BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493944.2.1
(2055 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK072276.1| Oryza sativa (japonica cultivar-group) cDNA... 521 e-145
gb|AY578159.1| Oryza sativa (japonica cultivar-group) cell-... 521 e-145
ref|XM_472409.1| Oryza sativa (japonica cultivar-group), p... 502 e-139
gb|AACV01009704.1| Oryza sativa (japonica cultivar-group) c... 440 e-120
ref|NT_107198.1| Oryza sativa (japonica cultivar-group) 440 e-120
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 440 e-120
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 440 e-120
emb|AL662945.3|OSJN00141 Oryza sativa genomic DNA, chromoso... 440 e-120
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 440 e-120
gb|CB665439.1|CB665439 OSJNEd11N18.f OSJNEd Oryza sativa (j... 244 2e-061
gb|AY578158.1| Oryza sativa (japonica cultivar-group) cell-... 244 2e-061
dbj|AK121403.1| Oryza sativa (japonica cultivar-group) cDNA... 236 4e-059
dbj|AB073749.1| Oryza sativa (japonica cultivar-group) OsCI... 228 1e-056
gb|CB656705.1|CB656705 OSJNEc11F17.r OSJNEc Oryza sativa (j... 192 5e-046
gb|CB647638.1|CB647638 OSJNEb10K09.f OSJNEb Oryza sativa (j... 190 2e-045
gb|CB656668.1|CB656668 OSJNEc11E15.f OSJNEc Oryza sativa (j... 190 2e-045
gb|CB656704.1|CB656704 OSJNEc11F17.f OSJNEc Oryza sativa (j... 190 2e-045
gb|CB656730.1|CB656730 OSJNEc11G13.f OSJNEc Oryza sativa (j... 190 2e-045
gb|CB656758.1|CB656758 OSJNEc11H12.f OSJNEc Oryza sativa (j... 190 2e-045
gb|CB656698.1|CB656698 OSJNEc11F14.f OSJNEc Oryza sativa (j... 182 5e-043
gb|AU058270.1|AU058270 AU058270 Oryza sativa Nipponbare imm... 176 3e-041
gb|CB656696.1|CB656696 OSJNEc11F13.f OSJNEc Oryza sativa (j... 176 3e-041
gb|CB656699.1|CB656699 OSJNEc11F14.r OSJNEc Oryza sativa (j... 176 3e-041
gb|CB656756.1|CB656756 OSJNEc11H11.f OSJNEc Oryza sativa (j... 172 5e-040
gb|CB656759.1|CB656759 OSJNEc11H12.r OSJNEc Oryza sativa (j... 167 3e-038
gb|CZ553792.1|CZ553792 M0015449 AS_TRIM_TDNA_B1 Oryza sativ... 165 1e-037
gb|CB636196.1|CB636196 OSJNEa01G09.f OSJNEa Oryza sativa (j... 161 2e-036
gb|CB639875.1|CB639875 OSJNEa12F04.f OSJNEa Oryza sativa (j... 161 2e-036
gb|CB640745.1|CB640745 OSJNEa16D10.f OSJNEa Oryza sativa (j... 161 2e-036
gb|CB640790.1|CB640790 OSJNEa16G19.f OSJNEa Oryza sativa (j... 161 2e-036
gb|CB659515.1|CB659515 OSJNEc16J09.f OSJNEc Oryza sativa (j... 161 2e-036
gb|CB662770.1|CB662770 OSJNEd07B16.f OSJNEd Oryza sativa (j... 161 2e-036
dbj|AP004156.3| Oryza sativa (japonica cultivar-group) geno... 161 2e-036
dbj|AP005798.3| Oryza sativa (japonica cultivar-group) geno... 161 2e-036
gb|AACV01004580.1| Oryza sativa (japonica cultivar-group) c... 161 2e-036
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 161 2e-036
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 161 2e-036
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 161 2e-036
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 161 2e-036
gb|CB656731.1|CB656731 OSJNEc11G13.r OSJNEc Oryza sativa (j... 147 3e-032
gb|CB665440.1|CB665440 OSJNEd11N18.r OSJNEd Oryza sativa (j... 147 3e-032
gb|CB670406.1|CB670406 OSJNEe03H08.r OSJNEe Oryza sativa (j... 139 7e-030
dbj|AK120779.1| Oryza sativa (japonica cultivar-group) cDNA... 139 7e-030
gb|AACV01009702.1| Oryza sativa (japonica cultivar-group) c... 139 7e-030
ref|XM_472408.1| Oryza sativa (japonica cultivar-group), p... 139 7e-030
gb|AY578160.1| Oryza sativa (japonica cultivar-group) cell-... 139 7e-030
gb|CB656757.1|CB656757 OSJNEc11H11.r OSJNEc Oryza sativa (j... 133 4e-028
gb|CB656697.1|CB656697 OSJNEc11F13.r OSJNEc Oryza sativa (j... 131 2e-027
dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA... 125 1e-025
gb|CB647639.1|CB647639 OSJNEb10K09.r OSJNEb Oryza sativa (j... 123 4e-025
gb|CB656637.1|CB656637 OSJNEc11D13.f OSJNEc Oryza sativa (j... 103 4e-019
gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 ... 101 1e-018
gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC O... 101 1e-018
gb|AACV01007875.1| Oryza sativa (japonica cultivar-group) c... 101 1e-018
ref|XM_469625.1| Oryza sativa (japonica cultivar-group), mRNA 101 1e-018
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 101 1e-018
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 101 1e-018
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 101 1e-018
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 101 1e-018
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 101 1e-018
gb|CB638672.1|CB638672 OSJNEa07D22.r OSJNEa Oryza sativa (j... 86 9e-014
gb|AQ509935.1|AQ509935 nbxb0094F09r CUGI Rice BAC Library O... 84 3e-013
gb|CB662771.1|CB662771 OSJNEd07B16.r OSJNEd Oryza sativa (j... 84 3e-013
gb|CZ269598.1|CZ269598 UCDRGT1694_5.1 UCD RGT Rice Insertio... 80 5e-012
gb|CB675354.1|CB675354 OSJNEe11A24.f OSJNEe Oryza sativa (j... 80 5e-012
gb|CV721157.1|CV721157 YBH--03-B14.b1 Rice before heading y... 80 5e-012
dbj|AK065130.1| Oryza sativa (japonica cultivar-group) cDNA... 80 5e-012
dbj|AK099126.1| Oryza sativa (japonica cultivar-group) cDNA... 80 5e-012
dbj|AK099312.1| Oryza sativa (japonica cultivar-group) cDNA... 80 5e-012
gb|AACV01010189.1| Oryza sativa (japonica cultivar-group) c... 80 5e-012
ref|XM_473317.1| Oryza sativa (japonica cultivar-group), p... 80 5e-012
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 80 5e-012
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 80 5e-012
emb|AL662998.4|OSJN00196 Oryza sativa genomic DNA, chromoso... 80 5e-012
gb|CA755260.1|CA755260 BR030016000_PLATE_F02_14_025.ab1 OA ... 72 1e-009
gb|CB636780.1|CB636780 OSJNEa02K12.f OSJNEa Oryza sativa (j... 72 1e-009
gb|CB636782.1|CB636782 OSJNEa02K13.f OSJNEa Oryza sativa (j... 72 1e-009
gb|CB656568.1|CB656568 OSJNEc11B08.f OSJNEc Oryza sativa (j... 72 1e-009
gb|CB663099.1|CB663099 OSJNEd07L07.f OSJNEd Oryza sativa (j... 72 1e-009
gb|CB663202.1|CB663202 OSJNEd07O05.f OSJNEd Oryza sativa (j... 72 1e-009
gb|CB676021.1|CB676021 OSJNEe12A23.f OSJNEe Oryza sativa (j... 72 1e-009
dbj|AK067444.1| Oryza sativa (japonica cultivar-group) cDNA... 72 1e-009
dbj|AK072245.1| Oryza sativa (japonica cultivar-group) cDNA... 72 1e-009
dbj|AB154521.1| Oryza sativa (japonica cultivar-group) OsCI... 72 1e-009
dbj|AP004851.3| Oryza sativa (japonica cultivar-group) geno... 72 1e-009
gb|AACV01003168.1| Oryza sativa (japonica cultivar-group) c... 72 1e-009
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 72 1e-009
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 72 1e-009
gb|AY578161.1| Oryza sativa (japonica cultivar-group) cell-... 72 1e-009
gb|CB672111.1|CB672111 OSJNEe05P17.f OSJNEe Oryza sativa (j... 70 5e-009
gb|AU091974.1|AU091974 AU091974 Rice immature leaf includin... 62 1e-006
gb|CB636197.1|CB636197 OSJNEa01G09.r OSJNEa Oryza sativa (j... 58 2e-005
gb|CF295239.1|CF295239 30DGS--05-B08.b1 Rice leaf plasmid c... 58 2e-005
gb|AY037871.2| Oryza sativa soluble acid invertase bfruct3 ... 58 2e-005
dbj|AK108794.1| Oryza sativa (japonica cultivar-group) cDNA... 56 8e-005
ref|XM_474246.1| Oryza sativa (japonica cultivar-group), p... 56 8e-005
ref|NT_107079.1| Oryza sativa (japonica cultivar-group) 56 8e-005
dbj|AP005738.3| Oryza sativa (japonica cultivar-group) geno... 56 8e-005
gb|AY578162.1| Oryza sativa (japonica cultivar-group) cell-... 56 8e-005
gb|AY578165.1| Oryza sativa (japonica cultivar-group) cell-... 56 8e-005
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 56 8e-005
gb|AU056057.1|AU056057 AU056057 Oryza sativa mature leaf Ni... 52 0.001
dbj|AK069080.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.001
gb|AACV01006309.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
gb|AACV01019263.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
ref|XM_450319.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
ref|XM_450320.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
ref|XM_474245.1| Oryza sativa (japonica cultivar-group), p... 52 0.001
ref|NT_107201.1| Oryza sativa (japonica cultivar-group) 52 0.001
gb|CH401235.1| Oryza sativa (japonica cultivar-group) chrom... 52 0.001
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 52 0.001
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 52 0.001
gb|AY578163.1| Oryza sativa (japonica cultivar-group) cell-... 52 0.001
gb|AY578164.1| Oryza sativa (japonica cultivar-group) cell-... 52 0.001
emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromoso... 52 0.001
gb|AU184122.1|AU184122 AU184122 Rice root Oryza sativa (jap... 48 0.019
