BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521353.2.1
(1279 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK103611.1| Oryza sativa (japonica cultivar-group) cDNA... 904 0.0
ref|XM_474478.1| Oryza sativa (japonica cultivar-group), p... 904 0.0
dbj|AK061991.1| Oryza sativa (japonica cultivar-group) cDNA... 896 0.0
gb|CB656854.1|CB656854 OSJNEc11K10.f OSJNEc Oryza sativa (j... 837 0.0
gb|CF303095.1|CF303095 ABF1--01-F06.g1 ABF3-overexpressing ... 672 0.0
dbj|AK063987.1| Oryza sativa (japonica cultivar-group) cDNA... 618 e-174
ref|XM_479684.1| Oryza sativa (japonica cultivar-group), mRNA 618 e-174
ref|XM_507083.1| PREDICTED Oryza sativa (japonica cultivar-... 618 e-174
dbj|AK101575.1| Oryza sativa (japonica cultivar-group) cDNA... 611 e-172
gb|CF326695.1|CF326695 JMT1--06-M11.g1 AtJMT-overexpressing... 585 e-164
gb|C27462.1|C27462 C27462 Rice callus cDNA Oryza sativa (ja... 505 e-140
gb|C97784.1|C97784 C97784 Rice callus Oryza sativa (japonic... 385 e-104
gb|CF318828.1|CF318828 HD--09-B19.g1 OsHDAC1-overexpressing... 377 e-101
gb|CF316595.1|CF316595 HD--05-P03.b1 OsHDAC1-overexpressing... 375 e-101
gb|CB669323.1|CB669323 OSJNEe01L17.f OSJNEe Oryza sativa (j... 359 2e-096
gb|CB656855.1|CB656855 OSJNEc11K10.r OSJNEc Oryza sativa (j... 321 5e-085
gb|CF324244.1|CF324244 HDN--06-A08.g1 OsHDAC1-overexpressin... 276 3e-071
gb|AACV01010712.1| Oryza sativa (japonica cultivar-group) c... 268 7e-069
ref|NT_107201.1| Oryza sativa (japonica cultivar-group) 268 7e-069
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 268 7e-069
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 268 7e-069
emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromoso... 268 7e-069
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 268 7e-069
gb|CB669324.1|CB669324 OSJNEe01L17.r OSJNEe Oryza sativa (j... 210 1e-051
dbj|AP003909.3| Oryza sativa (japonica cultivar-group) geno... 184 8e-044
gb|AACV01017099.1| Oryza sativa (japonica cultivar-group) c... 184 8e-044
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 184 8e-044
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 184 8e-044
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 184 8e-044
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 184 8e-044
gb|CF316596.1|CF316596 HD--05-P03.g1 OsHDAC1-overexpressing... 172 3e-040
gb|D22398.2|D22398 RICC10958A Rice callus Oryza sativa (jap... 172 3e-040
gb|AU085897.1|AU085897 AU085897 Rice panicle at flowering s... 161 1e-036
gb|CF280984.1|CF280984 14ETL--07-N20.b1 Rice etiolated leaf... 155 7e-035
gb|CF280988.1|CF280988 14ETL--07-N22.b1 Rice etiolated leaf... 155 7e-035
dbj|AG021145.1| Oryza sativa (japonica cultivar-group) DNA,... 123 3e-025
gb|CF327832.1|CF327832 NACL--02-H16.b1 Rice callus plasmid ... 123 3e-025
dbj|AG209334.1| Oryza sativa (japonica cultivar-group) DNA,... 119 4e-024
gb|CF318827.1|CF318827 HD--09-B19.b1 OsHDAC1-overexpressing... 103 2e-019
gb|CF317643.1|CF317643 HD--07-G16.b1 OsHDAC1-overexpressing... 101 9e-019
gb|CF280989.1|CF280989 14ETL--07-N22.g1 Rice etiolated leaf... 74 2e-010
gb|CF337102.1|CF337102 JMT--07-G16.g1 AtJMT-overexpressing ... 68 1e-008
gb|AU160841.1|AU160841 AU160841 Rice callus Oryza sativa (j... 58 1e-005
gb|CF280985.1|CF280985 14ETL--07-N20.g1 Rice etiolated leaf... 50 0.003
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 44 0.19
dbj|AP003622.3| Oryza sativa (japonica cultivar-group) geno... 44 0.19
gb|AACV01014438.1| Oryza sativa (japonica cultivar-group) c... 44 0.19
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.19
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.19
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 44 0.19
>dbj|AK103611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133J17, full
insert sequence
Length = 1605
Score = 904 bits (456), Expect = 0.0
Identities = 789/900 (87%)
Strand = Plus / Minus
Query: 297 gatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccacacccgat 356
||||| |||||||||||| ||||| ||||| || ||||| || ||||| | || |||||
Sbjct: 1249 gatcaaatgcctcacatacccataaaaagtacagccaacgagcgtgatcgcgcatccgat 1190
Query: 357 tgcattcattgcagagattggattccggaagatcgaccacgacactaacactgccaccgc 416
||||||||| | |||||| || |||||||||||| |||| ||||| || || || || ||
Sbjct: 1189 tgcattcataggagagatagggttccggaagatcaaccatgacaccaatacagcaacagc 1130
Query: 417 gactttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaa 476
||||| |||||||| ||||| ||||| |||||||| || ||||||||||| ||||||||
Sbjct: 1129 aactttcaggttgccagcaacattgaaggtcactgcagtggttgaatggatcacgtagaa 1070
Query: 477 gatggagaagttaaggcagaacgcaagcacccccgaacctaggatgatagtcagcgcagg 536
||||||||||| ||||| || |||||||| || || |||| ||||||| || ||||
Sbjct: 1069 aatggagaagtttaggcaaaatgcaagcactccagagcctatgatgataactagtgcaga 1010
Query: 537 aacgatggaatcatgtgtgtagaaccagttcattacacctcctccttcaagcaccatcgc 596
| | ||||| |||||||||||||||||| | | ||||| ||||||||||| | || ||
Sbjct: 1009 agcaatggagtcatgtgtgtagaaccaggtaaccacaccgcctccttcaagtaacactgc 950
Query: 597 tggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaatgctgtc 656
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 949 tggtagagccagtatcatggtggcaaagggtgccatgtagtacactgtgttaatgctgtc 890
Query: 657 aaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagccaggca 716
||| |||||||| |||||||| ||||||||||| |||||||| ||||| ||||| |||||
Sbjct: 889 aaatttgtatccgtggagtagagactctgccaaaatggtcttggtagatgtagcaaggca 830
Query: 717 gccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaagtcag 776
|||||||||||||||||||||||| || |||||||| ||||||||||| | ||||| ||
Sbjct: 829 gccaaccatggcagcacagaaaccaaacatgttgaaactaagctctgttattgaagttag 770
Query: 777 gagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaatgcttgct 836
||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 769 gagtattcccccaactattgggaccagcgaagcccatatgcgccactcaaaatgcttgct 710
Query: 837 ccagactagccactgcagaataactgtggttgcaggagtgaaagatttgattgtctgcat 896
||| |||| ||||||||||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 709 ccaaactaaccactgcagaataaccgtggttgcaggggtgaaagatttgatagtctgcat 650
Query: 897 gaaggagactgggatgtagcgcaagctgacatttcccagcacaatgtttatgcagaagac 956
|||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||
Sbjct: 649 aaaggagactgggatgtagcgcaggctgacatttccgagcacgatgtttatgcagaagac 590
Query: 957 gaaggacattggaaatatccttttccagcggtcctccggttcaacttgaatcaggggttt 1016
|| ||||||||||| |||||| |||| ||||| || ||||| |||||||| || |||||
Sbjct: 589 aaatgacattggaaaaatccttctccaacggtcttctggttcgacttgaatgagtggttt 530
Query: 1017 cgccttgaggacatggattgcaatgtaagctccaatggaagagcagatgaagtggacgca 1076
|| ||||| |||||||||||||| ||||| ||||| |||||||| ||||||||||| ||
Sbjct: 529 tgctttgagcacatggattgcaatataagccccaattgaagagcatatgaagtggacaca 470
Query: 1077 ggacacggtgagagggaacttgaaatccagtttctggaagatccacttgttcatgatgat 1136
||||| || ||||| || ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 469 agacaccgtcagaggaaatttgaaatccagcttctggaagatccacttgttgatgatgat 410
Query: 1137 gacagtgacgttgaagccccaccactggaggatggcgagcaccgcgcgcagggtgcccag 1196
||| |||||||||||||||||||||||||||||||| |||| |||||||||| |||||||
Sbjct: 409 gacggtgacgttgaagccccaccactggaggatggccagcagcgcgcgcaggttgcccag 350
>ref|XM_474478.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1053
Score = 904 bits (456), Expect = 0.0
Identities = 789/900 (87%)
Strand = Plus / Minus
Query: 297 gatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccacacccgat 356
||||| |||||||||||| ||||| ||||| || ||||| || ||||| | || |||||
Sbjct: 936 gatcaaatgcctcacatacccataaaaagtacagccaacgagcgtgatcgcgcatccgat 877
Query: 357 tgcattcattgcagagattggattccggaagatcgaccacgacactaacactgccaccgc 416
||||||||| | |||||| || |||||||||||| |||| ||||| || || || || ||
Sbjct: 876 tgcattcataggagagatagggttccggaagatcaaccatgacaccaatacagcaacagc 817
Query: 417 gactttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaa 476
||||| |||||||| ||||| ||||| |||||||| || ||||||||||| ||||||||
Sbjct: 816 aactttcaggttgccagcaacattgaaggtcactgcagtggttgaatggatcacgtagaa 757
Query: 477 gatggagaagttaaggcagaacgcaagcacccccgaacctaggatgatagtcagcgcagg 536
||||||||||| ||||| || |||||||| || || |||| ||||||| || ||||
Sbjct: 756 aatggagaagtttaggcaaaatgcaagcactccagagcctatgatgataactagtgcaga 697
Query: 537 aacgatggaatcatgtgtgtagaaccagttcattacacctcctccttcaagcaccatcgc 596
| | ||||| |||||||||||||||||| | | ||||| ||||||||||| | || ||
Sbjct: 696 agcaatggagtcatgtgtgtagaaccaggtaaccacaccgcctccttcaagtaacactgc 637
Query: 597 tggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaatgctgtc 656
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 636 tggtagagccagtatcatggtggcaaagggtgccatgtagtacactgtgttaatgctgtc 577
Query: 657 aaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagccaggca 716
||| |||||||| |||||||| ||||||||||| |||||||| ||||| ||||| |||||
Sbjct: 576 aaatttgtatccgtggagtagagactctgccaaaatggtcttggtagatgtagcaaggca 517
Query: 717 gccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaagtcag 776
|||||||||||||||||||||||| || |||||||| ||||||||||| | ||||| ||
Sbjct: 516 gccaaccatggcagcacagaaaccaaacatgttgaaactaagctctgttattgaagttag 457
Query: 777 gagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaatgcttgct 836
||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 456 gagtattcccccaactattgggaccagcgaagcccatatgcgccactcaaaatgcttgct 397
Query: 837 ccagactagccactgcagaataactgtggttgcaggagtgaaagatttgattgtctgcat 896
||| |||| ||||||||||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 396 ccaaactaaccactgcagaataaccgtggttgcaggggtgaaagatttgatagtctgcat 337
Query: 897 gaaggagactgggatgtagcgcaagctgacatttcccagcacaatgtttatgcagaagac 956
|||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||
Sbjct: 336 aaaggagactgggatgtagcgcaggctgacatttccgagcacgatgtttatgcagaagac 277
Query: 957 gaaggacattggaaatatccttttccagcggtcctccggttcaacttgaatcaggggttt 1016
|| ||||||||||| |||||| |||| ||||| || ||||| |||||||| || |||||
Sbjct: 276 aaatgacattggaaaaatccttctccaacggtcttctggttcgacttgaatgagtggttt 217
Query: 1017 cgccttgaggacatggattgcaatgtaagctccaatggaagagcagatgaagtggacgca 1076
|| ||||| |||||||||||||| ||||| ||||| |||||||| ||||||||||| ||
Sbjct: 216 tgctttgagcacatggattgcaatataagccccaattgaagagcatatgaagtggacaca 157
Query: 1077 ggacacggtgagagggaacttgaaatccagtttctggaagatccacttgttcatgatgat 1136
||||| || ||||| || ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 156 agacaccgtcagaggaaatttgaaatccagcttctggaagatccacttgttgatgatgat 97
Query: 1137 gacagtgacgttgaagccccaccactggaggatggcgagcaccgcgcgcagggtgcccag 1196
||| |||||||||||||||||||||||||||||||| |||| |||||||||| |||||||
Sbjct: 96 gacggtgacgttgaagccccaccactggaggatggccagcagcgcgcgcaggttgcccag 37
>dbj|AK061991.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-C01, full
insert sequence
Length = 1538
Score = 896 bits (452), Expect = 0.0
Identities = 788/900 (87%)
Strand = Plus / Minus
Query: 297 gatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccacacccgat 356
||||| |||||||||||| ||||| ||||| || ||||| || ||||| | || |||||
Sbjct: 1248 gatcaaatgcctcacatacccataaaaagtacagccaacgagcgtgatcgcgcatccgat 1189
Query: 357 tgcattcattgcagagattggattccggaagatcgaccacgacactaacactgccaccgc 416
||||||||| | |||||| || |||||||||||| |||| ||||| || || || || ||
Sbjct: 1188 tgcattcataggagagatagggttccggaagatcaaccatgacaccaatacagcaacagc 1129
Query: 417 gactttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaa 476
||||| |||||||| ||||| ||||| |||||||| || ||||||||||| ||||||||
Sbjct: 1128 aactttcaggttgccagcaacattgaaggtcactgcagtggttgaatggatcacgtagaa 1069
Query: 477 gatggagaagttaaggcagaacgcaagcacccccgaacctaggatgatagtcagcgcagg 536
||||||||||| ||||| || |||||||| || || |||| ||||||| || ||||
Sbjct: 1068 aatggagaagtttaggcaaaatgcaagcactccagagcctatgatgataactagtgcaga 1009
Query: 537 aacgatggaatcatgtgtgtagaaccagttcattacacctcctccttcaagcaccatcgc 596
| | ||||| |||||||||||||||||| | | ||||| ||||||||||| | || ||
Sbjct: 1008 agcaatggagtcatgtgtgtagaaccaggtaaccacaccgcctccttcaagtaacactgc 949
Query: 597 tggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaatgctgtc 656
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 948 tggtagagccagtatcatggtggcaaagggtgccatgtagtacactgtgctaatgctgtc 889
Query: 657 aaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagccaggca 716
||| |||||||| |||||||| ||||||||||| |||||||| ||||| ||||| |||||
Sbjct: 888 aaatttgtatccgtggagtagagactctgccaaaatggtcttggtagatgtagcaaggca 829
Query: 717 gccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaagtcag 776
|||||||||||||||||||||||| || |||||||| ||||||||||| | ||||| ||
Sbjct: 828 gccaaccatggcagcacagaaaccaaacatgttgaaactaagctctgttattgaagttag 769
Query: 777 gagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaatgcttgct 836
||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 768 gagtattcccccaactattgggaccagcgaagcccatatgcgccactcaaaatgcttgct 709
Query: 837 ccagactagccactgcagaataactgtggttgcaggagtgaaagatttgattgtctgcat 896
||| |||| ||||||||||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 708 ccaaactaaccactgcagaataaccgtggttgcaggggtgaaagatttgatagtctgcat 649
Query: 897 gaaggagactgggatgtagcgcaagctgacatttcccagcacaatgtttatgcagaagac 956
|||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||
Sbjct: 648 aaaggagactgggatgtagcgcaggctgacatttccgagcacgatgtttatgcagaagac 589
Query: 957 gaaggacattggaaatatccttttccagcggtcctccggttcaacttgaatcaggggttt 1016
