BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521556.2.1
(1267 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AC130607.2| Oryza sativa (japonica cultivar-group) chrom... 357 1e-095
gb|AACV01012164.1| Oryza sativa (japonica cultivar-group) c... 357 1e-095
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 357 1e-095
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 357 1e-095
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 357 1e-095
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 357 1e-095
gb|D15330.1|D15330 RICC0467A Rice callus Oryza sativa (japo... 276 3e-071
gb|AF402803.1| Oryza sativa (japonica cultivar-group) clone... 206 2e-050
gb|AU064440.1|AU064440 AU064440 Rice panicle shorter than 3... 172 3e-040
gb|AU063609.1|AU063609 AU063609 Rice callus Oryza sativa (j... 125 6e-026
gb|AU063606.1|AU063606 AU063606 Rice callus Oryza sativa (j... 117 2e-023
gb|C72112.1|C72112 C72112 Rice panicle at flowering stage O... 78 1e-011
gb|D16079.1|D16079 RICC2914A Rice callus Oryza sativa (japo... 78 1e-011
gb|AU063277.1|AU063277 AU063277 Rice callus Oryza sativa (j... 78 1e-011
gb|AU063304.1|AU063304 AU063304 Rice callus Oryza sativa (j... 78 1e-011
gb|AU062768.2|AU062768 AU062768 Rice callus Oryza sativa (j... 78 1e-011
dbj|AK103358.1| Oryza sativa (japonica cultivar-group) cDNA... 78 1e-011
dbj|AK105407.1| Oryza sativa (japonica cultivar-group) cDNA... 78 1e-011
gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb00... 78 1e-011
gb|AACV01008044.1| Oryza sativa (japonica cultivar-group) c... 78 1e-011
ref|NT_107187.1| Oryza sativa (japonica cultivar-group) 78 1e-011
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 78 1e-011
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 78 1e-011
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 78 1e-011
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 78 1e-011
gb|AU057225.1|AU057225 AU057225 Oryza sativa mature leaf Ni... 74 2e-010
gb|AU064702.1|AU064702 AU064702 Rice panicle (between 3cm t... 74 2e-010
gb|AU064832.1|AU064832 AU064832 Rice panicle (between 3cm t... 74 2e-010
gb|AU077658.1|AU077658 AU077658 Rice panicle (between 3cm t... 74 2e-010
gb|CB674416.1|CB674416 OSJNEe09H07.f OSJNEe Oryza sativa (j... 74 2e-010
gb|CF290862.1|CF290862 14ROOT--01-B01.b1 Rice root plasmid ... 74 2e-010
gb|CF291218.1|CF291218 14ROOT--01-I24.b1 Rice root plasmid ... 74 2e-010
gb|CF291278.1|CF291278 14ROOT--01-K07.b1 Rice root plasmid ... 74 2e-010
gb|CF291519.1|CF291519 14ROOT--01-P15.g1 Rice root plasmid ... 74 2e-010
gb|CF291931.1|CF291931 14ROOT--02-J01.b1 Rice root plasmid ... 74 2e-010
gb|CF292637.1|CF292637 30DGS--01-I15.b1 Rice leaf plasmid c... 74 2e-010
gb|CF294146.1|CF294146 30DGS--03-J05.b1 Rice leaf plasmid c... 74 2e-010
gb|CF294299.1|CF294299 30DGS--03-M12.b1 Rice leaf plasmid c... 74 2e-010
gb|CF294321.1|CF294321 30DGS--03-M23.b1 Rice leaf plasmid c... 74 2e-010
gb|CF294747.1|CF294747 30DGS--04-G09.b1 Rice leaf plasmid c... 74 2e-010
gb|CF295323.1|CF295323 30DGS--05-D13.b1 Rice leaf plasmid c... 74 2e-010
gb|CF295873.1|CF295873 30DGS--06-A01.g1 Rice leaf plasmid c... 74 2e-010
gb|CF296288.1|CF296288 30DGS--06-J11.b1 Rice leaf plasmid c... 74 2e-010
gb|CF305190.1|CF305190 CLD1--01-A12.b1 Rice cold treated le... 74 2e-010
gb|CF335289.1|CF335289 JMT--04-O15.b1 AtJMT-overexpressing ... 74 2e-010
gb|BP184455.1|BP184455 BP184455 pNS rice panicle cDNA, flow... 74 2e-010
gb|BP184600.1|BP184600 BP184600 pNS rice panicle cDNA, flow... 74 2e-010
gb|BP184989.1|BP184989 BP184989 pNS rice callus cDNA Oryza ... 74 2e-010
dbj|AK060223.1| Oryza sativa (japonica cultivar-group) cDNA... 74 2e-010
dbj|AK061838.1| Oryza sativa (japonica cultivar-group) cDNA... 74 2e-010
dbj|AK099489.1| Oryza sativa (japonica cultivar-group) cDNA... 74 2e-010
dbj|AP005399.3| Oryza sativa (japonica cultivar-group) geno... 74 2e-010
gb|AF402804.1| Oryza sativa (japonica cultivar-group) clone... 74 2e-010
dbj|AP005676.3| Oryza sativa (japonica cultivar-group) geno... 74 2e-010
gb|AACV01020196.1| Oryza sativa (japonica cultivar-group) c... 74 2e-010
ref|XM_450940.1| Oryza sativa (japonica cultivar-group), mRNA 74 2e-010
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 74 2e-010
ref|XM_506667.2| PREDICTED Oryza sativa (japonica cultivar-... 74 2e-010
ref|XM_507428.1| PREDICTED Oryza sativa (japonica cultivar-... 74 2e-010
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 74 2e-010
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 74 2e-010
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 74 2e-010
gb|AU063273.1|AU063273 AU063273 Rice callus Oryza sativa (j... 72 8e-010
gb|AU063463.2|AU063463 AU063463 Rice callus Oryza sativa (j... 72 8e-010
gb|C26393.1|C26393 C26393 Rice callus cDNA Oryza sativa (ja... 68 1e-008
gb|C96616.1|C96616 C96616 Rice callus Oryza sativa (japonic... 66 5e-008
gb|CA755017.1|CA755017 BR030011000_PLATE_A08_57_056.ab1 OA ... 66 5e-008
gb|CF322232.1|CF322232 HD--13-M05.b1 OsHDAC1-overexpressing... 66 5e-008
gb|CV729394.1|CV729394 FLO--02-E06.b1 Rice flower lambda ph... 66 5e-008
gb|C29092.2|C29092 C29092 Rice callus cDNA Oryza sativa (ja... 66 5e-008
gb|C93550.1|C93550 C93550 Rice callus Oryza sativa (japonic... 64 2e-007
gb|CB680229.1|CB680229 OSJNEf04K17.f OSJNEf Oryza sativa (j... 64 2e-007
gb|AU063515.2|AU063515 AU063515 Rice callus Oryza sativa (j... 64 2e-007
dbj|AK069037.1| Oryza sativa (japonica cultivar-group) cDNA... 64 2e-007
dbj|AK107822.1| Oryza sativa (japonica cultivar-group) cDNA... 64 2e-007
dbj|AK109284.1| Oryza sativa (japonica cultivar-group) cDNA... 64 2e-007
dbj|AK121363.1| Oryza sativa (japonica cultivar-group) cDNA... 64 2e-007
gb|AACV01003051.1| Oryza sativa (japonica cultivar-group) c... 64 2e-007
gb|AACV01003052.1| Oryza sativa (japonica cultivar-group) c... 64 2e-007
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
ref|XM_463733.1| Oryza sativa (japonica cultivar-group), p... 64 2e-007
ref|XM_463739.1| Oryza sativa (japonica cultivar-group), p... 64 2e-007
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 64 2e-007
dbj|AP003735.4| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 64 2e-007
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 64 2e-007
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
gb|C73318.1|C73318 C73318 Rice panicle at flowering stage O... 62 8e-007
gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04... 62 8e-007
gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07... 62 8e-007
gb|AACV01021984.1| Oryza sativa (japonica cultivar-group) c... 62 8e-007
ref|NM_197495.1| Oryza sativa (japonica cultivar-group) put... 62 8e-007
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 62 8e-007
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 62 8e-007
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 62 8e-007
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 62 8e-007
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 62 8e-007