dbj|AG210430.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.076
dbj|AG210442.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.076
dbj|AG214704.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.076
dbj|AG024201.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.076
dbj|AG205539.1| Oryza sativa (japonica cultivar-group) DNA,... 46 0.076
dbj|AG022345.2| Oryza sativa (japonica cultivar-group) DNA,... 46 0.076
gb|AACV01003094.1| Oryza sativa (japonica cultivar-group) c... 46 0.076
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 46 0.076
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 46 0.076
dbj|AP004365.3| Oryza sativa (japonica cultivar-group) geno... 46 0.076
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.076
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.076
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 46 0.076
gb|AQ258089.1|AQ258089 nbxb0019N23f CUGI Rice BAC Library O... 44 0.30
gb|CB639245.1|CB639245 OSJNEa08N19.r OSJNEa Oryza sativa (j... 44 0.30
gb|CB656569.1|CB656569 OSJNEc11B08.r OSJNEc Oryza sativa (j... 44 0.30
gb|CB663100.1|CB663100 OSJNEd07L07.r OSJNEd Oryza sativa (j... 44 0.30
gb|CB663203.1|CB663203 OSJNEd07O05.r OSJNEd Oryza sativa (j... 44 0.30
gb|CB670475.1|CB670475 OSJNEe03J01.r OSJNEe Oryza sativa (j... 44 0.30
gb|CB676022.1|CB676022 OSJNEe12A23.r OSJNEe Oryza sativa (j... 44 0.30
gb|CB676547.1|CB676547 OSJNEe12N17.r OSJNEe Oryza sativa (j... 44 0.30
gb|CB681399.1|CB681399 OSJNEf07J09.r OSJNEf Oryza sativa (j... 44 0.30
gb|CV723874.1|CV723874 root--05-A22.g1 Rice root lambda pha... 44 0.30
dbj|AK061744.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.30
gb|AC090120.8| Oryza sativa chromosome 10 BAC OSJNBb0049A16... 44 0.30
gb|AC146481.2| Oryza sativa chromosome 10 B1288B10 genomic... 44 0.30
gb|AACV01021841.1| Oryza sativa (japonica cultivar-group) c... 44 0.30
ref|NM_197108.1| Oryza sativa (japonica cultivar-group) hyp... 44 0.30
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 44 0.30
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.30
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.30
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 44 0.30
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.30
>dbj|AK072276.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010O04, full
insert sequence
Length = 2089
Score = 521 bits (263), Expect = e-145
Identities = 553/647 (85%), Gaps = 12/647 (1%)
Strand = Plus / Minus
Query: 1232 accgggtagaagtcagggcactcccacatccccgtgggcgccgagtgcagcggccgccgc 1291
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 819 accgggtagaagtccgggcactcccacatccccgtgggcgccgagtgcagcggctgcgcc 760
Query: 1292 acccgcctccaccgccggaagtcgcggctacggtacacgtacgccacgccgcggggcggc 1351
| ||| |||||||||||||||| | ||| ||||||||||||||||||||||||| | ||
Sbjct: 759 gcgcgcgtccaccgccggaagtccctgctccggtacacgtacgccacgccgcgggactgc 700
Query: 1352 gacgaccccgccgcgctgccgacgagcagccgccactgctcggggccggggccgcgccag 1411
||||| ||||||||||||||||||||| || || ||| ||||||||
Sbjct: 699 ------cccgcgaggctgccgacgagcagccgccagtggccgt---cggccccgcgccac 649
Query: 1412 gccgtggtcgggtcgcggaactgcgtcacgttgatgccgccctcggggacgatgacgggg 1471
|| |||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||
Sbjct: 648 gcggtggtcgggtcgcggaactgcgtcgcgttgatgccgccctcgggcacgatcaccggg 589
Query: 1472 ttgtgcgagggcttcacccactcccggagcagcgggtccgacacgttcttcgggtacgcc 1531
||||| ||||||||||||||| || ||||||||||||||| ||||| |||| ||||
Sbjct: 588 ttgtggccgggcttcacccactcgcgcagcagcgggtccgacccgttcctcggcagcgcc 529
Query: 1532 acgttccggacctggtagttgatgtccgggtggtccacgcccgtgtacatgatcaccggg 1591
|||||| | ||||||||||||| ||| ||| ||| ||||| |||||||||||||||||
Sbjct: 528 acgttctgcacctggtagttgacgtcggggcggttgacgccggtgtacatgatcaccgg- 470
Query: 1592 ccgccgccgtcgggcagcaccgtcgccgacccggaccagcagccgtacctgtcgcccggg 1651
|| | ||||||| || || |||||||||||| ||||||||||||||| ||||| || |
Sbjct: 469 -cgtc-ccgtcggccatcatcgtcgccgaccccgaccagcagccgtacttgtcggccctg 412
Query: 1652 atgcttggtctgagcgccggctctagcgccacccagttgatgaggtctcgcgacaccgag 1711
||||| || || ||||||| ||||||||||||||||||||||| || ||||| |||
Sbjct: 411 atgctgggctcgatggccggcttgagcgccacccagttgatgaggtcacgtgacactgag 352
Query: 1712 tgcgcccacacgatgttgccccatacggcgcccttgggattgtattggtagaagaaatgg 1771
||||||||||||||||| ||||| |||||||||||||| ||||| |||||||| | ||||
Sbjct: 351 tgcgcccacacgatgttcccccacacggcgcccttggggttgtactggtagaacagatgg 292
Query: 1772 taccaccccttgtagtacatgggcgcgttgggatcattgatccagttcttggggggctgg 1831
|||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 291 taccaccccttgtagtacatcggcgcgttcggatcattgatccagttcttgggtggctgg 232
Query: 1832 aagtggtaccccgtcctgagcagggggttgacgatggacggcggcac 1878
||||| ||||| |||| |||| | || ||||||||||||||||||
Sbjct: 231 aagtgatacccagtccggagctcagagtcgacgatggacggcggcac 185
Score = 502 bits (253), Expect = e-139
Identities = 396/443 (89%), Gaps = 3/443 (0%)
Strand = Plus / Minus
Query: 734 tcgaagctcacctccacgtcagcctgtgccgtttgtatcccggtcacctcgacgtgatgt 793
||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |
Sbjct: 1332 tcgaagctcacctccacgtcagcctgtgcagtttgtagcccggtcacctcgacgtgttcc 1273
Query: 794 cctgccttgattaccctgttcctgagagtgaccg---actttgctctcagcgcctccacc 850
|||| ||||| ||||||| | ||||| |||||| |||| |||||||| ||| |||
Sbjct: 1272 cctggcttgaccaccctgtccttgagaatgaccggccacttccctctcagcctctcgacc 1213
Query: 851 tcctcgataggccactgcagcagctgcttcccactggggtccagccacaccgtccttgga 910
|||||||| |||||||||| ||| ||||||||||| |||||||||||||| |||| |||
Sbjct: 1212 tcctcgattggccactgcaacagttgcttcccacttgggtccagccacactttcctcgga 1153
Query: 911 atcgcctggattccagcccagcctttagccacatcgtcggcggcggtgtcggactcgtta 970
|||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 1152 atcgcctggattccggcccagcccttggccacgtcgtcggcggcggtgtcggactcgttg 1093
Query: 971 gcccagccccacaggatgcggcgccgcttggccgggtcgtagaacgtcttggacgcgtag 1030
||||| ||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 1092 gcccatccccagaggatgcggcggcgcttcgccgggtcgtagaacgtcttggaggcgtag 1033
Query: 1031 aagttgccgtagtcgtagcgcaggcggtgctcgtcgccggcggggtcgtccggcacgtac 1090
|||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||
Sbjct: 1032 aagttgccgtagtcgtagcggatgtggtgctcgtcgccggcggggtcgtccggcacgtac 973
Query: 1091 cgctcggccctcgggtggtacgtgcccacggtgtagtagtcgtaccgccggaggtcgagg 1150
||||||||| || ||| |||||| || |||||||||||||||||||| || |||||||||
Sbjct: 972 cgctcggccttccggtcgtacgttccgacggtgtagtagtcgtaccggcgcaggtcgagg 913
Query: 1151 ctgttcttgagcacgtgcttgac 1173
|||||||||||||||| ||||||
Sbjct: 912 ctgttcttgagcacgtacttgac 890
Score = 274 bits (138), Expect = 2e-070
Identities = 261/302 (86%)
Strand = Plus / Minus
Query: 237 tcatgaccggcttcttcatctcccacgcggtgagacgggacaccttgacgtgcgccctcc 296
|||||||||||||||||||||||||||||||||| | |||||||||| | |||| |||
Sbjct: 1835 tcatgaccggcttcttcatctcccacgcggtgagctgcgacaccttgatctccgccttcc 1776
Query: 297 cgttgttgaacacgtagaggcgagcgtccttgccgatggccagcgacgggtagaccctgg 356
|||| ||||| ||||| ||||| |||| |||||||||||||||||||||||| ||||| |
Sbjct: 1775 cgttattgaaaacgtaaaggcgcgcgttcttgccgatggccagcgacgggtacaccctcg 1716
Query: 357 agaggatgcaggtcttgcccccggctccgaagctctcaacgaccgaccggtcgatcaggc 416
| |||||||| | ||| || || || |||||||||||||| ||||||| |||||||||||
Sbjct: 1715 acaggatgcacgcctttcctccagccccgaagctctcaacaaccgacctgtcgatcaggc 1656
Query: 417 ttctcagggatatcttgccgttcgagatgtccgtgtcgacaaatcctgcaaatgtcgggc 476
| ||||| |||||||| ||||| | |||||||||||| || || |||||||| |||||
Sbjct: 1655 tcctcagagatatcttcccgttggtgatgtccgtgtcaacgaaccctgcaaacgtcggct 1596
Query: 477 ggtacaggttcgggttcagggacgacttggtagggtcggtgcacatgagcaccacgggct 536
|||||| ||||||||| | || |||||||| |||||||||||||||||||| |||||||
Sbjct: 1595 ggtacatgttcgggttgcgcgatgacttggtggggtcggtgcacatgagcacgacgggct 1536
Query: 537 tg 538
||
Sbjct: 1535 tg 1534
Score = 99.6 bits (50), Expect = 6e-018
Identities = 122/146 (83%)
Strand = Plus / Minus
Query: 555 tgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccaca 614
||||||||||||||||||| ||||| |||||| | ||||| || ||||||||||
Sbjct: 1505 tgaacaccctgaagaacacggcggtcttctcctccagccccgcggacgcgagcacccaca 1446
Query: 615 gcccgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccg 674
| |||||||||||||||||||||||| |||| |||| | | ||| |||||||| || ||
Sbjct: 1445 ggccgaacggccccacgccgcccctcgcgtcggcgccccgcgcgctgcacagccgctgcg 1386
Query: 675 cgtcgtaggccagcgccgggtccagc 700
||||||| |||| |||||||||||||
Sbjct: 1385 cgtcgtacgccatcgccgggtccagc 1360
Score = 48.1 bits (24), Expect = 0.019
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1924 gtagacgacatgcgacgctcctgcgagctgcaacagcagcagca 1967
||||||||| ||||||||||| ||||||||| ||||||||||