|| ||||||||||| |||||| |||| ||||| || ||||| |||||||| || |||||
Sbjct: 588 aaatgacattggaaaaatccttctccaacggtcttctggttcgacttgaatgagtggttt 529
Query: 1017 cgccttgaggacatggattgcaatgtaagctccaatggaagagcagatgaagtggacgca 1076
|| ||||| |||||||||||||| ||||| ||||| |||||||| ||||||||||| ||
Sbjct: 528 tgctttgagcacatggattgcaatataagccccaattgaagagcatatgaagtggacaca 469
Query: 1077 ggacacggtgagagggaacttgaaatccagtttctggaagatccacttgttcatgatgat 1136
||||| || ||||| || ||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 468 agacaccgtcagaggaaatttgaaatccagcttctggaagatccacttgttgatgatgat 409
Query: 1137 gacagtgacgttgaagccccaccactggaggatggcgagcaccgcgcgcagggtgcccag 1196
||| |||||||||||||||||||||||||||||||| |||| |||||||||| |||||||
Sbjct: 408 gacggtgacgttgaagccccaccactggaggatggccagcagcgcgcgcaggttgcccag 349
>gb|CB656854.1|CB656854 OSJNEc11K10.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11K10 5', mRNA sequence
Length = 841
Score = 837 bits (422), Expect = 0.0
Identities = 685/773 (88%)
Strand = Plus / Minus
Query: 424 aggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaagatggag 483
|||||||| ||||| ||||| |||||||| || ||||||||||| |||||||| ||||||
Sbjct: 801 aggttgccagcaacattgaaggtcactgcagtggttgaatggatcacgtagaaaatggag 742
Query: 484 aagttaaggcagaacgcaagcacccccgaacctaggatgatagtcagcgcaggaacgatg 543
||||| ||||| || |||||||| || || | || ||||||| || |||| | | |||
Sbjct: 741 aagtttaggcaaaatgcaagcactccagagcntatgatgataactagtgcagaagcaatg 682
Query: 544 gaatcatgtgtgtagaaccagttcattacacctcctccttcaagcaccatcgctggtaga 603
|| |||||||||||||||||| | | ||||| ||||||||||| | || |||||||||
Sbjct: 681 gagtcatgtgtgtagaaccaggtaaccacaccgcctccttcaagtaacactgctggtaga 622
Query: 604 gccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaatgctgtcaaacttg 663
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 621 gccagtatcatggtggcaaagggtgccatgtagtacactgtgttaatgctgtcaaatttg 562
Query: 664 tatccatggagtagggactctgccaagatggtctttgtagacgtagccaggcagccaacc 723
||||| |||||||| ||||||||||| |||||||| ||||| ||||| ||||||||||||
Sbjct: 561 tatccgtggagtagagactctgccaaaatggtcttggtagatgtagcaaggcagccaacc 502
Query: 724 atggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaagtcaggagtatt 783
||||||||||||||||| || |||||||| ||||||||||| | ||||| |||||||||
Sbjct: 501 atggcagcacagaaaccaaacatgttgaaactaagctctgttattgaagttaggagtatt 442
Query: 784 ccgccaactatagggaccagcgaagcccatatgcgccactcgaaatgcttgctccagact 843
|| |||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 441 cccccaactattgggaccagcgaagcccatatgcgccactcaaaatgcttgctccaaact 382
Query: 844 agccactgcagaataactgtggttgcaggagtgaaagatttgattgtctgcatgaaggag 903
| ||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||||
Sbjct: 381 aaccactgcagaataaccgtggttgcaggggtgaaagatttgatagtctgcataaaggag 322
Query: 904 actgggatgtagcgcaagctgacatttcccagcacaatgtttatgcagaagacgaaggac 963
|||||||||||||||| |||||||||||| ||||| ||||||||||||||||| || |||
Sbjct: 321 actgggatgtagcgcaggctgacatttccgagcacgatgtttatgcagaagacaaatgac 262
Query: 964 attggaaatatccttttccagcggtcctccggttcaacttgaatcaggggtttcgccttg 1023
|||||||| |||||| |||| ||||| || ||||| |||||||| || ||||| || |||
Sbjct: 261 attggaaaaatccttctccaacggtcttctggttcgacttgaatgagtggttttgctttg 202
Query: 1024 aggacatggattgcaatgtaagctccaatggaagagcagatgaagtggacgcaggacacg 1083
|| |||||||||||||| ||||| ||||| |||||||| ||||||||||| || |||||
Sbjct: 201 agcacatggattgcaatataagccccaattgaagagcatatgaagtggacacaagacacc 142
Query: 1084 gtgagagggaacttgaaatccagtttctggaagatccacttgttcatgatgatgacagtg 1143
|| ||||| || ||||||||||| |||||||||||||||||||| ||||||||||| |||
Sbjct: 141 gtcagaggaaatttgaaatccagcttctggaagatccacttgttgatgatgatgacggtg 82
Query: 1144 acgttgaagccccaccactggaggatggcgagcaccgcgcgcagggtgcccag 1196
||||||||||||||||||||||||||||| |||| |||||||||| |||||||
Sbjct: 81 acgttgaagccccaccactggaggatggccagcagcgcgcgcaggttgcccag 29
>gb|CF303095.1|CF303095 ABF1--01-F06.g1 ABF3-overexpressing transgenic rice lambda phage cDNA
library (ABF1) Oryza sativa (japonica cultivar-group)
cDNA clone ABF1--01-F06, mRNA sequence
Length = 571
Score = 672 bits (339), Expect = 0.0
Identities = 498/551 (90%)
Strand = Plus / Minus
Query: 595 gctggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaatgctg 654
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 559 gctggtagagccagtatcatggtggcaaagggtgccatgtagtacactgtgttaatgctg 500
Query: 655 tcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagccagg 714
||||| |||||||| |||||||| ||||||||||| |||||||| ||||| ||||| |||
Sbjct: 499 tcaaatttgtatccgtggagtagagactctgccaaaatggtcttggtagatgtagcaagg 440
Query: 715 cagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaagtc 774
|||||||||||||||||||||||||| || |||||||| ||||||||||| | |||||
Sbjct: 439 cagccaaccatggcagcacagaaaccaaacatgttgaaactaagctctgttattgaagtt 380
Query: 775 aggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaatgcttg 834
||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 379 aggagtattcccccaactattgggaccagcgaagcccatatgcgccactcaaaatgcttg 320
Query: 835 ctccagactagccactgcagaataactgtggttgcaggagtgaaagatttgattgtctgc 894
||||| |||| ||||||||||||||| ||||||||||| |||||||||||||| ||||||
Sbjct: 319 ctccaaactaaccactgcagaataaccgtggttgcaggggtgaaagatttgatagtctgc 260
Query: 895 atgaaggagactgggatgtagcgcaagctgacatttcccagcacaatgtttatgcagaag 954
|| |||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||
Sbjct: 259 ataaaggagactgggatgtagcgcaggctgacatttccgagcacgatgtttatgcagaag 200
Query: 955 acgaaggacattggaaatatccttttccagcggtcctccggttcaacttgaatcaggggt 1014
|| || ||||||||||| |||||| |||| ||||| || ||||| |||||||| || |||
Sbjct: 199 acaaatgacattggaaaaatccttctccaacggtcttctggttcgacttgaatgagtggt 140
Query: 1015 ttcgccttgaggacatggattgcaatgtaagctccaatggaagagcagatgaagtggacg 1074
|| || ||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||
Sbjct: 139 tttgctttgagcacatggattgcaatataagccccaattgaagagcatatgaagtggaca 80
Query: 1075 caggacacggtgagagggaacttgaaatccagtttctggaagatccacttgttcatgatg 1134
|| ||||| || ||||| || ||||||||||| |||||||||||||||||||| ||||||
Sbjct: 79 caagacaccgtcagaggaaatttgaaatccagcttctggaagatccacttgttgatgatg 20
Query: 1135 atgacagtgac 1145
||||| |||||
Sbjct: 19 atgacggtgac 9
>dbj|AK063987.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-D11, full
insert sequence
Length = 1589
Score = 618 bits (312), Expect = e-174
Identities = 738/880 (83%)
Strand = Plus / Minus
Query: 290 gctgcgagatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccac 349
|||||||||| ||||||||||||||||||||||| ||||| || || || |||||| | |
Sbjct: 1142 gctgcgagatgagatgcctcacatagccatagaaggtgcagccgacgagcgtgattgcgc 1083
Query: 350 acccgattgcattcattgcagagattggattccggaagatcgaccacgacactaacactg 409
|||||| || ||||| || ||||| || |||||||||||| ||||||||| ||||| |
Sbjct: 1082 acccgacagcgttcatcgcggagatcgggttccggaagatcatccacgacaccaacacag 1023
Query: 410 ccaccgcgactttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatga 469
|||| || ||||| |||||||| || ||||| || || || || ||||| ||||||||||
Sbjct: 1022 ccacagcaactttcaggttgccggctacgttaaaggtgacagccgttgtggaatggatga 963
Query: 470 cgtagaagatggagaagttaaggcagaacgcaagcacccccgaacctaggatgatagtca 529
||||||||||||||||||| ||||| || || || || || || |||||| |||
Sbjct: 962 cgtagaagatggagaagttgaggcaaaatgcgagtactccggaggtggtgatgatgatca 903
Query: 530 gcgcaggaacgatggaatcatgtgtgtagaaccagttcattacacctcctccttcaagca 589
| ||||| ||||||||||||| ||||||| ||| || || || || | ||||| ||||
Sbjct: 902 gtgcagggacgatggaatcatacgtgtagagccaattgatgacgccactcccttccagca 843
Query: 590 ccatcgctggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaa 649
| |||||||||| | |||||||||||| ||||| || |||||||||||||| |||||||
Sbjct: 842 caatcgctggtactgacagtatcatggttgcaaatggcgccatgtagtacacagtgttaa 783
Query: 650 tgctgtcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtag 709
|||| ||||| ||||||||||||||||| |||||||| | ||||||||| ||||| || |
Sbjct: 782 tgctatcaaatttgtatccatggagtagagactctgcaaggatggtcttggtagatgttg 723
Query: 710 ccaggcagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccg 769
||||||| |||||||| |||||||| ||||| || |||||||| |||||||| || | |
Sbjct: 722 ccaggcaaccaaccatagcagcacaaaaaccaaacatgttgaaactaagctcagttattg 663
Query: 770 aagtcaggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaat 829
| || | | ||||| || ||||| || ||||| |||||||||||||||||||||||||
Sbjct: 662 atgttaacatgattcctcccactattggtaccagagaagcccatatgcgccactcgaaat 603
Query: 830 gcttgctccagactagccactgcagaataactgtggttgcaggagtgaaagatttgattg 889
||| |||||||| | |||||||||||||||||| |||||||| ||||||||||| || |
Sbjct: 602 acttcctccagaccaaccactgcagaataactgtcgttgcaggggtgaaagattttatgg 543
Query: 890 tctgcatgaaggagactgggatgtagcgcaagctgacatttcccagcacaatgtttatgc 949
||||||||||||||||||| || || | || ||||||||||||||| |||||||||||||
Sbjct: 542 tctgcatgaaggagactggaatatatctcaggctgacatttcccagtacaatgtttatgc 483
Query: 950 agaagacgaaggacattggaaatatccttttccagcggtcctccggttcaacttgaatca 1009
|||| || || |||||||| ||||| ||| |||| || ||||| || |||||| |||||
Sbjct: 482 agaacacaaatgacattgggaatattcttctccaccgatcctctggggcaacttcaatca 423
Query: 1010 ggggtttcgccttgaggacatggattgcaatgtaagctccaatggaagagcagatgaagt 1069
| |||||| |||||| | | |||||| |||||||||||||| |||||||| || ||||
Sbjct: 422 gtggtttcatcttgagaattttgattgcgatgtaagctccaatcgaagagcatataaagt 363
Query: 1070 ggacgcaggacacggtgagagggaacttgaaatccagtttctggaagatccacttgttca 1129
|||| || || || || |||||||||||||| |||| ||||||||||||||| |||||||
Sbjct: 362 ggacacacgagacagtaagagggaacttgaactccaatttctggaagatccatttgttca 303
Query: 1130 tgatgatgacagtgacgttgaagccccaccactggaggat 1169
|||||||||| |||||||||||||||||||| ||||||||
Sbjct: 302 tgatgatgacggtgacgttgaagccccaccattggaggat 263
>ref|XM_479684.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1589
Score = 618 bits (312), Expect = e-174
Identities = 738/880 (83%)
Strand = Plus / Minus
Query: 290 gctgcgagatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccac 349
|||||||||| ||||||||||||||||||||||| ||||| || || || |||||| | |
Sbjct: 1142 gctgcgagatgagatgcctcacatagccatagaaggtgcagccgacgagcgtgattgcgc 1083
Query: 350 acccgattgcattcattgcagagattggattccggaagatcgaccacgacactaacactg 409
|||||| || ||||| || ||||| || |||||||||||| ||||||||| ||||| |
Sbjct: 1082 acccgacagcgttcatcgcggagatcgggttccggaagatcatccacgacaccaacacag 1023
Query: 410 ccaccgcgactttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatga 469
|||| || ||||| |||||||| || ||||| || || || || ||||| ||||||||||
Sbjct: 1022 ccacagcaactttcaggttgccggctacgttaaaggtgacagccgttgtggaatggatga 963
Query: 470 cgtagaagatggagaagttaaggcagaacgcaagcacccccgaacctaggatgatagtca 529
||||||||||||||||||| ||||| || || || || || || |||||| |||
Sbjct: 962 cgtagaagatggagaagttgaggcaaaatgcgagtactccggaggtggtgatgatgatca 903
Query: 530 gcgcaggaacgatggaatcatgtgtgtagaaccagttcattacacctcctccttcaagca 589
| ||||| ||||||||||||| ||||||| ||| || || || || | ||||| ||||
Sbjct: 902 gtgcagggacgatggaatcatacgtgtagagccaattgatgacgccactcccttccagca 843
Query: 590 ccatcgctggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaa 649
| |||||||||| | |||||||||||| ||||| || |||||||||||||| |||||||
Sbjct: 842 caatcgctggtactgacagtatcatggttgcaaatggcgccatgtagtacacagtgttaa 783
Query: 650 tgctgtcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtag 709
|||| ||||| ||||||||||||||||| |||||||| | ||||||||| ||||| || |
Sbjct: 782 tgctatcaaatttgtatccatggagtagagactctgcaaggatggtcttggtagatgttg 723
Query: 710 ccaggcagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccg 769
||||||| |||||||| |||||||| ||||| || |||||||| |||||||| || | |
Sbjct: 722 ccaggcaaccaaccatagcagcacaaaaaccaaacatgttgaaactaagctcagttattg 663
Query: 770 aagtcaggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaat 829
| || | | ||||| || ||||| || ||||| |||||||||||||||||||||||||
Sbjct: 662 atgttaacatgattcctcccactattggtaccagagaagcccatatgcgccactcgaaat 603
Query: 830 gcttgctccagactagccactgcagaataactgtggttgcaggagtgaaagatttgattg 889
||| |||||||| | |||||||||||||||||| |||||||| ||||||||||| || |
Sbjct: 602 acttcctccagaccaaccactgcagaataactgtcgttgcaggggtgaaagattttatgg 543
Query: 890 tctgcatgaaggagactgggatgtagcgcaagctgacatttcccagcacaatgtttatgc 949
||||||||||||||||||| || || | || ||||||||||||||| |||||||||||||
Sbjct: 542 tctgcatgaaggagactggaatatatctcaggctgacatttcccagtacaatgtttatgc 483
Query: 950 agaagacgaaggacattggaaatatccttttccagcggtcctccggttcaacttgaatca 1009
|||| || || |||||||| ||||| ||| |||| || ||||| || |||||| |||||
Sbjct: 482 agaacacaaatgacattgggaatattcttctccaccgatcctctggggcaacttcaatca 423
Query: 1010 ggggtttcgccttgaggacatggattgcaatgtaagctccaatggaagagcagatgaagt 1069
| |||||| |||||| | | |||||| |||||||||||||| |||||||| || ||||
Sbjct: 422 gtggtttcatcttgagaattttgattgcgatgtaagctccaatcgaagagcatataaagt 363
Query: 1070 ggacgcaggacacggtgagagggaacttgaaatccagtttctggaagatccacttgttca 1129
|||| || || || || |||||||||||||| |||| ||||||||||||||| |||||||
Sbjct: 362 ggacacacgagacagtaagagggaacttgaactccaatttctggaagatccatttgttca 303
Query: 1130 tgatgatgacagtgacgttgaagccccaccactggaggat 1169
|||||||||| |||||||||||||||||||| ||||||||
Sbjct: 302 tgatgatgacggtgacgttgaagccccaccattggaggat 263
>ref|XM_507083.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1300_E01.7 mRNA
Length = 1695
Score = 618 bits (312), Expect = e-174
Identities = 738/880 (83%)
Strand = Plus / Minus
Query: 290 gctgcgagatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccac 349
|||||||||| ||||||||||||||||||||||| ||||| || || || |||||| | |