gb|AU062883.1|AU062883 AU062883 Rice callus Oryza sativa (j... 60 3e-006
gb|AU069491.1|AU069491 AU069491 Rice callus Oryza sativa (j... 60 3e-006
gb|AU063397.2|AU063397 AU063397 Rice callus Oryza sativa (j... 60 3e-006
gb|CF290923.1|CF290923 14ROOT--01-C10.g1 Rice root plasmid ... 60 3e-006
gb|CF291533.1|CF291533 14ROOT--01-P22.g1 Rice root plasmid ... 60 3e-006
gb|CF291953.1|CF291953 14ROOT--02-J13.b1 Rice root plasmid ... 60 3e-006
gb|CF292764.1|CF292764 30DGS--01-L09.b1 Rice leaf plasmid c... 60 3e-006
gb|CF331397.1|CF331397 NACL--07-I05.b1 Rice callus plasmid ... 60 3e-006
gb|CV723649.1|CV723649 root--04-E24.g1 Rice root lambda pha... 60 3e-006
dbj|AK103316.1| Oryza sativa (japonica cultivar-group) cDNA... 60 3e-006
dbj|AK120037.1| Oryza sativa (japonica cultivar-group) cDNA... 60 3e-006
gb|AF309377.1| Oryza sativa (japonica cultivar-group) clone... 60 3e-006
dbj|AP005525.2| Oryza sativa (japonica cultivar-group) geno... 60 3e-006
dbj|AP005422.3| Oryza sativa (japonica cultivar-group) geno... 60 3e-006
gb|AACV01019786.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
ref|XM_450661.1| Oryza sativa (japonica cultivar-group), mRNA 60 3e-006
ref|XM_506655.1| PREDICTED Oryza sativa (japonica cultivar-... 60 3e-006
ref|NT_107082.1| Oryza sativa (japonica cultivar-group) 60 3e-006
gb|AU063589.1|AU063589 AU063589 Rice callus Oryza sativa (j... 58 1e-005
gb|CV731019.1|CV731019 FLO--04-N17.b1 Rice flower lambda ph... 56 5e-005
gb|AQ688928.1|AQ688928 nbxb0078J07r CUGI Rice BAC Library O... 54 2e-004
gb|D46989.1|D46989 RICS12005A Rice green shoot Oryza sativa... 54 2e-004
gb|AF402800.1| Oryza sativa (japonica cultivar-group) clone... 54 2e-004
ref|NM_197497.1| Oryza sativa (japonica cultivar-group) put... 54 2e-004
gb|AU063590.1|AU063590 AU063590 Rice callus Oryza sativa (j... 52 8e-004
gb|CF312419.1|CF312419 ABF--08-C21.b1 ABF3-overexpressing t... 52 8e-004
gb|AACV01021979.1| Oryza sativa (japonica cultivar-group) c... 52 8e-004
ref|NM_197474.1| Oryza sativa (japonica cultivar-group) put... 52 8e-004
gb|D46686.1|D46686 RICS11517A Rice green shoot Oryza sativa... 50 0.003
gb|D47038.1|D47038 RICS12108A Rice green shoot Oryza sativa... 50 0.003
gb|D47088.1|D47088 RICS12209A Rice green shoot Oryza sativa... 50 0.003
gb|D47119.1|D47119 RICS12258A Rice green shoot Oryza sativa... 50 0.003
gb|D47564.1|D47564 RICS13143A Rice green shoot Oryza sativa... 50 0.003
gb|D47978.1|D47978 RICS13810A Rice green shoot Oryza sativa... 50 0.003
gb|D48239.1|D48239 RICS14359A Rice green shoot Oryza sativa... 50 0.003
gb|C27186.1|C27186 C27186 Rice callus cDNA Oryza sativa (ja... 50 0.003
gb|C29001.1|C29001 C29001 Rice callus cDNA Oryza sativa (ja... 50 0.003
gb|D22910.1|D22910 RICC1756A Rice callus Oryza sativa (japo... 50 0.003
gb|AU089737.1|AU089737 AU089737 Rice green shoot Oryza sati... 50 0.003
gb|CA756299.1|CA756299 BR030039000_PLATE_G02_15_018.ab1 OA ... 50 0.003
gb|CF309507.1|CF309507 ABF--03-L14.g1 ABF3-overexpressing t... 50 0.003
gb|CF332560.1|CF332560 JMT--01-B21.g1 AtJMT-overexpressing ... 50 0.003
gb|CF333605.1|CF333605 JMT--02-J04.b1 AtJMT-overexpressing ... 50 0.003
dbj|AK059726.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK059882.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK060931.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK061436.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK099137.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
dbj|AK106212.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
gb|AF402794.1| Oryza sativa (japonica cultivar-group) clone... 50 0.003
gb|AF402798.1| Oryza sativa (japonica cultivar-group) clone... 50 0.003
gb|AF402801.1| Oryza sativa (japonica cultivar-group) clone... 50 0.003
gb|AF402805.1| Oryza sativa (japonica cultivar-group) clone... 50 0.003
dbj|AP005840.4| Oryza sativa (japonica cultivar-group) geno... 50 0.003
gb|AACV01015249.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01021982.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01021983.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
ref|NM_197480.1| Oryza sativa (japonica cultivar-group) put... 50 0.003
ref|NM_197484.1| Oryza sativa (japonica cultivar-group) put... 50 0.003
ref|XM_476737.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.003
ref|XM_506181.1| PREDICTED Oryza sativa (japonica cultivar-... 50 0.003
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 50 0.003
gb|CH401220.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 50 0.003
gb|D16077.1|D16077 RICC2886A Rice callus Oryza sativa (japo... 48 0.012
gb|CA754695.1|CA754695 BR030004000_PLATE_G02_15_018.ab1 OA ... 48 0.012
gb|CV724487.1|CV724487 14Salt--01-B12.b1 Salt treated rice ... 48 0.012
dbj|AK064612.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.012
ref|XM_463735.1| Oryza sativa (japonica cultivar-group), p... 48 0.012
gb|D24252.1|D24252 RICR1583A Rice root Oryza sativa (japoni... 46 0.047
gb|AU063038.1|AU063038 AU063038 Rice callus Oryza sativa (j... 46 0.047
gb|AU093060.1|AU093060 AU093060 Rice callus Oryza sativa (j... 46 0.047
gb|CV724048.1|CV724048 root--05-K06.g1 Rice root lambda pha... 46 0.047
gb|AU063485.2|AU063485 AU063485 Rice callus Oryza sativa (j... 46 0.047
gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 ... 46 0.047
gb|AACV01007244.1| Oryza sativa (japonica cultivar-group) c... 46 0.047
ref|NM_184820.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.047
ref|NT_107174.1| Oryza sativa (japonica cultivar-group) 46 0.047
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.047
gb|AQ953971.1|AQ953971 nbeb0053B16f CUGI Rice BAC Library (... 44 0.18
gb|BF889435.1|BF889435 EST004 Magnaporthe grisea infected 1... 44 0.18
gb|CF295433.1|CF295433 30DGS--05-G04.b1 Rice leaf plasmid c... 44 0.18
gb|CV723538.1|CV723538 root--03-O05.g1 Rice root lambda pha... 44 0.18
dbj|AK108376.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.18
ref|NM_197473.1| Oryza sativa (japonica cultivar-group) put... 44 0.18
ref|XM_463734.1| Oryza sativa (japonica cultivar-group), p... 44 0.18
>gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0017D10,
complete sequence
Length = 149870
Score = 357 bits (180), Expect = 1e-095
Identities = 270/300 (90%)
Strand = Plus / Minus
Query: 91 gctgatgctgttcgggtcgtgggcgagctcgtacacgcaccgcgtgcagctggcgctgcg 150
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 47702 gctgaagctgttcgggtcgtgggcgagctcgtacacgcaccgggtgcagctggcgctgcg 47643
Query: 151 gctcaagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagct 210
|||||||| |||||||||| |||| ||||||||||| || ||||||||||| | |||
Sbjct: 47642 gctcaaggcgctggagttcgtgtacgccgaggaggacctcggcaacaagagcgaggcgct 47583
Query: 211 gctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgcgct 270
|||||||| |||||| || ||||||||||| ||||||||||||||| |||||||| ||||
Sbjct: 47582 gctgcgcctcaacccggtgcacaagaaggtccccgtgctcgtccaccgcggccgcccgct 47523
Query: 271 cccggagtccgtcattatcctccagtaccttgacgacgcctggccggagacccgcccgct 330
| | ||||||||||| |||||||||||||| ||||||||||||||||||| |||||| ||
