacaacatc 11717639
Query: 1780 catcagaactcgcaaacccaaactgtgtgccttatcaacaagatatttgaggtcctctgg 1839
|||||||||||| || || ||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 11717640 catcagaactcgtaatcctaaactatgtgccttgtcaacaagatatttcagatcctctgg 11717699
Query: 1840 tgtgcctgatctgctgctaaccgcaaagaaatttgtcacatggtacccgaaagaagcata 1899
||| |||||||||||||| || || || ||||||||||| || ||||| |||||||||||
Sbjct: 11717700 tgttcctgatctgctgctgactgcgaaaaaatttgtcacgtgatacccaaaagaagcata 11717759
Query: 1900 gtacgaatgctccataactgccatcaactgaactgtgttgtagttatttgctcgtatgcg 1959
||| ||||| ||||| | |||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 11717760 gtaggaatgttccatgattgccattaactgaactgtgttgtagttatttgcccgtatgcg 11717819
Query: 1960 tggcaacacattgtctgcaaattccctatatgtgcttactgctggcttttcaccactcat 2019
||| |||||||||||||||||||| || |||||||||||| |||||| ||||||||||||
Sbjct: 11717820 tggtaacacattgtctgcaaattctctgtatgtgcttacttctggctcttcaccactcat 11717879
Query: 2020 acctacatgggcttcatagatacgtggagcagcaggctttgaaggccgaggatgcttaaa 2079
|| ||||| || |||||||| ||||||||| |||| |||| ||| ||||||||||||||
Sbjct: 11717880 ccccacatgagcctcatagatgcgtggagcatcaggttttggaggtcgaggatgcttaaa 11717939
Score = 274 bits (138), Expect = 2e-070
Identities = 233/264 (88%), Gaps = 3/264 (1%)
Strand = Plus / Plus
Query: 2085 acctttcagaagcaggaggatcccaatgaacaccatcatagggagctccaaatttagagg 2144
|||||||| | || ||||||||||| || ||||||||||| |||||||||||||||||||
Sbjct: 11718053 acctttcacaggctggaggatcccagtgtacaccatcatatggagctccaaatttagagg 11718112
Query: 2145 catcaacagtcgcataacgaatcaatgctggaatacgatcaacccatactccacc---at 2201
|||||| ||| |||||||||||| |||| |||||||||||||||||| ||||||| ||
Sbjct: 11718113 catcaaaagttgcataacgaatccatgcgggaatacgatcaacccatgctccacccccat 11718172
Query: 2202 gtagaaagcgaaatttaaccttggaattgtgagggatggcaggtttccctttgacatggt 2261
| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 11718173 gcctaaagcgaaatttaaccttggaattgtgagggatggcaggcttcccattgacatgtg 11718232
Query: 2262 caattttgatcgaccaaacaccaaatttatccttctccatcttatggtttgcaccattcc 2321
||| ||||| ||||||| ||||||||||||||||||||||| || |||||||||||||
Sbjct: 11718233 aaatcttgattgaccaaatgccaaatttatccttctccatcttgtgttttgcaccattcc 11718292
Query: 2322 agtcattgaagtcaccaataagct 2345
||| |||||| |||||||| ||||
Sbjct: 11718293 agttattgaactcaccaatgagct 11718316
Score = 155 bits (78), Expect = 2e-034
Identities = 93/98 (94%)
Strand = Plus / Plus
Query: 904 gtgatcagtgtccacaaggctccactgtcgtctgcatttatcatagctccagttgttccc 963
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 11715857 gtgatcagtgtcgacaaggctccactgacgtctgcatttatcatagctccagttgttgcc 11715916
Query: 964 ttctcttggaaagtcaatccattctgggtgaccaaact 1001
||||||||||||||||||||||||||| || |||||||
Sbjct: 11715917 ttctcttggaaagtcaatccattctggatggccaaact 11715954
Score = 153 bits (77), Expect = 6e-034
Identities = 110/121 (90%)
Strand = Plus / Plus
Query: 1063 cttttggagtgcaatccctcgatcaattgtaggtgaagcaggctgcaagtctgacatgcc 1122
||||||||||||||| || || | || ||||||||||||||||||||||||||||||||
Sbjct: 11716611 cttttggagtgcaatgccacggttgatggtaggtgaagcaggctgcaagtctgacatgcc 11716670
Query: 1123 agtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaacaatagactg 1182
||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||| |||||
Sbjct: 11716671 agtgtacatttccttgtccatcaagagaaatgctatagtcttgtcaccaacaatggactg 11716730
Query: 1183 a 1183
|
Sbjct: 11716731 a 11716731
Score = 107 bits (54), Expect = 3e-020
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 722 ccctcgtaagttttcttgggatggaaattgaaaacaaaaactaaatctccacgttcaaag 781
|||| ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 11715041 cccttgtaagttttgttgggatgaaaattgaaaacaaaaaccaaatctccacgttcaaag 11715100
Query: 782 acaataacct 791
||||||||||
Sbjct: 11715101 acaataacct 11715110
Score = 99.6 bits (50), Expect = 8e-018
Identities = 101/118 (85%)
Strand = Plus / Plus
Query: 522 ccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaagttcg 581
|||||||||| |||||||| |||||||||||||| ||||| || ||||||||||| || |
Sbjct: 11714643 ccacacaggtacggggcggggaaaggactttgaatgagttagggcggttgttgaaatttg 11714702
Query: 582 tttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggccaac 639
|||| || || ||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 11714703 tttctggtactcctggcattccctcgggagacgtgaagtgatccacatcatggccaac 11714760
Score = 97.6 bits (49), Expect = 3e-017
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 1000 ctcatttcccataaaattcaagtagccatcacctccaagggccattgtgatgaagtgaat 1059
|||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 11716391 ctcattgcccataaaatttaagtagccatcacctccaagggccatcgtaatgaagtgaat 11716450
Query: 1060 catct 1064
|||||
Sbjct: 11716451 catct 11716455
Score = 93.7 bits (47), Expect = 5e-016
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 638 actcttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttccca 697
||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 11714876 actcttccatggccaccaaagaccaaagcatcagagtccagagctactctgtacttcccg 11714935
Query: 698 ggcaaatcgcatcccactttgta 720
||||| || ||||| ||||||||
Sbjct: 11714936 ggcaagtcacatccgactttgta 11714958
Score = 83.8 bits (42), Expect = 5e-013
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 800 tcgttcatgtcgctgacgatctgctttgacgacgaaaggaaggaaaatctctcatcgagc 859
|||||||||||||| || ||||||||||| || || |||||||||||| ||| |||||
Sbjct: 11715284 tcgttcatgtcgctaacaatctgctttgatgatgacaggaaggaaaattcctcctcgagt 11715343
Query: 860 gcattcatcgcttggtcaaacgcattcatgtact 893
|||||||| ||||| ||||| |||||||| ||||
Sbjct: 11715344 gcattcattgcttgatcaaatgcattcatatact 11715377
Score = 58.0 bits (29), Expect = 3e-005
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 2357 gcagcaggtgcccattcacgatatacagttccatcctcatttgtattaatcccaaatttc 2416
|||||||| |||||||||||||||| || || | ||| ||||||||||||||| |||
Sbjct: 11718762 gcagcaggcgcccattcacgatatattgtggcaccatcaactgtattaatcccaaacttc 11718821
Query: 2417 aaatagcct 2425
|||||||||
Sbjct: 11718822 aaatagcct 11718830
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 991 bits (500), Expect = 0.0
Identities = 800/900 (88%)
Strand = Plus / Plus
Query: 1180 ctgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagtcaaagt 1239
||||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||
Sbjct: 29415777 ctgatcatggctctcggcataggcaatgcatttttctgtatatctcctgttagtcaaagt 29415836
Query: 1240 atgcgctatttcacccatcgaccactcagagtcatctttattcttcaggtagtcaatcca 1299
||| ||||||||| ||| ||||| | ||| ||||| ||||||||||||||||||||
Sbjct: 29415837 ttgcactatttcactcattgaccatttgcggtcctctttgttcttcaggtagtcaatcca 29415896
Query: 1300 tctatcagggatagccattgccaggcgatagtcaaacccaaccccaccttcatcaactgg 1359
||||||||| || |||||||||||||| |||||||||| || |||||||||||||||||
Sbjct: 29415897 tctatcaggaatggccattgccaggcggaagtcaaaccctactccaccttcatcaactgg 29415956
Query: 1360 ccggcaaaggaccggcatgcctgaaacatcttcagcaacaacagttgcttctggcaagag 1419
||| ||||| || |||||||| ||||||||||||||||||| ||||||||| ||||||||
Sbjct: 29415957 ccgacaaagcactggcatgcccgaaacatcttcagcaacaatagttgcttccggcaagag 29416016
Query: 1420 tttgtgcattaaatggtttgcaagcatcatgtaaacaactgcatccacagctgtgtccaa 1479
||| ||||||||||||||||| |||||||||||||||| |||||||||| | || |||||
Sbjct: 29416017 tttatgcattaaatggtttgcgagcatcatgtaaacaattgcatccacatcggtatccaa 29416076
Query: 1480 actgaaatattcctggtagtttccagtaaaccccacattgataccatggtgatgatacag 1539
||||||||| |||| ||||||||||||||| ||| |||||||||||||||||| || ||
Sbjct: 29416077 actgaaatactccttgtagtttccagtaaatcccttattgataccatggtgatggtatag 29416136
Query: 1540 cattgatgtaactccatcaaatcggaagccatcaaacatgaattcatccaaccaatatct 1599
|||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 29416137 cattgatgtaaccccatcaaatcggaagccatcaaacatgaattcgtccatccaatatct 29416196
Query: 1600 caggttagaaagaagaaaccttaatacctcccagttagcatagttgaacagccgactatc 1659
|| |||||||||||||| ||||| |||||||| || |||||||||||||| ||||||||
Sbjct: 29416197 caaattagaaagaagaaatcttaagacctcccaattggcatagttgaacagacgactatc 29416256
Query: 1660 ccaaagtttatgataacctctatctcccgcatgaaaataggactcttgggtgctttgtcc 1719
||| |||||||| || || |||||||| | ||||||||| ||||| || ||| |||||||
Sbjct: 29416257 ccagagtttatggtagcccctatctcctgtatgaaaataagactcatgagtgttttgtcc 29416316
Query: 1720 aacatcatagccatttaaaccatctgtgacattattacttgcatggctatggacaacatc 1779
||| ||||||||||||| |||||| || ||||||||||| ||||||||||||||||||||
Sbjct: 29416317 aacgtcatagccatttagaccatcggtcacattattactcgcatggctatggacaacatc 29416376
Query: 1780 catcagaactcgcaaacccaaactgtgtgccttatcaacaagatatttgaggtcctctgg 1839
|||||||||||| || || ||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 29416377 catcagaactcgtaatcctaaactatgtgccttgtcaacaagatatttcagatcctctgg 29416436
Query: 1840 tgtgcctgatctgctgctaaccgcaaagaaatttgtcacatggtacccgaaagaagcata 1899
||| |||||||||||||| || || || ||||||||||| || ||||| |||||||||||
Sbjct: 29416437 tgttcctgatctgctgctgactgcgaaaaaatttgtcacgtgatacccaaaagaagcata 29416496
Query: 1900 gtacgaatgctccataactgccatcaactgaactgtgttgtagttatttgctcgtatgcg 1959
||| ||||| ||||| | |||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 29416497 gtaggaatgttccatgattgccattaactgaactgtgttgtagttatttgcccgtatgcg 29416556
Query: 1960 tggcaacacattgtctgcaaattccctatatgtgcttactgctggcttttcaccactcat 2019
||| |||||||||||||||||||| || |||||||||||| |||||| ||||||||||||
Sbjct: 29416557 tggtaacacattgtctgcaaattctctgtatgtgcttacttctggctcttcaccactcat 29416616
Query: 2020 acctacatgggcttcatagatacgtggagcagcaggctttgaaggccgaggatgcttaaa 2079
|| ||||| || |||||||| ||||||||| |||| |||| ||| ||||||||||||||
Sbjct: 29416617 ccccacatgagcctcatagatgcgtggagcatcaggttttggaggtcgaggatgcttaaa 29416676
Score = 274 bits (138), Expect = 2e-070
Identities = 233/264 (88%), Gaps = 3/264 (1%)
Strand = Plus / Plus
Query: 2085 acctttcagaagcaggaggatcccaatgaacaccatcatagggagctccaaatttagagg 2144
|||||||| | || ||||||||||| || ||||||||||| |||||||||||||||||||
Sbjct: 29416790 acctttcacaggctggaggatcccagtgtacaccatcatatggagctccaaatttagagg 29416849
Query: 2145 catcaacagtcgcataacgaatcaatgctggaatacgatcaacccatactccacc---at 2201
|||||| ||| |||||||||||| |||| |||||||||||||||||| ||||||| ||
Sbjct: 29416850 catcaaaagttgcataacgaatccatgcgggaatacgatcaacccatgctccacccccat 29416909
Query: 2202 gtagaaagcgaaatttaaccttggaattgtgagggatggcaggtttccctttgacatggt 2261
| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 29416910 gcctaaagcgaaatttaaccttggaattgtgagggatggcaggcttcccattgacatgtg 29416969
Query: 2262 caattttgatcgaccaaacaccaaatttatccttctccatcttatggtttgcaccattcc 2321
||| ||||| ||||||| ||||||||||||||||||||||| || |||||||||||||
Sbjct: 29416970 aaatcttgattgaccaaatgccaaatttatccttctccatcttgtgttttgcaccattcc 29417029
Query: 2322 agtcattgaagtcaccaataagct 2345
||| |||||| |||||||| ||||
Sbjct: 29417030 agttattgaactcaccaatgagct 29417053
Score = 155 bits (78), Expect = 2e-034
Identities = 93/98 (94%)
Strand = Plus / Plus
Query: 904 gtgatcagtgtccacaaggctccactgtcgtctgcatttatcatagctccagttgttccc 963