Sbjct: 1320 gctgcgagatgagatgcctcacatagccatagaaggtgcagccgacgagcgtgattgcgc 1261
Query: 350 acccgattgcattcattgcagagattggattccggaagatcgaccacgacactaacactg 409
|||||| || ||||| || ||||| || |||||||||||| ||||||||| ||||| |
Sbjct: 1260 acccgacagcgttcatcgcggagatcgggttccggaagatcatccacgacaccaacacag 1201
Query: 410 ccaccgcgactttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatga 469
|||| || ||||| |||||||| || ||||| || || || || ||||| ||||||||||
Sbjct: 1200 ccacagcaactttcaggttgccggctacgttaaaggtgacagccgttgtggaatggatga 1141
Query: 470 cgtagaagatggagaagttaaggcagaacgcaagcacccccgaacctaggatgatagtca 529
||||||||||||||||||| ||||| || || || || || || |||||| |||
Sbjct: 1140 cgtagaagatggagaagttgaggcaaaatgcgagtactccggaggtggtgatgatgatca 1081
Query: 530 gcgcaggaacgatggaatcatgtgtgtagaaccagttcattacacctcctccttcaagca 589
| ||||| ||||||||||||| ||||||| ||| || || || || | ||||| ||||
Sbjct: 1080 gtgcagggacgatggaatcatacgtgtagagccaattgatgacgccactcccttccagca 1021
Query: 590 ccatcgctggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaa 649
| |||||||||| | |||||||||||| ||||| || |||||||||||||| |||||||
Sbjct: 1020 caatcgctggtactgacagtatcatggttgcaaatggcgccatgtagtacacagtgttaa 961
Query: 650 tgctgtcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtag 709
|||| ||||| ||||||||||||||||| |||||||| | ||||||||| ||||| || |
Sbjct: 960 tgctatcaaatttgtatccatggagtagagactctgcaaggatggtcttggtagatgttg 901
Query: 710 ccaggcagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccg 769
||||||| |||||||| |||||||| ||||| || |||||||| |||||||| || | |
Sbjct: 900 ccaggcaaccaaccatagcagcacaaaaaccaaacatgttgaaactaagctcagttattg 841
Query: 770 aagtcaggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaat 829
| || | | ||||| || ||||| || ||||| |||||||||||||||||||||||||
Sbjct: 840 atgttaacatgattcctcccactattggtaccagagaagcccatatgcgccactcgaaat 781
Query: 830 gcttgctccagactagccactgcagaataactgtggttgcaggagtgaaagatttgattg 889
||| |||||||| | |||||||||||||||||| |||||||| ||||||||||| || |
Sbjct: 780 acttcctccagaccaaccactgcagaataactgtcgttgcaggggtgaaagattttatgg 721
Query: 890 tctgcatgaaggagactgggatgtagcgcaagctgacatttcccagcacaatgtttatgc 949
||||||||||||||||||| || || | || ||||||||||||||| |||||||||||||
Sbjct: 720 tctgcatgaaggagactggaatatatctcaggctgacatttcccagtacaatgtttatgc 661
Query: 950 agaagacgaaggacattggaaatatccttttccagcggtcctccggttcaacttgaatca 1009
|||| || || |||||||| ||||| ||| |||| || ||||| || |||||| |||||
Sbjct: 660 agaacacaaatgacattgggaatattcttctccaccgatcctctggggcaacttcaatca 601
Query: 1010 ggggtttcgccttgaggacatggattgcaatgtaagctccaatggaagagcagatgaagt 1069
| |||||| |||||| | | |||||| |||||||||||||| |||||||| || ||||
Sbjct: 600 gtggtttcatcttgagaattttgattgcgatgtaagctccaatcgaagagcatataaagt 541
Query: 1070 ggacgcaggacacggtgagagggaacttgaaatccagtttctggaagatccacttgttca 1129
|||| || || || || |||||||||||||| |||| ||||||||||||||| |||||||
Sbjct: 540 ggacacacgagacagtaagagggaacttgaactccaatttctggaagatccatttgttca 481
Query: 1130 tgatgatgacagtgacgttgaagccccaccactggaggat 1169
|||||||||| |||||||||||||||||||| ||||||||
Sbjct: 480 tgatgatgacggtgacgttgaagccccaccattggaggat 441
>dbj|AK101575.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050J21, full
insert sequence
Length = 1695
Score = 611 bits (308), Expect = e-172
Identities = 737/880 (83%)
Strand = Plus / Minus
Query: 290 gctgcgagatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccac 349
|||||||||| ||||||||||||||||||||||| ||||| || || || |||||| | |
Sbjct: 1320 gctgcgagatgagatgcctcacatagccatagaaggtgcagccgacgagcgtgattgcgc 1261
Query: 350 acccgattgcattcattgcagagattggattccggaagatcgaccacgacactaacactg 409
|||||| || ||||| | ||||| || |||||||||||| ||||||||| ||||| |
Sbjct: 1260 acccgacagcgttcatcgaggagatcgggttccggaagatcatccacgacaccaacacag 1201
Query: 410 ccaccgcgactttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatga 469
|||| || ||||| |||||||| || ||||| || || || || ||||| ||||||||||
Sbjct: 1200 ccacagcaactttcaggttgccggctacgttaaaggtgacagccgttgtggaatggatga 1141
Query: 470 cgtagaagatggagaagttaaggcagaacgcaagcacccccgaacctaggatgatagtca 529
||||||||||||||||||| ||||| || || || || || || |||||| |||
Sbjct: 1140 cgtagaagatggagaagttgaggcaaaatgcgagtactccggaggtggtgatgatgatca 1081
Query: 530 gcgcaggaacgatggaatcatgtgtgtagaaccagttcattacacctcctccttcaagca 589
| ||||| ||||||||||||| ||||||| ||| || || || || | ||||| ||||
Sbjct: 1080 gtgcagggacgatggaatcatacgtgtagagccaattgatgacgccactcccttccagca 1021
Query: 590 ccatcgctggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaa 649
| |||||||||| | |||||||||||| ||||| || |||||||||||||| |||||||
Sbjct: 1020 caatcgctggtactgacagtatcatggttgcaaatggcgccatgtagtacacagtgttaa 961
Query: 650 tgctgtcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtag 709
|||| ||||| ||||||||||||||||| |||||||| | ||||||||| ||||| || |
Sbjct: 960 tgctatcaaatttgtatccatggagtagagactctgcaaggatggtcttggtagatgttg 901
Query: 710 ccaggcagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccg 769
||||||| |||||||| |||||||| ||||| || |||||||| |||||||| || | |
Sbjct: 900 ccaggcaaccaaccatagcagcacaaaaaccaaacatgttgaaactaagctcagttattg 841
Query: 770 aagtcaggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaat 829
| || | | ||||| || ||||| || ||||| |||||||||||||||||||||||||
Sbjct: 840 atgttaacatgattcctcccactattggtaccagagaagcccatatgcgccactcgaaat 781
Query: 830 gcttgctccagactagccactgcagaataactgtggttgcaggagtgaaagatttgattg 889
||| |||||||| | |||||||||||||||||| |||||||| ||||||||||| || |
Sbjct: 780 acttcctccagaccaaccactgcagaataactgtcgttgcaggggtgaaagattttatgg 721
Query: 890 tctgcatgaaggagactgggatgtagcgcaagctgacatttcccagcacaatgtttatgc 949
||||||||||||||||||| || || | || ||||||||||||||| |||||||||||||
Sbjct: 720 tctgcatgaaggagactggaatatatctcaggctgacatttcccagtacaatgtttatgc 661
Query: 950 agaagacgaaggacattggaaatatccttttccagcggtcctccggttcaacttgaatca 1009
|||| || || |||||||| ||||| ||| |||| || ||||| || |||||| |||||
Sbjct: 660 agaacacaaatgacattgggaatattcttctccaccgatcctctggggcaacttcaatca 601
Query: 1010 ggggtttcgccttgaggacatggattgcaatgtaagctccaatggaagagcagatgaagt 1069
| |||||| |||||| | | |||||| |||||||||||||| |||||||| || ||||
Sbjct: 600 gtggtttcatcttgagaattttgattgcgatgtaagctccaatcgaagagcatataaagt 541
Query: 1070 ggacgcaggacacggtgagagggaacttgaaatccagtttctggaagatccacttgttca 1129
|||| || || || || |||||||||||||| |||| ||||||||||||||| |||||||
Sbjct: 540 ggacacacgagacagtaagagggaacttgaactccaatttctggaagatccatttgttca 481
Query: 1130 tgatgatgacagtgacgttgaagccccaccactggaggat 1169
|||||||||| |||||||||||||||||||| ||||||||
Sbjct: 480 tgatgatgacggtgacgttgaagccccaccattggaggat 441
>gb|CF326695.1|CF326695 JMT1--06-M11.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--06-M11, mRNA sequence
Length = 514
Score = 585 bits (295), Expect = e-164
Identities = 451/503 (89%)
Strand = Plus / Minus
Query: 625 ggtgccatgtagtacaccgtgttaatgctgtcaaacttgtatccatggagtagggactct 684
||||||||||||||||| ||||||||||||||||| |||||||| |||||||| ||||||
Sbjct: 514 ggtgccatgtagtacactgtgttaatgctgtcaaatttgtatccgtggagtagagactct 455
Query: 685 gccaagatggtctttgtagacgtagccaggcagccaaccatggcagcacagaaaccgaaa 744
||||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||
Sbjct: 454 gccaaaatggtcttggtagatgtagcaaggcagccaaccatggcagcacagaaaccaaac 395
Query: 745 atgttgaagctaagctctgtcaccgaagtcaggagtattccgccaactatagggaccagc 804
|||||||| ||||||||||| | ||||| ||||||||||| |||||||| |||||||||
Sbjct: 394 atgttgaaactaagctctgttattgaagttaggagtattcccccaactattgggaccagc 335
Query: 805 gaagcccatatgcgccactcgaaatgcttgctccagactagccactgcagaataactgtg 864
|||||||||||||||||||| |||||||||||||| |||| ||||||||||||||| |||
Sbjct: 334 gaagcccatatgcgccactcaaaatgcttgctccaaactaaccactgcagaataaccgtg 275
Query: 865 gttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgcaagctg 924
|||||||| |||||||||||||| |||||||| |||||||||||||||||||||| ||||
Sbjct: 274 gttgcaggggtgaaagatttgatagtctgcataaaggagactgggatgtagcgcaggctg 215
Query: 925 acatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttttccag 984
|||||||| ||||| ||||||||||||||||| || ||||||||||| |||||| ||||
Sbjct: 214 acatttccgagcacgatgtttatgcagaagacaaatgacattggaaaaatccttctccaa 155
Query: 985 cggtcctccggttcaacttgaatcaggggtttcgccttgaggacatggattgcaatgtaa 1044
||||| | ||||| |||||||| || ||||| || ||||| |||||||||||||| |||
Sbjct: 154 cggtcttatggttcgacttgaatgagtggttttgctttgagcacatggattgcaatataa 95
Query: 1045 gctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatcc 1104
|| ||||| |||||||| ||||||||||| || ||||| || ||||| || |||||||||
Sbjct: 94 gccccaattgaagagcatatgaagtggacacaagacaccgtcagaggaaatttgaaatcc 35
Query: 1105 agtttctggaagatccacttgtt 1127
|| ||||||||||||||||||||
Sbjct: 34 agcttctggaagatccacttgtt 12
>gb|C27462.1|C27462 C27462 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C51937_1A, mRNA sequence
Length = 437
Score = 505 bits (255), Expect = e-140
Identities = 366/404 (90%)
Strand = Plus / Minus
Query: 595 gctggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaatgctg 654
|||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 404 gctggtagagccngtatcatggtggcaaagggtnccatgtagtacactgtgttaatgctg 345
Query: 655 tcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagccagg 714
||||| |||||||| || ||||| ||||||||||| |||||||| ||||| ||||| |||
Sbjct: 344 tcaaatttgtatccgtgaagtagagactctgccaaaatggtcttggtagatgtagcaagg 285
Query: 715 cagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaagtc 774
|||||||||||||||||||||||||| || |||||||| ||||||||||| | |||||
Sbjct: 284 cagccaaccatggcagcacagaaaccaaacatgttgaaactaagctctgttattgaagtt 225
Query: 775 aggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaatgcttg 834
||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 224 aggagtattcccccaactattgggaccagcgaagcccatatgcgccactcaaaatgcttg 165
Query: 835 ctccagactagccactgcagaataactgtggttgcaggagtgaaagatttgattgtctgc 894
||||| |||| ||||||||||||||| ||||||||||| |||||||||||||| ||||||
Sbjct: 164 ctccaaactaaccactgcagaataaccgtggttgcaggggtgaaagatttgatagtctgc 105
Query: 895 atgaaggagactgggatgtagcgcaagctgacatttcccagcacaatgtttatgcagaag 954
|| |||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||
Sbjct: 104 ataaaggagactgggatgtagcgcaggctgacatttccgagcacgatgtttatgcagaag 45
Query: 955 acgaaggacattggaaatatccttttccagcggtcctccggttc 998
|| || |||||||| || |||||| |||| ||||| || |||||
Sbjct: 44 acaaatgacattggnaaaatccttctccaacggtcttctggttc 1
>gb|C97784.1|C97784 C97784 Rice callus Oryza sativa (japonica cultivar-group) cDNA clone
C62862_2A, mRNA sequence
Length = 365
Score = 385 bits (194), Expect = e-104
Identities = 316/354 (89%), Gaps = 2/354 (0%)
Strand = Plus / Minus
Query: 706 gtagccaggcagcc-aaccatggcagcaca-gaaaccgaaaatgttgaagctaagctctg 763
||||| |||||||| ||||||||||||||| |||||| || |||||||| ||||||||||
Sbjct: 354 gtagcaaggcagcccaaccatggcagcacaagaaaccaaacatgttgaaactaagctctg 295
Query: 764 tcaccgaagtcaggagtattccgccaactatagggaccagcgaagcccatatgcgccact 823
| | ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 294 ttattgaagttaggagtattcccccaactattgggaccagcgaagcccatatgcgccact 235
Query: 824 cgaaatgcttgctccagactagccactgcagaataactgtggttgcaggagtgaaagatt 883
| |||||||||||||| |||| ||||||||||||||| ||||||||||| ||||||||||
Sbjct: 234 caaaatgcttgctccaaactaaccactgcagaataaccgtggttgcaggggtgaaagatt 175
Query: 884 tgattgtctgcatgaaggagactgggatgtagcgcaagctgacatttcccagcacaatgt 943
|||| |||||||| |||||||||||||||||||||| |||||||||||| ||||| ||||
Sbjct: 174 tgatagtctgcataaaggagactgggatgtagcgcaggctgacatttccgagcacgatgt 115
Query: 944 ttatgcagaagacgaaggacattggaaatatccttttccagcggtcctccggttcaactt 1003
||||||||||||| || ||||||||||| |||||| |||| ||||| || ||||| ||||
Sbjct: 114 ttatgcagaagacaaatgacattggaaaaatccttctccaacggtcttctggttcgactt 55
Query: 1004 gaatcaggggtttcgccttgaggacatggattgcaatgtaagctccaatggaag 1057
|||| || ||||| || ||||| |||||||||||||| ||||| ||||| ||||
Sbjct: 54 gaatgagtggttttgctttgagcacatggattgcaatataagccccaattgaag 1
>gb|CF318828.1|CF318828 HD--09-B19.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--09-B19, mRNA sequence
Length = 631
Score = 377 bits (190), Expect = e-101
Identities = 298/334 (89%)
Strand = Plus / Minus
Query: 863 tggttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgcaagc 922
|||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| ||
Sbjct: 631 tggttgcaggggtgaaagatttgatagtctgcataaaggagactgggatgtagcgcaggc 572
Query: 923 tgacatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttttcc 982
|||||||||| ||||| ||||||||||||||||| || ||||||||||| |||||| |||
Sbjct: 571 tgacatttccgagcacgatgtttatgcagaagacaaatgacattggaaaaatccttctcc 512
Query: 983 agcggtcctccggttcaacttgaatcaggggtttcgccttgaggacatggattgcaatgt 1042
| ||||| || ||||| |||||||| || ||||| || ||||| |||||||||||||| |
Sbjct: 511 aacggtcttctggttcgacttgaatgagtggttttgctttgagcacatggattgcaatat 452
Query: 1043 aagctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaat 1102
|||| ||||| |||||||| ||||||||||| || |||| || ||||| || |||||||
Sbjct: 451 aagccccaattgaagagcatatgaagtggacacaagacaacgtcagaggaaatttgaaat 392
Query: 1103 ccagtttctggaagatccacttgttcatgatgatgacagtgacgttgaagccccaccact 1162
|||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 391 ccagcttctggaagatccacttgttgatgatgatgacggtgacgttgaagccccaccact 332
Query: 1163 ggaggatggcgagcaccgcgcgcagggtgcccag 1196
|||||||||| |||| |||||||||| |||||||
Sbjct: 331 ggaggatggccagcagcgcgcgcaggttgcccag 298
>gb|CF316595.1|CF316595 HD--05-P03.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--05-P03, mRNA sequence