Sbjct: 142 gtagacgacgtgcgacgctccggcgagctgctggagcagcagca 99
>gb|AY578159.1| Oryza sativa (japonica cultivar-group) cell-wall invertase 2 mRNA,
complete cds
Length = 1995
Score = 521 bits (263), Expect = e-145
Identities = 553/647 (85%), Gaps = 12/647 (1%)
Strand = Plus / Minus
Query: 1232 accgggtagaagtcagggcactcccacatccccgtgggcgccgagtgcagcggccgccgc 1291
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 812 accgggtagaagtccgggcactcccacatccccgtgggcgccgagtgcagcggctgcgcc 753
Query: 1292 acccgcctccaccgccggaagtcgcggctacggtacacgtacgccacgccgcggggcggc 1351
| ||| |||||||||||||||| | ||| ||||||||||||||||||||||||| | ||
Sbjct: 752 gcgcgcgtccaccgccggaagtccctgctccggtacacgtacgccacgccgcgggactgc 693
Query: 1352 gacgaccccgccgcgctgccgacgagcagccgccactgctcggggccggggccgcgccag 1411
||||| ||||||||||||||||||||| || || ||| ||||||||
Sbjct: 692 ------cccgcgaggctgccgacgagcagccgccagtggccgt---cggccccgcgccac 642
Query: 1412 gccgtggtcgggtcgcggaactgcgtcacgttgatgccgccctcggggacgatgacgggg 1471
|| |||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||
Sbjct: 641 gcggtggtcgggtcgcggaactgcgtcgcgttgatgccgccctcgggcacgatcaccggg 582
Query: 1472 ttgtgcgagggcttcacccactcccggagcagcgggtccgacacgttcttcgggtacgcc 1531
||||| ||||||||||||||| || ||||||||||||||| ||||| |||| ||||
Sbjct: 581 ttgtggccgggcttcacccactcgcgcagcagcgggtccgacccgttcctcggcagcgcc 522
Query: 1532 acgttccggacctggtagttgatgtccgggtggtccacgcccgtgtacatgatcaccggg 1591
|||||| | ||||||||||||| ||| ||| ||| ||||| |||||||||||||||||
Sbjct: 521 acgttctgcacctggtagttgacgtcggggcggttgacgccggtgtacatgatcaccgg- 463
Query: 1592 ccgccgccgtcgggcagcaccgtcgccgacccggaccagcagccgtacctgtcgcccggg 1651
|| | ||||||| || || |||||||||||| ||||||||||||||| ||||| || |
Sbjct: 462 -cgtc-ccgtcggccatcatcgtcgccgaccccgaccagcagccgtacttgtcggccctg 405
Query: 1652 atgcttggtctgagcgccggctctagcgccacccagttgatgaggtctcgcgacaccgag 1711
||||| || || ||||||| ||||||||||||||||||||||| || ||||| |||
Sbjct: 404 atgctgggctcgatggccggcttgagcgccacccagttgatgaggtcacgtgacactgag 345
Query: 1712 tgcgcccacacgatgttgccccatacggcgcccttgggattgtattggtagaagaaatgg 1771
||||||||||||||||| ||||| |||||||||||||| ||||| |||||||| | ||||
Sbjct: 344 tgcgcccacacgatgttcccccacacggcgcccttggggttgtactggtagaacagatgg 285
Query: 1772 taccaccccttgtagtacatgggcgcgttgggatcattgatccagttcttggggggctgg 1831
|||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 284 taccaccccttgtagtacatcggcgcgttcggatcattgatccagttcttgggtggctgg 225
Query: 1832 aagtggtaccccgtcctgagcagggggttgacgatggacggcggcac 1878
||||| ||||| |||| |||| | || ||||||||||||||||||
Sbjct: 224 aagtgatacccagtccggagctcagagtcgacgatggacggcggcac 178
Score = 502 bits (253), Expect = e-139
Identities = 396/443 (89%), Gaps = 3/443 (0%)
Strand = Plus / Minus
Query: 734 tcgaagctcacctccacgtcagcctgtgccgtttgtatcccggtcacctcgacgtgatgt 793
||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |
Sbjct: 1325 tcgaagctcacctccacgtcagcctgtgcagtttgtagcccggtcacctcgacgtgttcc 1266
Query: 794 cctgccttgattaccctgttcctgagagtgaccg---actttgctctcagcgcctccacc 850
|||| ||||| ||||||| | ||||| |||||| |||| |||||||| ||| |||
Sbjct: 1265 cctggcttgaccaccctgtccttgagaatgaccggccacttccctctcagcctctcgacc 1206
Query: 851 tcctcgataggccactgcagcagctgcttcccactggggtccagccacaccgtccttgga 910
|||||||| |||||||||| ||| ||||||||||| |||||||||||||| |||| |||
Sbjct: 1205 tcctcgattggccactgcaacagttgcttcccacttgggtccagccacactttcctcgga 1146
Query: 911 atcgcctggattccagcccagcctttagccacatcgtcggcggcggtgtcggactcgtta 970
|||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 1145 atcgcctggattccggcccagcccttggccacgtcgtcggcggcggtgtcggactcgttg 1086
Query: 971 gcccagccccacaggatgcggcgccgcttggccgggtcgtagaacgtcttggacgcgtag 1030
||||| ||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 1085 gcccatccccagaggatgcggcggcgcttcgccgggtcgtagaacgtcttggaggcgtag 1026
Query: 1031 aagttgccgtagtcgtagcgcaggcggtgctcgtcgccggcggggtcgtccggcacgtac 1090
|||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||
Sbjct: 1025 aagttgccgtagtcgtagcggatgtggtgctcgtcgccggcggggtcgtccggcacgtac 966
Query: 1091 cgctcggccctcgggtggtacgtgcccacggtgtagtagtcgtaccgccggaggtcgagg 1150
||||||||| || ||| |||||| || |||||||||||||||||||| || |||||||||
Sbjct: 965 cgctcggccttccggtcgtacgttccgacggtgtagtagtcgtaccggcgcaggtcgagg 906
Query: 1151 ctgttcttgagcacgtgcttgac 1173
|||||||||||||||| ||||||
Sbjct: 905 ctgttcttgagcacgtacttgac 883
Score = 274 bits (138), Expect = 2e-070
Identities = 261/302 (86%)
Strand = Plus / Minus
Query: 237 tcatgaccggcttcttcatctcccacgcggtgagacgggacaccttgacgtgcgccctcc 296
|||||||||||||||||||||||||||||||||| | |||||||||| | |||| |||
Sbjct: 1828 tcatgaccggcttcttcatctcccacgcggtgagctgcgacaccttgatctccgccttcc 1769
Query: 297 cgttgttgaacacgtagaggcgagcgtccttgccgatggccagcgacgggtagaccctgg 356
|||| ||||| ||||| ||||| |||| |||||||||||||||||||||||| ||||| |
Sbjct: 1768 cgttattgaaaacgtaaaggcgcgcgttcttgccgatggccagcgacgggtacaccctcg 1709
Query: 357 agaggatgcaggtcttgcccccggctccgaagctctcaacgaccgaccggtcgatcaggc 416
| |||||||| | ||| || || || |||||||||||||| ||||||| |||||||||||
Sbjct: 1708 acaggatgcacgcctttcctccagccccgaagctctcaacaaccgacctgtcgatcaggc 1649
Query: 417 ttctcagggatatcttgccgttcgagatgtccgtgtcgacaaatcctgcaaatgtcgggc 476
| ||||| |||||||| ||||| | |||||||||||| || || |||||||| |||||
Sbjct: 1648 tcctcagagatatcttcccgttggtgatgtccgtgtcaacgaaccctgcaaacgtcggct 1589
Query: 477 ggtacaggttcgggttcagggacgacttggtagggtcggtgcacatgagcaccacgggct 536
|||||| ||||||||| | || |||||||| |||||||||||||||||||| |||||||
Sbjct: 1588 ggtacatgttcgggttgcgcgatgacttggtggggtcggtgcacatgagcacgacgggct 1529
Query: 537 tg 538
||
Sbjct: 1528 tg 1527
Score = 99.6 bits (50), Expect = 6e-018
Identities = 122/146 (83%)
Strand = Plus / Minus
Query: 555 tgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccaca 614
||||||||||||||||||| ||||| |||||| | ||||| || ||||||||||
Sbjct: 1498 tgaacaccctgaagaacacggcggtcttctcctccagccccgcggacgcgagcacccaca 1439
Query: 615 gcccgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccg 674
| |||||||||||||||||||||||| |||| |||| | | ||| |||||||| || ||
Sbjct: 1438 ggccgaacggccccacgccgcccctcgcgtcggcgccccgcgcgctgcacagccgctgcg 1379
Query: 675 cgtcgtaggccagcgccgggtccagc 700
||||||| |||| |||||||||||||
Sbjct: 1378 cgtcgtacgccatcgccgggtccagc 1353
Score = 48.1 bits (24), Expect = 0.019
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1924 gtagacgacatgcgacgctcctgcgagctgcaacagcagcagca 1967
||||||||| ||||||||||| ||||||||| ||||||||||
Sbjct: 135 gtagacgacgtgcgacgctccggcgagctgctggagcagcagca 92
>ref|XM_472409.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1788
Score = 502 bits (253), Expect = e-139
Identities = 396/443 (89%), Gaps = 3/443 (0%)
Strand = Plus / Minus
Query: 734 tcgaagctcacctccacgtcagcctgtgccgtttgtatcccggtcacctcgacgtgatgt 793
||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |
Sbjct: 1271 tcgaagctcacctccacgtcagcctgtgcagtttgtagcccggtcacctcgacgtgttcc 1212
Query: 794 cctgccttgattaccctgttcctgagagtgaccg---actttgctctcagcgcctccacc 850
|||| ||||| ||||||| | ||||| |||||| |||| |||||||| ||| |||
Sbjct: 1211 cctggcttgaccaccctgtccttgagaatgaccggccacttccctctcagcctctcgacc 1152
Query: 851 tcctcgataggccactgcagcagctgcttcccactggggtccagccacaccgtccttgga 910
|||||||| |||||||||| ||| ||||||||||| |||||||||||||| |||| |||
Sbjct: 1151 tcctcgattggccactgcaacagttgcttcccacttgggtccagccacactttcctcgga 1092
Query: 911 atcgcctggattccagcccagcctttagccacatcgtcggcggcggtgtcggactcgtta 970
|||||||||||||| |||||||| || ||||| ||||||||||||||||||||||||||
Sbjct: 1091 atcgcctggattccggcccagcccttggccacgtcgtcggcggcggtgtcggactcgttg 1032
Query: 971 gcccagccccacaggatgcggcgccgcttggccgggtcgtagaacgtcttggacgcgtag 1030
||||| ||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 1031 gcccatccccagaggatgcggcggcgcttcgccgggtcgtagaacgtcttggaggcgtag 972
Query: 1031 aagttgccgtagtcgtagcgcaggcggtgctcgtcgccggcggggtcgtccggcacgtac 1090
|||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||
Sbjct: 971 aagttgccgtagtcgtagcggatgtggtgctcgtcgccggcggggtcgtccggcacgtac 912
Query: 1091 cgctcggccctcgggtggtacgtgcccacggtgtagtagtcgtaccgccggaggtcgagg 1150
||||||||| || ||| |||||| || |||||||||||||||||||| || |||||||||
Sbjct: 911 cgctcggccttccggtcgtacgttccgacggtgtagtagtcgtaccggcgcaggtcgagg 852
Query: 1151 ctgttcttgagcacgtgcttgac 1173
|||||||||||||||| ||||||
Sbjct: 851 ctgttcttgagcacgtacttgac 829
Score = 466 bits (235), Expect = e-128
Identities = 545/647 (84%), Gaps = 21/647 (3%)
Strand = Plus / Minus
Query: 1232 accgggtagaagtcagggcactcccacatccccgtgggcgccgagtgcagcggccgccgc 1291
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 758 accgggtagaagtccgggcactcccacatccccgtgggcgccgagtgcagcggctgcgcc 699