Sbjct: 47522 cgccgagtccgtcatcatcctccagtacctcgacgacgcctggccggagagccgccccct 47463
Query: 331 gctccccgccgacgccttcgaccgcgcgctcgcgcggttctggtgccacttcgccgacga 390
|||||| ||||| ||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 47462 cctcccctccgaccccttcgaccgcgccctcgctcgcttctggtgccacttcgccgacga 47403
Score = 327 bits (165), Expect = 9e-087
Identities = 310/357 (86%), Gaps = 1/357 (0%)
Strand = Plus / Minus
Query: 393 agctcgggccggcggtgggcacggtgttcgcgtcgacgggggaggaccaggaggcggcgg 452
|||| |||||||||||||| |||||||||||| ||||||| ||| |||||||||||||
Sbjct: 47330 agcttgggccggcggtgggggcggtgttcgcgttgacggggagggagcaggaggcggcgg 47271
Query: 453 tgcgccaggtgcacgagaacctggccctgatcgagtccgagctccgcgacggcgcgttcc 512
||| ||||||||||| |||||||| ||| | ||| | |||||||| || || ||||||
Sbjct: 47270 tgcagcaggtgcacgacaacctggcgctgctggaggcggagctccgggagggggcgttca 47211
Query: 513 ggggccgccgcttcttcggcggcgacgaggtgggcctgctggacgtcgtcctgggctgcg 572
||| || | ||||||||||||||| |||||||||| || |||||||| || || ||||
Sbjct: 47210 aggggcggaggttcttcggcggcgaccaggtgggcctcctcgacgtcgtgctcgggtgcg 47151
Query: 573 gctcctactggctcgccgtgttcgaggaggtgaccggggtgcgctctcgtggacgccgac 632
||||||||||||| ||||||||||||||||| ||||| |||||| |||||||||||||||
Sbjct: 47150 gctcctactggctggccgtgttcgaggaggtcaccggcgtgcgc-ctcgtggacgccgac 47092
Query: 633 gccttcccgcgcttccacgcctggctgcgcgacttcgaggccctggacgaggtccgggag 692
|| ||||||| ||||||||| ||||| |||||||||||||||| ||| |||||| ||||
Sbjct: 47091 gcgttcccgctcttccacgcgtggctccgcgacttcgaggcccaggaggaggtcaaggag 47032
Query: 693 accatccccgcggtggaccgcctgctcgagtacgcgcgcggcctccgccacatgctg 749
||||||||| | || |||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 47031 accatcccctccgtcgaccgcctgctcgagtacgcccgcggcctccgccagatgctg 46975
>gb|AACV01012164.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012164, whole
genome shotgun sequence
Length = 41436
Score = 357 bits (180), Expect = 1e-095
Identities = 270/300 (90%)
Strand = Plus / Plus
Query: 91 gctgatgctgttcgggtcgtgggcgagctcgtacacgcaccgcgtgcagctggcgctgcg 150
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 21928 gctgaagctgttcgggtcgtgggcgagctcgtacacgcaccgggtgcagctggcgctgcg 21987
Query: 151 gctcaagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagct 210
|||||||| |||||||||| |||| ||||||||||| || ||||||||||| | |||
Sbjct: 21988 gctcaaggcgctggagttcgtgtacgccgaggaggacctcggcaacaagagcgaggcgct 22047
Query: 211 gctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgcgct 270
|||||||| |||||| || ||||||||||| ||||||||||||||| |||||||| ||||
Sbjct: 22048 gctgcgcctcaacccggtgcacaagaaggtccccgtgctcgtccaccgcggccgcccgct 22107
Query: 271 cccggagtccgtcattatcctccagtaccttgacgacgcctggccggagacccgcccgct 330
| | ||||||||||| |||||||||||||| ||||||||||||||||||| |||||| ||
Sbjct: 22108 cgccgagtccgtcatcatcctccagtacctcgacgacgcctggccggagagccgccccct 22167
Query: 331 gctccccgccgacgccttcgaccgcgcgctcgcgcggttctggtgccacttcgccgacga 390
|||||| ||||| ||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 22168 cctcccctccgaccccttcgaccgcgccctcgctcgcttctggtgccacttcgccgacga 22227
Score = 281 bits (142), Expect = 5e-073
Identities = 306/358 (85%), Gaps = 2/358 (0%)
Strand = Plus / Plus
Query: 393 agctcgggccggcggtgggcacggtgttcgcgtcgacgggggaggaccaggaggcggcgg 452
|||| |||||||||||||| |||||||||||| ||||||| ||| |||||||||||||
Sbjct: 22300 agcttgggccggcggtgggggcggtgttcgcgttgacggggagggagcaggaggcggcgg 22359
Query: 453 tgcgccaggtgcacgagaacctggccctgatcgagtccgagctccgcgacggcgcgttcc 512
||| ||||||||||| |||||||| ||| | ||| | |||||||| || || ||||||
Sbjct: 22360 tgcagcaggtgcacgacaacctggcgctgctggaggcggagctccgggagggggcgttca 22419
Query: 513 ggggccgccgcttcttcggcggcgacgaggtgggcctgctggacgtcgtcctgggctgcg 572
||| || | ||||||||||||||| | |||||||| || |||||||| || ||||
Sbjct: 22420 aggggcggaggttcttcggcggcgaccacgtgggcctcctcgacgtcgtgctcccgtgcg 22479
Query: 573 gctcctactggctcgccgtgttcgaggaggtgaccggggtgcgctctcgtggacgccgac 632
||||||||||||| ||||||||||||||||| ||||| |||||| |||||||||||||||
Sbjct: 22480 gctcctactggctggccgtgttcgaggaggtcaccggcgtgcgc-ctcgtggacgccgac 22538
Query: 633 gccttcccgcgcttccacgcctggctgcgc-gacttcgaggccctggacgaggtccggga 691
|| || |||| ||||||||| ||||| ||| ||||||||||||| ||| |||||| |||
Sbjct: 22539 gcgtttccgctcttccacgcgtggctccgccgacttcgaggcccaggaggaggtcaagga 22598
Query: 692 gaccatccccgcggtggaccgcctgctcgagtacgcgcgcggcctccgccacatgctg 749
|||||||||| | || |||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 22599 gaccatcccctccgtcgaccgcctgctcgagtacgcccgcggcctccgccagatgctg 22656
>ref|NT_107212.1| Oryza sativa (japonica cultivar-group)
Length = 2712182
Score = 357 bits (180), Expect = 1e-095
Identities = 270/300 (90%)
Strand = Plus / Minus
Query: 91 gctgatgctgttcgggtcgtgggcgagctcgtacacgcaccgcgtgcagctggcgctgcg 150
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1354772 gctgaagctgttcgggtcgtgggcgagctcgtacacgcaccgggtgcagctggcgctgcg 1354713
Query: 151 gctcaagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagct 210
|||||||| |||||||||| |||| ||||||||||| || ||||||||||| | |||
Sbjct: 1354712 gctcaaggcgctggagttcgtgtacgccgaggaggacctcggcaacaagagcgaggcgct 1354653
Query: 211 gctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgcgct 270
|||||||| |||||| || ||||||||||| ||||||||||||||| |||||||| ||||
Sbjct: 1354652 gctgcgcctcaacccggtgcacaagaaggtccccgtgctcgtccaccgcggccgcccgct 1354593
Query: 271 cccggagtccgtcattatcctccagtaccttgacgacgcctggccggagacccgcccgct 330
| | ||||||||||| |||||||||||||| ||||||||||||||||||| |||||| ||
Sbjct: 1354592 cgccgagtccgtcatcatcctccagtacctcgacgacgcctggccggagagccgccccct 1354533
Query: 331 gctccccgccgacgccttcgaccgcgcgctcgcgcggttctggtgccacttcgccgacga 390
|||||| ||||| ||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 1354532 cctcccctccgaccccttcgaccgcgccctcgctcgcttctggtgccacttcgccgacga 1354473
Score = 327 bits (165), Expect = 9e-087
Identities = 310/357 (86%), Gaps = 1/357 (0%)
Strand = Plus / Minus
Query: 393 agctcgggccggcggtgggcacggtgttcgcgtcgacgggggaggaccaggaggcggcgg 452
|||| |||||||||||||| |||||||||||| ||||||| ||| |||||||||||||
Sbjct: 1354400 agcttgggccggcggtgggggcggtgttcgcgttgacggggagggagcaggaggcggcgg 1354341
Query: 453 tgcgccaggtgcacgagaacctggccctgatcgagtccgagctccgcgacggcgcgttcc 512
||| ||||||||||| |||||||| ||| | ||| | |||||||| || || ||||||
Sbjct: 1354340 tgcagcaggtgcacgacaacctggcgctgctggaggcggagctccgggagggggcgttca 1354281
Query: 513 ggggccgccgcttcttcggcggcgacgaggtgggcctgctggacgtcgtcctgggctgcg 572
||| || | ||||||||||||||| |||||||||| || |||||||| || || ||||
Sbjct: 1354280 aggggcggaggttcttcggcggcgaccaggtgggcctcctcgacgtcgtgctcgggtgcg 1354221
Query: 573 gctcctactggctcgccgtgttcgaggaggtgaccggggtgcgctctcgtggacgccgac 632
||||||||||||| ||||||||||||||||| ||||| |||||| |||||||||||||||
Sbjct: 1354220 gctcctactggctggccgtgttcgaggaggtcaccggcgtgcgc-ctcgtggacgccgac 1354162
Query: 633 gccttcccgcgcttccacgcctggctgcgcgacttcgaggccctggacgaggtccgggag 692
|| ||||||| ||||||||| ||||| |||||||||||||||| ||| |||||| ||||
Sbjct: 1354161 gcgttcccgctcttccacgcgtggctccgcgacttcgaggcccaggaggaggtcaaggag 1354102
Query: 693 accatccccgcggtggaccgcctgctcgagtacgcgcgcggcctccgccacatgctg 749