Length = 668
Score = 375 bits (189), Expect = e-101
Identities = 294/329 (89%)
Strand = Plus / Minus
Query: 868 gcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgcaagctgaca 927
||||| |||||||||||||| |||||||| |||||||||||||||||||||| |||||||
Sbjct: 668 gcaggggtgaaagatttgatagtctgcataaaggagactgggatgtagcgcaggctgaca 609
Query: 928 tttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttttccagcgg 987
||||| ||||| ||||||||||||||||| || ||||||||||| |||||| |||| |||
Sbjct: 608 tttccgagcacgatgtttatgcagaagacaaatgacattggaaaaatccttctccaacgg 549
Query: 988 tcctccggttcaacttgaatcaggggtttcgccttgaggacatggattgcaatgtaagct 1047
|| || ||||| |||||||| || ||||| || ||||| |||||||||||||| |||||
Sbjct: 548 tcttctggttcgacttgaatgagtggttttgctttgagcacatggattgcaatataagcc 489
Query: 1048 ccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatccagt 1107
||||| |||||||| ||||||||||| || ||||| || ||||| || |||||||||||
Sbjct: 488 ccaattgaagagcatatgaagtggacacaagacaccgtcagaggaaatttgaaatccagc 429
Query: 1108 ttctggaagatccacttgttcatgatgatgacagtgacgttgaagccccaccactggagg 1167
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 428 ttctggaagatccacttgttgatgatgatgacggtgacgttgaagccccaccactggagg 369
Query: 1168 atggcgagcaccgcgcgcagggtgcccag 1196
||||| |||| |||||||||| |||||||
Sbjct: 368 atggccagcagcgcgcgcaggttgcccag 340
>gb|CB669323.1|CB669323 OSJNEe01L17.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe01L17 5', mRNA sequence
Length = 808
Score = 359 bits (181), Expect = 2e-096
Identities = 337/389 (86%)
Strand = Plus / Minus
Query: 781 attccgccaactatagggaccagcgaagcccatatgcgccactcgaaatgcttgctccag 840
||||| || ||||| || ||||| ||||||||||||||||||||||||| ||| ||||||
Sbjct: 751 attcctcccactattggtaccagagaagcccatatgcgccactcgaaatacttcctccag 692
Query: 841 actagccactgcagaataactgtggttgcaggagtgaaagatttgattgtctgcatgaag 900
|| | |||||||||||||||||| |||||||| ||||||||||| || ||||||||||||
Sbjct: 691 accaaccactgcagaataactgtcgttgcaggggtgaaagattttatggtctgcatgaag 632
Query: 901 gagactgggatgtagcgcaagctgacatttcccagcacaatgtttatgcagaagacgaag 960
|||||||| || || | || ||||||||||||||| ||||||||||||||||| || ||
Sbjct: 631 gagactggaatatatctcaggctgacatttcccagtacaatgtttatgcagaacacaaat 572
Query: 961 gacattggaaatatccttttccagcggtcctccggttcaacttgaatcaggggtttcgcc 1020
|||||||| ||||| ||| |||| || ||||| || |||||| |||||| |||||| |
Sbjct: 571 gacattgggaatattcttctccaccgatcctctggggcaacttcaatcagtggtttcatc 512
Query: 1021 ttgaggacatggattgcaatgtaagctccaatggaagagcagatgaagtggacgcaggac 1080
||||| | | |||||| |||||||||||||| |||||||| || |||||||| || ||
Sbjct: 511 ttgagaattttgattgcgatgtaagctccaatcgaagagcatataaagtggacacacgag 452
Query: 1081 acggtgagagggaacttgaaatccagtttctggaagatccacttgttcatgatgatgaca 1140
|| || |||||||||||||| |||| ||||||||||||||| |||||||||||||||||
Sbjct: 451 acagtaagagggaacttgaactccaatttctggaagatccatttgttcatgatgatgacg 392
Query: 1141 gtgacgttgaagccccaccactggaggat 1169
|||||||||||||||||||| ||||||||
Sbjct: 391 gtgacgttgaagccccaccattggaggat 363
>gb|CB656855.1|CB656855 OSJNEc11K10.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11K10 3', mRNA sequence
Length = 804
Score = 321 bits (162), Expect = 5e-085
Identities = 342/402 (85%)
Strand = Plus / Plus
Query: 297 gatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccacacccgat 356
||||| |||||||||||| ||||| ||||| || ||||| || ||||| | || |||||
Sbjct: 400 gatcaaatgcctcacatacccataaaaagtacagccaacgagcgtgatcgcgcatccgat 459
Query: 357 tgcattcattgcagagattggattccggaagatcgaccacgacactaacactgccaccgc 416
||||||||| | |||||| || |||||||||||| |||| ||||| || || || || ||
Sbjct: 460 tgcattcataggagagatagggttccggaagatcaaccatgacaccaatacagcaacagc 519
Query: 417 gactttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaa 476
||||| |||||||| ||||| ||||| |||||||| || ||||||||||| ||||||||
Sbjct: 520 aactttcaggttgccagcaacattgaaggtcactgcagtggttgaatggatcacgtagaa 579
Query: 477 gatggagaagttaaggcagaacgcaagcacccccgaacctaggatgatagtcagcgcagg 536
||||||||||| ||||| || |||||||| || || |||| ||||||| || ||||
Sbjct: 580 aatggagaagtttaggcaaaatgcaagcactccagagcctatgatgataactagtgcaga 639
Query: 537 aacgatggaatcatgtgtgtagaaccagttcattacacctcctccttcaagcaccatcgc 596
| | ||||| |||||||||||||||||| | | ||||| ||||||||||| | || ||
Sbjct: 640 agcaatggagtcatgtgtgtagaaccaggtaaccacaccgcctccttcaagtaacactgc 699
Query: 597 tggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaatgctgtc 656
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 700 tggtagagccagtatcatggtggcaaagggtgccatgtagtacactgtgttaatgctgtc 759
Query: 657 aaacttgtatccatggagtagggactctgccaagatggtctt 698
||| |||||||| |||||||| ||||||||||| ||||||||
Sbjct: 760 aaatttgtatccgtggagtagagactctgccaaaatggtctt 801
>gb|CF324244.1|CF324244 HDN--06-A08.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--06-A08, mRNA sequence
Length = 586
Score = 276 bits (139), Expect = 3e-071
Identities = 275/319 (86%), Gaps = 1/319 (0%)
Strand = Plus / Minus
Query: 851 gcagaataactgtggttgcaggagtgaaagatttgattgtctgcatgaaggagactggga 910
||||||||||||| |||||||| ||||||||||| || |||||||||||||||||||| |
Sbjct: 586 gcagaataactgtcgttgcaggggtgaaagattttatggtctgcatgaaggagactggaa 527
Query: 911 tgtagcgcaagctgacatttcccagcacaatgtttatgcagaagacgaaggacattggaa 970
| | | || ||||||||||||||| ||||||||||||||||| || || |||||||| |
Sbjct: 526 tatt-ctcaggctgacatttcccagtacaatgtttatgcagaacacaaatgacattggga 468
Query: 971 atatccttttccagcggtcctccggttcaacttgaatcaggggtttcgccttgaggacat 1030
|||| ||| |||| || ||||| || |||||| |||||| |||||| |||||| | |
Sbjct: 467 atattcttctccaccgatcctctggggcaacttcaatcagtggtttcatcttgagaattt 408
Query: 1031 ggattgcaatgtaagctccaatggaagagcagatgaagtggacgcaggacacggtgagag 1090
|||||| |||||||||||||| |||||||| || |||||||| || || || || ||||
Sbjct: 407 tgattgcgatgtaagctccaatcgaagagcatataaagtggacacacgagacagtaagag 348
Query: 1091 ggaacttgaaatccagtttctggaagatccacttgttcatgatgatgacagtgacgttga 1150
|||||||||| |||| ||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 347 ggaacttgaactccaatttctggaagatccatttgttcatgatgatgacggtgacgttga 288
Query: 1151 agccccaccactggaggat 1169
|||||||||| ||||||||
Sbjct: 287 agccccaccattggaggat 269
>gb|AACV01010712.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010712, whole
genome shotgun sequence
Length = 35002
Score = 268 bits (135), Expect = 7e-069
Identities = 192/211 (90%)
Strand = Plus / Minus
Query: 652 ctgtcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagcc 711
|||||||| |||||||| |||||||| ||||||||||| |||||||| ||||| |||||
Sbjct: 20847 ctgtcaaatttgtatccgtggagtagagactctgccaaaatggtcttggtagatgtagca 20788
Query: 712 aggcagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaa 771
||||||||||||||||||||||||||||| || |||||||| ||||||||||| | |||
Sbjct: 20787 aggcagccaaccatggcagcacagaaaccaaacatgttgaaactaagctctgttattgaa 20728
Query: 772 gtcaggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaatgc 831
|| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 20727 gttaggagtattcccccaactattgggaccagcgaagcccatatgcgccactcaaaatgc 20668
Query: 832 ttgctccagactagccactgcagaataactg 862
|||||||| |||| |||||||||||||||||
Sbjct: 20667 ttgctccaaactaaccactgcagaataactg 20637
Score = 258 bits (130), Expect = 7e-066
Identities = 220/250 (88%)
Strand = Plus / Minus
Query: 862 gtggttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgcaag 921
||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| |
Sbjct: 20510 gtggttgcaggggtgaaagatttgatagtctgcataaaggagactgggatgtagcgcagg 20451
Query: 922 ctgacatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttttc 981
||||||||||| ||||| ||||||||||||||||| || ||||||||||| |||||| ||
Sbjct: 20450 ctgacatttccgagcacgatgtttatgcagaagacaaatgacattggaaaaatccttctc 20391
Query: 982 cagcggtcctccggttcaacttgaatcaggggtttcgccttgaggacatggattgcaatg 1041
|| ||||| || ||||| |||||||| || ||||| || ||||| ||||||||||||||
Sbjct: 20390 caacggtcttctggttcgacttgaatgagtggttttgctttgagcacatggattgcaata 20331
Query: 1042 taagctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaa 1101
||||| ||||| |||||||| ||||||||||| || ||||| || ||||| || ||||||
Sbjct: 20330 taagccccaattgaagagcatatgaagtggacacaagacaccgtcagaggaaatttgaaa 20271
Query: 1102 tccagtttct 1111
||||| ||||
Sbjct: 20270 tccagcttct 20261
Score = 208 bits (105), Expect = 5e-051
Identities = 204/237 (86%)
Strand = Plus / Minus
Query: 418 actttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaag 477
||||| |||||||| ||||| ||||| |||||||| || ||||||||||| ||||||||
Sbjct: 21238 actttcaggttgccagcaacattgaaggtcactgcagtggttgaatggatcacgtagaaa 21179
Query: 478 atggagaagttaaggcagaacgcaagcacccccgaacctaggatgatagtcagcgcagga 537
||||||||||| ||||| || |||||||| || || |||| ||||||| || |||| |
Sbjct: 21178 atggagaagtttaggcaaaatgcaagcactccagagcctatgatgataactagtgcagaa 21119
Query: 538 acgatggaatcatgtgtgtagaaccagttcattacacctcctccttcaagcaccatcgct 597
| ||||| |||||||||||||||||| | | ||||| ||||||||||| | || |||
Sbjct: 21118 gcaatggagtcatgtgtgtagaaccaggtaaccacaccgcctccttcaagtaacactgct 21059
Query: 598 ggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaatgctg 654
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 21058 ggtagagccagtatcatggtggcaaagggtgccatgtagtacactgtgttaatgctg 21002
Score = 133 bits (67), Expect = 3e-028
Identities = 82/87 (94%)
Strand = Plus / Minus
Query: 1110 ctggaagatccacttgttcatgatgatgacagtgacgttgaagccccaccactggaggat 1169
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 19660 ctggaagatccacttgttgatgatgatgacggtgacgttgaagccccaccactggaggat 19601
Query: 1170 ggcgagcaccgcgcgcagggtgcccag 1196
||| |||| |||||||||| |||||||
Sbjct: 19600 ggccagcagcgcgcgcaggttgcccag 19574
Score = 73.8 bits (37), Expect = 2e-010
Identities = 88/105 (83%)
Strand = Plus / Minus
Query: 297 gatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccacacccgat 356
||||| |||||||||||| ||||| ||||| || ||||| || ||||| | || |||||
Sbjct: 21439 gatcaaatgcctcacatacccataaaaagtacagccaacgagcgtgatcgcgcatccgat 21380
Query: 357 tgcattcattgcagagattggattccggaagatcgaccacgacac 401
||||||||| | |||||| || |||||||||||| |||| |||||
Sbjct: 21379 tgcattcataggagagatagggttccggaagatcaaccatgacac 21335
>ref|NT_107201.1| Oryza sativa (japonica cultivar-group)
Length = 2893592
Score = 268 bits (135), Expect = 7e-069
Identities = 192/211 (90%)
Strand = Plus / Plus
Query: 652 ctgtcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagcc 711
|||||||| |||||||| |||||||| ||||||||||| |||||||| ||||| |||||
Sbjct: 2850168 ctgtcaaatttgtatccgtggagtagagactctgccaaaatggtcttggtagatgtagca 2850227
Query: 712 aggcagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaa 771
||||||||||||||||||||||||||||| || |||||||| ||||||||||| | |||
Sbjct: 2850228 aggcagccaaccatggcagcacagaaaccaaacatgttgaaactaagctctgttattgaa 2850287
Query: 772 gtcaggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaatgc 831
|| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 2850288 gttaggagtattcccccaactattgggaccagcgaagcccatatgcgccactcaaaatgc 2850347
Query: 832 ttgctccagactagccactgcagaataactg 862
|||||||| |||| |||||||||||||||||
Sbjct: 2850348 ttgctccaaactaaccactgcagaataactg 2850378
Score = 258 bits (130), Expect = 7e-066
Identities = 220/250 (88%)
Strand = Plus / Plus
Query: 862 gtggttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgcaag 921
||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| |
Sbjct: 2850505 gtggttgcaggggtgaaagatttgatagtctgcataaaggagactgggatgtagcgcagg 2850564
Query: 922 ctgacatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttttc 981
||||||||||| ||||| ||||||||||||||||| || ||||||||||| |||||| ||
Sbjct: 2850565 ctgacatttccgagcacgatgtttatgcagaagacaaatgacattggaaaaatccttctc 2850624
Query: 982 cagcggtcctccggttcaacttgaatcaggggtttcgccttgaggacatggattgcaatg 1041
|| ||||| || ||||| |||||||| || ||||| || ||||| ||||||||||||||
Sbjct: 2850625 caacggtcttctggttcgacttgaatgagtggttttgctttgagcacatggattgcaata 2850684
Query: 1042 taagctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaa 1101
||||| ||||| |||||||| ||||||||||| || ||||| || ||||| || ||||||
Sbjct: 2850685 taagccccaattgaagagcatatgaagtggacacaagacaccgtcagaggaaatttgaaa 2850744
Query: 1102 tccagtttct 1111
||||| ||||
Sbjct: 2850745 tccagcttct 2850754
Score = 208 bits (105), Expect = 5e-051
Identities = 204/237 (86%)
Strand = Plus / Plus
Query: 418 actttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaag 477
||||| |||||||| ||||| ||||| |||||||| || ||||||||||| ||||||||
Sbjct: 2849778 actttcaggttgccagcaacattgaaggtcactgcagtggttgaatggatcacgtagaaa 2849837
Query: 478 atggagaagttaaggcagaacgcaagcacccccgaacctaggatgatagtcagcgcagga 537
||||||||||| ||||| || |||||||| || || |||| ||||||| || |||| |
Sbjct: 2849838 atggagaagtttaggcaaaatgcaagcactccagagcctatgatgataactagtgcagaa 2849897
Query: 538 acgatggaatcatgtgtgtagaaccagttcattacacctcctccttcaagcaccatcgct 597
| ||||| |||||||||||||||||| | | ||||| ||||||||||| | || |||
Sbjct: 2849898 gcaatggagtcatgtgtgtagaaccaggtaaccacaccgcctccttcaagtaacactgct 2849957
Query: 598 ggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaatgctg 654
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2849958 ggtagagccagtatcatggtggcaaagggtgccatgtagtacactgtgttaatgctg 2850014
Score = 133 bits (67), Expect = 3e-028
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 1110 ctggaagatccacttgttcatgatgatgacagtgacgttgaagccccaccactggaggat 1169
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2851355 ctggaagatccacttgttgatgatgatgacggtgacgttgaagccccaccactggaggat 2851414