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 29414594 gtgatcagtgtcgacaaggctccactgacgtctgcatttatcatagctccagttgttgcc 29414653
Query: 964 ttctcttggaaagtcaatccattctgggtgaccaaact 1001
||||||||||||||||||||||||||| || |||||||
Sbjct: 29414654 ttctcttggaaagtcaatccattctggatggccaaact 29414691
Score = 153 bits (77), Expect = 6e-034
Identities = 110/121 (90%)
Strand = Plus / Plus
Query: 1063 cttttggagtgcaatccctcgatcaattgtaggtgaagcaggctgcaagtctgacatgcc 1122
||||||||||||||| || || | || ||||||||||||||||||||||||||||||||
Sbjct: 29415348 cttttggagtgcaatgccacggttgatggtaggtgaagcaggctgcaagtctgacatgcc 29415407
Query: 1123 agtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaacaatagactg 1182
||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||| |||||
Sbjct: 29415408 agtgtacatttccttgtccatcaagagaaatgctatagtcttgtcaccaacaatggactg 29415467
Query: 1183 a 1183
|
Sbjct: 29415468 a 29415468
Score = 107 bits (54), Expect = 3e-020
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 722 ccctcgtaagttttcttgggatggaaattgaaaacaaaaactaaatctccacgttcaaag 781
|||| ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 29413778 cccttgtaagttttgttgggatgaaaattgaaaacaaaaaccaaatctccacgttcaaag 29413837
Query: 782 acaataacct 791
||||||||||
Sbjct: 29413838 acaataacct 29413847
Score = 99.6 bits (50), Expect = 8e-018
Identities = 101/118 (85%)
Strand = Plus / Plus
Query: 522 ccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaagttcg 581
|||||||||| |||||||| |||||||||||||| ||||| || ||||||||||| || |
Sbjct: 29413380 ccacacaggtacggggcggggaaaggactttgaatgagttagggcggttgttgaaatttg 29413439
Query: 582 tttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggccaac 639
|||| || || ||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 29413440 tttctggtactcctggcattccctcgggagacgtgaagtgatccacatcatggccaac 29413497
Score = 97.6 bits (49), Expect = 3e-017
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 1000 ctcatttcccataaaattcaagtagccatcacctccaagggccattgtgatgaagtgaat 1059
|||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 29415128 ctcattgcccataaaatttaagtagccatcacctccaagggccatcgtaatgaagtgaat 29415187
Query: 1060 catct 1064
|||||
Sbjct: 29415188 catct 29415192
Score = 93.7 bits (47), Expect = 5e-016
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 638 actcttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttccca 697
||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 29413613 actcttccatggccaccaaagaccaaagcatcagagtccagagctactctgtacttcccg 29413672
Query: 698 ggcaaatcgcatcccactttgta 720
||||| || ||||| ||||||||
Sbjct: 29413673 ggcaagtcacatccgactttgta 29413695
Score = 83.8 bits (42), Expect = 5e-013
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 800 tcgttcatgtcgctgacgatctgctttgacgacgaaaggaaggaaaatctctcatcgagc 859
|||||||||||||| || ||||||||||| || || |||||||||||| ||| |||||
Sbjct: 29414021 tcgttcatgtcgctaacaatctgctttgatgatgacaggaaggaaaattcctcctcgagt 29414080
Query: 860 gcattcatcgcttggtcaaacgcattcatgtact 893
|||||||| ||||| ||||| |||||||| ||||
Sbjct: 29414081 gcattcattgcttgatcaaatgcattcatatact 29414114
Score = 58.0 bits (29), Expect = 3e-005
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 2357 gcagcaggtgcccattcacgatatacagttccatcctcatttgtattaatcccaaatttc 2416
|||||||| |||||||||||||||| || || | ||| ||||||||||||||| |||
Sbjct: 29417499 gcagcaggcgcccattcacgatatattgtggcaccatcaactgtattaatcccaaacttc 29417558
Query: 2417 aaatagcct 2425
|||||||||
Sbjct: 29417559 aaatagcct 29417567
Score = 44.1 bits (22), Expect = 0.41
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 2748 gcggcggcggaagcggagtcggcgaggaagaggg 2781
||||||||||| | |||| |||||||||||||||
Sbjct: 9235625 gcggcggcggagggggagacggcgaggaagaggg 9235592
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 991 bits (500), Expect = 0.0
Identities = 800/900 (88%)
Strand = Plus / Plus
Query: 1180 ctgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagtcaaagt 1239
||||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||
Sbjct: 30385210 ctgatcatggctctcggcataggcaatgcatttttctgtatatctcctgttagtcaaagt 30385269
Query: 1240 atgcgctatttcacccatcgaccactcagagtcatctttattcttcaggtagtcaatcca 1299
||| ||||||||| ||| ||||| | ||| ||||| ||||||||||||||||||||
Sbjct: 30385270 ttgcactatttcactcattgaccatttgcggtcctctttgttcttcaggtagtcaatcca 30385329
Query: 1300 tctatcagggatagccattgccaggcgatagtcaaacccaaccccaccttcatcaactgg 1359
||||||||| || |||||||||||||| |||||||||| || |||||||||||||||||
Sbjct: 30385330 tctatcaggaatggccattgccaggcggaagtcaaaccctactccaccttcatcaactgg 30385389
Query: 1360 ccggcaaaggaccggcatgcctgaaacatcttcagcaacaacagttgcttctggcaagag 1419
||| ||||| || |||||||| ||||||||||||||||||| ||||||||| ||||||||
Sbjct: 30385390 ccgacaaagcactggcatgcccgaaacatcttcagcaacaatagttgcttccggcaagag 30385449
Query: 1420 tttgtgcattaaatggtttgcaagcatcatgtaaacaactgcatccacagctgtgtccaa 1479
||| ||||||||||||||||| |||||||||||||||| |||||||||| | || |||||
Sbjct: 30385450 tttatgcattaaatggtttgcgagcatcatgtaaacaattgcatccacatcggtatccaa 30385509
Query: 1480 actgaaatattcctggtagtttccagtaaaccccacattgataccatggtgatgatacag 1539
||||||||| |||| ||||||||||||||| ||| |||||||||||||||||| || ||
Sbjct: 30385510 actgaaatactccttgtagtttccagtaaatcccttattgataccatggtgatggtatag 30385569
Query: 1540 cattgatgtaactccatcaaatcggaagccatcaaacatgaattcatccaaccaatatct 1599
|||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 30385570 cattgatgtaaccccatcaaatcggaagccatcaaacatgaattcgtccatccaatatct 30385629
Query: 1600 caggttagaaagaagaaaccttaatacctcccagttagcatagttgaacagccgactatc 1659
|| |||||||||||||| ||||| |||||||| || |||||||||||||| ||||||||
Sbjct: 30385630 caaattagaaagaagaaatcttaagacctcccaattggcatagttgaacagacgactatc 30385689
Query: 1660 ccaaagtttatgataacctctatctcccgcatgaaaataggactcttgggtgctttgtcc 1719
||| |||||||| || || |||||||| | ||||||||| ||||| || ||| |||||||
Sbjct: 30385690 ccagagtttatggtagcccctatctcctgtatgaaaataagactcatgagtgttttgtcc 30385749
Query: 1720 aacatcatagccatttaaaccatctgtgacattattacttgcatggctatggacaacatc 1779
||| ||||||||||||| |||||| || ||||||||||| ||||||||||||||||||||
Sbjct: 30385750 aacgtcatagccatttagaccatcggtcacattattactcgcatggctatggacaacatc 30385809
Query: 1780 catcagaactcgcaaacccaaactgtgtgccttatcaacaagatatttgaggtcctctgg 1839
|||||||||||| || || ||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 30385810 catcagaactcgtaatcctaaactatgtgccttgtcaacaagatatttcagatcctctgg 30385869
Query: 1840 tgtgcctgatctgctgctaaccgcaaagaaatttgtcacatggtacccgaaagaagcata 1899
||| |||||||||||||| || || || ||||||||||| || ||||| |||||||||||
Sbjct: 30385870 tgttcctgatctgctgctgactgcgaaaaaatttgtcacgtgatacccaaaagaagcata 30385929
Query: 1900 gtacgaatgctccataactgccatcaactgaactgtgttgtagttatttgctcgtatgcg 1959
||| ||||| ||||| | |||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 30385930 gtaggaatgttccatgattgccattaactgaactgtgttgtagttatttgcccgtatgcg 30385989
Query: 1960 tggcaacacattgtctgcaaattccctatatgtgcttactgctggcttttcaccactcat 2019
||| |||||||||||||||||||| || |||||||||||| |||||| ||||||||||||
Sbjct: 30385990 tggtaacacattgtctgcaaattctctgtatgtgcttacttctggctcttcaccactcat 30386049
Query: 2020 acctacatgggcttcatagatacgtggagcagcaggctttgaaggccgaggatgcttaaa 2079
|| ||||| || |||||||| ||||||||| |||| |||| ||| ||||||||||||||
Sbjct: 30386050 ccccacatgagcctcatagatgcgtggagcatcaggttttggaggtcgaggatgcttaaa 30386109
Score = 274 bits (138), Expect = 2e-070
Identities = 233/264 (88%), Gaps = 3/264 (1%)
Strand = Plus / Plus
Query: 2085 acctttcagaagcaggaggatcccaatgaacaccatcatagggagctccaaatttagagg 2144
|||||||| | || ||||||||||| || ||||||||||| |||||||||||||||||||
Sbjct: 30386223 acctttcacaggctggaggatcccagtgtacaccatcatatggagctccaaatttagagg 30386282
Query: 2145 catcaacagtcgcataacgaatcaatgctggaatacgatcaacccatactccacc---at 2201
|||||| ||| |||||||||||| |||| |||||||||||||||||| ||||||| ||
Sbjct: 30386283 catcaaaagttgcataacgaatccatgcgggaatacgatcaacccatgctccacccccat 30386342
Query: 2202 gtagaaagcgaaatttaaccttggaattgtgagggatggcaggtttccctttgacatggt 2261
| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 30386343 gcctaaagcgaaatttaaccttggaattgtgagggatggcaggcttcccattgacatgtg 30386402
Query: 2262 caattttgatcgaccaaacaccaaatttatccttctccatcttatggtttgcaccattcc 2321
||| ||||| ||||||| ||||||||||||||||||||||| || |||||||||||||
Sbjct: 30386403 aaatcttgattgaccaaatgccaaatttatccttctccatcttgtgttttgcaccattcc 30386462
Query: 2322 agtcattgaagtcaccaataagct 2345
||| |||||| |||||||| ||||
Sbjct: 30386463 agttattgaactcaccaatgagct 30386486
Score = 155 bits (78), Expect = 2e-034
Identities = 93/98 (94%)
Strand = Plus / Plus
Query: 904 gtgatcagtgtccacaaggctccactgtcgtctgcatttatcatagctccagttgttccc 963
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 30384027 gtgatcagtgtcgacaaggctccactgacgtctgcatttatcatagctccagttgttgcc 30384086
Query: 964 ttctcttggaaagtcaatccattctgggtgaccaaact 1001
||||||||||||||||||||||||||| || |||||||
Sbjct: 30384087 ttctcttggaaagtcaatccattctggatggccaaact 30384124
Score = 153 bits (77), Expect = 6e-034
Identities = 110/121 (90%)
Strand = Plus / Plus
Query: 1063 cttttggagtgcaatccctcgatcaattgtaggtgaagcaggctgcaagtctgacatgcc 1122
||||||||||||||| || || | || ||||||||||||||||||||||||||||||||
Sbjct: 30384781 cttttggagtgcaatgccacggttgatggtaggtgaagcaggctgcaagtctgacatgcc 30384840
Query: 1123 agtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaacaatagactg 1182
||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||| |||||
Sbjct: 30384841 agtgtacatttccttgtccatcaagagaaatgctatagtcttgtcaccaacaatggactg 30384900
Query: 1183 a 1183
|
Sbjct: 30384901 a 30384901
Score = 107 bits (54), Expect = 3e-020
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 722 ccctcgtaagttttcttgggatggaaattgaaaacaaaaactaaatctccacgttcaaag 781
|||| ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 30383211 cccttgtaagttttgttgggatgaaaattgaaaacaaaaaccaaatctccacgttcaaag 30383270
Query: 782 acaataacct 791
||||||||||
Sbjct: 30383271 acaataacct 30383280
Score = 99.6 bits (50), Expect = 8e-018
Identities = 101/118 (85%)
Strand = Plus / Plus
Query: 522 ccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaagttcg 581
|||||||||| |||||||| |||||||||||||| ||||| || ||||||||||| || |
Sbjct: 30382813 ccacacaggtacggggcggggaaaggactttgaatgagttagggcggttgttgaaatttg 30382872
Query: 582 tttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggccaac 639
|||| || || ||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 30382873 tttctggtactcctggcattccctcgggagacgtgaagtgatccacatcatggccaac 30382930
Score = 97.6 bits (49), Expect = 3e-017
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 1000 ctcatttcccataaaattcaagtagccatcacctccaagggccattgtgatgaagtgaat 1059
|||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 30384561 ctcattgcccataaaatttaagtagccatcacctccaagggccatcgtaatgaagtgaat 30384620
Query: 1060 catct 1064
|||||
Sbjct: 30384621 catct 30384625
Score = 93.7 bits (47), Expect = 5e-016