||||||||| | || |||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 1354101 accatcccctccgtcgaccgcctgctcgagtacgcccgcggcctccgccagatgctg 1354045
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 357 bits (180), Expect = 1e-095
Identities = 270/300 (90%)
Strand = Plus / Minus
Query: 91 gctgatgctgttcgggtcgtgggcgagctcgtacacgcaccgcgtgcagctggcgctgcg 150
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2417169 gctgaagctgttcgggtcgtgggcgagctcgtacacgcaccgggtgcagctggcgctgcg 2417110
Query: 151 gctcaagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagct 210
|||||||| |||||||||| |||| ||||||||||| || ||||||||||| | |||
Sbjct: 2417109 gctcaaggcgctggagttcgtgtacgccgaggaggacctcggcaacaagagcgaggcgct 2417050
Query: 211 gctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgcgct 270
|||||||| |||||| || ||||||||||| ||||||||||||||| |||||||| ||||
Sbjct: 2417049 gctgcgcctcaacccggtgcacaagaaggtccccgtgctcgtccaccgcggccgcccgct 2416990
Query: 271 cccggagtccgtcattatcctccagtaccttgacgacgcctggccggagacccgcccgct 330
| | ||||||||||| |||||||||||||| ||||||||||||||||||| |||||| ||
Sbjct: 2416989 cgccgagtccgtcatcatcctccagtacctcgacgacgcctggccggagagccgccccct 2416930
Query: 331 gctccccgccgacgccttcgaccgcgcgctcgcgcggttctggtgccacttcgccgacga 390
|||||| ||||| ||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 2416929 cctcccctccgaccccttcgaccgcgccctcgctcgcttctggtgccacttcgccgacga 2416870
Score = 281 bits (142), Expect = 5e-073
Identities = 306/358 (85%), Gaps = 2/358 (0%)
Strand = Plus / Minus
Query: 393 agctcgggccggcggtgggcacggtgttcgcgtcgacgggggaggaccaggaggcggcgg 452
|||| |||||||||||||| |||||||||||| ||||||| ||| |||||||||||||
Sbjct: 2416797 agcttgggccggcggtgggggcggtgttcgcgttgacggggagggagcaggaggcggcgg 2416738
Query: 453 tgcgccaggtgcacgagaacctggccctgatcgagtccgagctccgcgacggcgcgttcc 512
||| ||||||||||| |||||||| ||| | ||| | |||||||| || || ||||||
Sbjct: 2416737 tgcagcaggtgcacgacaacctggcgctgctggaggcggagctccgggagggggcgttca 2416678
Query: 513 ggggccgccgcttcttcggcggcgacgaggtgggcctgctggacgtcgtcctgggctgcg 572
||| || | ||||||||||||||| | |||||||| || |||||||| || ||||
Sbjct: 2416677 aggggcggaggttcttcggcggcgaccacgtgggcctcctcgacgtcgtgctcccgtgcg 2416618
Query: 573 gctcctactggctcgccgtgttcgaggaggtgaccggggtgcgctctcgtggacgccgac 632
||||||||||||| ||||||||||||||||| ||||| |||||| |||||||||||||||
Sbjct: 2416617 gctcctactggctggccgtgttcgaggaggtcaccggcgtgcgc-ctcgtggacgccgac 2416559
Query: 633 gccttcccgcgcttccacgcctggctgcgc-gacttcgaggccctggacgaggtccggga 691
|| || |||| ||||||||| ||||| ||| ||||||||||||| ||| |||||| |||
Sbjct: 2416558 gcgtttccgctcttccacgcgtggctccgccgacttcgaggcccaggaggaggtcaagga 2416499
Query: 692 gaccatccccgcggtggaccgcctgctcgagtacgcgcgcggcctccgccacatgctg 749
|||||||||| | || |||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 2416498 gaccatcccctccgtcgaccgcctgctcgagtacgcccgcggcctccgccagatgctg 2416441
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 357 bits (180), Expect = 1e-095
Identities = 270/300 (90%)
Strand = Plus / Minus
Query: 91 gctgatgctgttcgggtcgtgggcgagctcgtacacgcaccgcgtgcagctggcgctgcg 150
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 19717482 gctgaagctgttcgggtcgtgggcgagctcgtacacgcaccgggtgcagctggcgctgcg 19717423
Query: 151 gctcaagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagct 210
|||||||| |||||||||| |||| ||||||||||| || ||||||||||| | |||
Sbjct: 19717422 gctcaaggcgctggagttcgtgtacgccgaggaggacctcggcaacaagagcgaggcgct 19717363
Query: 211 gctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgcgct 270
|||||||| |||||| || ||||||||||| ||||||||||||||| |||||||| ||||
Sbjct: 19717362 gctgcgcctcaacccggtgcacaagaaggtccccgtgctcgtccaccgcggccgcccgct 19717303
Query: 271 cccggagtccgtcattatcctccagtaccttgacgacgcctggccggagacccgcccgct 330
| | ||||||||||| |||||||||||||| ||||||||||||||||||| |||||| ||
Sbjct: 19717302 cgccgagtccgtcatcatcctccagtacctcgacgacgcctggccggagagccgccccct 19717243
Query: 331 gctccccgccgacgccttcgaccgcgcgctcgcgcggttctggtgccacttcgccgacga 390
|||||| ||||| ||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 19717242 cctcccctccgaccccttcgaccgcgccctcgctcgcttctggtgccacttcgccgacga 19717183
Score = 281 bits (142), Expect = 5e-073
Identities = 306/358 (85%), Gaps = 2/358 (0%)
Strand = Plus / Minus
Query: 393 agctcgggccggcggtgggcacggtgttcgcgtcgacgggggaggaccaggaggcggcgg 452
|||| |||||||||||||| |||||||||||| ||||||| ||| |||||||||||||
Sbjct: 19717110 agcttgggccggcggtgggggcggtgttcgcgttgacggggagggagcaggaggcggcgg 19717051
Query: 453 tgcgccaggtgcacgagaacctggccctgatcgagtccgagctccgcgacggcgcgttcc 512
||| ||||||||||| |||||||| ||| | ||| | |||||||| || || ||||||
Sbjct: 19717050 tgcagcaggtgcacgacaacctggcgctgctggaggcggagctccgggagggggcgttca 19716991
Query: 513 ggggccgccgcttcttcggcggcgacgaggtgggcctgctggacgtcgtcctgggctgcg 572
||| || | ||||||||||||||| | |||||||| || |||||||| || ||||
Sbjct: 19716990 aggggcggaggttcttcggcggcgaccacgtgggcctcctcgacgtcgtgctcccgtgcg 19716931
Query: 573 gctcctactggctcgccgtgttcgaggaggtgaccggggtgcgctctcgtggacgccgac 632
||||||||||||| ||||||||||||||||| ||||| |||||| |||||||||||||||
Sbjct: 19716930 gctcctactggctggccgtgttcgaggaggtcaccggcgtgcgc-ctcgtggacgccgac 19716872
Query: 633 gccttcccgcgcttccacgcctggctgcgc-gacttcgaggccctggacgaggtccggga 691
|| || |||| ||||||||| ||||| ||| ||||||||||||| ||| |||||| |||
Sbjct: 19716871 gcgtttccgctcttccacgcgtggctccgccgacttcgaggcccaggaggaggtcaagga 19716812
Query: 692 gaccatccccgcggtggaccgcctgctcgagtacgcgcgcggcctccgccacatgctg 749
|||||||||| | || |||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 19716811 gaccatcccctccgtcgaccgcctgctcgagtacgcccgcggcctccgccagatgctg 19716754
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 357 bits (180), Expect = 1e-095
Identities = 270/300 (90%)
Strand = Plus / Minus
Query: 91 gctgatgctgttcgggtcgtgggcgagctcgtacacgcaccgcgtgcagctggcgctgcg 150
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 20049377 gctgaagctgttcgggtcgtgggcgagctcgtacacgcaccgggtgcagctggcgctgcg 20049318
Query: 151 gctcaagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagct 210
|||||||| |||||||||| |||| ||||||||||| || ||||||||||| | |||
Sbjct: 20049317 gctcaaggcgctggagttcgtgtacgccgaggaggacctcggcaacaagagcgaggcgct 20049258
Query: 211 gctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgcgct 270
|||||||| |||||| || ||||||||||| ||||||||||||||| |||||||| ||||
Sbjct: 20049257 gctgcgcctcaacccggtgcacaagaaggtccccgtgctcgtccaccgcggccgcccgct 20049198
Query: 271 cccggagtccgtcattatcctccagtaccttgacgacgcctggccggagacccgcccgct 330
| | ||||||||||| |||||||||||||| ||||||||||||||||||| |||||| ||
Sbjct: 20049197 cgccgagtccgtcatcatcctccagtacctcgacgacgcctggccggagagccgccccct 20049138
Query: 331 gctccccgccgacgccttcgaccgcgcgctcgcgcggttctggtgccacttcgccgacga 390
|||||| ||||| ||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 20049137 cctcccctccgaccccttcgaccgcgccctcgctcgcttctggtgccacttcgccgacga 20049078
Score = 327 bits (165), Expect = 9e-087
Identities = 310/357 (86%), Gaps = 1/357 (0%)
Strand = Plus / Minus
Query: 393 agctcgggccggcggtgggcacggtgttcgcgtcgacgggggaggaccaggaggcggcgg 452
|||| |||||||||||||| |||||||||||| ||||||| ||| |||||||||||||