Query: 1170 ggcgagcaccgcgcgcagggtgcccag 1196
||| |||| |||||||||| |||||||
Sbjct: 2851415 ggccagcagcgcgcgcaggttgcccag 2851441
Score = 73.8 bits (37), Expect = 2e-010
Identities = 88/105 (83%)
Strand = Plus / Plus
Query: 297 gatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccacacccgat 356
||||| |||||||||||| ||||| ||||| || ||||| || ||||| | || |||||
Sbjct: 2849577 gatcaaatgcctcacatacccataaaaagtacagccaacgagcgtgatcgcgcatccgat 2849636
Query: 357 tgcattcattgcagagattggattccggaagatcgaccacgacac 401
||||||||| | |||||| || |||||||||||| |||| |||||
Sbjct: 2849637 tgcattcataggagagatagggttccggaagatcaaccatgacac 2849681
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 268 bits (135), Expect = 7e-069
Identities = 192/211 (90%)
Strand = Plus / Plus
Query: 652 ctgtcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagcc 711
|||||||| |||||||| |||||||| ||||||||||| |||||||| ||||| |||||
Sbjct: 13081723 ctgtcaaatttgtatccgtggagtagagactctgccaaaatggtcttggtagatgtagca 13081782
Query: 712 aggcagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaa 771
||||||||||||||||||||||||||||| || |||||||| ||||||||||| | |||
Sbjct: 13081783 aggcagccaaccatggcagcacagaaaccaaacatgttgaaactaagctctgttattgaa 13081842
Query: 772 gtcaggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaatgc 831
|| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 13081843 gttaggagtattcccccaactattgggaccagcgaagcccatatgcgccactcaaaatgc 13081902
Query: 832 ttgctccagactagccactgcagaataactg 862
|||||||| |||| |||||||||||||||||
Sbjct: 13081903 ttgctccaaactaaccactgcagaataactg 13081933
Score = 258 bits (130), Expect = 7e-066
Identities = 220/250 (88%)
Strand = Plus / Plus
Query: 862 gtggttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgcaag 921
||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| |
Sbjct: 13082060 gtggttgcaggggtgaaagatttgatagtctgcataaaggagactgggatgtagcgcagg 13082119
Query: 922 ctgacatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttttc 981
||||||||||| ||||| ||||||||||||||||| || ||||||||||| |||||| ||
Sbjct: 13082120 ctgacatttccgagcacgatgtttatgcagaagacaaatgacattggaaaaatccttctc 13082179
Query: 982 cagcggtcctccggttcaacttgaatcaggggtttcgccttgaggacatggattgcaatg 1041
|| ||||| || ||||| |||||||| || ||||| || ||||| ||||||||||||||
Sbjct: 13082180 caacggtcttctggttcgacttgaatgagtggttttgctttgagcacatggattgcaata 13082239
Query: 1042 taagctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaa 1101
||||| ||||| |||||||| ||||||||||| || ||||| || ||||| || ||||||
Sbjct: 13082240 taagccccaattgaagagcatatgaagtggacacaagacaccgtcagaggaaatttgaaa 13082299
Query: 1102 tccagtttct 1111
||||| ||||
Sbjct: 13082300 tccagcttct 13082309
Score = 208 bits (105), Expect = 5e-051
Identities = 204/237 (86%)
Strand = Plus / Plus
Query: 418 actttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaag 477
||||| |||||||| ||||| ||||| |||||||| || ||||||||||| ||||||||
Sbjct: 13081332 actttcaggttgccagcaacattgaaggtcactgcagtggttgaatggatcacgtagaaa 13081391
Query: 478 atggagaagttaaggcagaacgcaagcacccccgaacctaggatgatagtcagcgcagga 537
||||||||||| ||||| || |||||||| || || |||| ||||||| || |||| |
Sbjct: 13081392 atggagaagtttaggcaaaatgcaagcactccagagcctatgatgataactagtgcagaa 13081451
Query: 538 acgatggaatcatgtgtgtagaaccagttcattacacctcctccttcaagcaccatcgct 597
| ||||| |||||||||||||||||| | | ||||| ||||||||||| | || |||
Sbjct: 13081452 gcaatggagtcatgtgtgtagaaccaggtaaccacaccgcctccttcaagtaacactgct 13081511
Query: 598 ggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaatgctg 654
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 13081512 ggtagagccagtatcatggtggcaaagggtgccatgtagtacactgtgttaatgctg 13081568
Score = 133 bits (67), Expect = 3e-028
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 1110 ctggaagatccacttgttcatgatgatgacagtgacgttgaagccccaccactggaggat 1169
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 13082910 ctggaagatccacttgttgatgatgatgacggtgacgttgaagccccaccactggaggat 13082969
Query: 1170 ggcgagcaccgcgcgcagggtgcccag 1196
||| |||| |||||||||| |||||||
Sbjct: 13082970 ggccagcagcgcgcgcaggttgcccag 13082996
Score = 73.8 bits (37), Expect = 2e-010
Identities = 88/105 (83%)
Strand = Plus / Plus
Query: 297 gatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccacacccgat 356
||||| |||||||||||| ||||| ||||| || ||||| || ||||| | || |||||
Sbjct: 13081131 gatcaaatgcctcacatacccataaaaagtacagccaacgagcgtgatcgcgcatccgat 13081190
Query: 357 tgcattcattgcagagattggattccggaagatcgaccacgacac 401
||||||||| | |||||| || |||||||||||| |||| |||||
Sbjct: 13081191 tgcattcataggagagatagggttccggaagatcaaccatgacac 13081235
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 268 bits (135), Expect = 7e-069
Identities = 192/211 (90%)
Strand = Plus / Plus
Query: 652 ctgtcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagcc 711
|||||||| |||||||| |||||||| ||||||||||| |||||||| ||||| |||||
Sbjct: 32225822 ctgtcaaatttgtatccgtggagtagagactctgccaaaatggtcttggtagatgtagca 32225881
Query: 712 aggcagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaa 771
||||||||||||||||||||||||||||| || |||||||| ||||||||||| | |||
Sbjct: 32225882 aggcagccaaccatggcagcacagaaaccaaacatgttgaaactaagctctgttattgaa 32225941
Query: 772 gtcaggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaatgc 831
|| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 32225942 gttaggagtattcccccaactattgggaccagcgaagcccatatgcgccactcaaaatgc 32226001
Query: 832 ttgctccagactagccactgcagaataactg 862
|||||||| |||| |||||||||||||||||
Sbjct: 32226002 ttgctccaaactaaccactgcagaataactg 32226032
Score = 258 bits (130), Expect = 7e-066
Identities = 220/250 (88%)
Strand = Plus / Plus
Query: 862 gtggttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgcaag 921
||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| |
Sbjct: 32226159 gtggttgcaggggtgaaagatttgatagtctgcataaaggagactgggatgtagcgcagg 32226218
Query: 922 ctgacatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttttc 981
||||||||||| ||||| ||||||||||||||||| || ||||||||||| |||||| ||
Sbjct: 32226219 ctgacatttccgagcacgatgtttatgcagaagacaaatgacattggaaaaatccttctc 32226278
Query: 982 cagcggtcctccggttcaacttgaatcaggggtttcgccttgaggacatggattgcaatg 1041
|| ||||| || ||||| |||||||| || ||||| || ||||| ||||||||||||||
Sbjct: 32226279 caacggtcttctggttcgacttgaatgagtggttttgctttgagcacatggattgcaata 32226338
Query: 1042 taagctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaa 1101
||||| ||||| |||||||| ||||||||||| || ||||| || ||||| || ||||||
Sbjct: 32226339 taagccccaattgaagagcatatgaagtggacacaagacaccgtcagaggaaatttgaaa 32226398
Query: 1102 tccagtttct 1111
||||| ||||
Sbjct: 32226399 tccagcttct 32226408
Score = 208 bits (105), Expect = 5e-051
Identities = 204/237 (86%)
Strand = Plus / Plus
Query: 418 actttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaag 477
||||| |||||||| ||||| ||||| |||||||| || ||||||||||| ||||||||
Sbjct: 32225431 actttcaggttgccagcaacattgaaggtcactgcagtggttgaatggatcacgtagaaa 32225490
Query: 478 atggagaagttaaggcagaacgcaagcacccccgaacctaggatgatagtcagcgcagga 537
||||||||||| ||||| || |||||||| || || |||| ||||||| || |||| |
Sbjct: 32225491 atggagaagtttaggcaaaatgcaagcactccagagcctatgatgataactagtgcagaa 32225550
Query: 538 acgatggaatcatgtgtgtagaaccagttcattacacctcctccttcaagcaccatcgct 597
| ||||| |||||||||||||||||| | | ||||| ||||||||||| | || |||
Sbjct: 32225551 gcaatggagtcatgtgtgtagaaccaggtaaccacaccgcctccttcaagtaacactgct 32225610
Query: 598 ggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaatgctg 654
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 32225611 ggtagagccagtatcatggtggcaaagggtgccatgtagtacactgtgttaatgctg 32225667
Score = 133 bits (67), Expect = 3e-028
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 1110 ctggaagatccacttgttcatgatgatgacagtgacgttgaagccccaccactggaggat 1169
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 32227009 ctggaagatccacttgttgatgatgatgacggtgacgttgaagccccaccactggaggat 32227068
Query: 1170 ggcgagcaccgcgcgcagggtgcccag 1196
||| |||| |||||||||| |||||||
Sbjct: 32227069 ggccagcagcgcgcgcaggttgcccag 32227095
Score = 73.8 bits (37), Expect = 2e-010
Identities = 88/105 (83%)
Strand = Plus / Plus
Query: 297 gatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccacacccgat 356
||||| |||||||||||| ||||| ||||| || ||||| || ||||| | || |||||
Sbjct: 32225230 gatcaaatgcctcacatacccataaaaagtacagccaacgagcgtgatcgcgcatccgat 32225289
Query: 357 tgcattcattgcagagattggattccggaagatcgaccacgacac 401
||||||||| | |||||| || |||||||||||| |||| |||||
Sbjct: 32225290 tgcattcataggagagatagggttccggaagatcaaccatgacac 32225334
>emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020J19,
complete sequence
Length = 123272
Score = 268 bits (135), Expect = 7e-069
Identities = 192/211 (90%)
Strand = Plus / Plus
Query: 652 ctgtcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagcc 711
|||||||| |||||||| |||||||| ||||||||||| |||||||| ||||| |||||
Sbjct: 79848 ctgtcaaatttgtatccgtggagtagagactctgccaaaatggtcttggtagatgtagca 79907
Query: 712 aggcagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaa 771
||||||||||||||||||||||||||||| || |||||||| ||||||||||| | |||
Sbjct: 79908 aggcagccaaccatggcagcacagaaaccaaacatgttgaaactaagctctgttattgaa 79967
Query: 772 gtcaggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaatgc 831
|| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 79968 gttaggagtattcccccaactattgggaccagcgaagcccatatgcgccactcaaaatgc 80027
Query: 832 ttgctccagactagccactgcagaataactg 862
|||||||| |||| |||||||||||||||||
Sbjct: 80028 ttgctccaaactaaccactgcagaataactg 80058
Score = 258 bits (130), Expect = 7e-066
Identities = 220/250 (88%)
Strand = Plus / Plus
Query: 862 gtggttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgcaag 921
||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| |
Sbjct: 80185 gtggttgcaggggtgaaagatttgatagtctgcataaaggagactgggatgtagcgcagg 80244
Query: 922 ctgacatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttttc 981
||||||||||| ||||| ||||||||||||||||| || ||||||||||| |||||| ||
Sbjct: 80245 ctgacatttccgagcacgatgtttatgcagaagacaaatgacattggaaaaatccttctc 80304
Query: 982 cagcggtcctccggttcaacttgaatcaggggtttcgccttgaggacatggattgcaatg 1041
|| ||||| || ||||| |||||||| || ||||| || ||||| ||||||||||||||
Sbjct: 80305 caacggtcttctggttcgacttgaatgagtggttttgctttgagcacatggattgcaata 80364
Query: 1042 taagctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaa 1101
||||| ||||| |||||||| ||||||||||| || ||||| || ||||| || ||||||
Sbjct: 80365 taagccccaattgaagagcatatgaagtggacacaagacaccgtcagaggaaatttgaaa 80424
Query: 1102 tccagtttct 1111
||||| ||||
Sbjct: 80425 tccagcttct 80434
Score = 208 bits (105), Expect = 5e-051
Identities = 204/237 (86%)
Strand = Plus / Plus
Query: 418 actttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaag 477
||||| |||||||| ||||| ||||| |||||||| || ||||||||||| ||||||||
Sbjct: 79458 actttcaggttgccagcaacattgaaggtcactgcagtggttgaatggatcacgtagaaa 79517
Query: 478 atggagaagttaaggcagaacgcaagcacccccgaacctaggatgatagtcagcgcagga 537
||||||||||| ||||| || |||||||| || || |||| ||||||| || |||| |
Sbjct: 79518 atggagaagtttaggcaaaatgcaagcactccagagcctatgatgataactagtgcagaa 79577
Query: 538 acgatggaatcatgtgtgtagaaccagttcattacacctcctccttcaagcaccatcgct 597
| ||||| |||||||||||||||||| | | ||||| ||||||||||| | || |||
Sbjct: 79578 gcaatggagtcatgtgtgtagaaccaggtaaccacaccgcctccttcaagtaacactgct 79637
Query: 598 ggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaatgctg 654
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 79638 ggtagagccagtatcatggtggcaaagggtgccatgtagtacactgtgttaatgctg 79694
Score = 133 bits (67), Expect = 3e-028
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 1110 ctggaagatccacttgttcatgatgatgacagtgacgttgaagccccaccactggaggat 1169
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 81035 ctggaagatccacttgttgatgatgatgacggtgacgttgaagccccaccactggaggat 81094
Query: 1170 ggcgagcaccgcgcgcagggtgcccag 1196
||| |||| |||||||||| |||||||
Sbjct: 81095 ggccagcagcgcgcgcaggttgcccag 81121
Score = 73.8 bits (37), Expect = 2e-010
Identities = 88/105 (83%)
Strand = Plus / Plus
Query: 297 gatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccacacccgat 356
||||| |||||||||||| ||||| ||||| || ||||| || ||||| | || |||||
Sbjct: 79257 gatcaaatgcctcacatacccataaaaagtacagccaacgagcgtgatcgcgcatccgat 79316
Query: 357 tgcattcattgcagagattggattccggaagatcgaccacgacac 401
||||||||| | |||||| || |||||||||||| |||| |||||
Sbjct: 79317 tgcattcataggagagatagggttccggaagatcaaccatgacac 79361
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 268 bits (135), Expect = 7e-069
Identities = 192/211 (90%)
Strand = Plus / Plus
Query: 652 ctgtcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagcc 711
|||||||| |||||||| |||||||| ||||||||||| |||||||| ||||| |||||
Sbjct: 35455045 ctgtcaaatttgtatccgtggagtagagactctgccaaaatggtcttggtagatgtagca 35455104
Query: 712 aggcagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaa 771
||||||||||||||||||||||||||||| || |||||||| ||||||||||| | |||
Sbjct: 35455105 aggcagccaaccatggcagcacagaaaccaaacatgttgaaactaagctctgttattgaa 35455164
Query: 772 gtcaggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaatgc 831
|| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 35455165 gttaggagtattcccccaactattgggaccagcgaagcccatatgcgccactcaaaatgc 35455224