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 638 actcttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttccca 697
||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 30383046 actcttccatggccaccaaagaccaaagcatcagagtccagagctactctgtacttcccg 30383105
Query: 698 ggcaaatcgcatcccactttgta 720
||||| || ||||| ||||||||
Sbjct: 30383106 ggcaagtcacatccgactttgta 30383128
Score = 83.8 bits (42), Expect = 5e-013
Identities = 81/94 (86%)
Strand = Plus / Plus
Query: 800 tcgttcatgtcgctgacgatctgctttgacgacgaaaggaaggaaaatctctcatcgagc 859
|||||||||||||| || ||||||||||| || || |||||||||||| ||| |||||
Sbjct: 30383454 tcgttcatgtcgctaacaatctgctttgatgatgacaggaaggaaaattcctcctcgagt 30383513
Query: 860 gcattcatcgcttggtcaaacgcattcatgtact 893
|||||||| ||||| ||||| |||||||| ||||
Sbjct: 30383514 gcattcattgcttgatcaaatgcattcatatact 30383547
Score = 58.0 bits (29), Expect = 3e-005
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 2357 gcagcaggtgcccattcacgatatacagttccatcctcatttgtattaatcccaaatttc 2416
|||||||| |||||||||||||||| || || | ||| ||||||||||||||| |||
Sbjct: 30386932 gcagcaggcgcccattcacgatatattgtggcaccatcaactgtattaatcccaaacttc 30386991
Query: 2417 aaatagcct 2425
|||||||||
Sbjct: 30386992 aaatagcct 30387000
Score = 44.1 bits (22), Expect = 0.41
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 2748 gcggcggcggaagcggagtcggcgaggaagaggg 2781
||||||||||| | |||| |||||||||||||||
Sbjct: 9207515 gcggcggcggagggggagacggcgaggaagaggg 9207482
>dbj|D10838.1|RICSBE1 Oryza sativa (japonica cultivar-group) gene for starch branching
enzyme
Length = 11700
Score = 991 bits (500), Expect = 0.0
Identities = 800/900 (88%)
Strand = Plus / Minus
Query: 1180 ctgatcatggctctcagcatatgcgatgcatttttcagtatatctcctgttagtcaaagt 1239
||||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||
Sbjct: 7932 ctgatcatggctctcggcataggcaatgcatttttctgtatatctcctgttagtcaaagt 7873
Query: 1240 atgcgctatttcacccatcgaccactcagagtcatctttattcttcaggtagtcaatcca 1299
||| ||||||||| ||| ||||| | ||| ||||| ||||||||||||||||||||
Sbjct: 7872 ttgcactatttcactcattgaccatttgcggtcctctttgttcttcaggtagtcaatcca 7813
Query: 1300 tctatcagggatagccattgccaggcgatagtcaaacccaaccccaccttcatcaactgg 1359
||||||||| || |||||||||||||| |||||||||| || |||||||||||||||||
Sbjct: 7812 tctatcaggaatggccattgccaggcggaagtcaaaccctactccaccttcatcaactgg 7753
Query: 1360 ccggcaaaggaccggcatgcctgaaacatcttcagcaacaacagttgcttctggcaagag 1419
||| ||||| || |||||||| ||||||||||||||||||| ||||||||| ||||||||
Sbjct: 7752 ccgacaaagcactggcatgcccgaaacatcttcagcaacaatagttgcttccggcaagag 7693
Query: 1420 tttgtgcattaaatggtttgcaagcatcatgtaaacaactgcatccacagctgtgtccaa 1479
||| ||||||||||||||||| |||||||||||||||| |||||||||| | || |||||
Sbjct: 7692 tttatgcattaaatggtttgcgagcatcatgtaaacaattgcatccacatcggtatccaa 7633
Query: 1480 actgaaatattcctggtagtttccagtaaaccccacattgataccatggtgatgatacag 1539
||||||||| |||| ||||||||||||||| ||| |||||||||||||||||| || ||
Sbjct: 7632 actgaaatactccttgtagtttccagtaaatcccttattgataccatggtgatggtatag 7573
Query: 1540 cattgatgtaactccatcaaatcggaagccatcaaacatgaattcatccaaccaatatct 1599
|||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 7572 cattgatgtaaccccatcaaatcggaagccatcaaacatgaattcgtccatccaatatct 7513
Query: 1600 caggttagaaagaagaaaccttaatacctcccagttagcatagttgaacagccgactatc 1659
|| |||||||||||||| ||||| |||||||| || |||||||||||||| ||||||||
Sbjct: 7512 caaattagaaagaagaaatcttaagacctcccaattggcatagttgaacagacgactatc 7453
Query: 1660 ccaaagtttatgataacctctatctcccgcatgaaaataggactcttgggtgctttgtcc 1719
||| |||||||| || || |||||||| | ||||||||| ||||| || ||| |||||||
Sbjct: 7452 ccagagtttatggtagcccctatctcctgtatgaaaataagactcatgagtgttttgtcc 7393
Query: 1720 aacatcatagccatttaaaccatctgtgacattattacttgcatggctatggacaacatc 1779
||| ||||||||||||| |||||| || ||||||||||| ||||||||||||||||||||
Sbjct: 7392 aacgtcatagccatttagaccatcggtcacattattactcgcatggctatggacaacatc 7333
Query: 1780 catcagaactcgcaaacccaaactgtgtgccttatcaacaagatatttgaggtcctctgg 1839
|||||||||||| || || ||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 7332 catcagaactcgtaatcctaaactatgtgccttgtcaacaagatatttcagatcctctgg 7273
Query: 1840 tgtgcctgatctgctgctaaccgcaaagaaatttgtcacatggtacccgaaagaagcata 1899
||| |||||||||||||| || || || ||||||||||| || ||||| |||||||||||
Sbjct: 7272 tgttcctgatctgctgctgactgcgaaaaaatttgtcacgtgatacccaaaagaagcata 7213
Query: 1900 gtacgaatgctccataactgccatcaactgaactgtgttgtagttatttgctcgtatgcg 1959
||| ||||| ||||| | |||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 7212 gtaggaatgttccatgattgccattaactgaactgtgttgtagttatttgcccgtatgcg 7153
Query: 1960 tggcaacacattgtctgcaaattccctatatgtgcttactgctggcttttcaccactcat 2019
||| |||||||||||||||||||| || |||||||||||| |||||| ||||||||||||
Sbjct: 7152 tggtaacacattgtctgcaaattctctgtatgtgcttacttctggctcttcaccactcat 7093
Query: 2020 acctacatgggcttcatagatacgtggagcagcaggctttgaaggccgaggatgcttaaa 2079
|| ||||| || |||||||| ||||||||| |||| |||| ||| ||||||||||||||
Sbjct: 7092 ccccacatgagcctcatagatgcgtggagcatcaggttttggaggtcgaggatgcttaaa 7033
Score = 274 bits (138), Expect = 2e-070
Identities = 233/264 (88%), Gaps = 3/264 (1%)
Strand = Plus / Minus
Query: 2085 acctttcagaagcaggaggatcccaatgaacaccatcatagggagctccaaatttagagg 2144
|||||||| | || ||||||||||| || ||||||||||| |||||||||||||||||||
Sbjct: 6919 acctttcacaggctggaggatcccagtgtacaccatcatatggagctccaaatttagagg 6860
Query: 2145 catcaacagtcgcataacgaatcaatgctggaatacgatcaacccatactccacc---at 2201
|||||| ||| |||||||||||| |||| |||||||||||||||||| ||||||| ||
Sbjct: 6859 catcaaaagttgcataacgaatccatgcgggaatacgatcaacccatgctccacccccat 6800
Query: 2202 gtagaaagcgaaatttaaccttggaattgtgagggatggcaggtttccctttgacatggt 2261
| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 6799 gcctaaagcgaaatttaaccttggaattgtgagggatggcaggcttcccattgacatgtg 6740
Query: 2262 caattttgatcgaccaaacaccaaatttatccttctccatcttatggtttgcaccattcc 2321
||| ||||| ||||||| ||||||||||||||||||||||| || |||||||||||||
Sbjct: 6739 aaatcttgattgaccaaatgccaaatttatccttctccatcttgtgttttgcaccattcc 6680
Query: 2322 agtcattgaagtcaccaataagct 2345
||| |||||| |||||||| ||||
Sbjct: 6679 agttattgaactcaccaatgagct 6656
Score = 155 bits (78), Expect = 2e-034
Identities = 93/98 (94%)
Strand = Plus / Minus
Query: 904 gtgatcagtgtccacaaggctccactgtcgtctgcatttatcatagctccagttgttccc 963
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 9114 gtgatcagtgtcgacaaggctccactgacgtctgcatttatcatagctccagttgttgcc 9055
Query: 964 ttctcttggaaagtcaatccattctgggtgaccaaact 1001
||||||||||||||||||||||||||| || |||||||
Sbjct: 9054 ttctcttggaaagtcaatccattctggatggccaaact 9017
Score = 153 bits (77), Expect = 6e-034
Identities = 110/121 (90%)
Strand = Plus / Minus
Query: 1063 cttttggagtgcaatccctcgatcaattgtaggtgaagcaggctgcaagtctgacatgcc 1122
||||||||||||||| || || | || ||||||||||||||||||||||||||||||||
Sbjct: 8361 cttttggagtgcaatgccacggttgatggtaggtgaagcaggctgcaagtctgacatgcc 8302
Query: 1123 agtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaacaatagactg 1182
||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||| |||||
Sbjct: 8301 agtgtacatttccttgtccatcaagagaaatgctatagtcttgtcaccaacaatggactg 8242
Query: 1183 a 1183
|
Sbjct: 8241 a 8241
Score = 107 bits (54), Expect = 3e-020
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 722 ccctcgtaagttttcttgggatggaaattgaaaacaaaaactaaatctccacgttcaaag 781
|||| ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 9929 cccttgtaagttttgttgggatgaaaattgaaaacaaaaaccaaatctccacgttcaaag 9870
Query: 782 acaataacct 791
||||||||||
Sbjct: 9869 acaataacct 9860
Score = 99.6 bits (50), Expect = 8e-018
Identities = 101/118 (85%)
Strand = Plus / Minus
Query: 522 ccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaagttcg 581
|||||||||| |||||||| |||||||||||||| ||||| || ||||||||||| || |
Sbjct: 10327 ccacacaggtacggggcggggaaaggactttgaatgagttagggcggttgttgaaatttg 10268
Query: 582 tttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggccaac 639
|||| || || ||||||| || || || ||||||||||||||||| || ||||||||
Sbjct: 10267 tttctggtactcctggcattccctcgggagacgtgaagtgatccacatcatggccaac 10210
Score = 97.6 bits (49), Expect = 3e-017
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 1000 ctcatttcccataaaattcaagtagccatcacctccaagggccattgtgatgaagtgaat 1059
|||||| ||||||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 8581 ctcattgcccataaaatttaagtagccatcacctccaagggccatcgtaatgaagtgaat 8522
Query: 1060 catct 1064
|||||
Sbjct: 8521 catct 8517
Score = 93.7 bits (47), Expect = 5e-016
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 638 actcttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttccca 697
||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 10094 actcttccatggccaccaaagaccaaagcatcagagtccagagctactctgtacttcccg 10035
Query: 698 ggcaaatcgcatcccactttgta 720
||||| || ||||| ||||||||
Sbjct: 10034 ggcaagtcacatccgactttgta 10012
Score = 83.8 bits (42), Expect = 5e-013
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 800 tcgttcatgtcgctgacgatctgctttgacgacgaaaggaaggaaaatctctcatcgagc 859
|||||||||||||| || ||||||||||| || || |||||||||||| ||| |||||
Sbjct: 9686 tcgttcatgtcgctaacaatctgctttgatgatgacaggaaggaaaattcctcctcgagt 9627
Query: 860 gcattcatcgcttggtcaaacgcattcatgtact 893
|||||||| ||||| ||||| |||||||| ||||
Sbjct: 9626 gcattcattgcttgatcaaatgcattcatatact 9593
Score = 58.0 bits (29), Expect = 3e-005
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 2357 gcagcaggtgcccattcacgatatacagttccatcctcatttgtattaatcccaaatttc 2416
|||||||| |||||||||||||||| || || | ||| ||||||||||||||| |||
Sbjct: 6210 gcagcaggcgcccattcacgatatattgtggcaccatcaactgtattaatcccaaacttc 6151
Query: 2417 aaatagcct 2425
|||||||||
Sbjct: 6150 aaatagcct 6142
>gb|CB668587.1|CB668587 OSJNEd16I04.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd16I04 3', mRNA sequence
Length = 862
Score = 967 bits (488), Expect = 0.0
Identities = 733/815 (89%)
Strand = Plus / Plus
Query: 854 tcgagcgcattcatcgcttggtcaaacgcattcatgtacttgtaccgcaagtgatcagtg 913
||||| |||||||||||||| ||||| |||||||| |||||||| || | |||||| ||
Sbjct: 27 tcgagtgcattcatcgcttgatcaaatgcattcatatacttgtatcgaaggtgatccttg 86
Query: 914 tccacaaggctccactgtcgtctgcatttatcatagctccagttgttcccttctcttgga 973
| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 87 acaacaaggctccactgacgtctgcatttatcatagctccagttgttgccttctcttgga 146
Query: 974 aagtcaatccattctgggtgaccaaactcatttcccataaaattcaagtagccatcacct 1033
||||||||||||||||| || ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 147 aagtcaatccattctggatggccaaactcattgcccataaaatttaagtagccatcacct 206
Query: 1034 ccaagggccattgtgatgaagtgaatcatcttttggagtgcaatccctcgatcaattgta 1093
||||||||||| || ||||||||||||||||||||||||||||| || || | || |||
Sbjct: 207 ccaagggccatcgtaatgaagtgaatcatcttttggagtgcaatgccacggttgatggta 266
Query: 1094 ggtgaagcaggctgcaagtctgacatgccagtgtacatttccttgtccatcaggagaaat 1153
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 267 ggtgaagcaggctgcaagtctgacatgccagtgtacatttccttgtccatcaagagaaat 326
Query: 1154 gcaatagttttgtcgccaacaatagactgatcatggctctcagcatatgcgatgcatttt 1213