Sbjct: 20049005 agcttgggccggcggtgggggcggtgttcgcgttgacggggagggagcaggaggcggcgg 20048946
Query: 453 tgcgccaggtgcacgagaacctggccctgatcgagtccgagctccgcgacggcgcgttcc 512
||| ||||||||||| |||||||| ||| | ||| | |||||||| || || ||||||
Sbjct: 20048945 tgcagcaggtgcacgacaacctggcgctgctggaggcggagctccgggagggggcgttca 20048886
Query: 513 ggggccgccgcttcttcggcggcgacgaggtgggcctgctggacgtcgtcctgggctgcg 572
||| || | ||||||||||||||| |||||||||| || |||||||| || || ||||
Sbjct: 20048885 aggggcggaggttcttcggcggcgaccaggtgggcctcctcgacgtcgtgctcgggtgcg 20048826
Query: 573 gctcctactggctcgccgtgttcgaggaggtgaccggggtgcgctctcgtggacgccgac 632
||||||||||||| ||||||||||||||||| ||||| |||||| |||||||||||||||
Sbjct: 20048825 gctcctactggctggccgtgttcgaggaggtcaccggcgtgcgc-ctcgtggacgccgac 20048767
Query: 633 gccttcccgcgcttccacgcctggctgcgcgacttcgaggccctggacgaggtccgggag 692
|| ||||||| ||||||||| ||||| |||||||||||||||| ||| |||||| ||||
Sbjct: 20048766 gcgttcccgctcttccacgcgtggctccgcgacttcgaggcccaggaggaggtcaaggag 20048707
Query: 693 accatccccgcggtggaccgcctgctcgagtacgcgcgcggcctccgccacatgctg 749
||||||||| | || |||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 20048706 accatcccctccgtcgaccgcctgctcgagtacgcccgcggcctccgccagatgctg 20048650
>gb|D15330.1|D15330 RICC0467A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C0467A, mRNA sequence
Length = 353
Score = 276 bits (139), Expect = 3e-071
Identities = 281/328 (85%), Gaps = 1/328 (0%)
Strand = Plus / Plus
Query: 399 ggccggcggtgggcacggtgttcgcgtcgacgggggaggaccaggaggcggcggtgcgcc 458
||||||||||||| |||||||||||| ||||||| ||| |||||||||||||||| |
Sbjct: 1 ggccggcggtgggggcggtgttcgcgttgacggggagggagcaggaggcggcggtgcagc 60
Query: 459 aggtgcacgagaacctggccctgatcgagtccgagctccgcgacggcgcgttccggggcc 518
|||||||||| |||||||| ||| | ||| | |||||||| || || |||||| ||| |
Sbjct: 61 aggtgcacgacaacctggcgctgctggaggcggagctccgggagggggcgttcaaggggc 120
Query: 519 gccgcttcttcggcggcgacgaggtgggcctgctggacgtcgtcctgggctgcggctcct 578
| | ||||||||||||||| |||||||||| || |||||||| || || ||||||||||
Sbjct: 121 ggaggttcttcggcggcgaccaggtgggcctcctcgacgtcgtgctcgggtgcggctcct 180
Query: 579 actggctcgccgtgttcgaggaggtgaccggggtgcgctctcgtggacgccgacgccttc 638
||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||||| |||
Sbjct: 181 actggctggccgtgttcgaggaggtcaccggcgtgcgc-ctcgtggacgccgacgcgttc 239
Query: 639 ccgcgcttccacgcctggctgcgcgacttcgaggccctggacgaggtccgggagaccatc 698
|||| ||||||||| ||||| |||||||||||||||| ||| |||||| |||||||||
Sbjct: 240 ccgctcttccacgcgtggctccgcgacttcgaggcccaggaggaggtcaaggagaccatn 299
Query: 699 cccgcggtggaccgcctgctcgagtacg 726
||| || ||||| |||||||||||||
Sbjct: 300 ccctncgtcgaccgnctgctcgagtacg 327
>gb|AF402803.1| Oryza sativa (japonica cultivar-group) clone E30945_1A putative
glutathione S-transferase OsGSTU16 mRNA, partial cds
Length = 331
Score = 206 bits (104), Expect = 2e-050
Identities = 155/172 (90%)
Strand = Plus / Plus
Query: 91 gctgatgctgttcgggtcgtgggcgagctcgtacacgcaccgcgtgcagctggcgctgcg 150
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 160 gctgaagctgttcgggtcgtgggcgagctcgtacacgcaccgggtgcagctggcgctgcg 219
Query: 151 gctcaagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagct 210
|||||||| |||||||||| |||| ||||||||||| || ||||||||||| | |||
Sbjct: 220 gctcaaggcgctggagttcgtgtacgccgaggaggacctcggcaacaagagcgaggcgct 279
Query: 211 gctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcggc 262
|||||||| |||||| || ||||||||||| ||||||||||||||| |||||
Sbjct: 280 gctgcgcctcaacccggtgcacaagaaggtccccgtgctcgtccaccgcggc 331
>gb|AU064440.1|AU064440 AU064440 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30945_1A, mRNA sequence
Length = 313
Score = 172 bits (87), Expect = 3e-040
Identities = 147/166 (88%), Gaps = 1/166 (0%)
Strand = Plus / Plus
Query: 91 gctgatgctgttcgggtcgtgggcgagctcgtacacgcaccgcgtgcagctggcgctgcg 150
||||| ||||| |||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 149 gctgaagctgtacgggtcgtgggcgagcncgtacacgcaccgggtgcagctggcgctgcg 208
Query: 151 gctcaagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagct 210
|||||||| |||||||||| |||| ||||||||||| || ||||||||||| | |||
Sbjct: 209 gctcaaggcgctggagttcgtgtacgccgaggaggacctcggcaacaagagcgaggcgct 268
Query: 211 gctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccac 256
||||| || |||||| || ||||||||||| |||||||||||||||
Sbjct: 269 gctgc-cctcaacccggtgcacaagaaggtccccgtgctcgtccac 313
>gb|AU063609.1|AU063609 AU063609 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C63124_1A, mRNA sequence
Length = 258
Score = 125 bits (63), Expect = 6e-026
Identities = 110/125 (88%), Gaps = 1/125 (0%)
Strand = Plus / Plus
Query: 91 gctgatgctgttcgggtcgtgggcgagctcgtacacgcaccgcgtgcagctggcgctgcg 150
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 132 gctgaagctgttcgggtcgtgggcgagctcgtacacgcaccgggtgcagctggcgct-cg 190
Query: 151 gctcaagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagct 210
|||||||| |||||||||| |||| ||||||||||| | |||||||||| | |||
Sbjct: 191 gctcaaggcgctggagttcgtgtacgccgaggaggacctcgnanacaagagcgaggcgct 250
Query: 211 gctgc 215
|||||
Sbjct: 251 gctgc 255
>gb|AU063606.1|AU063606 AU063606 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C63109_1A, mRNA sequence
Length = 258
Score = 117 bits (59), Expect = 2e-023
Identities = 90/99 (90%), Gaps = 1/99 (1%)
Strand = Plus / Plus
Query: 91 gctgatgctgttcgggtcgtgggcgagctcgtacacgcaccgcgtgcagctggcgctgcg 150
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 132 gctgaagctgttcgggtcgtgggcgagctcgtacacgcaccgggtgcagctggcgct-cg 190
Query: 151 gctcaagggcctggagttcgactacgtggaggaggacct 189
|||||||| |||||||||| |||| |||||||||||
Sbjct: 191 gctcaaggcgctggagttcgtgtacgccgaggaggacct 229
>gb|C72112.1|C72112 C72112 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1013_1A, mRNA sequence
Length = 407
Score = 77.8 bits (39), Expect = 1e-011
Identities = 126/155 (81%)
Strand = Plus / Plus
Query: 155 aagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagctgctg 214
||||| ||||||||||| ||| ||||||||||| || |||||||||||| || ||
Sbjct: 115 aaggggctggagttcgagtaccgcgaggaggacctcggcaacaagagcgacctcctcctc 174
Query: 215 cgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgcgctcccg 274
||| |||||||||||||| |||| | ||||| ||| |||||| ||||||| | || |
Sbjct: 175 cgctccaaccccgtccacaggaagatccccgtcctcctccacgccggccgccccgtctcc 234
Query: 275 gagtccgtcattatcctccagtaccttgacgacgc 309
|||||| || | |||||||||||||| ||||||||
Sbjct: 235 gagtccctcgtcatcctccagtacctcgacgacgc 269
>gb|D16079.1|D16079 RICC2914A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2914A, mRNA sequence
Length = 285
Score = 77.8 bits (39), Expect = 1e-011
Identities = 126/155 (81%)
Strand = Plus / Plus
Query: 155 aagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagctgctg 214
||||| ||||||||||| ||| ||||||||||| || |||||||||||| || ||
Sbjct: 117 aaggggctggagttcgagtaccgcgaggaggacctcggcaacaagagcgacctcctcctc 176
Query: 215 cgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgcgctcccg 274
||| |||||||||||||| |||| | ||||| ||| |||||| ||||||| | || |
Sbjct: 177 cgctccaaccccgtccacaggaagatccccgtcctcctccacgccggccgccccgtctcc 236
Query: 275 gagtccgtcattatcctccagtaccttgacgacgc 309