Query: 832 ttgctccagactagccactgcagaataactg 862
|||||||| |||| |||||||||||||||||
Sbjct: 35455225 ttgctccaaactaaccactgcagaataactg 35455255
Score = 258 bits (130), Expect = 7e-066
Identities = 220/250 (88%)
Strand = Plus / Plus
Query: 862 gtggttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgcaag 921
||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||| |
Sbjct: 35455382 gtggttgcaggggtgaaagatttgatagtctgcataaaggagactgggatgtagcgcagg 35455441
Query: 922 ctgacatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttttc 981
||||||||||| ||||| ||||||||||||||||| || ||||||||||| |||||| ||
Sbjct: 35455442 ctgacatttccgagcacgatgtttatgcagaagacaaatgacattggaaaaatccttctc 35455501
Query: 982 cagcggtcctccggttcaacttgaatcaggggtttcgccttgaggacatggattgcaatg 1041
|| ||||| || ||||| |||||||| || ||||| || ||||| ||||||||||||||
Sbjct: 35455502 caacggtcttctggttcgacttgaatgagtggttttgctttgagcacatggattgcaata 35455561
Query: 1042 taagctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaa 1101
||||| ||||| |||||||| ||||||||||| || ||||| || ||||| || ||||||
Sbjct: 35455562 taagccccaattgaagagcatatgaagtggacacaagacaccgtcagaggaaatttgaaa 35455621
Query: 1102 tccagtttct 1111
||||| ||||
Sbjct: 35455622 tccagcttct 35455631
Score = 208 bits (105), Expect = 5e-051
Identities = 204/237 (86%)
Strand = Plus / Plus
Query: 418 actttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaag 477
||||| |||||||| ||||| ||||| |||||||| || ||||||||||| ||||||||
Sbjct: 35454655 actttcaggttgccagcaacattgaaggtcactgcagtggttgaatggatcacgtagaaa 35454714
Query: 478 atggagaagttaaggcagaacgcaagcacccccgaacctaggatgatagtcagcgcagga 537
||||||||||| ||||| || |||||||| || || |||| ||||||| || |||| |
Sbjct: 35454715 atggagaagtttaggcaaaatgcaagcactccagagcctatgatgataactagtgcagaa 35454774
Query: 538 acgatggaatcatgtgtgtagaaccagttcattacacctcctccttcaagcaccatcgct 597
| ||||| |||||||||||||||||| | | ||||| ||||||||||| | || |||
Sbjct: 35454775 gcaatggagtcatgtgtgtagaaccaggtaaccacaccgcctccttcaagtaacactgct 35454834
Query: 598 ggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaatgctg 654
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 35454835 ggtagagccagtatcatggtggcaaagggtgccatgtagtacactgtgttaatgctg 35454891
Score = 133 bits (67), Expect = 3e-028
Identities = 82/87 (94%)
Strand = Plus / Plus
Query: 1110 ctggaagatccacttgttcatgatgatgacagtgacgttgaagccccaccactggaggat 1169
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 35456232 ctggaagatccacttgttgatgatgatgacggtgacgttgaagccccaccactggaggat 35456291
Query: 1170 ggcgagcaccgcgcgcagggtgcccag 1196
||| |||| |||||||||| |||||||
Sbjct: 35456292 ggccagcagcgcgcgcaggttgcccag 35456318
Score = 73.8 bits (37), Expect = 2e-010
Identities = 88/105 (83%)
Strand = Plus / Plus
Query: 297 gatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccacacccgat 356
||||| |||||||||||| ||||| ||||| || ||||| || ||||| | || |||||
Sbjct: 35454454 gatcaaatgcctcacatacccataaaaagtacagccaacgagcgtgatcgcgcatccgat 35454513
Query: 357 tgcattcattgcagagattggattccggaagatcgaccacgacac 401
||||||||| | |||||| || |||||||||||| |||| |||||
Sbjct: 35454514 tgcattcataggagagatagggttccggaagatcaaccatgacac 35454558
>gb|CB669324.1|CB669324 OSJNEe01L17.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe01L17 3', mRNA sequence
Length = 834
Score = 210 bits (106), Expect = 1e-051
Identities = 310/378 (82%)
Strand = Plus / Plus
Query: 290 gctgcgagatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccac 349
|||||||||| ||||||||||||||||||||||| ||||| || || || |||||| | |
Sbjct: 457 gctgcgagatgagatgcctcacatagccatagaaggtgcagccgacgagcgtgattgcgc 516
Query: 350 acccgattgcattcattgcagagattggattccggaagatcgaccacgacactaacactg 409
|||||| || ||||| || ||||| || |||||||||||| ||||||||| ||||| |
Sbjct: 517 acccgacagcgttcatcgcggagatcgggttccggaagatcatccacgacaccaacacag 576
Query: 410 ccaccgcgactttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatga 469
|||| || ||||| |||||||| || ||||| || || || || ||||| ||||||||||
Sbjct: 577 ccacagcaactttcaggttgccggctacgttaaaggtgacagccgttgtggaatggatga 636
Query: 470 cgtagaagatggagaagttaaggcagaacgcaagcacccccgaacctaggatgatagtca 529
||||||||||||||||||| ||||| || || || || || || |||||| |||
Sbjct: 637 cgtagaagatggagaagttgaggcaaaatgcgagtactccggaggtggtgatgatgatca 696
Query: 530 gcgcaggaacgatggaatcatgtgtgtagaaccagttcattacacctcctccttcaagca 589
| ||||| ||||||||||||| ||||||| ||| || || || || | ||||| ||||
Sbjct: 697 gtgcagggacgatggaatcatacgtgtagagccaattgatgacgccactcccttccagca 756
Query: 590 ccatcgctggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaa 649
| |||||||||| | |||||||||||| ||||| || |||||||||||||| |||||||
Sbjct: 757 caatcgctggtactgacagtatcatggttgcaaatggcgccatgtagtacacagtgttaa 816
Query: 650 tgctgtcaaacttgtatc 667
|||| ||||| |||||||
Sbjct: 817 tgctatcaaatttgtatc 834
>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1300_E01
Length = 103022
Score = 184 bits (93), Expect = 8e-044
Identities = 213/253 (84%)
Strand = Plus / Plus
Query: 860 ctgtggttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgca 919
|||| |||||||| ||||||||||| || |||||||||||||||||||| || || | ||
Sbjct: 30188 ctgtcgttgcaggggtgaaagattttatggtctgcatgaaggagactggaatatatctca 30247
Query: 920 agctgacatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttt 979
||||||||||||||| ||||||||||||||||| || || |||||||| ||||| |||
Sbjct: 30248 ggctgacatttcccagtacaatgtttatgcagaacacaaatgacattgggaatattcttc 30307
Query: 980 tccagcggtcctccggttcaacttgaatcaggggtttcgccttgaggacatggattgcaa 1039
|||| || ||||| || |||||| |||||| |||||| |||||| | | |||||| |
Sbjct: 30308 tccaccgatcctctggggcaacttcaatcagtggtttcatcttgagaattttgattgcga 30367
Query: 1040 tgtaagctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttga 1099
||||||||||||| |||||||| || |||||||| || || || || |||||||||||||
Sbjct: 30368 tgtaagctccaatcgaagagcatataaagtggacacacgagacagtaagagggaacttga 30427
Query: 1100 aatccagtttctg 1112
| |||| ||||||
Sbjct: 30428 actccaatttctg 30440
Score = 163 bits (82), Expect = 3e-037
Identities = 178/210 (84%)
Strand = Plus / Plus
Query: 655 tcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagccagg 714
||||| ||||||||||||||||| |||||||| | ||||||||| ||||| || ||||||
Sbjct: 29849 tcaaatttgtatccatggagtagagactctgcaaggatggtcttggtagatgttgccagg 29908
Query: 715 cagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaagtc 774
|| |||||||| |||||||| ||||| || |||||||| |||||||| || | || ||
Sbjct: 29909 caaccaaccatagcagcacaaaaaccaaacatgttgaaactaagctcagttattgatgtt 29968
Query: 775 aggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaatgcttg 834
| | ||||| || ||||| || ||||| ||||||||||||||||||||||||| |||
Sbjct: 29969 aacatgattcctcccactattggtaccagagaagcccatatgcgccactcgaaatacttc 30028
Query: 835 ctccagactagccactgcagaataactgtg 864
|||||||| | |||||||||||||||||||
Sbjct: 30029 ctccagaccaaccactgcagaataactgtg 30058
Score = 113 bits (57), Expect = 2e-022
Identities = 192/237 (81%)
Strand = Plus / Plus
Query: 418 actttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaag 477
||||| |||||||| || ||||| || || || || ||||| ||||||||||||||||||
Sbjct: 29470 actttcaggttgccggctacgttaaaggtgacagccgttgtggaatggatgacgtagaag 29529
Query: 478 atggagaagttaaggcagaacgcaagcacccccgaacctaggatgatagtcagcgcagga 537
||||||||||| ||||| || || || || || || |||||| |||| |||||
Sbjct: 29530 atggagaagttgaggcaaaatgcgagtactccggaggtggtgatgatgatcagtgcaggg 29589
Query: 538 acgatggaatcatgtgtgtagaaccagttcattacacctcctccttcaagcaccatcgct 597
||||||||||||| ||||||| ||| || || || || | ||||| ||||| ||||||
Sbjct: 29590 acgatggaatcatacgtgtagagccaattgatgacgccactcccttccagcacaatcgct 29649
Query: 598 ggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaatgctg 654
|||| | |||||||||||| ||||| || |||||||||||||| ||||||||||||
Sbjct: 29650 ggtactgacagtatcatggttgcaaatggcgccatgtagtacacagtgttaatgctg 29706
Score = 95.6 bits (48), Expect = 6e-017
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 1110 ctggaagatccacttgttcatgatgatgacagtgacgttgaagccccaccactggaggat 1169
|||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 31658 ctggaagatccatttgttcatgatgatgacggtgacgttgaagccccaccattggaggat 31717
Score = 95.6 bits (48), Expect = 6e-017
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 290 gctgcgagatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccac 349
|||||||||| ||||||||||||||||||||||| ||||| || || || |||||| | |
Sbjct: 29259 gctgcgagatgagatgcctcacatagccatagaaggtgcagccgacgagcgtgattgcgc 29318
Query: 350 acccgattgcattcattgcagagattggattccggaagatcgaccacgacactaacactg 409
|||||| || ||||| || ||||| || |||||||||||| ||||||||| ||||| |
Sbjct: 29319 acccgacagcgttcatcgcggagatcgggttccggaagatcatccacgacaccaacacag 29378
Query: 410 ccac 413
||||
Sbjct: 29379 ccac 29382
>gb|AACV01017099.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017099, whole
genome shotgun sequence
Length = 5755
Score = 184 bits (93), Expect = 8e-044
Identities = 213/253 (84%)
Strand = Plus / Plus
Query: 860 ctgtggttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgca 919
|||| |||||||| ||||||||||| || |||||||||||||||||||| || || | ||
Sbjct: 4011 ctgtcgttgcaggggtgaaagattttatggtctgcatgaaggagactggaatatatctca 4070
Query: 920 agctgacatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttt 979
||||||||||||||| ||||||||||||||||| || || |||||||| ||||| |||
Sbjct: 4071 ggctgacatttcccagtacaatgtttatgcagaacacaaatgacattgggaatattcttc 4130
Query: 980 tccagcggtcctccggttcaacttgaatcaggggtttcgccttgaggacatggattgcaa 1039
|||| || ||||| || |||||| |||||| |||||| |||||| | | |||||| |
Sbjct: 4131 tccaccgatcctctggggcaacttcaatcagtggtttcatcttgagaattttgattgcga 4190
Query: 1040 tgtaagctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttga 1099
||||||||||||| |||||||| || |||||||| || || || || |||||||||||||
Sbjct: 4191 tgtaagctccaatcgaagagcatataaagtggacacacgagacagtaagagggaacttga 4250
Query: 1100 aatccagtttctg 1112
| |||| ||||||
Sbjct: 4251 actccaatttctg 4263
Score = 163 bits (82), Expect = 3e-037
Identities = 178/210 (84%)
Strand = Plus / Plus
Query: 655 tcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagccagg 714
||||| ||||||||||||||||| |||||||| | ||||||||| ||||| || ||||||
Sbjct: 3672 tcaaatttgtatccatggagtagagactctgcaaggatggtcttggtagatgttgccagg 3731
Query: 715 cagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaagtc 774
|| |||||||| |||||||| ||||| || |||||||| |||||||| || | || ||
Sbjct: 3732 caaccaaccatagcagcacaaaaaccaaacatgttgaaactaagctcagttattgatgtt 3791
Query: 775 aggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaatgcttg 834
| | ||||| || ||||| || ||||| ||||||||||||||||||||||||| |||
Sbjct: 3792 aacatgattcctcccactattggtaccagagaagcccatatgcgccactcgaaatacttc 3851
Query: 835 ctccagactagccactgcagaataactgtg 864
|||||||| | |||||||||||||||||||
Sbjct: 3852 ctccagaccaaccactgcagaataactgtg 3881
Score = 113 bits (57), Expect = 2e-022
Identities = 192/237 (81%)
Strand = Plus / Plus
Query: 418 actttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaag 477
||||| |||||||| || ||||| || || || || ||||| ||||||||||||||||||
Sbjct: 3293 actttcaggttgccggctacgttaaaggtgacagccgttgtggaatggatgacgtagaag 3352
Query: 478 atggagaagttaaggcagaacgcaagcacccccgaacctaggatgatagtcagcgcagga 537
||||||||||| ||||| || || || || || || |||||| |||| |||||
Sbjct: 3353 atggagaagttgaggcaaaatgcgagtactccggaggtggtgatgatgatcagtgcaggg 3412
Query: 538 acgatggaatcatgtgtgtagaaccagttcattacacctcctccttcaagcaccatcgct 597
||||||||||||| ||||||| ||| || || || || | ||||| ||||| ||||||
Sbjct: 3413 acgatggaatcatacgtgtagagccaattgatgacgccactcccttccagcacaatcgct 3472
Query: 598 ggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaatgctg 654
|||| | |||||||||||| ||||| || |||||||||||||| ||||||||||||
Sbjct: 3473 ggtactgacagtatcatggttgcaaatggcgccatgtagtacacagtgttaatgctg 3529
Score = 95.6 bits (48), Expect = 6e-017
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 290 gctgcgagatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccac 349
|||||||||| ||||||||||||||||||||||| ||||| || || || |||||| | |
Sbjct: 3082 gctgcgagatgagatgcctcacatagccatagaaggtgcagccgacgagcgtgattgcgc 3141
Query: 350 acccgattgcattcattgcagagattggattccggaagatcgaccacgacactaacactg 409
|||||| || ||||| || ||||| || |||||||||||| ||||||||| ||||| |
Sbjct: 3142 acccgacagcgttcatcgcggagatcgggttccggaagatcatccacgacaccaacacag 3201
Query: 410 ccac 413
||||
Sbjct: 3202 ccac 3205
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 184 bits (93), Expect = 8e-044
Identities = 213/253 (84%)
Strand = Plus / Plus
Query: 860 ctgtggttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgca 919
|||| |||||||| ||||||||||| || |||||||||||||||||||| || || | ||
Sbjct: 30188 ctgtcgttgcaggggtgaaagattttatggtctgcatgaaggagactggaatatatctca 30247
Query: 920 agctgacatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttt 979
||||||||||||||| ||||||||||||||||| || || |||||||| ||||| |||
Sbjct: 30248 ggctgacatttcccagtacaatgtttatgcagaacacaaatgacattgggaatattcttc 30307
Query: 980 tccagcggtcctccggttcaacttgaatcaggggtttcgccttgaggacatggattgcaa 1039
|||| || ||||| || |||||| |||||| |||||| |||||| | | |||||| |
Sbjct: 30308 tccaccgatcctctggggcaacttcaatcagtggtttcatcttgagaattttgattgcga 30367
Query: 1040 tgtaagctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttga 1099
||||||||||||| |||||||| || |||||||| || || || || |||||||||||||
Sbjct: 30368 tgtaagctccaatcgaagagcatataaagtggacacacgagacagtaagagggaacttga 30427
Query: 1100 aatccagtttctg 1112