|| ||||| ||||| |||||||| ||||||||||||||||| ||||| || |||||||||
Sbjct: 327 gctatagtcttgtcaccaacaatggactgatcatggctctcggcataggcaatgcatttt 386
Query: 1214 tcagtatatctcctgttagtcaaagtatgcgctatttcacccatcgaccactcagagtca 1273
|| ||||||||||||||||||||||| ||| ||||||||| ||| ||||| | |||
Sbjct: 387 tctgtatatctcctgttagtcaaagtttgcactatttcactcattgaccatttgcggtcc 446
Query: 1274 tctttattcttcaggtagtcaatccatctatcagggatagccattgccaggcgatagtca 1333
||||| ||||||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 447 tctttgttcttcaggtagtcaatccatctatcaggaatggccattgccaggcggaagtca 506
Query: 1334 aacccaaccccaccttcatcaactggccggcaaaggaccggcatgcctgaaacatcttca 1393
||||| || |||||||||||||||||||| ||||| || |||||||| ||||||||||||
Sbjct: 507 aaccctactccaccttcatcaactggccgacaaagcactggcatgcccgaaacatcttca 566
Query: 1394 gcaacaacagttgcttctggcaagagtttgtgcattaaatggtttgcaagcatcatgtaa 1453
||||||| ||||||||| ||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 567 gcaacaatagttgcttccggcaagagtttatgcattaaatggtttgcgagcatcatgtaa 626
Query: 1454 acaactgcatccacagctgtgtccaaactgaaatattcctggtagtttccagtaaacccc 1513
|||| |||||||||| | || |||||||||||||| |||| ||||||||||||||| |||
Sbjct: 627 acaattgcatccacatcggtatccaaactgaaatactccttgtagtttccagtaaatccc 686
Query: 1514 acattgataccatggtgatgatacagcattgatgtaactccatcaaatcggaagccatca 1573
|||||||||||||||||| || |||||||||||||| |||||| ||||||||||||||
Sbjct: 687 ttattgataccatggtgatggtatagcattgatgtaaccccatcanatcggaagccatca 746
Query: 1574 aacatgaattcatccaaccaatatctcaggttagaaagaagaaaccttaatacctcccag 1633
||||||||||| |||| ||||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 747 aacatgaattcgtccatccaatatctcaaattagaaagaagaaatcttaagacctcccaa 806
Query: 1634 ttagcatagttgaacagccgactatcccaaagttt 1668
|| |||||||||||||| ||||||||||| |||||
Sbjct: 807 ttggcatagttgaacagacgactatcccagagttt 841
>gb|CB668586.1|CB668586 OSJNEd16I04.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd16I04 5', mRNA sequence
Length = 810
Score = 957 bits (483), Expect = 0.0
Identities = 714/791 (90%)
Strand = Plus / Minus
Query: 860 gcattcatcgcttggtcaaacgcattcatgtacttgtaccgcaagtgatcagtgtccaca 919
|||||||| ||||| ||||| |||||||| |||| ||| || | |||||||||||| |||
Sbjct: 809 gcattcattgcttgatcaaatgcattcatatactggtatcgaaggtgatcagtgtcgaca 750
Query: 920 aggctccactgtcgtctgcatttatcatagctccagttgttcccttctcttggaaagtca 979
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 749 aggctccactgacgtctgcatttatcatagctccagttgttgccttctcttggaaagtca 690
Query: 980 atccattctgggtgaccaaactcatttcccataaaattcaagtagccatcacctccaagg 1039
||||||||||| || ||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 689 atccattctggatggccaaactcattgcccataaaatttaagtagccatcacctccaagg 630
Query: 1040 gccattgtgatgaagtgaatcatcttttggagtgcaatccctcgatcaattgtaggtgaa 1099
||||| || ||||||||||||||||||||||||||||| || || | || |||||||||
Sbjct: 629 gccatcgtaatgaagtgaatcatcttttggagtgcaatgccacggttgatggtaggtgaa 570
Query: 1100 gcaggctgcaagtctgacatgccagtgtacatttccttgtccatcaggagaaatgcaata 1159
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 569 gcaggctgcaagtctgacatgccagtgtacatttccttgtccatcaagagaaatgctata 510
Query: 1160 gttttgtcgccaacaatagactgatcatggctctcagcatatgcgatgcatttttcagta 1219
|| ||||| |||||||| ||||||||||||||||| ||||| || ||||||||||| |||
Sbjct: 509 gtcttgtcaccaacaatggactgatcatggctctcggcataggcaatgcatttttctgta 450
Query: 1220 tatctcctgttagtcaaagtatgcgctatttcacccatcgaccactcagagtcatcttta 1279
|||||||||||||||||||| ||| ||||||||| ||| ||||| | ||| |||||
Sbjct: 449 tatctcctgttagtcaaagtttgcactatttcactcattgaccatttgcggtcctctttg 390
Query: 1280 ttcttcaggtagtcaatccatctatcagggatagccattgccaggcgatagtcaaaccca 1339
||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||
Sbjct: 389 ttcttcaggtagtcaatccatctatcaggaatggccattgccaggcggaagtcaaaccct 330
Query: 1340 accccaccttcatcaactggccggcaaaggaccggcatgcctgaaacatcttcagcaaca 1399
|| |||||||||||||||||||| ||||| || |||||||| ||||||||||||||||||
Sbjct: 329 actccaccttcatcaactggccgacaaagcactggcatgcccgaaacatcttcagcaaca 270
Query: 1400 acagttgcttctggcaagagtttgtgcattaaatggtttgcaagcatcatgtaaacaact 1459
| ||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||| |
Sbjct: 269 atagttgcttccggcaagagtttatgcattaaatggtttgcgagcatcatgtaaacaatt 210
Query: 1460 gcatccacagctgtgtccaaactgaaatattcctggtagtttccagtaaaccccacattg 1519
||||||||| | || |||||||||||||| |||| ||||||||||||||| ||| ||||
Sbjct: 209 gcatccacatcggtatccaaactgaaatactccttgtagtttccagtaaatcccttattg 150
Query: 1520 ataccatggtgatgatacagcattgatgtaactccatcaaatcggaagccatcaaacatg 1579
|||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 149 ataccatggtgatggtatagcattgatgtaaccccatcaaatcggaagccatcaaacatg 90
Query: 1580 aattcatccaaccaatatctcaggttagaaagaagaaaccttaatacctcccagttagca 1639
||||| |||| ||||||||||| |||||||||||||| ||||| |||||||| || |||
Sbjct: 89 aattcgtccatccaatatctcaaattagaaagaagaaatcttaagacctcccaattggca 30
Query: 1640 tagttgaacag 1650
|||||||||||
Sbjct: 29 tagttgaacag 19
>gb|CA999006.1|CA999006 S234M_A09 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 686
Score = 765 bits (386), Expect = 0.0
Identities = 611/686 (89%)
Strand = Plus / Minus
Query: 1142 atcaggagaaatgcaatagttttgtcgccaacaatagactgatcatggctctcagcatat 1201
|||| ||||||||| ||||| ||||| |||||||| ||||||||||||||||| |||||
Sbjct: 686 atcaagagaaatgctatagtcttgtcaccaacaatggactgatcatggctctcggcatag 627
Query: 1202 gcgatgcatttttcagtatatctcctgttagtcaaagtatgcgctatttcacccatcgac 1261
|| ||||||||||| ||||||||||||||||||||||| ||| ||||||||| ||| |||
Sbjct: 626 gcaatgcatttttctgtatatctcctgttagtcaaagtttgcactatttcactcattgac 567
Query: 1262 cactcagagtcatctttattcttcaggtagtcaatccatctatcagggatagccattgcc 1321
|| | ||| ||||| ||||||||||||||||||||||||||||| || |||||||||
Sbjct: 566 catttgcggtcctctttgttcttcaggtagtcaatccatctatcaggaatggccattgcc 507
Query: 1322 aggcgatagtcaaacccaaccccaccttcatcaactggccggcaaaggaccggcatgcct 1381
||||| |||||||||| || |||||||||||||||||||| ||||| || ||||||||
Sbjct: 506 aggcggaagtcaaaccctactccaccttcatcaactggccgacaaagcactggcatgccc 447
Query: 1382 gaaacatcttcagcaacaacagttgcttctggcaagagtttgtgcattaaatggtttgca 1441
||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||
Sbjct: 446 gaaacatcttcagcaacaatagttgcttccggcaagagtttatgcattaaatggtttgcg 387
Query: 1442 agcatcatgtaaacaactgcatccacagctgtgtccaaactgaaatattcctggtagttt 1501
|||||||||||||||| |||||||||| | || |||||||||||||| |||| |||||||
Sbjct: 386 agcatcatgtaaacaattgcatccacatcggtatccaaactgaaatactccttgtagttt 327
Query: 1502 ccagtaaaccccacattgataccatggtgatgatacagcattgatgtaactccatcaaat 1561
|||||||| ||| |||||||||||||||||| || |||||||||||||| |||||||||
Sbjct: 326 ccagtaaatcccttattgataccatggtgatggtatagcattgatgtaaccccatcaaat 267
Query: 1562 cggaagccatcaaacatgaattcatccaaccaatatctcaggttagaaagaagaaacctt 1621
||||||||||||||||||||||| |||| ||||||||||| |||||||||||||| |||
Sbjct: 266 cggaagccatcaaacatgaattcgtccatccaatatctcaaattagaaagaagaaatctt 207
Query: 1622 aatacctcccagttagcatagttgaacagccgactatcccaaagtttatgataacctcta 1681
|| |||||||| || |||||||||||||| ||||||||||| |||||||| || || |||
Sbjct: 206 aagacctcccaattggcatagttgaacagacgactatcccagagtttatggtagccccta 147
Query: 1682 tctcccgcatgaaaataggactcttgggtgctttgtccaacatcatagccatttaaacca 1741
||||| | ||||||||| ||||| || ||| |||||||||| ||||||||||||| ||||
Sbjct: 146 tctcctgtatgaaaataagactcatgagtgttttgtccaacgtcatagccatttagacca 87
Query: 1742 tctgtgacattattacttgcatggctatggacaacatccatcagaactcgcaaacccaaa 1801
|| || ||||||||||| |||||||||||||||||||||||||||||||| || || |||
Sbjct: 86 tcggtcacattattactcgcatggctatggacaacatccatcagaactcgtaatcctaaa 27
Query: 1802 ctgtgtgccttatcaacaagatattt 1827
|| |||||||| ||||||||||||||
Sbjct: 26 ctatgtgccttgtcaacaagatattt 1
>gb|C99341.1|C99341 C99341 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10727_7A, mRNA sequence
Length = 582
Score = 694 bits (350), Expect = 0.0
Identities = 521/578 (90%)
Strand = Plus / Minus
Query: 637 aactcttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttccc 696
|||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 582 aactcttccatggccaccaaagaccaaagcatcagagtccagagctactctgtacttccc 523
Query: 697 aggcaaatcgcatcccactttgtagccctcgtaagttttcttgggatggaaattgaaaac 756
||||| || ||||| |||||||| |||| ||||||||| |||||||| |||||||||||
Sbjct: 522 gggcaagtcacatccgactttgtaacccttgtaagttttgttgggatgaaaattgaaaac 463
Query: 757 aaaaactaaatctccacgttcaaagacaataaccttttcctcatcgttcatgtcgctgac 816
|||||| ||||||||||||||||||||||||||||| || | |||||||||||||| ||
Sbjct: 462 aaaaaccaaatctccacgttcaaagacaataaccttatctttctcgttcatgtcgctaac 403
Query: 817 gatctgctttgacgacgaaaggaaggaaaatctctcatcgagcgcattcatcgcttggtc 876
||||||||||| || || |||||||||||| ||| ||||| |||||||| ||||| ||
Sbjct: 402 aatctgctttgatgatgacaggaaggaaaattcctcctcgagtgcattcattgcttgatc 343
Query: 877 aaacgcattcatgtacttgtaccgcaagtgatcagtgtccacaaggctccactgtcgtct 936
||| |||||||| |||||||| || | |||||||||||| |||||||||||||| |||||
Sbjct: 342 aaatgcattcatatacttgtatcgaaggtgatcagtgtcgacaaggctccactgacgtct 283
Query: 937 gcatttatcatagctccagttgttcccttctcttggaaagtcaatccattctgggtgacc 996
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||
Sbjct: 282 gcatttatcatagctccagttgttgccttctcttggaaagtcaatccattctggatggcc 223
Query: 997 aaactcatttcccataaaattcaagtagccatcacctccaagggccattgtgatgaagtg 1056
||||||||| ||||||||||| |||||||||||||||||||||||||| || ||||||||
Sbjct: 222 aaactcattgcccataaaatttaagtagccatcacctccaagggccatcgtaatgaagtg 163
Query: 1057 aatcatcttttggagtgcaatccctcgatcaattgtaggtgaagcaggctgcaagtctga 1116
||||||||||||||||||||| || || | || ||||||||||||||||||||||||||
Sbjct: 162 aatcatcttttggagtgcaatgccacggttgatggtaggtgaagcaggctgcaagtctga 103
Query: 1117 catgccagtgtacatttccttgtccatcaggagaaatgcaatagttttgtcgccaacaat 1176
||||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||||||
Sbjct: 102 catgccagtgtacatttccttgtccatcaagagaaatgctatagtcttgtcaccaacaat 43
Query: 1177 agactgatcatggctctcagcatatgcgatgcattttt 1214
||||||||||||||||| ||||| || ||||||||||
Sbjct: 42 ggactgatcatggctctcggcataggcaatgcattttt 5
>gb|CF330102.1|CF330102 NACL--05-K23.b1 Rice callus plasmid cDNA library (NACL) Oryza sativa
(japonica cultivar-group) cDNA clone NACL--05-K23, mRNA
sequence
Length = 596
Score = 684 bits (345), Expect = 0.0
Identities = 531/593 (89%)
Strand = Plus / Minus
Query: 770 ccacgttcaaagacaataaccttttcctcatcgttcatgtcgctgacgatctgctttgac 829
||||||||||||||||||||||| || | ||||||||||||||| || |||||||||||
Sbjct: 596 ccacgttcaaagacaataaccttatctttatcgttcatgtcgctaacaatctgctttgat 537
Query: 830 gacgaaaggaaggaaaatctctcatcgagcgcattcatcgcttggtcaaacgcattcatg 889
|| || |||||||||||| ||| ||||| |||||||| ||||| ||||| ||||||||
Sbjct: 536 gatgacaggaaggaaaattcctcctcgagtgcattcattgcttgatcaaatgcattcata 477
Query: 890 tacttgtaccgcaagtgatcagtgtccacaaggctccactgtcgtctgcatttatcatag 949
|||||||| || | |||||||||||| |||||||||||||| |||| |||||||||||||
Sbjct: 476 tacttgtatcgaaggtgatcagtgtcgacaaggctccactgacgtccgcatttatcatag 417