Query: 1292 acccgcctccaccgccggaagtcgcggctacggtacacgtacgccacgccgcggggcggc 1351
| ||| |||||||||||||||| | ||| ||||||||||||||||||||||||| | ||
Sbjct: 698 gcgcgcgtccaccgccggaagtccctgctccggtacacgtacgccacgccgcgggactgc 639
Query: 1352 gacgaccccgccgcgctgccgacgagcagccgccactgctcggggccggggccgcgccag 1411
||||| ||||||||||||||||||||| || || ||| ||||||||
Sbjct: 638 ------cccgcgaggctgccgacgagcagccgccagtggccgt---cggccccgcgccac 588
Query: 1412 gccgtggtcgggtcgcggaactgcgtcacgttgatgccgccctcggggacgatgacgggg 1471
|| |||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||
Sbjct: 587 gcggtggtcgggtcgcggaactgcgtcgcgttgatgccgccctcgggcacgatcaccggg 528
Query: 1472 ttgtgcgagggcttcacccactcccggagcagcgggtccgacacgttcttcgggtacgcc 1531
||||| ||||||||||||||| || ||||||||||||||| ||||| |||| ||||
Sbjct: 527 ttgtggccgggcttcacccactcgcgcagcagcgggtccgacccgttcctcggcagcgcc 468
Query: 1532 acgttccggacctggtagttgatgtccgggtggtccacgcccgtgtacatgatcaccggg 1591
|||||| | ||||||||||||| ||| ||| ||| ||||| |||||||||||||||||
Sbjct: 467 acgttctgcacctggtagttgacgtcggggcggttgacgccggtgtacatgatcaccgg- 409
Query: 1592 ccgccgccgtcgggcagcaccgtcgccgacccggaccagcagccgtacctgtcgcccggg 1651
|| | ||||||| || || |||||||||||| ||||||||||||||| ||||| || |
Sbjct: 408 -cgtc-ccgtcggccatcatcgtcgccgaccccgaccagcagccgtacttgtcggccctg 351
Query: 1652 atgcttggtctgagcgccggctctagcgccacccagttgatgaggtctcgcgacaccgag 1711
||||| || || ||||||| ||||||||||||||||||||||| || ||||| |||
Sbjct: 350 atgctgggctcgatggccggcttgagcgccacccagttgatgaggtcacgtgacactgag 291
Query: 1712 tgcgcccacacgatgttgccccatacggcgcccttgggattgtattggtagaagaaatgg 1771
||||||||||||||||| ||||| |||||||||||||| ||||| |||||||| | ||||
Sbjct: 290 tgcgcccacacgatgttcccccacacggcgcccttggggttgtactggtagaacagatgg 231
Query: 1772 taccaccccttgtagtacatgggcgcgttgggatcattgatccagttcttggggggctgg 1831
|||||||||||||||||||| |||| ||||||||||||||||||| ||||||
Sbjct: 230 taccaccccttgtagtacatcggcg---------cattgatccagttcttgggtggctgg 180
Query: 1832 aagtggtaccccgtcctgagcagggggttgacgatggacggcggcac 1878
||||| ||||| |||| |||| | || ||||||||||||||||||
Sbjct: 179 aagtgatacccagtccggagctcagagtcgacgatggacggcggcac 133
Score = 274 bits (138), Expect = 2e-070
Identities = 261/302 (86%)
Strand = Plus / Minus
Query: 237 tcatgaccggcttcttcatctcccacgcggtgagacgggacaccttgacgtgcgccctcc 296
|||||||||||||||||||||||||||||||||| | |||||||||| | |||| |||
Sbjct: 1774 tcatgaccggcttcttcatctcccacgcggtgagctgcgacaccttgatctccgccttcc 1715
Query: 297 cgttgttgaacacgtagaggcgagcgtccttgccgatggccagcgacgggtagaccctgg 356
|||| ||||| ||||| ||||| |||| |||||||||||||||||||||||| ||||| |
Sbjct: 1714 cgttattgaaaacgtaaaggcgcgcgttcttgccgatggccagcgacgggtacaccctcg 1655
Query: 357 agaggatgcaggtcttgcccccggctccgaagctctcaacgaccgaccggtcgatcaggc 416
| |||||||| | ||| || || || |||||||||||||| ||||||| |||||||||||
Sbjct: 1654 acaggatgcacgcctttcctccagccccgaagctctcaacaaccgacctgtcgatcaggc 1595
Query: 417 ttctcagggatatcttgccgttcgagatgtccgtgtcgacaaatcctgcaaatgtcgggc 476
| ||||| |||||||| ||||| | |||||||||||| || || |||||||| |||||
Sbjct: 1594 tcctcagagatatcttcccgttggtgatgtccgtgtcaacgaaccctgcaaacgtcggct 1535
Query: 477 ggtacaggttcgggttcagggacgacttggtagggtcggtgcacatgagcaccacgggct 536
|||||| ||||||||| | || |||||||| |||||||||||||||||||| |||||||
Sbjct: 1534 ggtacatgttcgggttgcgcgatgacttggtggggtcggtgcacatgagcacgacgggct 1475
Query: 537 tg 538
||
Sbjct: 1474 tg 1473
Score = 99.6 bits (50), Expect = 6e-018
Identities = 122/146 (83%)
Strand = Plus / Minus
Query: 555 tgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccaca 614
||||||||||||||||||| ||||| |||||| | ||||| || ||||||||||
Sbjct: 1444 tgaacaccctgaagaacacggcggtcttctcctccagccccgcggacgcgagcacccaca 1385
Query: 615 gcccgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccg 674
| |||||||||||||||||||||||| |||| |||| | | ||| |||||||| || ||
Sbjct: 1384 ggccgaacggccccacgccgcccctcgcgtcggcgccccgcgcgctgcacagccgctgcg 1325
Query: 675 cgtcgtaggccagcgccgggtccagc 700
||||||| |||| |||||||||||||
Sbjct: 1324 cgtcgtacgccatcgccgggtccagc 1299
Score = 48.1 bits (24), Expect = 0.019
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1924 gtagacgacatgcgacgctcctgcgagctgcaacagcagcagca 1967
||||||||| ||||||||||| ||||||||| ||||||||||
Sbjct: 90 gtagacgacgtgcgacgctccggcgagctgctggagcagcagca 47
>gb|AACV01009704.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009704, whole
genome shotgun sequence
Length = 16702
Score = 440 bits (222), Expect = e-120
Identities = 482/566 (85%), Gaps = 12/566 (2%)
Strand = Plus / Plus
Query: 1232 accgggtagaagtcagggcactcccacatccccgtgggcgccgagtgcagcggccgccgc 1291
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 14440 accgggtagaagtccgggcactcccacatccccgtgggcgccgagtgcagcggctgcgcc 14499
Query: 1292 acccgcctccaccgccggaagtcgcggctacggtacacgtacgccacgccgcggggcggc 1351
| ||| |||||||||||||||| | ||| ||||||||||||||||||||||||| | ||
Sbjct: 14500 gcgcgcgtccaccgccggaagtccctgctccggtacacgtacgccacgccgcgggactgc 14559
Query: 1352 gacgaccccgccgcgctgccgacgagcagccgccactgctcggggccggggccgcgccag 1411
||||| ||||||||||||||||||||| || || ||| ||||||||
Sbjct: 14560 ------cccgcgaggctgccgacgagcagccgccagtggccgt---cggccccgcgccac 14610
Query: 1412 gccgtggtcgggtcgcggaactgcgtcacgttgatgccgccctcggggacgatgacgggg 1471
|| |||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||
Sbjct: 14611 gcggtggtcgggtcgcggaactgcgtcgcgttgatgccgccctcgggcacgatcaccggg 14670
Query: 1472 ttgtgcgagggcttcacccactcccggagcagcgggtccgacacgttcttcgggtacgcc 1531
||||| ||||||||||||||| || ||||||||||||||| ||||| |||| ||||
Sbjct: 14671 ttgtggccgggcttcacccactcgcgcagcagcgggtccgacccgttcctcggcagcgcc 14730
Query: 1532 acgttccggacctggtagttgatgtccgggtggtccacgcccgtgtacatgatcaccggg 1591
|||||| | ||||||||||||| ||| ||| ||| ||||| |||||||||||||||||
Sbjct: 14731 acgttctgcacctggtagttgacgtcggggcggttgacgccggtgtacatgatcaccgg- 14789
Query: 1592 ccgccgccgtcgggcagcaccgtcgccgacccggaccagcagccgtacctgtcgcccggg 1651
|| | ||||||| || || |||||||||||| ||||||||||||||| ||||| || |
Sbjct: 14790 -cgtc-ccgtcggccatcatcgtcgccgaccccgaccagcagccgtacttgtcggccctg 14847
Query: 1652 atgcttggtctgagcgccggctctagcgccacccagttgatgaggtctcgcgacaccgag 1711
||||| || || ||||||| ||||||||||||||||||||||| || ||||| |||
Sbjct: 14848 atgctgggctcgatggccggcttgagcgccacccagttgatgaggtcacgtgacactgag 14907
Query: 1712 tgcgcccacacgatgttgccccatacggcgcccttgggattgtattggtagaagaaatgg 1771
||||||||||||||||| ||||| |||||||||||||| ||||| |||||||| | ||||
Sbjct: 14908 tgcgcccacacgatgttcccccacacggcgcccttggggttgtactggtagaacagatgg 14967
Query: 1772 taccaccccttgtagtacatgggcgc 1797
|||||||||||||||||||| |||||
Sbjct: 14968 taccaccccttgtagtacatcggcgc 14993
Score = 347 bits (175), Expect = 1e-092
Identities = 238/259 (91%)
Strand = Plus / Plus
Query: 915 cctggattccagcccagcctttagccacatcgtcggcggcggtgtcggactcgttagccc 974
|||||||||| |||||||| || ||||| |||||||||||||||||||||||||| ||||
Sbjct: 14111 cctggattccggcccagcccttggccacgtcgtcggcggcggtgtcggactcgttggccc 14170
Query: 975 agccccacaggatgcggcgccgcttggccgggtcgtagaacgtcttggacgcgtagaagt 1034
| ||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 14171 atccccagaggatgcggcggcgcttcgccgggtcgtagaacgtcttggaggcgtagaagt 14230
Query: 1035 tgccgtagtcgtagcgcaggcggtgctcgtcgccggcggggtcgtccggcacgtaccgct 1094
|||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 14231 tgccgtagtcgtagcggatgtggtgctcgtcgccggcggggtcgtccggcacgtaccgct 14290
Query: 1095 cggccctcgggtggtacgtgcccacggtgtagtagtcgtaccgccggaggtcgaggctgt 1154
||||| || ||| |||||| || |||||||||||||||||||| || |||||||||||||
Sbjct: 14291 cggccttccggtcgtacgttccgacggtgtagtagtcgtaccggcgcaggtcgaggctgt 14350
Query: 1155 tcttgagcacgtgcttgac 1173
|||||||||||| ||||||
Sbjct: 14351 tcttgagcacgtacttgac 14369
Score = 167 bits (84), Expect = 3e-038
Identities = 153/176 (86%)
Strand = Plus / Plus
Query: 237 tcatgaccggcttcttcatctcccacgcggtgagacgggacaccttgacgtgcgccctcc 296
|||||||||||||||||||||||||||||||||| | |||||||||| | |||| |||
Sbjct: 11890 tcatgaccggcttcttcatctcccacgcggtgagctgcgacaccttgatctccgccttcc 11949
Query: 297 cgttgttgaacacgtagaggcgagcgtccttgccgatggccagcgacgggtagaccctgg 356
|||| ||||| ||||| ||||| |||| |||||||||||||||||||||||| ||||| |
Sbjct: 11950 cgttattgaaaacgtaaaggcgcgcgttcttgccgatggccagcgacgggtacaccctcg 12009
Query: 357 agaggatgcaggtcttgcccccggctccgaagctctcaacgaccgaccggtcgatc 412
| |||||||| | ||| || || || |||||||||||||| ||||||| |||||||
Sbjct: 12010 acaggatgcacgcctttcctccagccccgaagctctcaacaaccgacctgtcgatc 12065
Score = 117 bits (59), Expect = 2e-023
Identities = 139/165 (84%), Gaps = 3/165 (1%)
Strand = Plus / Plus
Query: 756 cctgtgccgtttgtatcccggtcacctcgacgtgatgtcctgccttgattaccctgttcc 815
||||||| ||||||| |||||||||||||||||| | |||| ||||| ||||||| |