|||||| || | |||||||||||||| ||||||||
Sbjct: 237 gagtccctcgtcatcctccagtacctcgacgacgc 271
>gb|AU063277.1|AU063277 AU063277 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C60252_1A, mRNA sequence
Length = 332
Score = 77.8 bits (39), Expect = 1e-011
Identities = 126/155 (81%)
Strand = Plus / Plus
Query: 155 aagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagctgctg 214
||||| ||||||||||| ||| ||||||||||| || |||||||||||| || ||
Sbjct: 115 aaggggctggagttcgagtaccgcgaggaggacctcggcaacaagagcgacctcctcctc 174
Query: 215 cgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgcgctcccg 274
||| |||||||||||||| |||| | ||||| ||| |||||| ||||||| | || |
Sbjct: 175 cgctccaaccccgtccacaggaagatccccgtcctcctccacgccggccgccccgtctcc 234
Query: 275 gagtccgtcattatcctccagtaccttgacgacgc 309
|||||| || | |||||||||||||| ||||||||
Sbjct: 235 gagtccctcgtcatcctccagtacctcgacgacgc 269
>gb|AU063304.1|AU063304 AU063304 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C60610_1A, mRNA sequence
Length = 334
Score = 77.8 bits (39), Expect = 1e-011
Identities = 126/155 (81%)
Strand = Plus / Plus
Query: 155 aagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagctgctg 214
||||| ||||||||||| ||| ||||||||||| || |||||||||||| || ||
Sbjct: 115 aaggggctggagttcgagtaccgcgaggaggacctcggcaacaagagcgacctcctcctc 174
Query: 215 cgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgcgctcccg 274
||| |||||||||||||| |||| | ||||| ||| |||||| ||||||| | || |
Sbjct: 175 cgctccaaccccgtccacaggaagatccccgtcctcctccacgccggccgccccgtctcc 234
Query: 275 gagtccgtcattatcctccagtaccttgacgacgc 309
|||||| || | |||||||||||||| ||||||||
Sbjct: 235 gagtccctcgtcatcctccagtacctcgacgacgc 269
>gb|AU062768.2|AU062768 AU062768 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C50023_1A, mRNA sequence
Length = 289
Score = 77.8 bits (39), Expect = 1e-011
Identities = 126/155 (81%)
Strand = Plus / Plus
Query: 155 aagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagctgctg 214
||||| ||||||||||| ||| ||||||||||| || |||||||||||| || ||
Sbjct: 117 aaggggctggagttcgagtaccgcgaggaggacctcggcaacaagagcgacctcctcctc 176
Query: 215 cgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgcgctcccg 274
||| |||||||||||||| |||| | ||||| ||| |||||| ||||||| | || |
Sbjct: 177 cgctccaaccccgtccacaggaagatccccgtcctcctccacgccggccgccccgtctcc 236
Query: 275 gagtccgtcattatcctccagtaccttgacgacgc 309
|||||| || | |||||||||||||| ||||||||
Sbjct: 237 gagtccctcgtcatcctccagtacctcgacgacgc 271
>dbj|AK103358.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126L16, full
insert sequence
Length = 944
Score = 77.8 bits (39), Expect = 1e-011
Identities = 126/155 (81%)
Strand = Plus / Plus
Query: 155 aagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagctgctg 214
||||| ||||||||||| ||| ||||||||||| || |||||||||||| || ||
Sbjct: 133 aaggggctggagttcgagtaccgcgaggaggacctcggcaacaagagcgacctcctcctc 192
Query: 215 cgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgcgctcccg 274
||| |||||||||||||| |||| | ||||| ||| |||||| ||||||| | || |
Sbjct: 193 cgctccaaccccgtccacaggaagatccccgtcctcctccacgccggccgccccgtctcc 252
Query: 275 gagtccgtcattatcctccagtaccttgacgacgc 309
|||||| || | |||||||||||||| ||||||||
Sbjct: 253 gagtccctcgtcatcctccagtacctcgacgacgc 287
>dbj|AK105407.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-F01, full
insert sequence
Length = 2644
Score = 77.8 bits (39), Expect = 1e-011
Identities = 126/155 (81%)
Strand = Plus / Plus
Query: 155 aagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagctgctg 214
||||| ||||||||||| ||| ||||||||||| || |||||||||||| || ||
Sbjct: 1813 aaggggctggagttcgagtaccgcgaggaggacctcggcaacaagagcgacctcctcctc 1872
Query: 215 cgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgcgctcccg 274
||| |||||||||||||| |||| | ||||| ||| |||||| ||||||| | || |
Sbjct: 1873 cgctccaaccccgtccacaggaagatccccgtcctcctccacgccggccgccccgtctcc 1932
Query: 275 gagtccgtcattatcctccagtaccttgacgacgc 309
|||||| || | |||||||||||||| ||||||||
Sbjct: 1933 gagtccctcgtcatcctccagtacctcgacgacgc 1967
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence
Length = 102751
Score = 77.8 bits (39), Expect = 1e-011
Identities = 126/155 (81%)
Strand = Plus / Minus
Query: 155 aagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagctgctg 214
||||| ||||||||||| ||| ||||||||||| || |||||||||||| || ||
Sbjct: 49918 aaggggctggagttcgagtaccgcgaggaggacctcggcaacaagagcgacctcctcctc 49859
Query: 215 cgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgcgctcccg 274
||| |||||||||||||| |||| | ||||| ||| |||||| ||||||| | || |
Sbjct: 49858 cgctccaaccccgtccacaggaagatccccgtcctcctccacgccggccgccccgtctcc 49799
Query: 275 gagtccgtcattatcctccagtaccttgacgacgc 309
|||||| || | |||||||||||||| ||||||||
Sbjct: 49798 gagtccctcgtcatcctccagtacctcgacgacgc 49764
>gb|AACV01008044.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg008044, whole
genome shotgun sequence
Length = 45794
Score = 77.8 bits (39), Expect = 1e-011
Identities = 126/155 (81%)
Strand = Plus / Plus
Query: 155 aagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagctgctg 214
||||| ||||||||||| ||| ||||||||||| || |||||||||||| || ||
Sbjct: 27922 aaggggctggagttcgagtaccgcgaggaggacctcggcaacaagagcgacctcctcctc 27981
Query: 215 cgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgcgctcccg 274
||| |||||||||||||| |||| | ||||| ||| |||||| ||||||| | || |
Sbjct: 27982 cgctccaaccccgtccacaggaagatccccgtcctcctccacgccggccgccccgtctcc 28041
Query: 275 gagtccgtcattatcctccagtaccttgacgacgc 309
|||||| || | |||||||||||||| ||||||||
Sbjct: 28042 gagtccctcgtcatcctccagtacctcgacgacgc 28076
>ref|NT_107187.1| Oryza sativa (japonica cultivar-group)
Length = 2541880
Score = 77.8 bits (39), Expect = 1e-011
Identities = 126/155 (81%)
Strand = Plus / Minus
Query: 155 aagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagctgctg 214
||||| ||||||||||| ||| ||||||||||| || |||||||||||| || ||
Sbjct: 1495535 aaggggctggagttcgagtaccgcgaggaggacctcggcaacaagagcgacctcctcctc 1495476
Query: 215 cgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgcgctcccg 274
||| |||||||||||||| |||| | ||||| ||| |||||| ||||||| | || |
Sbjct: 1495475 cgctccaaccccgtccacaggaagatccccgtcctcctccacgccggccgccccgtctcc 1495416
Query: 275 gagtccgtcattatcctccagtaccttgacgacgc 309
|||||| || | |||||||||||||| ||||||||
Sbjct: 1495415 gagtccctcgtcatcctccagtacctcgacgacgc 1495381
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 77.8 bits (39), Expect = 1e-011
Identities = 126/155 (81%)
Strand = Plus / Minus
Query: 155 aagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagctgctg 214
||||| ||||||||||| ||| ||||||||||| || |||||||||||| || ||
Sbjct: 5961015 aaggggctggagttcgagtaccgcgaggaggacctcggcaacaagagcgacctcctcctc 5960956
Query: 215 cgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgcgctcccg 274
||| |||||||||||||| |||| | ||||| ||| |||||| ||||||| | || |
Sbjct: 5960955 cgctccaaccccgtccacaggaagatccccgtcctcctccacgccggccgccccgtctcc 5960896
Query: 275 gagtccgtcattatcctccagtaccttgacgacgc 309
|||||| || | |||||||||||||| ||||||||
Sbjct: 5960895 gagtccctcgtcatcctccagtacctcgacgacgc 5960861