Query: 950 ctccagttgttcccttctcttggaaagtcaatccattctgggtgaccaaactcatttccc 1009
||||||||||| ||||||||||||||||||||||||||||| || ||||||||||| |||
Sbjct: 416 ctccagttgttgccttctcttggaaagtcaatccattctggatggccaaactcattgccc 357
Query: 1010 ataaaattcaagtagccatcacctccaagggccattgtgatgaagtgaatcatcttttgg 1069
|||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 356 ataaaatttaagtagccatcacctccaagggccatcgtaatgaagtgaatcatcttttgg 297
Query: 1070 agtgcaatccctcgatcaattgtaggtgaagcaggctgcaagtctgacatgccagtgtac 1129
|||||||| || || | || |||||||||||||||||||||||||||||||||||||||
Sbjct: 296 agtgcaatgccacggttgatggtaggtgaagcaggctgcaagtctgacatgccagtgtac 237
Query: 1130 atttccttgtccatcaggagaaatgcaatagttttgtcgccaacaatagactgatcatgg 1189
|||||||||||||||| ||||||||| ||||| ||||| |||||||| ||||||||||||
Sbjct: 236 atttccttgtccatcaagagaaatgctatagtcttgtcaccaacaatggactgatcatgg 177
Query: 1190 ctctcagcatatgcgatgcatttttcagtatatctcctgttagtcaaagtatgcgctatt 1249
||||| ||||| || || |||||||| ||||||||||||||||||||||| ||| |||||
Sbjct: 176 ctctcggcataggcaatacatttttctgtatatctcctgttagtcaaagtttgcactatt 117
Query: 1250 tcacccatcgaccactcagagtcatctttattcttcaggtagtcaatccatctatcaggg 1309
|||| ||| ||||| | ||| ||||| |||||||||||||||||||||||||||||
Sbjct: 116 tcactcattgaccatttgcggtcctctttgttcttcaggtagtcaatccatctatcagga 57
Query: 1310 atagccattgccaggcgatagtcaaacccaaccccaccttcatcaactggccg 1362
|| |||||||||||||| |||||||||| || ||||||||||||||||||||
Sbjct: 56 atggccattgccaggcggaagtcaaaccctactccaccttcatcaactggccg 4
>gb|CF329597.1|CF329597 NACL--04-P17.b1 Rice callus plasmid cDNA library (NACL) Oryza sativa
(japonica cultivar-group) cDNA clone NACL--04-P17, mRNA
sequence
Length = 590
Score = 672 bits (339), Expect = 0.0
Identities = 525/587 (89%)
Strand = Plus / Minus
Query: 776 tcaaagacaataaccttttcctcatcgttcatgtcgctgacgatctgctttgacgacgaa 835
||||||||||||||||| || | |||||||||||||| || ||||||||||| || ||
Sbjct: 590 tcaaagacaataaccttatctttctcgttcatgtcgctaacaatctgctttgatgatgac 531
Query: 836 aggaaggaaaatctctcatcgagcgcattcatcgcttggtcaaacgcattcatgtacttg 895
|||||||||||| ||| ||||| |||||||| ||||| ||||| |||||||| ||||||
Sbjct: 530 aggaaggaaaattcctcctcgagtgcattcattgcttgatcaaatgcattcatatacttg 471
Query: 896 taccgcaagtgatcagtgtccacaaggctccactgtcgtctgcatttatcatagctccag 955
|| || | |||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 470 tatcgaaggtgatcagtgtcgacaaggctccactgacgtctgcatttatcatagctccag 411
Query: 956 ttgttcccttctcttggaaagtcaatccattctgggtgaccaaactcatttcccataaaa 1015
||||| ||||||||||||||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 410 ttgttgccttctcttggaaagtcaatccattctggatggccaaactcattgcccataaaa 351
Query: 1016 ttcaagtagccatcacctccaagggccattgtgatgaagtgaatcatcttttggagtgca 1075
|| |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 350 tttaagtagacatcacctccaagggccatcgtaatgaagtgaatcatcttttggagtgca 291
Query: 1076 atccctcgatcaattgtaggtgaagcaggctgcaagtctgacatgccagtgtacatttcc 1135
|| || || | || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 atgccacggttgatggtaggtgaagcaggctgcaagtctgacatgccagtgtacatttcc 231
Query: 1136 ttgtccatcaggagaaatgcaatagttttgtcgccaacaatagactgatcatggctctca 1195
|||||||||| ||||||||| ||||| ||||| |||||||| |||||||||||||||||
Sbjct: 230 ttgtccatcaagagaaatgctatagtcttgtcaccaacaatggactgatcatggctctcg 171
Query: 1196 gcatatgcgatgcatttttcagtatatctcctgttagtcaaagtatgcgctatttcaccc 1255
||||| || ||||||||||| ||||||||||||||||||||||| ||| ||||||||| |
Sbjct: 170 gcataggcaatgcatttttctgtatatctcctgttagtcaaagtttgcactatttcactc 111
Query: 1256 atcgaccactcagagtcatctttattcttcaggtagtcaatccatctatcagggatagcc 1315
|| ||||| | ||| ||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 110 attgaccatttgcggtcctctttgttcttcaggtagtcaatccatctatcaggaatggcc 51
Query: 1316 attgccaggcgatagtcaaacccaaccccaccttcatcaactggccg 1362
||||||||||| |||||||||| || ||||||||||||||||||||
Sbjct: 50 attgccaggcggaagtcaaaccctactccaccttcatcaactggccg 4
>gb|CF326784.1|CF326784 NACL--01-A02.g1 Rice callus plasmid cDNA library (NACL) Oryza sativa
(japonica cultivar-group) cDNA clone NACL--01-A02, mRNA
sequence
Length = 596
Score = 668 bits (337), Expect = 0.0
Identities = 529/593 (89%)
Strand = Plus / Minus
Query: 770 ccacgttcaaagacaataaccttttcctcatcgttcatgtcgctgacgatctgctttgac 829
||||||||||||||||||||||| || | |||||||||||||| || |||||||||||
Sbjct: 596 ccacgttcaaagacaataaccttatctttctcgttcatgtcgctaacaatctgctttgat 537
Query: 830 gacgaaaggaaggaaaatctctcatcgagcgcattcatcgcttggtcaaacgcattcatg 889
|| || |||||||||||| ||| ||||| |||||||| ||||| ||||| ||||||||
Sbjct: 536 gatgacaggaaggaaaattcctcctcgagtgcattcattgcttgatcaaatgcattcata 477
Query: 890 tacttgtaccgcaagtgatcagtgtccacaaggctccactgtcgtctgcatttatcatag 949
|||||||| || | |||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 476 tacttgtatcgaaggtgatcagtgtcgacaaggctccactgacgtctgcatttatcatag 417
Query: 950 ctccagttgttcccttctcttggaaagtcaatccattctgggtgaccaaactcatttccc 1009
||||||||||| ||||||||||||||||||||||||||||| | ||||||||||| |||
Sbjct: 416 ctccagttgttgccttctcttggaaagtcaatccattctggatagccaaactcattgccc 357
Query: 1010 ataaaattcaagtagccatcacctccaagggccattgtgatgaagtgaatcatcttttgg 1069
|||||||| ||||||||||||||||||| |||||| || |||||||||||||||||||||
Sbjct: 356 ataaaatttaagtagccatcacctccaaaggccatcgtaatgaagtgaatcatcttttgg 297
Query: 1070 agtgcaatccctcgatcaattgtaggtgaagcaggctgcaagtctgacatgccagtgtac 1129
|||||||| || || | || |||||||||||||||||||||||||||||||||||||||
Sbjct: 296 agtgcaatgccacggttgatggtaggtgaagcaggctgcaagtctgacatgccagtgtac 237
Query: 1130 atttccttgtccatcaggagaaatgcaatagttttgtcgccaacaatagactgatcatgg 1189
|||||||||||||||| ||||||||| ||||| ||| | |||||||| ||||||||||||
Sbjct: 236 atttccttgtccatcaagagaaatgctatagtcttgccaccaacaatggactgatcatgg 177
Query: 1190 ctctcagcatatgcgatgcatttttcagtatatctcctgttagtcaaagtatgcgctatt 1249
||||| ||||| || ||||||||||| ||||||||||||||||||||||| ||| |||||
Sbjct: 176 ctctcggcataggcaatgcatttttctgtatatctcctgttagtcaaagtttgcactatt 117
Query: 1250 tcacccatcgaccactcagagtcatctttattcttcaggtagtcaatccatctatcaggg 1309
|||| ||| ||||| | ||| ||||| |||||||||||||||||||||||||||||
Sbjct: 116 tcactcattgaccatttgcggtcctctttgttcttcaggtagtcaatccatctatcagga 57
Query: 1310 atagccattgccaggcgatagtcaaacccaaccccaccttcatcaactggccg 1362
|| |||||||||||||| |||||||||| || ||||||||||||||||||||
Sbjct: 56 atggccattgccaggcggaagtcaaaccctactccaccttcatcaactggccg 4
>gb|CF328664.1|CF328664 NACL--03-K20.g1 Rice callus plasmid cDNA library (NACL) Oryza sativa
(japonica cultivar-group) cDNA clone NACL--03-K20, mRNA
sequence
Length = 569
Score = 656 bits (331), Expect = 0.0
Identities = 505/563 (89%)
Strand = Plus / Minus
Query: 800 tcgttcatgtcgctgacgatctgctttgacgacgaaaggaaggaaaatctctcatcgagc 859
|||||||||||||| || ||||||||||| || || |||||||||||| ||| |||||
Sbjct: 566 tcgttcatgtcgctaacaatctgctttgatgatgacaggaaggaaaattcctcctcgagt 507
Query: 860 gcattcatcgcttggtcaaacgcattcatgtacttgtaccgcaagtgatcagtgtccaca 919
|||||||| ||||| ||||| |||||||| |||||||| || | |||||||||||| |||
Sbjct: 506 gcattcattgcttgatcaaatgcattcatatacttgtatcgaaggtgatcagtgtcgaca 447
Query: 920 aggctccactgtcgtctgcatttatcatagctccagttgttcccttctcttggaaagtca 979
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 446 aggctccactgacgtctgcatttatcatagctccagttgttgccttctcttggaaagtca 387
Query: 980 atccattctgggtgaccaaactcatttcccataaaattcaagtagccatcacctccaagg 1039
||||||||||| || ||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 386 atccattctggatggccaaactcattgcccataaaatttaagtagccatcacctccaagg 327
Query: 1040 gccattgtgatgaagtgaatcatcttttggagtgcaatccctcgatcaattgtaggtgaa 1099
||||| || ||||||||||||||||||||||||||||| || || | || |||||||||
Sbjct: 326 gccatcgtaatgaagtgaatcatcttttggagtgcaatgccacggttgatggtaggtgaa 267
Query: 1100 gcaggctgcaagtctgacatgccagtgtacatttccttgtccatcaggagaaatgcaata 1159
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 266 gcaggctgcaagtctgacatgccagtgtacatttccttgtccatcaagagaaatgctata 207
Query: 1160 gttttgtcgccaacaatagactgatcatggctctcagcatatgcgatgcatttttcagta 1219
|| ||||| |||||||| ||||||||||||||||| ||||| || ||||||||||| |||
Sbjct: 206 gtcttgtcaccaacaatggactgatcatggctctcggcataggcaatgcatttttctgta 147
Query: 1220 tatctcctgttagtcaaagtatgcgctatttcacccatcgaccactcagagtcatcttta 1279
|||||||||||||||||||| ||| ||||||||| ||| ||||| | ||| |||||
Sbjct: 146 tatctcctgttagtcaaagtttgcactatttcactcattgaccatttgcggtcctctttg 87
Query: 1280 ttcttcaggtagtcaatccatctatcagggatagccattgccaggcgatagtcaaaccca 1339
||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||
Sbjct: 86 ttcttcaggtagtcaatccatctatcaggaatggccattgccaggcggaagtcaaaccct 27
Query: 1340 accccaccttcatcaactggccg 1362
|| ||||||||||||| ||||||
Sbjct: 26 actccaccttcatcaaatggccg 4
>gb|CF331462.1|CF331462 NACL--07-J14.g1 Rice callus plasmid cDNA library (NACL) Oryza sativa
(japonica cultivar-group) cDNA clone NACL--07-J14, mRNA
sequence
Length = 637
Score = 650 bits (328), Expect = 0.0
Identities = 540/607 (88%), Gaps = 4/607 (0%)
Strand = Plus / Minus
Query: 722 ccctcgtaagttttcttgggatggaaattgaaaacaaaaa-ctaaatctccacgttcaaa 780
|||| ||||||||| |||||||| |||||||||||||||| | |||||||||||||||||
Sbjct: 633 cccttgtaagttttgttgggatgaaaattgaaaacaaaaaaccaaatctccacgttcaaa 574
Query: 781 gacaataaccttttcctcatcgttcatgtcgctgacgatctgctttgacgacgaaaggaa 840
|||||||||||| || | |||||||||||||| || ||||||||||| || || |||||
Sbjct: 573 gacaataaccttatctttctcgttcatgtcgctaacaatctgctttgatgatgacaggaa 514
Query: 841 ggaaaatctctcatcgagcgcattcatcgcttggtcaaacgcattcatgtacttgtaccg 900
||||||| ||| ||||| |||||||| ||||| ||||| |||||||| ||||| | ||
Sbjct: 513 ggaaaattcctcctcgagtgcattcattgcttgatcaaatgcattcatatacttat--cg 456
Query: 901 caagtgatcagtgtccacaaggctccactgtcgtctgcatttatcatagctccagttgtt 960
| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 455 aaggtgatcagtgtcgacaaggctccactgacgtctgcatttatcatagctccagttgtt 396
Query: 961 cccttctcttggaaagtcaatccattctgggtgaccaaactcatttcccataaaattcaa 1020
||||||||||||||||||||||||||||| || ||||||||||| ||||||||||| ||
Sbjct: 395 gccttctcttggaaagtcaatccattctggatggccaaactcattgcccataaaatttaa 336
Query: 1021 gtagccatcacctccaagggccattgtgatgaagtgaatcatcttttggagtgcaatccc 1080
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||
Sbjct: 335 gtagccatcacctccaagggccatcgtaatgaagtgaatcatcttttggagtgcaatgcc 276
Query: 1081 tcgatcaattgtaggtgaagcaggctgcaagtctgacatgccagtgtacatttccttgtc 1140
|| | || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 acggttgatggtaggtgaagcaggctgcaagtctgacatgccagtgtacatttccttgtc 216
Query: 1141 catcaggagaaatgcaatagt-tttgtcgccaacaatagactgatcatggctctcagcat 1199
||||| ||||||||| ||||| | ||| |||||||| ||| ||||||||||||| ||||
Sbjct: 215 catcaagagaaatgctatagtcatagtcaccaacaatggaccgatcatggctctcggcat 156
Query: 1200 atgcgatgcatttttcagtatatctcctgttagtcaaagtatgcgctatttcacccatcg 1259
| || ||||||||||| ||||||||||||||||||||||| ||| ||||||||| ||| |
Sbjct: 155 aggcaatgcatttttctgtatatctcctgttagtcaaagtttgcactatttcactcattg 96
Query: 1260 accactcagagtcatctttattcttcaggtagtcaatccatctatcagggatagccattg 1319