Sbjct: 13560 cctgtgcagtttgtagcccggtcacctcgacgtgttcccctggcttgaccaccctgtcct 13619
Query: 816 tgagagtgaccg---actttgctctcagcgcctccacctcctcgataggccactgcagca 872
||||| |||||| |||| |||||||| ||| ||||||||||| |||||||||| ||
Sbjct: 13620 tgagaatgaccggccacttccctctcagcctctcgacctcctcgattggccactgcaaca 13679
Query: 873 gctgcttcccactggggtccagccacaccgtccttggaatcgcct 917
| ||||||||||| |||||||||||||| |||| ||||||||||
Sbjct: 13680 gttgcttcccacttgggtccagccacactttcctcggaatcgcct 13724
Score = 99.6 bits (50), Expect = 6e-018
Identities = 122/146 (83%)
Strand = Plus / Plus
Query: 555 tgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccaca 614
||||||||||||||||||| ||||| |||||| | ||||| || ||||||||||
Sbjct: 12614 tgaacaccctgaagaacacggcggtcttctcctccagccccgcggacgcgagcacccaca 12673
Query: 615 gcccgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccg 674
| |||||||||||||||||||||||| |||| |||| | | ||| |||||||| || ||
Sbjct: 12674 ggccgaacggccccacgccgcccctcgcgtcggcgccccgcgcgctgcacagccgctgcg 12733
Query: 675 cgtcgtaggccagcgccgggtccagc 700
||||||| |||| |||||||||||||
Sbjct: 12734 cgtcgtacgccatcgccgggtccagc 12759
Score = 73.8 bits (37), Expect = 3e-010
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 1806 cattgatccagttcttggggggctggaagtggtaccccgtcctgagcagggggttgacga 1865
||||||||||||||||||| ||||||||||| ||||| |||| |||| | || |||||
Sbjct: 16132 cattgatccagttcttgggtggctggaagtgatacccagtccggagctcagagtcgacga 16191
Query: 1866 tggacggcggcac 1878
|||||||||||||
Sbjct: 16192 tggacggcggcac 16204
Score = 65.9 bits (33), Expect = 8e-008
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 412 caggcttctcagggatatcttgccgttcgagatgtccgtgtcgacaaatcctgcaaatgt 471
|||||| ||||| |||||||| ||||| | |||||||||||| || || |||||||| ||
Sbjct: 12351 caggctcctcagagatatcttcccgttggtgatgtccgtgtcaacgaaccctgcaaacgt 12410
Query: 472 cgggcggtacaggttcgggtt 492
||| |||||| |||||||||
Sbjct: 12411 cggctggtacatgttcgggtt 12431
Score = 60.0 bits (30), Expect = 5e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 501 acttggtagggtcggtgcacatgagcaccacgggcttg 538
||||||| |||||||||||||||||||| |||||||||
Sbjct: 12548 acttggtggggtcggtgcacatgagcacgacgggcttg 12585
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 734 tcgaagctcacctccacgtcagcctg 759
||||||||||||||||||||||||||
Sbjct: 12787 tcgaagctcacctccacgtcagcctg 12812
Score = 48.1 bits (24), Expect = 0.019
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 1924 gtagacgacatgcgacgctcctgcgagctgcaacagcagcagca 1967
||||||||| ||||||||||| ||||||||| ||||||||||
Sbjct: 16247 gtagacgacgtgcgacgctccggcgagctgctggagcagcagca 16290
>ref|NT_107198.1| Oryza sativa (japonica cultivar-group)
Length = 632744
Score = 440 bits (222), Expect = e-120
Identities = 482/566 (85%), Gaps = 12/566 (2%)
Strand = Plus / Minus
Query: 1232 accgggtagaagtcagggcactcccacatccccgtgggcgccgagtgcagcggccgccgc 1291
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 163744 accgggtagaagtccgggcactcccacatccccgtgggcgccgagtgcagcggctgcgcc 163685
Query: 1292 acccgcctccaccgccggaagtcgcggctacggtacacgtacgccacgccgcggggcggc 1351
| ||| |||||||||||||||| | ||| ||||||||||||||||||||||||| | ||
Sbjct: 163684 gcgcgcgtccaccgccggaagtccctgctccggtacacgtacgccacgccgcgggactgc 163625
Query: 1352 gacgaccccgccgcgctgccgacgagcagccgccactgctcggggccggggccgcgccag 1411
||||| ||||||||||||||||||||| || || ||| ||||||||
Sbjct: 163624 ------cccgcgaggctgccgacgagcagccgccagtggccgt---cggccccgcgccac 163574
Query: 1412 gccgtggtcgggtcgcggaactgcgtcacgttgatgccgccctcggggacgatgacgggg 1471
|| |||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||
Sbjct: 163573 gcggtggtcgggtcgcggaactgcgtcgcgttgatgccgccctcgggcacgatcaccggg 163514
Query: 1472 ttgtgcgagggcttcacccactcccggagcagcgggtccgacacgttcttcgggtacgcc 1531
||||| ||||||||||||||| || ||||||||||||||| ||||| |||| ||||
Sbjct: 163513 ttgtggccgggcttcacccactcgcgcagcagcgggtccgacccgttcctcggcagcgcc 163454
Query: 1532 acgttccggacctggtagttgatgtccgggtggtccacgcccgtgtacatgatcaccggg 1591
|||||| | ||||||||||||| ||| ||| ||| ||||| |||||||||||||||||
Sbjct: 163453 acgttctgcacctggtagttgacgtcggggcggttgacgccggtgtacatgatcaccgg- 163395
Query: 1592 ccgccgccgtcgggcagcaccgtcgccgacccggaccagcagccgtacctgtcgcccggg 1651
|| | ||||||| || || |||||||||||| ||||||||||||||| ||||| || |
Sbjct: 163394 -cgtc-ccgtcggccatcatcgtcgccgaccccgaccagcagccgtacttgtcggccctg 163337
Query: 1652 atgcttggtctgagcgccggctctagcgccacccagttgatgaggtctcgcgacaccgag 1711
||||| || || ||||||| ||||||||||||||||||||||| || ||||| |||
Sbjct: 163336 atgctgggctcgatggccggcttgagcgccacccagttgatgaggtcacgtgacactgag 163277
Query: 1712 tgcgcccacacgatgttgccccatacggcgcccttgggattgtattggtagaagaaatgg 1771
||||||||||||||||| ||||| |||||||||||||| ||||| |||||||| | ||||
Sbjct: 163276 tgcgcccacacgatgttcccccacacggcgcccttggggttgtactggtagaacagatgg 163217
Query: 1772 taccaccccttgtagtacatgggcgc 1797
|||||||||||||||||||| |||||
Sbjct: 163216 taccaccccttgtagtacatcggcgc 163191
Score = 347 bits (175), Expect = 1e-092
Identities = 238/259 (91%)
Strand = Plus / Minus
Query: 915 cctggattccagcccagcctttagccacatcgtcggcggcggtgtcggactcgttagccc 974
|||||||||| |||||||| || ||||| |||||||||||||||||||||||||| ||||
Sbjct: 164073 cctggattccggcccagcccttggccacgtcgtcggcggcggtgtcggactcgttggccc 164014
Query: 975 agccccacaggatgcggcgccgcttggccgggtcgtagaacgtcttggacgcgtagaagt 1034
| ||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 164013 atccccagaggatgcggcggcgcttcgccgggtcgtagaacgtcttggaggcgtagaagt 163954
Query: 1035 tgccgtagtcgtagcgcaggcggtgctcgtcgccggcggggtcgtccggcacgtaccgct 1094
|||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 163953 tgccgtagtcgtagcggatgtggtgctcgtcgccggcggggtcgtccggcacgtaccgct 163894
Query: 1095 cggccctcgggtggtacgtgcccacggtgtagtagtcgtaccgccggaggtcgaggctgt 1154
||||| || ||| |||||| || |||||||||||||||||||| || |||||||||||||
Sbjct: 163893 cggccttccggtcgtacgttccgacggtgtagtagtcgtaccggcgcaggtcgaggctgt 163834
Query: 1155 tcttgagcacgtgcttgac 1173
|||||||||||| ||||||
Sbjct: 163833 tcttgagcacgtacttgac 163815
Score = 167 bits (84), Expect = 3e-038
Identities = 153/176 (86%)
Strand = Plus / Minus
Query: 237 tcatgaccggcttcttcatctcccacgcggtgagacgggacaccttgacgtgcgccctcc 296
|||||||||||||||||||||||||||||||||| | |||||||||| | |||| |||
Sbjct: 166294 tcatgaccggcttcttcatctcccacgcggtgagctgcgacaccttgatctccgccttcc 166235
Query: 297 cgttgttgaacacgtagaggcgagcgtccttgccgatggccagcgacgggtagaccctgg 356
|||| ||||| ||||| ||||| |||| |||||||||||||||||||||||| ||||| |
Sbjct: 166234 cgttattgaaaacgtaaaggcgcgcgttcttgccgatggccagcgacgggtacaccctcg 166175
Query: 357 agaggatgcaggtcttgcccccggctccgaagctctcaacgaccgaccggtcgatc 412
| |||||||| | ||| || || || |||||||||||||| ||||||| |||||||
Sbjct: 166174 acaggatgcacgcctttcctccagccccgaagctctcaacaaccgacctgtcgatc 166119
Score = 139 bits (70), Expect = 7e-030
Identities = 94/102 (92%)
Strand = Plus / Minus
Query: 954 cggtgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtaga 1013
|||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||||
Sbjct: 153259 cggtgtcggactcgttggcccagccccagacgatgcggcggcgcttggccgggtcgtaga 153200
Query: 1014 acgtcttggacgcgtagaagttgccgtagtcgtagcgcaggc 1055
||| |||||| |||||||||| ||||||||||||||| ||||
Sbjct: 153199 acgacttggatgcgtagaagtcgccgtagtcgtagcggaggc 153158
Score = 117 bits (59), Expect = 2e-023
Identities = 139/165 (84%), Gaps = 3/165 (1%)
Strand = Plus / Minus
Query: 756 cctgtgccgtttgtatcccggtcacctcgacgtgatgtcctgccttgattaccctgttcc 815
||||||| ||||||| |||||||||||||||||| | |||| ||||| ||||||| |
Sbjct: 164624 cctgtgcagtttgtagcccggtcacctcgacgtgttcccctggcttgaccaccctgtcct 164565
Query: 816 tgagagtgaccg---actttgctctcagcgcctccacctcctcgataggccactgcagca 872
||||| |||||| |||| |||||||| ||| ||||||||||| |||||||||| ||
Sbjct: 164564 tgagaatgaccggccacttccctctcagcctctcgacctcctcgattggccactgcaaca 164505
Query: 873 gctgcttcccactggggtccagccacaccgtccttggaatcgcct 917
| ||||||||||| |||||||||||||| |||| ||||||||||
Sbjct: 164504 gttgcttcccacttgggtccagccacactttcctcggaatcgcct 164460
Score = 103 bits (52), Expect = 4e-019
Identities = 76/84 (90%)
Strand = Plus / Minus
Query: 553 cttgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcaccca 612
|||||||||||||||||| || || || ||||||||| ||| | ||||||||||| ||||
Sbjct: 153838 cttgaacaccctgaagaagacggccgtcctctccttgaggtcgccggaggccagcgccca 153779
Query: 613 cagcccgaacggccccacgccgcc 636
||||||||||||||||||||||||
Sbjct: 153778 cagcccgaacggccccacgccgcc 153755
Score = 99.6 bits (50), Expect = 6e-018
Identities = 122/146 (83%)
Strand = Plus / Minus
Query: 555 tgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccaca 614
||||||||||||||||||| ||||| |||||| | ||||| || ||||||||||
Sbjct: 165570 tgaacaccctgaagaacacggcggtcttctcctccagccccgcggacgcgagcacccaca 165511