| |||| ||||||
Sbjct: 30428 actccaatttctg 30440
Score = 163 bits (82), Expect = 3e-037
Identities = 178/210 (84%)
Strand = Plus / Plus
Query: 655 tcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagccagg 714
||||| ||||||||||||||||| |||||||| | ||||||||| ||||| || ||||||
Sbjct: 29849 tcaaatttgtatccatggagtagagactctgcaaggatggtcttggtagatgttgccagg 29908
Query: 715 cagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaagtc 774
|| |||||||| |||||||| ||||| || |||||||| |||||||| || | || ||
Sbjct: 29909 caaccaaccatagcagcacaaaaaccaaacatgttgaaactaagctcagttattgatgtt 29968
Query: 775 aggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaatgcttg 834
| | ||||| || ||||| || ||||| ||||||||||||||||||||||||| |||
Sbjct: 29969 aacatgattcctcccactattggtaccagagaagcccatatgcgccactcgaaatacttc 30028
Query: 835 ctccagactagccactgcagaataactgtg 864
|||||||| | |||||||||||||||||||
Sbjct: 30029 ctccagaccaaccactgcagaataactgtg 30058
Score = 113 bits (57), Expect = 2e-022
Identities = 192/237 (81%)
Strand = Plus / Plus
Query: 418 actttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaag 477
||||| |||||||| || ||||| || || || || ||||| ||||||||||||||||||
Sbjct: 29470 actttcaggttgccggctacgttaaaggtgacagccgttgtggaatggatgacgtagaag 29529
Query: 478 atggagaagttaaggcagaacgcaagcacccccgaacctaggatgatagtcagcgcagga 537
||||||||||| ||||| || || || || || || |||||| |||| |||||
Sbjct: 29530 atggagaagttgaggcaaaatgcgagtactccggaggtggtgatgatgatcagtgcaggg 29589
Query: 538 acgatggaatcatgtgtgtagaaccagttcattacacctcctccttcaagcaccatcgct 597
||||||||||||| ||||||| ||| || || || || | ||||| ||||| ||||||
Sbjct: 29590 acgatggaatcatacgtgtagagccaattgatgacgccactcccttccagcacaatcgct 29649
Query: 598 ggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaatgctg 654
|||| | |||||||||||| ||||| || |||||||||||||| ||||||||||||
Sbjct: 29650 ggtactgacagtatcatggttgcaaatggcgccatgtagtacacagtgttaatgctg 29706
Score = 95.6 bits (48), Expect = 6e-017
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 1110 ctggaagatccacttgttcatgatgatgacagtgacgttgaagccccaccactggaggat 1169
|||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 31658 ctggaagatccatttgttcatgatgatgacggtgacgttgaagccccaccattggaggat 31717
Score = 95.6 bits (48), Expect = 6e-017
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 290 gctgcgagatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccac 349
|||||||||| ||||||||||||||||||||||| ||||| || || || |||||| | |
Sbjct: 29259 gctgcgagatgagatgcctcacatagccatagaaggtgcagccgacgagcgtgattgcgc 29318
Query: 350 acccgattgcattcattgcagagattggattccggaagatcgaccacgacactaacactg 409
|||||| || ||||| || ||||| || |||||||||||| ||||||||| ||||| |
Sbjct: 29319 acccgacagcgttcatcgcggagatcgggttccggaagatcatccacgacaccaacacag 29378
Query: 410 ccac 413
||||
Sbjct: 29379 ccac 29382
>gb|CH401228.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000065
genomic scaffold, whole genome shotgun sequence
Length = 5026603
Score = 184 bits (93), Expect = 8e-044
Identities = 213/253 (84%)
Strand = Plus / Plus
Query: 860 ctgtggttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgca 919
|||| |||||||| ||||||||||| || |||||||||||||||||||| || || | ||
Sbjct: 268104 ctgtcgttgcaggggtgaaagattttatggtctgcatgaaggagactggaatatatctca 268163
Query: 920 agctgacatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttt 979
||||||||||||||| ||||||||||||||||| || || |||||||| ||||| |||
Sbjct: 268164 ggctgacatttcccagtacaatgtttatgcagaacacaaatgacattgggaatattcttc 268223
Query: 980 tccagcggtcctccggttcaacttgaatcaggggtttcgccttgaggacatggattgcaa 1039
|||| || ||||| || |||||| |||||| |||||| |||||| | | |||||| |
Sbjct: 268224 tccaccgatcctctggggcaacttcaatcagtggtttcatcttgagaattttgattgcga 268283
Query: 1040 tgtaagctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttga 1099
||||||||||||| |||||||| || |||||||| || || || || |||||||||||||
Sbjct: 268284 tgtaagctccaatcgaagagcatataaagtggacacacgagacagtaagagggaacttga 268343
Query: 1100 aatccagtttctg 1112
| |||| ||||||
Sbjct: 268344 actccaatttctg 268356
Score = 163 bits (82), Expect = 3e-037
Identities = 178/210 (84%)
Strand = Plus / Plus
Query: 655 tcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagccagg 714
||||| ||||||||||||||||| |||||||| | ||||||||| ||||| || ||||||
Sbjct: 267765 tcaaatttgtatccatggagtagagactctgcaaggatggtcttggtagatgttgccagg 267824
Query: 715 cagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaagtc 774
|| |||||||| |||||||| ||||| || |||||||| |||||||| || | || ||
Sbjct: 267825 caaccaaccatagcagcacaaaaaccaaacatgttgaaactaagctcagttattgatgtt 267884
Query: 775 aggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaatgcttg 834
| | ||||| || ||||| || ||||| ||||||||||||||||||||||||| |||
Sbjct: 267885 aacatgattcctcccactattggtaccagagaagcccatatgcgccactcgaaatacttc 267944
Query: 835 ctccagactagccactgcagaataactgtg 864
|||||||| | |||||||||||||||||||
Sbjct: 267945 ctccagaccaaccactgcagaataactgtg 267974
Score = 113 bits (57), Expect = 2e-022
Identities = 192/237 (81%)
Strand = Plus / Plus
Query: 418 actttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaag 477
||||| |||||||| || ||||| || || || || ||||| ||||||||||||||||||
Sbjct: 267386 actttcaggttgccggctacgttaaaggtgacagccgttgtggaatggatgacgtagaag 267445
Query: 478 atggagaagttaaggcagaacgcaagcacccccgaacctaggatgatagtcagcgcagga 537
||||||||||| ||||| || || || || || || |||||| |||| |||||
Sbjct: 267446 atggagaagttgaggcaaaatgcgagtactccggaggtggtgatgatgatcagtgcaggg 267505
Query: 538 acgatggaatcatgtgtgtagaaccagttcattacacctcctccttcaagcaccatcgct 597
||||||||||||| ||||||| ||| || || || || | ||||| ||||| ||||||
Sbjct: 267506 acgatggaatcatacgtgtagagccaattgatgacgccactcccttccagcacaatcgct 267565
Query: 598 ggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaatgctg 654
|||| | |||||||||||| ||||| || |||||||||||||| ||||||||||||
Sbjct: 267566 ggtactgacagtatcatggttgcaaatggcgccatgtagtacacagtgttaatgctg 267622
Score = 95.6 bits (48), Expect = 6e-017
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 290 gctgcgagatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccac 349
|||||||||| ||||||||||||||||||||||| ||||| || || || |||||| | |
Sbjct: 267175 gctgcgagatgagatgcctcacatagccatagaaggtgcagccgacgagcgtgattgcgc 267234
Query: 350 acccgattgcattcattgcagagattggattccggaagatcgaccacgacactaacactg 409
|||||| || ||||| || ||||| || |||||||||||| ||||||||| ||||| |
Sbjct: 267235 acccgacagcgttcatcgcggagatcgggttccggaagatcatccacgacaccaacacag 267294
Query: 410 ccac 413
||||
Sbjct: 267295 ccac 267298
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 184 bits (93), Expect = 8e-044
Identities = 213/253 (84%)
Strand = Plus / Plus
Query: 860 ctgtggttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgca 919
|||| |||||||| ||||||||||| || |||||||||||||||||||| || || | ||
Sbjct: 268104 ctgtcgttgcaggggtgaaagattttatggtctgcatgaaggagactggaatatatctca 268163
Query: 920 agctgacatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttt 979
||||||||||||||| ||||||||||||||||| || || |||||||| ||||| |||
Sbjct: 268164 ggctgacatttcccagtacaatgtttatgcagaacacaaatgacattgggaatattcttc 268223
Query: 980 tccagcggtcctccggttcaacttgaatcaggggtttcgccttgaggacatggattgcaa 1039
|||| || ||||| || |||||| |||||| |||||| |||||| | | |||||| |
Sbjct: 268224 tccaccgatcctctggggcaacttcaatcagtggtttcatcttgagaattttgattgcga 268283
Query: 1040 tgtaagctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttga 1099
||||||||||||| |||||||| || |||||||| || || || || |||||||||||||
Sbjct: 268284 tgtaagctccaatcgaagagcatataaagtggacacacgagacagtaagagggaacttga 268343
Query: 1100 aatccagtttctg 1112
| |||| ||||||
Sbjct: 268344 actccaatttctg 268356
Score = 163 bits (82), Expect = 3e-037
Identities = 178/210 (84%)
Strand = Plus / Plus
Query: 655 tcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagccagg 714
||||| ||||||||||||||||| |||||||| | ||||||||| ||||| || ||||||
Sbjct: 267765 tcaaatttgtatccatggagtagagactctgcaaggatggtcttggtagatgttgccagg 267824
Query: 715 cagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaagtc 774
|| |||||||| |||||||| ||||| || |||||||| |||||||| || | || ||
Sbjct: 267825 caaccaaccatagcagcacaaaaaccaaacatgttgaaactaagctcagttattgatgtt 267884
Query: 775 aggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaatgcttg 834
| | ||||| || ||||| || ||||| ||||||||||||||||||||||||| |||
Sbjct: 267885 aacatgattcctcccactattggtaccagagaagcccatatgcgccactcgaaatacttc 267944
Query: 835 ctccagactagccactgcagaataactgtg 864
|||||||| | |||||||||||||||||||
Sbjct: 267945 ctccagaccaaccactgcagaataactgtg 267974
Score = 113 bits (57), Expect = 2e-022
Identities = 192/237 (81%)
Strand = Plus / Plus
Query: 418 actttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaag 477
||||| |||||||| || ||||| || || || || ||||| ||||||||||||||||||
Sbjct: 267386 actttcaggttgccggctacgttaaaggtgacagccgttgtggaatggatgacgtagaag 267445
Query: 478 atggagaagttaaggcagaacgcaagcacccccgaacctaggatgatagtcagcgcagga 537
||||||||||| ||||| || || || || || || |||||| |||| |||||
Sbjct: 267446 atggagaagttgaggcaaaatgcgagtactccggaggtggtgatgatgatcagtgcaggg 267505
Query: 538 acgatggaatcatgtgtgtagaaccagttcattacacctcctccttcaagcaccatcgct 597
||||||||||||| ||||||| ||| || || || || | ||||| ||||| ||||||
Sbjct: 267506 acgatggaatcatacgtgtagagccaattgatgacgccactcccttccagcacaatcgct 267565
Query: 598 ggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaatgctg 654
|||| | |||||||||||| ||||| || |||||||||||||| ||||||||||||
Sbjct: 267566 ggtactgacagtatcatggttgcaaatggcgccatgtagtacacagtgttaatgctg 267622
Score = 95.6 bits (48), Expect = 6e-017
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 290 gctgcgagatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccac 349
|||||||||| ||||||||||||||||||||||| ||||| || || || |||||| | |
Sbjct: 267175 gctgcgagatgagatgcctcacatagccatagaaggtgcagccgacgagcgtgattgcgc 267234
Query: 350 acccgattgcattcattgcagagattggattccggaagatcgaccacgacactaacactg 409
|||||| || ||||| || ||||| || |||||||||||| ||||||||| ||||| |
Sbjct: 267235 acccgacagcgttcatcgcggagatcgggttccggaagatcatccacgacaccaacacag 267294
Query: 410 ccac 413
||||
Sbjct: 267295 ccac 267298
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
complete sequence
Length = 28434780
Score = 184 bits (93), Expect = 8e-044
Identities = 213/253 (84%)
Strand = Plus / Plus
Query: 860 ctgtggttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgca 919
|||| |||||||| ||||||||||| || |||||||||||||||||||| || || | ||
Sbjct: 263762 ctgtcgttgcaggggtgaaagattttatggtctgcatgaaggagactggaatatatctca 263821
Query: 920 agctgacatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttt 979
||||||||||||||| ||||||||||||||||| || || |||||||| ||||| |||
Sbjct: 263822 ggctgacatttcccagtacaatgtttatgcagaacacaaatgacattgggaatattcttc 263881
Query: 980 tccagcggtcctccggttcaacttgaatcaggggtttcgccttgaggacatggattgcaa 1039
|||| || ||||| || |||||| |||||| |||||| |||||| | | |||||| |
Sbjct: 263882 tccaccgatcctctggggcaacttcaatcagtggtttcatcttgagaattttgattgcga 263941
Query: 1040 tgtaagctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttga 1099
||||||||||||| |||||||| || |||||||| || || || || |||||||||||||
Sbjct: 263942 tgtaagctccaatcgaagagcatataaagtggacacacgagacagtaagagggaacttga 264001
Query: 1100 aatccagtttctg 1112
| |||| ||||||
Sbjct: 264002 actccaatttctg 264014
Score = 163 bits (82), Expect = 3e-037
Identities = 178/210 (84%)
Strand = Plus / Plus
Query: 655 tcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagccagg 714
||||| ||||||||||||||||| |||||||| | ||||||||| ||||| || ||||||
Sbjct: 263423 tcaaatttgtatccatggagtagagactctgcaaggatggtcttggtagatgttgccagg 263482
Query: 715 cagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaagtc 774
|| |||||||| |||||||| ||||| || |||||||| |||||||| || | || ||
Sbjct: 263483 caaccaaccatagcagcacaaaaaccaaacatgttgaaactaagctcagttattgatgtt 263542
Query: 775 aggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaatgcttg 834
| | ||||| || ||||| || ||||| ||||||||||||||||||||||||| |||
Sbjct: 263543 aacatgattcctcccactattggtaccagagaagcccatatgcgccactcgaaatacttc 263602
Query: 835 ctccagactagccactgcagaataactgtg 864
|||||||| | |||||||||||||||||||
Sbjct: 263603 ctccagaccaaccactgcagaataactgtg 263632
Score = 113 bits (57), Expect = 2e-022
Identities = 192/237 (81%)
Strand = Plus / Plus
Query: 418 actttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaag 477
||||| |||||||| || ||||| || || || || ||||| ||||||||||||||||||
Sbjct: 263044 actttcaggttgccggctacgttaaaggtgacagccgttgtggaatggatgacgtagaag 263103
Query: 478 atggagaagttaaggcagaacgcaagcacccccgaacctaggatgatagtcagcgcagga 537
||||||||||| ||||| || || || || || || |||||| |||| |||||
Sbjct: 263104 atggagaagttgaggcaaaatgcgagtactccggaggtggtgatgatgatcagtgcaggg 263163
Query: 538 acgatggaatcatgtgtgtagaaccagttcattacacctcctccttcaagcaccatcgct 597
||||||||||||| ||||||| ||| || || || || | ||||| ||||| ||||||
Sbjct: 263164 acgatggaatcatacgtgtagagccaattgatgacgccactcccttccagcacaatcgct 263223
Query: 598 ggtagagccagtatcatggtggcaaagggtgccatgtagtacaccgtgttaatgctg 654
|||| | |||||||||||| ||||| || |||||||||||||| ||||||||||||
Sbjct: 263224 ggtactgacagtatcatggttgcaaatggcgccatgtagtacacagtgttaatgctg 263280
Score = 95.6 bits (48), Expect = 6e-017
Identities = 57/60 (95%)
Strand = Plus / Plus
Query: 1110 ctggaagatccacttgttcatgatgatgacagtgacgttgaagccccaccactggaggat 1169