|||| | ||| ||||| ||||||||||||||||||||||||||||| || |||||||
Sbjct: 95 accatttgcggtcctctttgttcttcaggtagtcaatccatctatcaggaatggccattg 36
Query: 1320 ccaggcg 1326
|||||||
Sbjct: 35 ccaggcg 29
>gb|CF328834.1|CF328834 NACL--03-O21.b1 Rice callus plasmid cDNA library (NACL) Oryza sativa
(japonica cultivar-group) cDNA clone NACL--03-O21, mRNA
sequence
Length = 565
Score = 638 bits (322), Expect = e-180
Identities = 502/562 (89%)
Strand = Plus / Minus
Query: 801 cgttcatgtcgctgacgatctgctttgacgacgaaaggaaggaaaatctctcatcgagcg 860
||||||||||||| || ||||||||||| || || |||||||||||| ||| ||||| |
Sbjct: 565 cgttcatgtcgctaacaatctgctttgatgatgacaggaaggaaaattcctcctcgagtg 506
Query: 861 cattcatcgcttggtcaaacgcattcatgtacttgtaccgcaagtgatcagtgtccacaa 920
||||||| ||||| ||||| |||||||| |||||||| || | |||||||||||| ||||
Sbjct: 505 cattcattgcttgatcaaatgcattcatatacttgtatcgaaggtgatcagtgtcgacaa 446
Query: 921 ggctccactgtcgtctgcatttatcatagctccagttgttcccttctcttggaaagtcaa 980
|||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 445 ggctccactgacgtctgcatttatcatagctccagttgttgccttctcttggaaagtcaa 386
Query: 981 tccattctgggtgaccaaactcatttcccataaaattcaagtagccatcacctccaaggg 1040
|||||||||| || ||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 385 tccattctggatggccaaactcattgcccataaaatttaagtagccatcacctccaaggg 326
Query: 1041 ccattgtgatgaagtgaatcatcttttggagtgcaatccctcgatcaattgtaggtgaag 1100
|||| || ||||||||||||||||||||||||||||| || || | || ||||||||||
Sbjct: 325 ccatcgtaatgaagtgaatcatcttttggagtgcaatgccacggttgatggtaggtgaag 266
Query: 1101 caggctgcaagtctgacatgccagtgtacatttccttgtccatcaggagaaatgcaatag 1160
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 265 caggctgcaagtctgacataccagtgtacatttccttgtccatcaagagaaatgctatag 206
Query: 1161 ttttgtcgccaacaatagactgatcatggctctcagcatatgcgatgcatttttcagtat 1220
| ||||| |||||||| ||||||||||||||||| ||||| || ||||||||||| ||||
Sbjct: 205 tcttgtcaccaacaatggactgatcatggctctcggcataggcaatgcatttttctgtat 146
Query: 1221 atctcctgttagtcaaagtatgcgctatttcacccatcgaccactcagagtcatctttat 1280
||||||||||||||||||| ||| ||||||||| ||| ||||| | ||| ||||| |
Sbjct: 145 atctcctgttagtcaaagtttgcactatttcactcattgaccatttgcggtcctctttgt 86
Query: 1281 tcttcaggtagtcaatccatctatcagggatagccattgccaggcgatagtcaaacccaa 1340
||||||||||||||||||||| |||||| || |||||||||||||| ||||||| || |
Sbjct: 85 tcttcaggtagtcaatccatcaatcaggaatggccattgccaggcggaagtcaaatccta 26
Query: 1341 ccccaccttcatcaactggccg 1362
| ||||||||||||||||||||
Sbjct: 25 ctccaccttcatcaactggccg 4
>gb|CB000110.1|CB000110 S345W_D04 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 583
Score = 622 bits (314), Expect = e-175
Identities = 509/574 (88%)
Strand = Plus / Minus
Query: 1364 caaaggaccggcatgcctgaaacatcttcagcaacaacagttgcttctggcaagagtttg 1423
||||| || |||||||| ||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 579 caaagcactggcatgcccgaaacatcttcagcaacaatagttgcttccggcaagagttta 520
Query: 1424 tgcattaaatggtttgcaagcatcatgtaaacaactgcatccacagctgtgtccaaactg 1483
||||||||||||||||| |||||||||||||||| |||||||||| | || |||||||||
Sbjct: 519 tgcattaaatggtttgcgagcatcatgtaaacaattgcatccacatcggtatccaaactg 460
Query: 1484 aaatattcctggtagtttccagtaaaccccacattgataccatggtgatgatacagcatt 1543
||||| |||| ||||||||||||||| ||| |||||||||||||||||| || ||||||
Sbjct: 459 aaatactccttgtagtttccagtaaatcccttattgataccatggtgatggtatagcatt 400
Query: 1544 gatgtaactccatcaaatcggaagccatcaaacatgaattcatccaaccaatatctcagg 1603
|||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 399 gatgtaaccccatcaaatcggaagccatcaaacatgaattcgtccatccaatatctcaaa 340
Query: 1604 ttagaaagaagaaaccttaatacctcccagttagcatagttgaacagccgactatcccaa 1663
|||||||||||||| ||||| |||||||| || |||||||||||||| |||||||||||
Sbjct: 339 ttagaaagaagaaatcttaagacctcccaattggcatagttgaacagacgactatcccag 280
Query: 1664 agtttatgataacctctatctcccgcatgaaaataggactcttgggtgctttgtccaaca 1723
|||||||| || || |||||||| | ||||||||| ||||| || ||| ||||||||||
Sbjct: 279 agtttatggtagcccctatctcctgtatgaaaataagactcatgagtgttttgtccaacg 220
Query: 1724 tcatagccatttaaaccatctgtgacattattacttgcatggctatggacaacatccatc 1783
||||||||||||| |||||| || ||||||||||| ||||||||||||||||||||||||
Sbjct: 219 tcatagccatttagaccatcggtcacattattactcgcatggctatggacaacatccatc 160
Query: 1784 agaactcgcaaacccaaactgtgtgccttatcaacaagatatttgaggtcctctggtgtg 1843
|||||||| || || ||||| |||||||| |||||||||||||| || |||||||||||
Sbjct: 159 agaactcgtaatcctaaactatgtgccttgtcaacaagatatttcagatcctctggtgtt 100
Query: 1844 cctgatctgctgctaaccgcaaagaaatttgtcacatggtacccgaaagaagcatagtac 1903
|||||||||||||| || || || ||||||||||| || ||||| ||||||||| || |
Sbjct: 99 cctgatctgctgctgactgcgaaaaaatttgtcacgtgatacccaaaagaagcaaaggag 40
Query: 1904 gaatgctccataactgccatcaactgaactgtgt 1937
||||| ||||| | |||||| |||||||||||||
Sbjct: 39 gaatgttccatgattgccattaactgaactgtgt 6
>gb|CF323068.1|CF323068 HDN--02-N10.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--02-N10, mRNA sequence
Length = 514
Score = 519 bits (262), Expect = e-144
Identities = 445/506 (87%)
Strand = Plus / Minus
Query: 1657 atcccaaagtttatgataacctctatctcccgcatgaaaataggactcttgggtgctttg 1716
|||||| |||||||| || || |||||||| | ||||||||| ||||| || ||| ||||
Sbjct: 514 atcccagagtttatggtagcccctatctcctgtatgaaaataagactcatgagtgttttg 455
Query: 1717 tccaacatcatagccatttaaaccatctgtgacattattacttgcatggctatggacaac 1776
|||||| ||||||||||||| |||||| || ||||||||||| |||||||||||||||||
Sbjct: 454 tccaacgtcatagccatttagaccatcggtcacattattactcgcatggctatggacaac 395
Query: 1777 atccatcagaactcgcaaacccaaactgtgtgccttatcaacaagatatttgaggtcctc 1836
||||||||||||||| || || ||||| |||||||| |||||||||||||| || |||||
Sbjct: 394 atccatcagaactcgtaatcctaaactatgtgccttgtcaacaagatatttcagatcctc 335
Query: 1837 tggtgtgcctgatctgctgctaaccgcaaagaaatttgtcacatggtacccgaaagaagc 1896
|||||| |||||||||||||| || || || ||||||||||| || ||||| ||||||||
Sbjct: 334 tggtgttcctgatctgctgctgactgcgaaaaaatttgtcacgtgatacccaaaagaagc 275
Query: 1897 atagtacgaatgctccataactgccatcaactgaactgtgttgtagttatttgctcgtat 1956
|||||| ||||| ||||| | |||||| |||||||||||||||||||||||||| |||||
Sbjct: 274 atagtaggaatgttccatgattgccattaactgaactgtgttgtagttatttgcccgtat 215
Query: 1957 gcgtggcaacacattgtctgcaaattccctatatgtgcttactgctggcttttcaccact 2016
|||||| |||||||||||||||||||| || |||||||||||| |||||| |||||||||
Sbjct: 214 gcgtggtaacacattgtctgcaaattctctgtatgtgcttacttctggctcttcaccact 155
Query: 2017 catacctacatgggcttcatagatacgtggagcagcaggctttgaaggccgaggatgctt 2076
||| || ||||| || |||||||| ||||||||| |||| |||| ||| |||||||||||
Sbjct: 154 catccccacatgagcctcatagatgcgtggagcatcaggttttggaggtcgaggatgctt 95
Query: 2077 aaatgtgtacctttcagaagcaggaggatcccaatgaacaccatcatagggagctccaaa 2136
||| |||||||||| | || ||||||||||| || ||||||||||| |||||||||||
Sbjct: 94 aaacacgtacctttcacaggctggaggatcccagtgtacaccatcatatggagctccaaa 35
Query: 2137 tttagaggcatcaacagtcgcataac 2162
|||||||||||||| ||| |||||||
Sbjct: 34 tttagaggcatcaaaagttgcataac 9
>gb|CB670827.1|CB670827 OSJNEe04B18.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04B18 3', mRNA sequence
Length = 834
Score = 373 bits (188), Expect = e-100
Identities = 332/380 (87%)
Strand = Plus / Plus
Query: 518 taagccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaag 577
|||||||||||||| |||||||| |||||||||||||| ||||| || |||||||||||
Sbjct: 454 taagccacacaggtacggggcggggaaaggactttgaatgagttagggcggttgttgaaa 513
Query: 578 ttcgtttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggcca 637
|| ||||| || || ||||||| || || || ||||||||||||||||| || ||||||
Sbjct: 514 tttgtttctggtactcctggcattccctcgggagacgtgaagtgatccacatcatggcca 573
Query: 638 actcttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttccca 697
||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 574 actcttccatggccaccaaagaccaaagcatcagagtccagagctactctgtacttcccg 633
Query: 698 ggcaaatcgcatcccactttgtagccctcgtaagttttcttgggatggaaattgaaaaca 757
||||| || ||||| |||||||| |||| ||||||||| |||||||| ||||||||||||
Sbjct: 634 ggcaagtcacatccgactttgtaacccttgtaagttttgttgggatgaaaattgaaaaca 693
Query: 758 aaaactaaatctccacgttcaaagacaataaccttttcctcatcgttcatgtcgctgacg 817
||||| ||||||||||||||||||||||||||||| || | |||||||||||||| ||
Sbjct: 694 aaaaccaaatctccacgttcaaagacaataaccttatctttctcgttcatgtcgctaaca 753
Query: 818 atctgctttgacgacgaaaggaaggaaaatctctcatcgagcgcattcatcgcttggtca 877
||||||||||| || || |||||||||||| ||| ||||| |||||||| ||||| |||
Sbjct: 754 atctgctttgatgatgacaggaaggaaaattcctcctcgagtgcattcattgcttgatca 813
Query: 878 aacgcattcatgtacttgta 897
|| |||||||| ||||||||
Sbjct: 814 aatgcattcatatacttgta 833
>gb|CB670826.1|CB670826 OSJNEe04B18.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04B18 5', mRNA sequence
Length = 859
Score = 365 bits (184), Expect = 9e-098
Identities = 454/542 (83%), Gaps = 4/542 (0%)
Strand = Plus / Minus
Query: 2024 acatgggcttcatagatacgtggagcagcaggctttgaaggccgaggatgcttaaatgtg 2083
||||| ||||||||||| ||||||||| ||| |||| ||| |||||||||| ||| |
Sbjct: 859 acatgagcttcatagatgcgtggagcatcagt-tttggaggtcgaggatgctaaaacacg 801
Query: 2084 tacctttcagaagcaggaggatcccaatgaacaccatcatagggagctccaaatttagag 2143
||||||||| | || ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 800 tacctttcacaggctggaggatcccagtgtacaccatcatatggagctccaaatttagag 741
Query: 2144 gcatcaacagtcgcataacgaatcaatgctggaatacgatcaacccatactccacc---a 2200
||||||| ||| |||||||||||| |||| |||||||||||||||||| ||||||| |
Sbjct: 740 gcatcaaaagttgcataacgaatccatgcgggaatacgatcaacccatgctccaccccca 681
Query: 2201 tgtagaaagcgaaatttaaccttggaattgtgagggatggcaggtttccctttgacatgg 2260
|| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 680 tgcctaaagcgaaatttaaccttggaattgtgagggatggcaggcttcccattgacatgt 621
Query: 2261 tcaattttgatcgaccaaacaccaaatttatccttctccatcttatggtttgcaccattc 2320
||| ||||| ||||||| ||||||||||||||||||||||| || ||||||||||||
Sbjct: 620 gaaatcttgattgaccaaatgccaaatttatccttctccatcttgtgttttgcaccattc 561
Query: 2321 cagtcattgaagtcaccaataagctctgcctcctgcgcagcaggtgcccattcacgatat 2380
|||| |||||| |||||||| |||| ||| || || |||||||| |||||||||||||||
Sbjct: 560 cagttattgaactcaccaatgagctgtgcttcttgtgcagcaggcgcccattcacgatat 501
Query: 2381 acagttccatcctcatttgtattaatcccaaatttcaaatagcctttagaaaaagattca 2440
| || || | ||| ||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 500 attgtggcaccatcaactgtattaatcccaaacttcaaatagcctttagaaaattcttca 441
Query: 2441 agacttccctcattttcttcaattgatcctttctgctctaggaatcttttcatccggtac 2500
|| | ||||||| || |||||| | |||||| || ||| ||||||| |||| ||
Sbjct: 440 aggcccccctcatgtttttcaatcaggcatttctggtcgaggtatctttttatcctatag 381
Query: 2501 ctgaaatggtccttgaatatctccagcttggggtccaggtcgtatatggggagatggtcg 2560
|||| || ||||||||| ||||| ||| |||||||| || ||||| || || ||||||
Sbjct: 380 ttgaagtgatccttgaattcctccaacttagggtccagatcatatataggaaggtggtcg 321
Query: 2561 ac 2562
||
Sbjct: 320 ac 319
>gb|CB644683.1|CB644683 OSJNEb06A04.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb06A04 3', mRNA sequence
Length = 810