Query: 615 gcccgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccg 674
| |||||||||||||||||||||||| |||| |||| | | ||| |||||||| || ||
Sbjct: 165510 ggccgaacggccccacgccgcccctcgcgtcggcgccccgcgcgctgcacagccgctgcg 165451
Query: 675 cgtcgtaggccagcgccgggtccagc 700
||||||| |||| |||||||||||||
Sbjct: 165450 cgtcgtacgccatcgccgggtccagc 165425
Score = 95.6 bits (48), Expect = 9e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 1668 ccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatgt 1727
||||||| |||||| ||||| ||| ||||| ||| ||||||||||||||| ||||||
Sbjct: 152542 ccggctccagcgccgtccagtcgatcaggtccgtcgaaaccgagtgcgcccactcgatgt 152483
Query: 1728 tgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtagt 1787
| ||||| |||||||||||||| ||||| |||||||| | ||||||| | ||||| ||||
Sbjct: 152482 tcccccacacggcgcccttggggttgtactggtagaacagatggtacaagcccttatagt 152423
Query: 1788 acat 1791
||||
Sbjct: 152422 acat 152419
Score = 73.8 bits (37), Expect = 3e-010
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 1806 cattgatccagttcttggggggctggaagtggtaccccgtcctgagcagggggttgacga 1865
||||||||||||||||||| ||||||||||| ||||| |||| |||| | || |||||
Sbjct: 162052 cattgatccagttcttgggtggctggaagtgatacccagtccggagctcagagtcgacga 161993
Query: 1866 tggacggcggcac 1878
|||||||||||||
Sbjct: 161992 tggacggcggcac 161980
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccgagtgcagcgg 1284
||||||| ||||||||||||||||| ||| ||||||||||||||||
Sbjct: 152950 agaagtccgggcactcccacatcccggtgtgcgccgagtgcagcgg 152905
Score = 65.9 bits (33), Expect = 8e-008
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 412 caggcttctcagggatatcttgccgttcgagatgtccgtgtcgacaaatcctgcaaatgt 471
|||||| ||||| |||||||| ||||| | |||||||||||| || || |||||||| ||
Sbjct: 165833 caggctcctcagagatatcttcccgttggtgatgtccgtgtcaacgaaccctgcaaacgt 165774
Query: 472 cgggcggtacaggttcgggtt 492
||| |||||| |||||||||
Sbjct: 165773 cggctggtacatgttcgggtt 165753
Score = 60.0 bits (30), Expect = 5e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 501 acttggtagggtcggtgcacatgagcaccacgggcttg 538
||||||| |||||||||||||||||||| |||||||||
Sbjct: 165636 acttggtggggtcggtgcacatgagcacgacgggcttg 165599
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 734 tcgaagctcacctccacgtcagcctg 759
||||||||||||||||||||||||||
Sbjct: 165397 tcgaagctcacctccacgtcagcctg 165372
Score = 50.1 bits (25), Expect = 0.005
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1118 acggtgtagtagtcgtaccgccggaggtcgaggctgttcttgagcacgtgcttgacc 1174
||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 153092 acggtgtagtactcgtaccgcgtcaggtcgaggctcaccttgagcacgtacttgacc 153036
Score = 50.1 bits (25), Expect = 0.005
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1808 ttgatccagttcttggggggctggaagtggtaccccgtcctgagc 1852
|||||||||| |||||| || |||||||||||||| |||| ||||
Sbjct: 152179 ttgatccagtgcttgggtggttggaagtggtacccggtccggagc 152135
Score = 48.1 bits (24), Expect = 0.019
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1924 gtagacgacatgcgacgctcctgcgagctgcaacagcagcagca 1967
||||||||| ||||||||||| ||||||||| ||||||||||
Sbjct: 161937 gtagacgacgtgcgacgctccggcgagctgctggagcagcagca 161894
>gb|CH401189.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000026 genomic
scaffold, whole genome shotgun sequence
Length = 11796637
Score = 440 bits (222), Expect = e-120
Identities = 482/566 (85%), Gaps = 12/566 (2%)
Strand = Plus / Minus
Query: 1232 accgggtagaagtcagggcactcccacatccccgtgggcgccgagtgcagcggccgccgc 1291
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 10215704 accgggtagaagtccgggcactcccacatccccgtgggcgccgagtgcagcggctgcgcc 10215645
Query: 1292 acccgcctccaccgccggaagtcgcggctacggtacacgtacgccacgccgcggggcggc 1351
| ||| |||||||||||||||| | ||| ||||||||||||||||||||||||| | ||
Sbjct: 10215644 gcgcgcgtccaccgccggaagtccctgctccggtacacgtacgccacgccgcgggactgc 10215585
Query: 1352 gacgaccccgccgcgctgccgacgagcagccgccactgctcggggccggggccgcgccag 1411
||||| ||||||||||||||||||||| || || ||| ||||||||
Sbjct: 10215584 ------cccgcgaggctgccgacgagcagccgccagtggccgt---cggccccgcgccac 10215534
Query: 1412 gccgtggtcgggtcgcggaactgcgtcacgttgatgccgccctcggggacgatgacgggg 1471
|| |||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||
Sbjct: 10215533 gcggtggtcgggtcgcggaactgcgtcgcgttgatgccgccctcgggcacgatcaccggg 10215474
Query: 1472 ttgtgcgagggcttcacccactcccggagcagcgggtccgacacgttcttcgggtacgcc 1531
||||| ||||||||||||||| || ||||||||||||||| ||||| |||| ||||
Sbjct: 10215473 ttgtggccgggcttcacccactcgcgcagcagcgggtccgacccgttcctcggcagcgcc 10215414
Query: 1532 acgttccggacctggtagttgatgtccgggtggtccacgcccgtgtacatgatcaccggg 1591
|||||| | ||||||||||||| ||| ||| ||| ||||| |||||||||||||||||
Sbjct: 10215413 acgttctgcacctggtagttgacgtcggggcggttgacgccggtgtacatgatcaccgg- 10215355
Query: 1592 ccgccgccgtcgggcagcaccgtcgccgacccggaccagcagccgtacctgtcgcccggg 1651
|| | ||||||| || || |||||||||||| ||||||||||||||| ||||| || |
Sbjct: 10215354 -cgtc-ccgtcggccatcatcgtcgccgaccccgaccagcagccgtacttgtcggccctg 10215297
Query: 1652 atgcttggtctgagcgccggctctagcgccacccagttgatgaggtctcgcgacaccgag 1711
||||| || || ||||||| ||||||||||||||||||||||| || ||||| |||
Sbjct: 10215296 atgctgggctcgatggccggcttgagcgccacccagttgatgaggtcacgtgacactgag 10215237
Query: 1712 tgcgcccacacgatgttgccccatacggcgcccttgggattgtattggtagaagaaatgg 1771
||||||||||||||||| ||||| |||||||||||||| ||||| |||||||| | ||||
Sbjct: 10215236 tgcgcccacacgatgttcccccacacggcgcccttggggttgtactggtagaacagatgg 10215177
Query: 1772 taccaccccttgtagtacatgggcgc 1797
|||||||||||||||||||| |||||
Sbjct: 10215176 taccaccccttgtagtacatcggcgc 10215151
Score = 347 bits (175), Expect = 1e-092
Identities = 238/259 (91%)
Strand = Plus / Minus
Query: 915 cctggattccagcccagcctttagccacatcgtcggcggcggtgtcggactcgttagccc 974
|||||||||| |||||||| || ||||| |||||||||||||||||||||||||| ||||
Sbjct: 10216033 cctggattccggcccagcccttggccacgtcgtcggcggcggtgtcggactcgttggccc 10215974
Query: 975 agccccacaggatgcggcgccgcttggccgggtcgtagaacgtcttggacgcgtagaagt 1034
| ||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 10215973 atccccagaggatgcggcggcgcttcgccgggtcgtagaacgtcttggaggcgtagaagt 10215914
Query: 1035 tgccgtagtcgtagcgcaggcggtgctcgtcgccggcggggtcgtccggcacgtaccgct 1094
|||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 10215913 tgccgtagtcgtagcggatgtggtgctcgtcgccggcggggtcgtccggcacgtaccgct 10215854
Query: 1095 cggccctcgggtggtacgtgcccacggtgtagtagtcgtaccgccggaggtcgaggctgt 1154
||||| || ||| |||||| || |||||||||||||||||||| || |||||||||||||
Sbjct: 10215853 cggccttccggtcgtacgttccgacggtgtagtagtcgtaccggcgcaggtcgaggctgt 10215794
Query: 1155 tcttgagcacgtgcttgac 1173
|||||||||||| ||||||
Sbjct: 10215793 tcttgagcacgtacttgac 10215775
Score = 167 bits (84), Expect = 3e-038
Identities = 153/176 (86%)
Strand = Plus / Minus
Query: 237 tcatgaccggcttcttcatctcccacgcggtgagacgggacaccttgacgtgcgccctcc 296
|||||||||||||||||||||||||||||||||| | |||||||||| | |||| |||
Sbjct: 10218254 tcatgaccggcttcttcatctcccacgcggtgagctgcgacaccttgatctccgccttcc 10218195
Query: 297 cgttgttgaacacgtagaggcgagcgtccttgccgatggccagcgacgggtagaccctgg 356
|||| ||||| ||||| ||||| |||| |||||||||||||||||||||||| ||||| |
Sbjct: 10218194 cgttattgaaaacgtaaaggcgcgcgttcttgccgatggccagcgacgggtacaccctcg 10218135
Query: 357 agaggatgcaggtcttgcccccggctccgaagctctcaacgaccgaccggtcgatc 412
| |||||||| | ||| || || || |||||||||||||| ||||||| |||||||
Sbjct: 10218134 acaggatgcacgcctttcctccagccccgaagctctcaacaaccgacctgtcgatc 10218079
Score = 139 bits (70), Expect = 7e-030
Identities = 94/102 (92%)
Strand = Plus / Minus
Query: 954 cggtgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtaga 1013
|||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||||
Sbjct: 10203589 cggtgtcggactcgttggcccagccccagacgatgcggcggcgcttggccgggtcgtaga 10203530
Query: 1014 acgtcttggacgcgtagaagttgccgtagtcgtagcgcaggc 1055
||| |||||| |||||||||| ||||||||||||||| ||||
Sbjct: 10203529 acgacttggatgcgtagaagtcgccgtagtcgtagcggaggc 10203488
Score = 117 bits (59), Expect = 2e-023
Identities = 139/165 (84%), Gaps = 3/165 (1%)
Strand = Plus / Minus
Query: 756 cctgtgccgtttgtatcccggtcacctcgacgtgatgtcctgccttgattaccctgttcc 815
||||||| ||||||| |||||||||||||||||| | |||| ||||| ||||||| |
Sbjct: 10216584 cctgtgcagtttgtagcccggtcacctcgacgtgttcccctggcttgaccaccctgtcct 10216525
Query: 816 tgagagtgaccg---actttgctctcagcgcctccacctcctcgataggccactgcagca 872
||||| |||||| |||| |||||||| ||| ||||||||||| |||||||||| ||
Sbjct: 10216524 tgagaatgaccggccacttccctctcagcctctcgacctcctcgattggccactgcaaca 10216465
Query: 873 gctgcttcccactggggtccagccacaccgtccttggaatcgcct 917
| ||||||||||| |||||||||||||| |||| ||||||||||