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 77.8 bits (39), Expect = 1e-011
Identities = 126/155 (81%)
Strand = Plus / Minus
Query: 155 aagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagctgctg 214
||||| ||||||||||| ||| ||||||||||| || |||||||||||| || ||
Sbjct: 33227178 aaggggctggagttcgagtaccgcgaggaggacctcggcaacaagagcgacctcctcctc 33227119
Query: 215 cgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgcgctcccg 274
||| |||||||||||||| |||| | ||||| ||| |||||| ||||||| | || |
Sbjct: 33227118 cgctccaaccccgtccacaggaagatccccgtcctcctccacgccggccgccccgtctcc 33227059
Query: 275 gagtccgtcattatcctccagtaccttgacgacgc 309
|||||| || | |||||||||||||| ||||||||
Sbjct: 33227058 gagtccctcgtcatcctccagtacctcgacgacgc 33227024
Score = 46.1 bits (23), Expect = 0.047
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 221 aaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgc 267
|||||| ||||||||||||| ||||| ||| |||| |||| ||||||
Sbjct: 22619358 aaccccatccacaagaaggttcccgttctcctccatggcgaccgcgc 22619312
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 77.8 bits (39), Expect = 1e-011
Identities = 126/155 (81%)
Strand = Plus / Minus
Query: 155 aagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagctgctg 214
||||| ||||||||||| ||| ||||||||||| || |||||||||||| || ||
Sbjct: 32406661 aaggggctggagttcgagtaccgcgaggaggacctcggcaacaagagcgacctcctcctc 32406602
Query: 215 cgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgcgctcccg 274
||| |||||||||||||| |||| | ||||| ||| |||||| ||||||| | || |
Sbjct: 32406601 cgctccaaccccgtccacaggaagatccccgtcctcctccacgccggccgccccgtctcc 32406542
Query: 275 gagtccgtcattatcctccagtaccttgacgacgc 309
|||||| || | |||||||||||||| ||||||||
Sbjct: 32406541 gagtccctcgtcatcctccagtacctcgacgacgc 32406507
Score = 46.1 bits (23), Expect = 0.047
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 221 aaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgc 267
|||||| ||||||||||||| ||||| ||| |||| |||| ||||||
Sbjct: 21962233 aaccccatccacaagaaggttcccgttctcctccatggcgaccgcgc 21962187
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 77.8 bits (39), Expect = 1e-011
Identities = 126/155 (81%)
Strand = Plus / Minus
Query: 155 aagggcctggagttcgactacgtggaggaggacctggggaacaagagcgacgagctgctg 214
||||| ||||||||||| ||| ||||||||||| || |||||||||||| || ||
Sbjct: 32316151 aaggggctggagttcgagtaccgcgaggaggacctcggcaacaagagcgacctcctcctc 32316092
Query: 215 cgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgcgctcccg 274
||| |||||||||||||| |||| | ||||| ||| |||||| ||||||| | || |
Sbjct: 32316091 cgctccaaccccgtccacaggaagatccccgtcctcctccacgccggccgccccgtctcc 32316032
Query: 275 gagtccgtcattatcctccagtaccttgacgacgc 309
|||||| || | |||||||||||||| ||||||||
Sbjct: 32316031 gagtccctcgtcatcctccagtacctcgacgacgc 32315997
Score = 46.1 bits (23), Expect = 0.047
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 221 aaccccgtccacaagaaggtgcccgtgctcgtccacggcggccgcgc 267
|||||| ||||||||||||| ||||| ||| |||| |||| ||||||
Sbjct: 21969204 aaccccatccacaagaaggttcccgttctcctccatggcgaccgcgc 21969158
>gb|AU057225.1|AU057225 AU057225 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S21259_1A, mRNA sequence
Length = 466
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 73 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 132
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 133 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 192
Query: 262 c 262
|
Sbjct: 193 c 193
>gb|AU064702.1|AU064702 AU064702 Rice panicle (between 3cm to 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E40288_1A, mRNA sequence
Length = 460
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 82 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 141
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 142 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 201
Query: 262 c 262
|
Sbjct: 202 c 202
>gb|AU064832.1|AU064832 AU064832 Rice panicle (between 3cm to 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E40631_1A, mRNA sequence
Length = 332
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 82 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 141
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 142 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 201
Query: 262 c 262
|
Sbjct: 202 c 202
>gb|AU077658.1|AU077658 AU077658 Rice panicle (between 3cm to 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E40460_5A, mRNA sequence
Length = 412
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 82 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 141
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 142 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 201
Query: 262 c 262
|
Sbjct: 202 c 202
>gb|CB674416.1|CB674416 OSJNEe09H07.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe09H07 5', mRNA sequence
Length = 829
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 74 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 133
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 134 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 193
Query: 262 c 262
|
Sbjct: 194 c 194
>gb|CF290862.1|CF290862 14ROOT--01-B01.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-B01, mRNA sequence
Length = 519
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 113 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 172
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 173 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 232
Query: 262 c 262
|
Sbjct: 233 c 233
>gb|CF291218.1|CF291218 14ROOT--01-I24.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-I24, mRNA sequence
Length = 531
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 101 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 160
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 161 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 220
Query: 262 c 262
|
Sbjct: 221 c 221
>gb|CF291278.1|CF291278 14ROOT--01-K07.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-K07, mRNA sequence
Length = 416
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 96 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 155
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 156 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 215
Query: 262 c 262
|
Sbjct: 216 c 216
>gb|CF291519.1|CF291519 14ROOT--01-P15.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-P15, mRNA sequence
Length = 430
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 67 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 126
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 127 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 186
Query: 262 c 262
|
Sbjct: 187 c 187
>gb|CF291931.1|CF291931 14ROOT--02-J01.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-J01, mRNA sequence
Length = 550
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 109 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 168
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 169 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 228