Score = 353 bits (178), Expect = 3e-094
Identities = 316/362 (87%)
Strand = Plus / Plus
Query: 518 taagccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaag 577
|||||||||||||| |||||||| |||||||||||||| ||||| || |||||||||||
Sbjct: 445 taagccacacaggtacggggcggggaaaggactttgaatgagttagggcggttgttgaaa 504
Query: 578 ttcgtttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggcca 637
|| ||||| || || ||||||| || || || ||||||||||||||||| || ||||||
Sbjct: 505 tttgtttctggtactcctggcattccctcgggagacgtgaagtgatccacatcatggcca 564
Query: 638 actcttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttccca 697
||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 565 actcttccatggccaccaaagaccaaagcatcagagtccagagctactctgtacttcccg 624
Query: 698 ggcaaatcgcatcccactttgtagccctcgtaagttttcttgggatggaaattgaaaaca 757
||||| || ||||| |||||||| |||| ||||||||| |||||||| ||||||||||||
Sbjct: 625 ggcaagtcacatccgactttgtaacccttgtaagttttgttgggatgaaaattgaaaaca 684
Query: 758 aaaactaaatctccacgttcaaagacaataaccttttcctcatcgttcatgtcgctgacg 817
||||| ||||||||||||||||||||||||||||| || | |||||||||||||| ||
Sbjct: 685 aaaaccaaatctccacgttcaaagacaataaccttatctttctcgttcatgtcgctaaca 744
Query: 818 atctgctttgacgacgaaaggaaggaaaatctctcatcgagcgcattcatcgcttggtca 877
||||||||||| || || |||||||||||| ||| ||||| |||||||| ||||| |||
Sbjct: 745 atctgctttgatgatgacaggaaggaaaattcctcctcgagtgcattcattgcttgatca 804
Query: 878 aa 879
||
Sbjct: 805 aa 806
>dbj|AP004004.1| Oryza sativa (japonica cultivar-group) chromosome 6 clone OJ1165_E01, ***
SEQUENCING IN PROGRESS ***
Length = 101546
Score = 274 bits (138), Expect = 2e-070
Identities = 233/264 (88%), Gaps = 3/264 (1%)
Strand = Plus / Minus
Query: 2085 acctttcagaagcaggaggatcccaatgaacaccatcatagggagctccaaatttagagg 2144
|||||||| | || ||||||||||| || ||||||||||| |||||||||||||||||||
Sbjct: 101515 acctttcacaggctggaggatcccagtgtacaccatcatatggagctccaaatttagagg 101456
Query: 2145 catcaacagtcgcataacgaatcaatgctggaatacgatcaacccatactccacc---at 2201
|||||| ||| |||||||||||| |||| |||||||||||||||||| ||||||| ||
Sbjct: 101455 catcaaaagttgcataacgaatccatgcgggaatacgatcaacccatgctccacccccat 101396
Query: 2202 gtagaaagcgaaatttaaccttggaattgtgagggatggcaggtttccctttgacatggt 2261
| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 101395 gcctaaagcgaaatttaaccttggaattgtgagggatggcaggcttcccattgacatgtg 101336
Query: 2262 caattttgatcgaccaaacaccaaatttatccttctccatcttatggtttgcaccattcc 2321
||| ||||| ||||||| ||||||||||||||||||||||| || |||||||||||||
Sbjct: 101335 aaatcttgattgaccaaatgccaaatttatccttctccatcttgtgttttgcaccattcc 101276
Query: 2322 agtcattgaagtcaccaataagct 2345
||| |||||| |||||||| ||||
Sbjct: 101275 agttattgaactcaccaatgagct 101252
Score = 58.0 bits (29), Expect = 3e-005
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 2357 gcagcaggtgcccattcacgatatacagttccatcctcatttgtattaatcccaaatttc 2416
|||||||| |||||||||||||||| || || | ||| ||||||||||||||| |||
Sbjct: 100806 gcagcaggcgcccattcacgatatattgtggcaccatcaactgtattaatcccaaacttc 100747
Query: 2417 aaatagcct 2425
|||||||||
Sbjct: 100746 aaatagcct 100738
>gb|C99342.1|C99342 C99342 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10727_8Z, mRNA sequence
Length = 748
Score = 258 bits (130), Expect = 1e-065
Identities = 239/275 (86%), Gaps = 1/275 (0%)
Strand = Plus / Minus
Query: 518 taagccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaag 577
|||||||||||||| |||||||| |||||||||||||| ||||| || |||||||||||
Sbjct: 288 taagccacacaggtacggggcggggaaaggactttgaatgagttagggcggttgttgaaa 229
Query: 578 ttcgtttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggcca 637
|| ||||| || || ||||||| || || || ||||||||||||||||| || ||||||
Sbjct: 228 tttgtttctggtactcctggcattccctcgggagacgtgaagtgatccacatcatggcca 169
Query: 638 actcttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttccca 697
||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 168 actcttccatggccaccaaagaccaaagcatcagagtccagagctactctgtacttcccg 109
Query: 698 ggcaaatcgcatcccactttgtagccctcgtaagttttcttgggatggaaattgaaaaca 757
||||| || ||||| |||||||| || ||||| ||| |||||||| ||||||||||||
Sbjct: 108 ggcaagtcacatccgactttgtaanccctgtaag-tttgttgggatgaaaattgaaaaca 50
Query: 758 aaaactaaatctccacgttcaaagacaataacctt 792
||||| |||||| |||||||||||||||||| |||
Sbjct: 49 aaaaccaaatctncacgttcaaagacaataanctt 15
>gb|CF196291.1|CF196291 Azvi2.1_B03 AZ-VI Oryza sativa (japonica cultivar-group) cDNA clone
AZ-VI2.1B03 5', mRNA sequence
Length = 550
Score = 256 bits (129), Expect = 6e-065
Identities = 201/225 (89%)
Strand = Plus / Minus
Query: 800 tcgttcatgtcgctgacgatctgctttgacgacgaaaggaaggaaaatctctcatcgagc 859
|||||||||||||| || ||||||||||| || || |||||||||||| ||| |||||
Sbjct: 225 tcgttcatgtcgctaacaatctgctttgatgatgacaggaaggaaaattcctcctcgagt 166
Query: 860 gcattcatcgcttggtcaaacgcattcatgtacttgtaccgcaagtgatcagtgtccaca 919
|||||||| ||||| ||||| |||||||| |||||||| || | |||||||||||| |||
Sbjct: 165 gcattcattgcttgatcaaatgcattcatatacttgtatcgaaggtgatcagtgtcgaca 106
Query: 920 aggctccactgtcgtctgcatttatcatagctccagttgttcccttctcttggaaagtca 979
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 105 aggctccactgacgtctgcatttatcatagctccagttgttgtcttctcttggaaagtca 46
Query: 980 atccattctgggtgaccaaactcatttcccataaaattcaagtag 1024
||||||||||| || ||||||||||| ||||||||||| ||||||
Sbjct: 45 atccattctggatggccaaactcattgcccataaaatttaagtag 1
Score = 232 bits (117), Expect = 8e-058
Identities = 165/181 (91%)
Strand = Plus / Minus
Query: 611 gacgtgaagtgatccacgtcgtggccaactcttccatgtccaccgaagaccagagcatca 670
||||||||||||||||| || ||||||||||||||||| ||||| ||||||| |||||||
Sbjct: 477 gacgtgaagtgatccacatcatggccaactcttccatggccaccaaagaccaaagcatca 418
Query: 671 gagtccagggctactctgtatttcccaggcaaatcgcatcccactttgtagccctcgtaa 730
|||||||| ||||||||||| ||||| ||||| || ||||| |||||||| |||| ||||
Sbjct: 417 gagtccagagctactctgtacttcccgggcaagtcacatccgactttgtaacccttgtaa 358
Query: 731 gttttcttgggatggaaattgaaaacaaaaactaaatctccacgttcaaagacaataacc 790
||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 357 gttttgttgggatgaaaattgaaaacaaaaaccaaatctccacgttcaaagacaataacc 298
Query: 791 t 791
|
Sbjct: 297 t 297
>gb|CF196311.1|CF196311 Azvi2.1_D03 AZ-VI Oryza sativa (japonica cultivar-group) cDNA clone
AZ-VI2.1D03 5', mRNA sequence
Length = 430
Score = 256 bits (129), Expect = 6e-065
Identities = 201/225 (89%)
Strand = Plus / Minus
Query: 800 tcgttcatgtcgctgacgatctgctttgacgacgaaaggaaggaaaatctctcatcgagc 859
|||||||||||||| || ||||||||||| || || |||||||||||| ||| |||||
Sbjct: 225 tcgttcatgtcgctaacaatctgctttgatgatgacaggaaggaaaattcctcctcgagt 166
Query: 860 gcattcatcgcttggtcaaacgcattcatgtacttgtaccgcaagtgatcagtgtccaca 919
|||||||| ||||| ||||| |||||||| |||||||| || | |||||||||||| |||
Sbjct: 165 gcattcattgcttgatcaaatgcattcatatacttgtatcgaaggtgatcagtgtcgaca 106
Query: 920 aggctccactgtcgtctgcatttatcatagctccagttgttcccttctcttggaaagtca 979
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 105 aggctccactgacgtctgcatttatcatagctccagttgttgtcttctcttggaaagtca 46
Query: 980 atccattctgggtgaccaaactcatttcccataaaattcaagtag 1024
||||||||||| || ||||||||||| ||||||||||| ||||||
Sbjct: 45 atccattctggatggccaaactcattgcccataaaatttaagtag 1
Score = 93.7 bits (47), Expect = 5e-016
Identities = 53/55 (96%)
Strand = Plus / Minus
Query: 737 ttgggatggaaattgaaaacaaaaactaaatctccacgttcaaagacaataacct 791
|||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 351 ttgggatgaaaattgaaaacaaaaaccaaatctccacgttcaaagacaataacct 297
Score = 50.1 bits (25), Expect = 0.007
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 658 gaccagagcatcagagtccagggctactctgta 690
||||| ||||||||||||||| |||||||||||
Sbjct: 430 gaccaaagcatcagagtccagagctactctgta 398
>gb|CF196373.1|CF196373 Azvi2.2_B11 AZ-VI Oryza sativa (japonica cultivar-group) cDNA clone
AZ-VI2.2B11 5', mRNA sequence
Length = 480
Score = 256 bits (129), Expect = 6e-065
Identities = 201/225 (89%)
Strand = Plus / Minus
Query: 800 tcgttcatgtcgctgacgatctgctttgacgacgaaaggaaggaaaatctctcatcgagc 859
|||||||||||||| || ||||||||||| || || |||||||||||| ||| |||||
Sbjct: 225 tcgttcatgtcgctaacaatctgctttgatgatgacaggaaggaaaattcctcctcgagt 166
Query: 860 gcattcatcgcttggtcaaacgcattcatgtacttgtaccgcaagtgatcagtgtccaca 919
|||||||| ||||| ||||| |||||||| |||||||| || | |||||||||||| |||
Sbjct: 165 gcattcattgcttgatcaaatgcattcatatacttgtatcgaaggtgatcagtgtcgaca 106
Query: 920 aggctccactgtcgtctgcatttatcatagctccagttgttcccttctcttggaaagtca 979
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 105 aggctccactgacgtctgcatttatcatagctccagttgttgtcttctcttggaaagtca 46
Query: 980 atccattctgggtgaccaaactcatttcccataaaattcaagtag 1024
||||||||||| || ||||||||||| ||||||||||| ||||||
Sbjct: 45 atccattctggatggccaaactcattgcccataaaatttaagtag 1
Score = 190 bits (96), Expect = 3e-045
Identities = 152/172 (88%)
Strand = Plus / Minus
Query: 620 tgatccacgtcgtggccaactcttccatgtccaccgaagaccagagcatcagagtccagg 679
|||||||| || |||||| |||||||| ||||| ||||||| |||||||||||||||
Sbjct: 468 tgatccacatcatggccannncttccatggccaccaaagaccaaagcatcagagtccaga 409
Query: 680 gctactctgtatttcccaggcaaatcgcatcccactttgtagccctcgtaagttttcttg 739
||||||||||| ||||| |||| || ||||| |||||||| |||| ||||||||| |||
Sbjct: 408 gctactctgtacttcccgggcangtcacatccgactttgtaacccttgtaagttttgttg 349
Query: 740 ggatggaaattgaaaacaaaaactaaatctccacgttcaaagacaataacct 791
||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 348 ggatgaaaattgaaaacaaaaaccaaatctccacgttcaaagacaataacct 297
>gb|CF196390.1|CF196390 Azvi2.2_D07 AZ-VI Oryza sativa (japonica cultivar-group) cDNA clone
AZ-VI2.2D07 5', mRNA sequence
Length = 389
Score = 256 bits (129), Expect = 6e-065
Identities = 201/225 (89%)
Strand = Plus / Minus
Query: 800 tcgttcatgtcgctgacgatctgctttgacgacgaaaggaaggaaaatctctcatcgagc 859
|||||||||||||| || ||||||||||| || || |||||||||||| ||| |||||
Sbjct: 225 tcgttcatgtcgctaacaatctgctttgatgatgacaggaaggaaaattcctcctcgagt 166
Query: 860 gcattcatcgcttggtcaaacgcattcatgtacttgtaccgcaagtgatcagtgtccaca 919
|||||||| ||||| ||||| |||||||| |||||||| || | |||||||||||| |||
Sbjct: 165 gcattcattgcttgatcaaatgcattcatatacttgtatcgaaggtgatcagtgtcgaca 106
Query: 920 aggctccactgtcgtctgcatttatcatagctccagttgttcccttctcttggaaagtca 979
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 105 aggctccactgacgtctgcatttatcatagctccagttgttgtcttctcttggaaagtca 46
Query: 980 atccattctgggtgaccaaactcatttcccataaaattcaagtag 1024
||||||||||| || ||||||||||| ||||||||||| ||||||
Sbjct: 45 atccattctggatggccaaactcattgcccataaaatttaagtag 1
Score = 56.0 bits (28), Expect = 1e-004
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 764 aaatctccacgttcaaagacaataacct 791
||||||||||||||||||||||||||||
Sbjct: 324 aaatctccacgttcaaagacaataacct 297
>gb|CF196400.1|CF196400 Azvi2.2_E07 AZ-VI Oryza sativa (japonica cultivar-group) cDNA clone
AZ-VI2.2E07 5', mRNA sequence
Length = 289
Score = 256 bits (129), Expect = 6e-065
Identities = 201/225 (89%)
Strand = Plus / Minus