Sbjct: 10216464 gttgcttcccacttgggtccagccacactttcctcggaatcgcct 10216420
Score = 103 bits (52), Expect = 4e-019
Identities = 76/84 (90%)
Strand = Plus / Minus
Query: 553 cttgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcaccca 612
|||||||||||||||||| || || || ||||||||| ||| | ||||||||||| ||||
Sbjct: 10204168 cttgaacaccctgaagaagacggccgtcctctccttgaggtcgccggaggccagcgccca 10204109
Query: 613 cagcccgaacggccccacgccgcc 636
||||||||||||||||||||||||
Sbjct: 10204108 cagcccgaacggccccacgccgcc 10204085
Score = 99.6 bits (50), Expect = 6e-018
Identities = 122/146 (83%)
Strand = Plus / Minus
Query: 555 tgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccaca 614
||||||||||||||||||| ||||| |||||| | ||||| || ||||||||||
Sbjct: 10217530 tgaacaccctgaagaacacggcggtcttctcctccagccccgcggacgcgagcacccaca 10217471
Query: 615 gcccgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccg 674
| |||||||||||||||||||||||| |||| |||| | | ||| |||||||| || ||
Sbjct: 10217470 ggccgaacggccccacgccgcccctcgcgtcggcgccccgcgcgctgcacagccgctgcg 10217411
Query: 675 cgtcgtaggccagcgccgggtccagc 700
||||||| |||| |||||||||||||
Sbjct: 10217410 cgtcgtacgccatcgccgggtccagc 10217385
Score = 95.6 bits (48), Expect = 9e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 1668 ccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatgt 1727
||||||| |||||| ||||| ||| ||||| ||| ||||||||||||||| ||||||
Sbjct: 10202872 ccggctccagcgccgtccagtcgatcaggtccgtcgaaaccgagtgcgcccactcgatgt 10202813
Query: 1728 tgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtagt 1787
| ||||| |||||||||||||| ||||| |||||||| | ||||||| | ||||| ||||
Sbjct: 10202812 tcccccacacggcgcccttggggttgtactggtagaacagatggtacaagcccttatagt 10202753
Query: 1788 acat 1791
||||
Sbjct: 10202752 acat 10202749
Score = 73.8 bits (37), Expect = 3e-010
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 1806 cattgatccagttcttggggggctggaagtggtaccccgtcctgagcagggggttgacga 1865
||||||||||||||||||| ||||||||||| ||||| |||| |||| | || |||||
Sbjct: 10214012 cattgatccagttcttgggtggctggaagtgatacccagtccggagctcagagtcgacga 10213953
Query: 1866 tggacggcggcac 1878
|||||||||||||
Sbjct: 10213952 tggacggcggcac 10213940
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccgagtgcagcgg 1284
||||||| ||||||||||||||||| ||| ||||||||||||||||
Sbjct: 10203280 agaagtccgggcactcccacatcccggtgtgcgccgagtgcagcgg 10203235
Score = 65.9 bits (33), Expect = 8e-008
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 412 caggcttctcagggatatcttgccgttcgagatgtccgtgtcgacaaatcctgcaaatgt 471
|||||| ||||| |||||||| ||||| | |||||||||||| || || |||||||| ||
Sbjct: 10217793 caggctcctcagagatatcttcccgttggtgatgtccgtgtcaacgaaccctgcaaacgt 10217734
Query: 472 cgggcggtacaggttcgggtt 492
||| |||||| |||||||||
Sbjct: 10217733 cggctggtacatgttcgggtt 10217713
Score = 60.0 bits (30), Expect = 5e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 501 acttggtagggtcggtgcacatgagcaccacgggcttg 538
||||||| |||||||||||||||||||| |||||||||
Sbjct: 10217596 acttggtggggtcggtgcacatgagcacgacgggcttg 10217559
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 734 tcgaagctcacctccacgtcagcctg 759
||||||||||||||||||||||||||
Sbjct: 10217357 tcgaagctcacctccacgtcagcctg 10217332
Score = 50.1 bits (25), Expect = 0.005
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1118 acggtgtagtagtcgtaccgccggaggtcgaggctgttcttgagcacgtgcttgacc 1174
||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 10203422 acggtgtagtactcgtaccgcgtcaggtcgaggctcaccttgagcacgtacttgacc 10203366
Score = 50.1 bits (25), Expect = 0.005
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1808 ttgatccagttcttggggggctggaagtggtaccccgtcctgagc 1852
|||||||||| |||||| || |||||||||||||| |||| ||||
Sbjct: 10202509 ttgatccagtgcttgggtggttggaagtggtacccggtccggagc 10202465
Score = 48.1 bits (24), Expect = 0.019
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1924 gtagacgacatgcgacgctcctgcgagctgcaacagcagcagca 1967
||||||||| ||||||||||| ||||||||| ||||||||||
Sbjct: 10213897 gtagacgacgtgcgacgctccggcgagctgctggagcagcagca 10213854
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 440 bits (222), Expect = e-120
Identities = 482/566 (85%), Gaps = 12/566 (2%)
Strand = Plus / Minus
Query: 1232 accgggtagaagtcagggcactcccacatccccgtgggcgccgagtgcagcggccgccgc 1291
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 17563066 accgggtagaagtccgggcactcccacatccccgtgggcgccgagtgcagcggctgcgcc 17563007
Query: 1292 acccgcctccaccgccggaagtcgcggctacggtacacgtacgccacgccgcggggcggc 1351
| ||| |||||||||||||||| | ||| ||||||||||||||||||||||||| | ||
Sbjct: 17563006 gcgcgcgtccaccgccggaagtccctgctccggtacacgtacgccacgccgcgggactgc 17562947
Query: 1352 gacgaccccgccgcgctgccgacgagcagccgccactgctcggggccggggccgcgccag 1411
||||| ||||||||||||||||||||| || || ||| ||||||||
Sbjct: 17562946 ------cccgcgaggctgccgacgagcagccgccagtggccgt---cggccccgcgccac 17562896
Query: 1412 gccgtggtcgggtcgcggaactgcgtcacgttgatgccgccctcggggacgatgacgggg 1471
|| |||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||
Sbjct: 17562895 gcggtggtcgggtcgcggaactgcgtcgcgttgatgccgccctcgggcacgatcaccggg 17562836
Query: 1472 ttgtgcgagggcttcacccactcccggagcagcgggtccgacacgttcttcgggtacgcc 1531
||||| ||||||||||||||| || ||||||||||||||| ||||| |||| ||||
Sbjct: 17562835 ttgtggccgggcttcacccactcgcgcagcagcgggtccgacccgttcctcggcagcgcc 17562776
Query: 1532 acgttccggacctggtagttgatgtccgggtggtccacgcccgtgtacatgatcaccggg 1591
|||||| | ||||||||||||| ||| ||| ||| ||||| |||||||||||||||||
Sbjct: 17562775 acgttctgcacctggtagttgacgtcggggcggttgacgccggtgtacatgatcaccgg- 17562717
Query: 1592 ccgccgccgtcgggcagcaccgtcgccgacccggaccagcagccgtacctgtcgcccggg 1651
|| | ||||||| || || |||||||||||| ||||||||||||||| ||||| || |
Sbjct: 17562716 -cgtc-ccgtcggccatcatcgtcgccgaccccgaccagcagccgtacttgtcggccctg 17562659
Query: 1652 atgcttggtctgagcgccggctctagcgccacccagttgatgaggtctcgcgacaccgag 1711
||||| || || ||||||| ||||||||||||||||||||||| || ||||| |||
Sbjct: 17562658 atgctgggctcgatggccggcttgagcgccacccagttgatgaggtcacgtgacactgag 17562599
Query: 1712 tgcgcccacacgatgttgccccatacggcgcccttgggattgtattggtagaagaaatgg 1771
||||||||||||||||| ||||| |||||||||||||| ||||| |||||||| | ||||
Sbjct: 17562598 tgcgcccacacgatgttcccccacacggcgcccttggggttgtactggtagaacagatgg 17562539
Query: 1772 taccaccccttgtagtacatgggcgc 1797
|||||||||||||||||||| |||||
Sbjct: 17562538 taccaccccttgtagtacatcggcgc 17562513
Score = 347 bits (175), Expect = 1e-092
Identities = 238/259 (91%)
Strand = Plus / Minus
Query: 915 cctggattccagcccagcctttagccacatcgtcggcggcggtgtcggactcgttagccc 974
|||||||||| |||||||| || ||||| |||||||||||||||||||||||||| ||||
Sbjct: 17563395 cctggattccggcccagcccttggccacgtcgtcggcggcggtgtcggactcgttggccc 17563336
Query: 975 agccccacaggatgcggcgccgcttggccgggtcgtagaacgtcttggacgcgtagaagt 1034
| ||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 17563335 atccccagaggatgcggcggcgcttcgccgggtcgtagaacgtcttggaggcgtagaagt 17563276
Query: 1035 tgccgtagtcgtagcgcaggcggtgctcgtcgccggcggggtcgtccggcacgtaccgct 1094
|||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 17563275 tgccgtagtcgtagcggatgtggtgctcgtcgccggcggggtcgtccggcacgtaccgct 17563216
Query: 1095 cggccctcgggtggtacgtgcccacggtgtagtagtcgtaccgccggaggtcgaggctgt 1154
||||| || ||| |||||| || |||||||||||||||||||| || |||||||||||||
Sbjct: 17563215 cggccttccggtcgtacgttccgacggtgtagtagtcgtaccggcgcaggtcgaggctgt 17563156
Query: 1155 tcttgagcacgtgcttgac 1173
|||||||||||| ||||||
Sbjct: 17563155 tcttgagcacgtacttgac 17563137
Score = 167 bits (84), Expect = 3e-038
Identities = 153/176 (86%)
Strand = Plus / Minus
Query: 237 tcatgaccggcttcttcatctcccacgcggtgagacgggacaccttgacgtgcgccctcc 296
|||||||||||||||||||||||||||||||||| | |||||||||| | |||| |||
Sbjct: 17565616 tcatgaccggcttcttcatctcccacgcggtgagctgcgacaccttgatctccgccttcc 17565557
Query: 297 cgttgttgaacacgtagaggcgagcgtccttgccgatggccagcgacgggtagaccctgg 356
|||| ||||| ||||| ||||| |||| |||||||||||||||||||||||| ||||| |
Sbjct: 17565556 cgttattgaaaacgtaaaggcgcgcgttcttgccgatggccagcgacgggtacaccctcg 17565497
Query: 357 agaggatgcaggtcttgcccccggctccgaagctctcaacgaccgaccggtcgatc 412
| |||||||| | ||| || || || |||||||||||||| ||||||| |||||||
Sbjct: 17565496 acaggatgcacgcctttcctccagccccgaagctctcaacaaccgacctgtcgatc 17565441
Score = 139 bits (70), Expect = 7e-030
Identities = 94/102 (92%)
Strand = Plus / Minus
Query: 954 cggtgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtaga 1013
|||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||||
Sbjct: 17550951 cggtgtcggactcgttggcccagccccagacgatgcggcggcgcttggccgggtcgtaga 17550892
Query: 1014 acgtcttggacgcgtagaagttgccgtagtcgtagcgcaggc 1055