|||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 265232 ctggaagatccatttgttcatgatgatgacggtgacgttgaagccccaccattggaggat 265291
Score = 95.6 bits (48), Expect = 6e-017
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 290 gctgcgagatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccac 349
|||||||||| ||||||||||||||||||||||| ||||| || || || |||||| | |
Sbjct: 262833 gctgcgagatgagatgcctcacatagccatagaaggtgcagccgacgagcgtgattgcgc 262892
Query: 350 acccgattgcattcattgcagagattggattccggaagatcgaccacgacactaacactg 409
|||||| || ||||| || ||||| || |||||||||||| ||||||||| ||||| |
Sbjct: 262893 acccgacagcgttcatcgcggagatcgggttccggaagatcatccacgacaccaacacag 262952
Query: 410 ccac 413
||||
Sbjct: 262953 ccac 262956
>gb|CF316596.1|CF316596 HD--05-P03.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--05-P03, mRNA sequence
Length = 595
Score = 172 bits (87), Expect = 3e-040
Identities = 240/291 (82%)
Strand = Plus / Plus
Query: 297 gatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccacacccgat 356
||||| |||||||||||| ||||| ||||| || ||||| || ||||| | || |||||
Sbjct: 292 gatcaaatgcctcacatacccataaaaagtacagccaacgagcgtgatcgcgcatccgat 351
Query: 357 tgcattcattgcagagattggattccggaagatcgaccacgacactaacactgccaccgc 416
||||||||| | |||||| || |||||||||||| |||| ||||| || || || || ||
Sbjct: 352 tgcattcataggagagatagggttccggaagatcaaccatgacaccaatacagcaacagc 411
Query: 417 gactttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaa 476
||||| |||||||| ||||| ||||| |||||||| || ||||||||||| ||||||||
Sbjct: 412 aactttcaggttgccagcaacattgaaggtcactgcagtggttgaatggatcacgtagaa 471
Query: 477 gatggagaagttaaggcagaacgcaagcacccccgaacctaggatgatagtcagcgcagg 536
||||||||||| ||||| || |||||||| || || |||| ||||||| || ||||
Sbjct: 472 aatggagaagtttaggcaaaatgcaagcactccagagcctatgatgataactagtgcaga 531
Query: 537 aacgatggaatcatgtgtgtagaaccagttcattacacctcctccttcaag 587
| | ||||| |||||||||||||||||| | | ||||| |||||||||||
Sbjct: 532 agcaatggagtcatgtgtgtagaaccaggtaaccacaccgcctccttcaag 582
>gb|D22398.2|D22398 RICC10958A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C10958_1A, mRNA sequence
Length = 215
Score = 172 bits (87), Expect = 3e-040
Identities = 128/142 (90%)
Strand = Plus / Minus
Query: 1055 aagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatccagtttctgga 1114
||||||| ||||||||||| || ||||| || ||||| || ||||||||||| |||||||
Sbjct: 192 aagagcatatgaagtggacacaagacaccgtcagaggaaatttgaaatccagcttctgga 133
Query: 1115 agatccacttgttcatgatgatgacagtgacgttgaagccccaccactggaggatggcga 1174
||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||| |
Sbjct: 132 agatccacttgttgatgatgatgacggtgacgttgaagccccacnactggaggatggcca 73
Query: 1175 gcaccgcgcgcagggtgcccag 1196
||| |||||||||| |||||||
Sbjct: 72 gcagcgcgcgcaggttgcccag 51
>gb|AU085897.1|AU085897 AU085897 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2310, mRNA sequence
Length = 709
Score = 161 bits (81), Expect = 1e-036
Identities = 174/205 (84%)
Strand = Plus / Minus
Query: 290 gctgcgagatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccac 349
|||||||||| ||||||||||||||||||||||| ||||| || || || |||||| | |
Sbjct: 320 gctgcgagatgagatgcctcacatagccatagaaggtgcagccgacgagcgtgattgcgc 261
Query: 350 acccgattgcattcattgcagagattggattccggaagatcgaccacgacactaacactg 409
|||||| || ||||| || ||||| || |||||||||||| ||||||||| ||||| |
Sbjct: 260 acccgacagcgttcatcgcggagatcgggttccggaagatcatccacgacaccaacacag 201
Query: 410 ccaccgcgactttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatga 469
|||| || ||||| |||||||| || ||||| || || || || ||||| ||||||||||
Sbjct: 200 ccacagcaactttcaggttgccggctacgttaaaggtgacagccgttgtggaatggatga 141
Query: 470 cgtagaagatggagaagttaaggca 494
||||||||||||||||||| |||||
Sbjct: 140 cgtagaagatggagaagttgaggca 116
>gb|CF280984.1|CF280984 14ETL--07-N20.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--07-N20, mRNA sequence
Length = 420
Score = 155 bits (78), Expect = 7e-035
Identities = 102/110 (92%)
Strand = Plus / Minus
Query: 1087 agagggaacttgaaatccagtttctggaagatccacttgttcatgatgatgacagtgacg 1146
||||| || ||||||||||| |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 418 agaggaaatttgaaatccagcttctggaagatccacttgttgatgatgatgacggtgacg 359
Query: 1147 ttgaagccccaccactggaggatggcgagcaccgcgcgcagggtgcccag 1196
|||||||||||||||||||||||||| |||| |||||||||| |||||||
Sbjct: 358 ttgaagccccaccactggaggatggccagcagcgcgcgcaggttgcccag 309
>gb|CF280988.1|CF280988 14ETL--07-N22.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--07-N22, mRNA sequence
Length = 447
Score = 155 bits (78), Expect = 7e-035
Identities = 102/110 (92%)
Strand = Plus / Minus
Query: 1087 agagggaacttgaaatccagtttctggaagatccacttgttcatgatgatgacagtgacg 1146
||||| || ||||||||||| |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 443 agaggaaatttgaaatccagcttctggaagatccacttgttgatgatgatgacggtgacg 384
Query: 1147 ttgaagccccaccactggaggatggcgagcaccgcgcgcagggtgcccag 1196
|||||||||||||||||||||||||| |||| |||||||||| |||||||
Sbjct: 383 ttgaagccccaccactggaggatggccagcagcgcgcgcaggttgcccag 334
>dbj|AG021145.1| Oryza sativa (japonica cultivar-group) DNA, clone:H0626_4_201_1A, 3'
flanking sequence of Tos17 insertion in rice strain
H0626, genomic survey sequence
Length = 226
Score = 123 bits (62), Expect = 3e-025
Identities = 134/158 (84%)
Strand = Plus / Minus
Query: 860 ctgtggttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgca 919
|||| |||||||| ||||||||||| || |||||||||||||||||||| || || | ||
Sbjct: 186 ctgtcgttgcaggggtgaaagattttatggtctgcatgaaggagactggaatatatctca 127
Query: 920 agctgacatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttt 979
||||||||||||||| ||||||||||||||||| || || |||||||| ||||| |||
Sbjct: 126 ggctgacatttcccagtacaatgtttatgcagaacacaaatgacattgggaatattcttc 67
Query: 980 tccagcggtcctccggttcaacttgaatcaggggtttc 1017
|||| || ||||| | |||||| |||||| ||||||
Sbjct: 66 tccaccgatcctctgtggcaacttcaatcagtggtttc 29
>gb|CF327832.1|CF327832 NACL--02-H16.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--02-H16, mRNA sequence
Length = 549
Score = 123 bits (62), Expect = 3e-025
Identities = 173/210 (82%)
Strand = Plus / Plus
Query: 297 gatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccacacccgat 356
||||| |||||||||||| ||||| ||||| || ||||| || ||||| | || |||||
Sbjct: 269 gatcaaatgcctcacatacccataaaaagtacagccaacgagcgtgatcgcgcatccgat 328
Query: 357 tgcattcattgcagagattggattccggaagatcgaccacgacactaacactgccaccgc 416
||||||||| | | | || || |||||||||||| |||| ||||| || || || || ||
Sbjct: 329 tgcattcataggaaaaatagggttccggaagatcaaccatgacaccaatacagcaacagc 388
Query: 417 gactttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaa 476
||||| |||||||| ||||| ||||| |||||||| || ||||||||||| ||||| ||
Sbjct: 389 aactttcaggttgccagcaacattgaaggtcactgcagtggttgaatggatcacgtaaaa 448
Query: 477 gatggagaagttaaggcagaacgcaagcac 506
||||||||||| ||||| || ||||||||
Sbjct: 449 aatggagaagtttaggcaaaatgcaagcac 478
>dbj|AG209334.1| Oryza sativa (japonica cultivar-group) DNA, clone:NE6022_0_703_1A,
3' flanking sequence of Tos17 insertion in rice strain
NE6022, genomic survey sequence
Length = 166
Score = 119 bits (60), Expect = 4e-024
Identities = 108/124 (87%)
Strand = Plus / Minus
Query: 860 ctgtggttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgca 919
|||| |||||||| ||||||||||| || |||||||||||||||||||| || || | ||
Sbjct: 127 ctgtcgttgcaggggtgaaagattttatggtctgcatgaaggagactggaatatatctca 68
Query: 920 agctgacatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttt 979
||||||||||||||| ||||||||||||||||| || || |||||||| ||||| |||
Sbjct: 67 ggctgacatttcccagtacaatgtttatgcagaacacaaatgacattgggaatattcttc 8
Query: 980 tcca 983
||||
Sbjct: 7 tcca 4
>gb|CF318827.1|CF318827 HD--09-B19.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--09-B19, mRNA sequence
Length = 601
Score = 103 bits (52), Expect = 2e-019
Identities = 145/176 (82%)
Strand = Plus / Plus
Query: 297 gatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccacacccgat 356
||||| |||||||||||| ||||| ||||| || ||||| || ||||| | || |||||
Sbjct: 426 gatcaaatgcctcacatacccataaaaagtacagccaacgagcgtgatcgcgcatccgat 485
Query: 357 tgcattcattgcagagattggattccggaagatcgaccacgacactaacactgccaccgc 416
||||||||| | |||||| || |||||||||||| |||| | ||| || || || || ||
Sbjct: 486 tgcattcataggagagatagggttccggaagatcaaccatgtcaccaatacagcaacagc 545
Query: 417 gactttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgt 472
||||| |||||||| ||||| ||||| |||||||| || ||||||||||| ||||
Sbjct: 546 aactttcaggttgccagcaacattgaaggtcactgcagtggttgaatggatcacgt 601
>gb|CF317643.1|CF317643 HD--07-G16.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-G16, mRNA sequence
Length = 247
Score = 101 bits (51), Expect = 9e-019
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 1107 tttctggaagatccacttgttcatgatgatgacagtgacgttgaagccccaccactggag 1166
||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 245 tttctggaagatccatttgttcatgatgatgacggtgacgttgaagccccaccattggag 186
Query: 1167 gat 1169
|||
Sbjct: 185 gat 183
>gb|CF280989.1|CF280989 14ETL--07-N22.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--07-N22, mRNA sequence
Length = 507
Score = 73.8 bits (37), Expect = 2e-010
Identities = 88/105 (83%)
Strand = Plus / Plus
Query: 297 gatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccacacccgat 356
||||| |||||||||||| ||||| ||||| || ||||| || ||||| | || |||||
Sbjct: 387 gatcaaatgcctcacatacccataaaaagtacagccaacgagcgtgatcgcgcatccgat 446
Query: 357 tgcattcattgcagagattggattccggaagatcgaccacgacac 401
||||||||| | |||||| || |||||||||||| |||| |||||
Sbjct: 447 tgcattcataggagagatagggttccggaagatcaaccatgacac 491
>gb|CF337102.1|CF337102 JMT--07-G16.g1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--07-G16, mRNA sequence
Length = 556
Score = 67.9 bits (34), Expect = 1e-008
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 290 gctgcgagatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccac 349
|||||||||| ||||||||||||||||||||||| ||||| || || || |||||| | |
Sbjct: 486 gctgcgagatgagatgcctcacatagccatagaaggtgcagccgacgagcgtgattgcgc 545
Query: 350 acccga 355
||||||
Sbjct: 546 acccga 551
>gb|AU160841.1|AU160841 AU160841 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C51937, mRNA sequence
Length = 345
Score = 58.0 bits (29), Expect = 1e-005
Identities = 81/99 (81%)
Strand = Plus / Minus
Query: 297 gatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccacacccgat 356
||||| |||||||||||| ||||| |||| || ||||| | ||||| | || |||||
Sbjct: 136 gatcaaatgcctcacatacccataaaaagnacagccaacgancgtgatcgcgcatccgat 77
Query: 357 tgcattcattgcagagattggattccggaagatcgacca 395
||||||||| | |||||| || |||||||||||| ||||
Sbjct: 76 tgcattcataggagagatagggttccggaagatcaacca 38
>gb|CF280985.1|CF280985 14ETL--07-N20.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--07-N20, mRNA sequence
Length = 416
Score = 50.1 bits (25), Expect = 0.003
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 297 gatcagatgcctcacatagccatagaaagtgcaaccaaccagggtgattccacacccgat 356
||||| |||||||||||| ||||| ||||| || ||||| || ||||| | || |||||
Sbjct: 347 gatcaaatgcctcacatacccataaaaagtacagccaacgagcgtgatcgcgcatccgat 406
Query: 357 tgcattcat 365
|||||||||
Sbjct: 407 tgcattcat 415
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 44.1 bits (22), Expect = 0.19
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1200 ggccggcgccttgccgccgtcc 1221
||||||||||||||||||||||
Sbjct: 214889 ggccggcgccttgccgccgtcc 214868
>dbj|AP003622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0633E08
Length = 136471
Score = 44.1 bits (22), Expect = 0.19
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1200 ggccggcgccttgccgccgtcc 1221
||||||||||||||||||||||
Sbjct: 36427 ggccggcgccttgccgccgtcc 36406
>gb|AACV01014438.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014438, whole
genome shotgun sequence
Length = 43736
Score = 44.1 bits (22), Expect = 0.19
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1200 ggccggcgccttgccgccgtcc 1221
||||||||||||||||||||||
Sbjct: 29850 ggccggcgccttgccgccgtcc 29871
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 44.1 bits (22), Expect = 0.19
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1200 ggccggcgccttgccgccgtcc 1221
||||||||||||||||||||||
Sbjct: 4079341 ggccggcgccttgccgccgtcc 4079320
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 44.1 bits (22), Expect = 0.19
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1200 ggccggcgccttgccgccgtcc 1221
||||||||||||||||||||||
Sbjct: 21778078 ggccggcgccttgccgccgtcc 21778057
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 44.1 bits (22), Expect = 0.19
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1200 ggccggcgccttgccgccgtcc 1221
||||||||||||||||||||||
Sbjct: 22749476 ggccggcgccttgccgccgtcc 22749455
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,744,695
Number of Sequences: 438736
Number of extensions: 1744695
Number of successful extensions: 9918
Number of sequences better than 0.5: 50
Number of HSP's better than 0.5 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9562
Number of HSP's gapped (non-prelim): 331
length of query: 1279
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1258
effective length of database: 2,791,206,460
effective search space: 3511337726680
effective search space used: 3511337726680
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)