Query: 262 c 262
|
Sbjct: 229 c 229
>gb|CF292637.1|CF292637 30DGS--01-I15.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--01-I15, mRNA sequence
Length = 621
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 90 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 149
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 150 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 209
Query: 262 c 262
|
Sbjct: 210 c 210
>gb|CF294146.1|CF294146 30DGS--03-J05.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--03-J05, mRNA sequence
Length = 522
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 98 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 157
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 158 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 217
Query: 262 c 262
|
Sbjct: 218 c 218
>gb|CF294299.1|CF294299 30DGS--03-M12.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--03-M12, mRNA sequence
Length = 539
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 84 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 143
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 144 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 203
Query: 262 c 262
|
Sbjct: 204 c 204
>gb|CF294321.1|CF294321 30DGS--03-M23.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--03-M23, mRNA sequence
Length = 412
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 96 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 155
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 156 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 215
Query: 262 c 262
|
Sbjct: 216 c 216
>gb|CF294747.1|CF294747 30DGS--04-G09.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--04-G09, mRNA sequence
Length = 408
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 110 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 169
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 170 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 229
Query: 262 c 262
|
Sbjct: 230 c 230
>gb|CF295323.1|CF295323 30DGS--05-D13.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--05-D13, mRNA sequence
Length = 551
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 109 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 168
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 169 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 228
Query: 262 c 262
|
Sbjct: 229 c 229
>gb|CF295873.1|CF295873 30DGS--06-A01.g1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--06-A01, mRNA sequence
Length = 402
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 201 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 260
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 261 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 320
Query: 262 c 262
|
Sbjct: 321 c 321
>gb|CF296288.1|CF296288 30DGS--06-J11.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--06-J11, mRNA sequence
Length = 500
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 144 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 203
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 204 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 263
Query: 262 c 262
|
Sbjct: 264 c 264
>gb|CF305190.1|CF305190 CLD1--01-A12.b1 Rice cold treated leaf plasmid cDNA library (CLD1)
Oryza sativa (japonica cultivar-group) cDNA clone
CLD1--01-A12, mRNA sequence
Length = 535
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 96 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 155
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 156 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 215
Query: 262 c 262
|
Sbjct: 216 c 216
>gb|CF335289.1|CF335289 JMT--04-O15.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--04-O15, mRNA sequence
Length = 537
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 96 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 155
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 156 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 215
Query: 262 c 262
|
Sbjct: 216 c 216
>gb|BP184455.1|BP184455 BP184455 pNS rice panicle cDNA, flowering stage Oryza sativa
(japonica cultivar-group) cDNA clone 12YPG040, mRNA
sequence
Length = 665
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 74 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 133
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 134 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 193
Query: 262 c 262
|
Sbjct: 194 c 194
>gb|BP184600.1|BP184600 BP184600 pNS rice panicle cDNA, flowering stage Oryza sativa
(japonica cultivar-group) cDNA clone 13YPR010, mRNA
sequence
Length = 616
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 83 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 142
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 143 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 202
Query: 262 c 262
|
Sbjct: 203 c 203
>gb|BP184989.1|BP184989 BP184989 pNS rice callus cDNA Oryza sativa (japonica
cultivar-group) cDNA clone 24C4AB053, mRNA sequence
Length = 654
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 83 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 142
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 143 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 202
Query: 262 c 262
|
Sbjct: 203 c 203
>dbj|AK060223.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F11, full
insert sequence
Length = 901
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 93 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 152
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 153 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 212
Query: 262 c 262
|
Sbjct: 213 c 213
>dbj|AK061838.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-D11, full
insert sequence
Length = 916
Score = 73.8 bits (37), Expect = 2e-010
Identities = 100/121 (82%)
Strand = Plus / Plus
Query: 142 ggcgctgcggctcaagggcctggagttcgactacgtggaggaggacctggggaacaagag 201
|||||| |||||||||||| | || | ||| ||||| || |||||||| | ||||||||
Sbjct: 95 ggcgctccggctcaagggcgtcgactacgagtacgtcgacgaggacctcgccaacaagag 154
Query: 202 cgacgagctgctgcgccacaaccccgtccacaagaaggtgcccgtgctcgtccacggcgg 261
||| | |||||| || |||||||| || |||||||||||||||||| ||||||| |||
Sbjct: 155 cgaggcgctgctccggcacaacccggtgaccaagaaggtgcccgtgctggtccacgacgg 214
Query: 262 c 262
|
Sbjct: 215 c 215
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,938,684
Number of Sequences: 438736
Number of extensions: 1938684
Number of successful extensions: 17467
Number of sequences better than 0.5: 186
Number of HSP's better than 0.5 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 15869
Number of HSP's gapped (non-prelim): 1542
length of query: 1267
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1246
effective length of database: 2,791,206,460
effective search space: 3477843249160
effective search space used: 3477843249160
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)