Query: 800 tcgttcatgtcgctgacgatctgctttgacgacgaaaggaaggaaaatctctcatcgagc 859
|||||||||||||| || ||||||||||| || || |||||||||||| ||| |||||
Sbjct: 225 tcgttcatgtcgctaacaatctgctttgatgatgacaggaaggaaaattcctcctcgagt 166
Query: 860 gcattcatcgcttggtcaaacgcattcatgtacttgtaccgcaagtgatcagtgtccaca 919
|||||||| ||||| ||||| |||||||| |||||||| || | |||||||||||| |||
Sbjct: 165 gcattcattgcttgatcaaatgcattcatatacttgtatcgaaggtgatcagtgtcgaca 106
Query: 920 aggctccactgtcgtctgcatttatcatagctccagttgttcccttctcttggaaagtca 979
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 105 aggctccactgacgtctgcatttatcatagctccagttgttgtcttctcttggaaagtca 46
Query: 980 atccattctgggtgaccaaactcatttcccataaaattcaagtag 1024
||||||||||| || ||||||||||| ||||||||||| ||||||
Sbjct: 45 atccattctggatggccaaactcattgcccataaaatttaagtag 1
>gb|CF196410.1|CF196410 Azvi2.2_F07 AZ-VI Oryza sativa (japonica cultivar-group) cDNA clone
AZ-VI2.2F07 5', mRNA sequence
Length = 360
Score = 256 bits (129), Expect = 6e-065
Identities = 201/225 (89%)
Strand = Plus / Minus
Query: 800 tcgttcatgtcgctgacgatctgctttgacgacgaaaggaaggaaaatctctcatcgagc 859
|||||||||||||| || ||||||||||| || || |||||||||||| ||| |||||
Sbjct: 225 tcgttcatgtcgctaacaatctgctttgatgatgacaggaaggaaaattcctcctcgagt 166
Query: 860 gcattcatcgcttggtcaaacgcattcatgtacttgtaccgcaagtgatcagtgtccaca 919
|||||||| ||||| ||||| |||||||| |||||||| || | |||||||||||| |||
Sbjct: 165 gcattcattgcttgatcaaatgcattcatatacttgtatcgaaggtgatcagtgtcgaca 106
Query: 920 aggctccactgtcgtctgcatttatcatagctccagttgttcccttctcttggaaagtca 979
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 105 aggctccactgacgtctgcatttatcatagctccagttgttgtcttctcttggaaagtca 46
Query: 980 atccattctgggtgaccaaactcatttcccataaaattcaagtag 1024
||||||||||| || ||||||||||| ||||||||||| ||||||
Sbjct: 45 atccattctggatggccaaactcattgcccataaaatttaagtag 1
Score = 60.0 bits (30), Expect = 7e-006
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 746 aaattgaaaacaaaaactaaatctccacgttcaaagacaataacct 791
|||||||||||||| || | ||||||||||||||||||||||||
Sbjct: 342 aaattgaaaacaaanaccannnctccacgttcaaagacaataacct 297
>gb|CF196422.1|CF196422 Azvi2.2_G10 AZ-VI Oryza sativa (japonica cultivar-group) cDNA clone
AZ-VI2.2G10 5', mRNA sequence
Length = 369
Score = 256 bits (129), Expect = 6e-065
Identities = 201/225 (89%)
Strand = Plus / Minus
Query: 800 tcgttcatgtcgctgacgatctgctttgacgacgaaaggaaggaaaatctctcatcgagc 859
|||||||||||||| || ||||||||||| || || |||||||||||| ||| |||||
Sbjct: 225 tcgttcatgtcgctaacaatctgctttgatgatgacaggaaggaaaattcctcctcgagt 166
Query: 860 gcattcatcgcttggtcaaacgcattcatgtacttgtaccgcaagtgatcagtgtccaca 919
|||||||| ||||| ||||| |||||||| |||||||| || | |||||||||||| |||
Sbjct: 165 gcattcattgcttgatcaaatgcattcatatacttgtatcgaaggtgatcagtgtcgaca 106
Query: 920 aggctccactgtcgtctgcatttatcatagctccagttgttcccttctcttggaaagtca 979
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 105 aggctccactgacgtctgcatttatcatagctccagttgttgtcttctcttggaaagtca 46
Query: 980 atccattctgggtgaccaaactcatttcccataaaattcaagtag 1024
||||||||||| || ||||||||||| ||||||||||| ||||||
Sbjct: 45 atccattctggatggccaaactcattgcccataaaatttaagtag 1
Score = 71.9 bits (36), Expect = 2e-009
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 752 aaaacaaaaactaaatctccacgttcaaagacaataacct 791
||||||||||| ||||||||||||||||||||||||||||
Sbjct: 336 aaaacaaaaaccaaatctccacgttcaaagacaataacct 297
>gb|CF329598.1|CF329598 NACL--04-P17.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--04-P17, mRNA sequence
Length = 662
Score = 204 bits (103), Expect = 2e-049
Identities = 191/219 (87%), Gaps = 1/219 (0%)
Strand = Plus / Plus
Query: 518 taagccacacaggtgcggggcggagaaaggactttgaacgagttcgg-ccggttgttgaa 576
|||||||||||||| |||||||| |||||||||||||| ||||| || ||||||||||||
Sbjct: 443 taagccacacaggtacggggcggggaaaggactttgaatgagttagggccggttgttgaa 502
Query: 577 gttcgtttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggcc 636
|| ||||| || || ||||||| || || || ||||||||||||||||| || |||||
Sbjct: 503 atttgtttctggtactcctggcattccctcgggagacgtgaagtgatccacatcatggcc 562
Query: 637 aactcttccatgtccaccgaagaccagagcatcagagtccagggctactctgtatttccc 696
|||||||||||| ||||| ||||||| ||||||||||||||| ||||||||||| |||||
Sbjct: 563 aactcttccatggccaccaaagaccaaagcatcagagtccagagctactctgtacttccc 622
Query: 697 aggcaaatcgcatcccactttgtagccctcgtaagtttt 735
||||| || ||||| |||||||| |||| |||||||||
Sbjct: 623 gggcaagtcacatccgactttgtaacccttgtaagtttt 661
>gb|CF306431.1|CF306431 HDA1--03-N05.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--03-N05, mRNA sequence
Length = 524
Score = 176 bits (89), Expect = 4e-041
Identities = 152/173 (87%)
Strand = Plus / Minus
Query: 518 taagccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaag 577
|||||||||||||| |||||||| |||||||||||||| ||||| || |||||||||||
Sbjct: 182 taagccacacaggtacggggcggggaaaggactttgaatgagttagggcggttgttgaaa 123
Query: 578 ttcgtttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggcca 637
|| ||||| || || ||||||| || || || ||||||||||||||||| || ||||||
Sbjct: 122 tttgtttctggtactcctggcattccctcgggagacgtgaagtgatccacatcatggcca 63
Query: 638 actcttccatgtccaccgaagaccagagcatcagagtccagggctactctgta 690
||||||||||| ||||| ||||||| ||||||||||||||| |||||||||||
Sbjct: 62 actcttccatggccaccaaagaccaaagcatcagagtccagagctactctgta 10
>gb|CF326783.1|CF326783 NACL--01-A02.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--01-A02, mRNA sequence
Length = 595
Score = 111 bits (56), Expect = 2e-021
Identities = 112/131 (85%)
Strand = Plus / Plus
Query: 518 taagccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaag 577
|||||||||||||| |||||||| |||||||||||||| |||| | |||||||||||
Sbjct: 465 taagccacacaggtacggggcggggaaaggactttgaatgagtagnggcggttgttgaaa 524
Query: 578 ttcgtttcgggcacccctggcaccccttcaggcgacgtgaagtgatccacgtcgtggcca 637
|| ||||| || || ||||||| || || || ||||||||||||||||| || ||||||
Sbjct: 525 tttgtttctggtactcctggcattccctcgggagacgtgaagtgatccacatcatggcca 584
Query: 638 actcttccatg 648
|||||||||||
Sbjct: 585 actcttccatg 595
>gb|CF330663.1|CF330663 NACL--06-H13.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--06-H13, mRNA sequence
Length = 604
Score = 93.7 bits (47), Expect = 5e-016
Identities = 96/111 (86%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 518 taagccacacaggtgcggggcggagaaaggactttgaacgagtt-cggccggttgttgaa 576
|||||||||||||| |||||||| |||||||||||||| ||||| ||||||||||||||
Sbjct: 488 taagccacacaggtacggggcggggaaaggactttgaatgagttagggccggttgttgaa 547
Query: 577 gttcgtttcgggcacccctggcaccccttcaggcgacgtgaagtgatccac 627
|| ||||| || || ||||||| || || || |||||||||||||||||
Sbjct: 548 atttgtttctggtactcctggcattccctcgggagacgtgaagtgatccac 598
>gb|CA999094.1|CA999094 S234N_G07 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 520
Score = 87.7 bits (44), Expect = 3e-014
Identities = 89/104 (85%)
Strand = Plus / Minus
Query: 518 taagccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaag 577
|||||||||||||| |||||||| |||||||||||||| ||||| || |||||||||||
Sbjct: 104 taagccacacaggtacggggcggggaaaggactttgaatgagttagggcggttgttgaaa 45
Query: 578 ttcgtttcgggcacccctggcaccccttcaggcgacgtgaagtg 621
|| ||||| || || ||||||| || || || |||||||||||
Sbjct: 44 tttgtttctggtactcctggcattccctcgggagacgtgaagtg 1
>gb|CA999317.1|CA999317 S234G_B07 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 520
Score = 87.7 bits (44), Expect = 3e-014
Identities = 89/104 (85%)
Strand = Plus / Minus
Query: 518 taagccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaag 577
|||||||||||||| |||||||| |||||||||||||| ||||| || |||||||||||
Sbjct: 104 taagccacacaggtacggggcggggaaaggactttgaatgagttagggcggttgttgaaa 45
Query: 578 ttcgtttcgggcacccctggcaccccttcaggcgacgtgaagtg 621
|| ||||| || || ||||||| || || || |||||||||||
Sbjct: 44 tttgtttctggtactcctggcattccctcgggagacgtgaagtg 1
>gb|CB000653.1|CB000653 S345L_B12 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 520
Score = 87.7 bits (44), Expect = 3e-014
Identities = 89/104 (85%)
Strand = Plus / Minus
Query: 518 taagccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaag 577
|||||||||||||| |||||||| |||||||||||||| ||||| || |||||||||||
Sbjct: 104 taagccacacaggtacggggcggggaaaggactttgaatgagttagggcggttgttgaaa 45
Query: 578 ttcgtttcgggcacccctggcaccccttcaggcgacgtgaagtg 621
|| ||||| || || ||||||| || || || |||||||||||
Sbjct: 44 tttgtttctggtactcctggcattccctcgggagacgtgaagtg 1
>gb|CB000365.1|CB000365 S345U_H04 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 521
Score = 77.8 bits (39), Expect = 3e-011
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 518 taagccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaa 576
|||||||||||||| |||||||| |||||||||||||| ||||| || |||||||||||
Sbjct: 105 taagccacacaggtacggggcggggaaaggactttgaatgagttagggcggttgttgaa 47
>gb|AU163772.1|AU163772 AU163772 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10963, mRNA sequence
Length = 623
Score = 73.8 bits (37), Expect = 5e-010
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 518 taagccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaag 577
|||||||||||||| |||||||| |||||||||||||| ||||| || ||| |||||||
Sbjct: 161 taagccacacaggtacggggcggggaaaggactttgaatgagttagggcggntgttgaaa 102
Query: 578 ttcgtttc 585
|| |||||
Sbjct: 101 tttgtttc 94
>gb|CB000500.1|CB000500 S345C_B01 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 525
Score = 71.9 bits (36), Expect = 2e-009
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 518 taagccacacaggtgcggggcggagaaaggactttgaacgagttcggccggttgttgaag 577
|||||||||||||| |||||||| ||||||| |||||| ||||| || |||||||||||
Sbjct: 80 taagccacacaggtacggggcggggaaaggagtttgaatgagttagggcggttgttgaaa 21
Query: 578 ttcgtttc 585
|| |||||
Sbjct: 20 tttgtttc 13
>gb|CF328835.1|CF328835 NACL--03-O21.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--03-O21, mRNA sequence
Length = 543
Score = 69.9 bits (35), Expect = 7e-009
Identities = 72/83 (86%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 518 taagccacacaggtgcggggcggagaaaggactttgaacgagtt-cggccggttgttgaa 576
|||||||||||||| |||||||| |||||||||||||| ||||| ||| ||||||||||
Sbjct: 452 taagccacacaggtacggggcggggaaaggactttgaatgagttagggcgggttgttgaa 511
Query: 577 gttcgtttcgggcacccctggca 599
|| ||||| || || |||||||
Sbjct: 512 atttgtttctggtactcctggca 534
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,022,797
Number of Sequences: 438736
Number of extensions: 4022797
Number of successful extensions: 7471
Number of sequences better than 0.5: 62
Number of HSP's better than 0.5 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7189
Number of HSP's gapped (non-prelim): 241
length of query: 2812
length of database: 2,800,419,916
effective HSP length: 22
effective length of query: 2790
effective length of database: 2,790,767,724
effective search space: 7786241949960
effective search space used: 7786241949960
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)