||| |||||| |||||||||| ||||||||||||||| ||||
Sbjct: 17550891 acgacttggatgcgtagaagtcgccgtagtcgtagcggaggc 17550850
Score = 117 bits (59), Expect = 2e-023
Identities = 139/165 (84%), Gaps = 3/165 (1%)
Strand = Plus / Minus
Query: 756 cctgtgccgtttgtatcccggtcacctcgacgtgatgtcctgccttgattaccctgttcc 815
||||||| ||||||| |||||||||||||||||| | |||| ||||| ||||||| |
Sbjct: 17563946 cctgtgcagtttgtagcccggtcacctcgacgtgttcccctggcttgaccaccctgtcct 17563887
Query: 816 tgagagtgaccg---actttgctctcagcgcctccacctcctcgataggccactgcagca 872
||||| |||||| |||| |||||||| ||| ||||||||||| |||||||||| ||
Sbjct: 17563886 tgagaatgaccggccacttccctctcagcctctcgacctcctcgattggccactgcaaca 17563827
Query: 873 gctgcttcccactggggtccagccacaccgtccttggaatcgcct 917
| ||||||||||| |||||||||||||| |||| ||||||||||
Sbjct: 17563826 gttgcttcccacttgggtccagccacactttcctcggaatcgcct 17563782
Score = 103 bits (52), Expect = 4e-019
Identities = 76/84 (90%)
Strand = Plus / Minus
Query: 553 cttgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcaccca 612
|||||||||||||||||| || || || ||||||||| ||| | ||||||||||| ||||
Sbjct: 17551530 cttgaacaccctgaagaagacggccgtcctctccttgaggtcgccggaggccagcgccca 17551471
Query: 613 cagcccgaacggccccacgccgcc 636
||||||||||||||||||||||||
Sbjct: 17551470 cagcccgaacggccccacgccgcc 17551447
Score = 99.6 bits (50), Expect = 6e-018
Identities = 122/146 (83%)
Strand = Plus / Minus
Query: 555 tgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccaca 614
||||||||||||||||||| ||||| |||||| | ||||| || ||||||||||
Sbjct: 17564892 tgaacaccctgaagaacacggcggtcttctcctccagccccgcggacgcgagcacccaca 17564833
Query: 615 gcccgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccg 674
| |||||||||||||||||||||||| |||| |||| | | ||| |||||||| || ||
Sbjct: 17564832 ggccgaacggccccacgccgcccctcgcgtcggcgccccgcgcgctgcacagccgctgcg 17564773
Query: 675 cgtcgtaggccagcgccgggtccagc 700
||||||| |||| |||||||||||||
Sbjct: 17564772 cgtcgtacgccatcgccgggtccagc 17564747
Score = 95.6 bits (48), Expect = 9e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 1668 ccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatgt 1727
||||||| |||||| ||||| ||| ||||| ||| ||||||||||||||| ||||||
Sbjct: 17550234 ccggctccagcgccgtccagtcgatcaggtccgtcgaaaccgagtgcgcccactcgatgt 17550175
Query: 1728 tgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtagt 1787
| ||||| |||||||||||||| ||||| |||||||| | ||||||| | ||||| ||||
Sbjct: 17550174 tcccccacacggcgcccttggggttgtactggtagaacagatggtacaagcccttatagt 17550115
Query: 1788 acat 1791
||||
Sbjct: 17550114 acat 17550111
Score = 79.8 bits (40), Expect = 5e-012
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 1004 gggtcgtagaacgtcttggacgcgtagaagttgccgtagtcgta 1047
||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 23717349 gggtcgtagaacgtcttggacgcgtagaacttgccgtagtcgta 23717306
Score = 73.8 bits (37), Expect = 3e-010
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 1806 cattgatccagttcttggggggctggaagtggtaccccgtcctgagcagggggttgacga 1865
||||||||||||||||||| ||||||||||| ||||| |||| |||| | || |||||
Sbjct: 17561374 cattgatccagttcttgggtggctggaagtgatacccagtccggagctcagagtcgacga 17561315
Query: 1866 tggacggcggcac 1878
|||||||||||||
Sbjct: 17561314 tggacggcggcac 17561302
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccgagtgcagcgg 1284
||||||| ||||||||||||||||| ||| ||||||||||||||||
Sbjct: 17550642 agaagtccgggcactcccacatcccggtgtgcgccgagtgcagcgg 17550597
Score = 65.9 bits (33), Expect = 8e-008
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 412 caggcttctcagggatatcttgccgttcgagatgtccgtgtcgacaaatcctgcaaatgt 471
|||||| ||||| |||||||| ||||| | |||||||||||| || || |||||||| ||
Sbjct: 17565155 caggctcctcagagatatcttcccgttggtgatgtccgtgtcaacgaaccctgcaaacgt 17565096
Query: 472 cgggcggtacaggttcgggtt 492
||| |||||| |||||||||
Sbjct: 17565095 cggctggtacatgttcgggtt 17565075
Score = 60.0 bits (30), Expect = 5e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 501 acttggtagggtcggtgcacatgagcaccacgggcttg 538
||||||| |||||||||||||||||||| |||||||||
Sbjct: 17564958 acttggtggggtcggtgcacatgagcacgacgggcttg 17564921
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 734 tcgaagctcacctccacgtcagcctg 759
||||||||||||||||||||||||||
Sbjct: 17564719 tcgaagctcacctccacgtcagcctg 17564694
Score = 50.1 bits (25), Expect = 0.005
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1118 acggtgtagtagtcgtaccgccggaggtcgaggctgttcttgagcacgtgcttgacc 1174
||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 17550784 acggtgtagtactcgtaccgcgtcaggtcgaggctcaccttgagcacgtacttgacc 17550728
Score = 50.1 bits (25), Expect = 0.005
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1808 ttgatccagttcttggggggctggaagtggtaccccgtcctgagc 1852
|||||||||| |||||| || |||||||||||||| |||| ||||
Sbjct: 17549871 ttgatccagtgcttgggtggttggaagtggtacccggtccggagc 17549827
Score = 48.1 bits (24), Expect = 0.019
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 1755 attggtagaagaaatggtaccaccccttgtagtaca 1790
|||||||||| | ||||||||| |||||||||||||
Sbjct: 23716607 attggtagaacagatggtaccatcccttgtagtaca 23716572
Score = 48.1 bits (24), Expect = 0.019
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1924 gtagacgacatgcgacgctcctgcgagctgcaacagcagcagca 1967
||||||||| ||||||||||| ||||||||| ||||||||||
Sbjct: 17561259 gtagacgacgtgcgacgctccggcgagctgctggagcagcagca 17561216
>emb|AL662945.3|OSJN00141 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000126_13,
complete sequence
Length = 113960
Score = 440 bits (222), Expect = e-120
Identities = 482/566 (85%), Gaps = 12/566 (2%)
Strand = Plus / Minus
Query: 1232 accgggtagaagtcagggcactcccacatccccgtgggcgccgagtgcagcggccgccgc 1291
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 46531 accgggtagaagtccgggcactcccacatccccgtgggcgccgagtgcagcggctgcgcc 46472
Query: 1292 acccgcctccaccgccggaagtcgcggctacggtacacgtacgccacgccgcggggcggc 1351
| ||| |||||||||||||||| | ||| ||||||||||||||||||||||||| | ||
Sbjct: 46471 gcgcgcgtccaccgccggaagtccctgctccggtacacgtacgccacgccgcgggactgc 46412
Query: 1352 gacgaccccgccgcgctgccgacgagcagccgccactgctcggggccggggccgcgccag 1411
||||| ||||||||||||||||||||| || || ||| ||||||||
Sbjct: 46411 ------cccgcgaggctgccgacgagcagccgccagtggccgt---cggccccgcgccac 46361
Query: 1412 gccgtggtcgggtcgcggaactgcgtcacgttgatgccgccctcggggacgatgacgggg 1471
|| |||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||
Sbjct: 46360 gcggtggtcgggtcgcggaactgcgtcgcgttgatgccgccctcgggcacgatcaccggg 46301
Query: 1472 ttgtgcgagggcttcacccactcccggagcagcgggtccgacacgttcttcgggtacgcc 1531
||||| ||||||||||||||| || ||||||||||||||| ||||| |||| ||||
Sbjct: 46300 ttgtggccgggcttcacccactcgcgcagcagcgggtccgacccgttcctcggcagcgcc 46241
Query: 1532 acgttccggacctggtagttgatgtccgggtggtccacgcccgtgtacatgatcaccggg 1591
|||||| | ||||||||||||| ||| ||| ||| ||||| |||||||||||||||||
Sbjct: 46240 acgttctgcacctggtagttgacgtcggggcggttgacgccggtgtacatgatcaccgg- 46182
Query: 1592 ccgccgccgtcgggcagcaccgtcgccgacccggaccagcagccgtacctgtcgcccggg 1651
|| | ||||||| || || |||||||||||| ||||||||||||||| ||||| || |
Sbjct: 46181 -cgtc-ccgtcggccatcatcgtcgccgaccccgaccagcagccgtacttgtcggccctg 46124
Query: 1652 atgcttggtctgagcgccggctctagcgccacccagttgatgaggtctcgcgacaccgag 1711
||||| || || ||||||| ||||||||||||||||||||||| || ||||| |||
Sbjct: 46123 atgctgggctcgatggccggcttgagcgccacccagttgatgaggtcacgtgacactgag 46064
Query: 1712 tgcgcccacacgatgttgccccatacggcgcccttgggattgtattggtagaagaaatgg 1771
||||||||||||||||| ||||| |||||||||||||| ||||| |||||||| | ||||
Sbjct: 46063 tgcgcccacacgatgttcccccacacggcgcccttggggttgtactggtagaacagatgg 46004
Query: 1772 taccaccccttgtagtacatgggcgc 1797
|||||||||||||||||||| |||||
Sbjct: 46003 taccaccccttgtagtacatcggcgc 45978
Score = 347 bits (175), Expect = 1e-092
Identities = 238/259 (91%)
Strand = Plus / Minus
Query: 915 cctggattccagcccagcctttagccacatcgtcggcggcggtgtcggactcgttagccc 974
|||||||||| |||||||| || ||||| |||||||||||||||||||||||||| ||||
Sbjct: 46860 cctggattccggcccagcccttggccacgtcgtcggcggcggtgtcggactcgttggccc 46801
Query: 975 agccccacaggatgcggcgccgcttggccgggtcgtagaacgtcttggacgcgtagaagt 1034
| ||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 46800 atccccagaggatgcggcggcgcttcgccgggtcgtagaacgtcttggaggcgtagaagt 46741
Query: 1035 tgccgtagtcgtagcgcaggcggtgctcgtcgccggcggggtcgtccggcacgtaccgct 1094
|||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 46740 tgccgtagtcgtagcggatgtggtgctcgtcgccggcggggtcgtccggcacgtaccgct 46681
Query: 1095 cggccctcgggtggtacgtgcccacggtgtagtagtcgtaccgccggaggtcgaggctgt 1154
||||| || ||| |||||| || |||||||||||||||||||| || |||||||||||||
Sbjct: 46680 cggccttccggtcgtacgttccgacggtgtagtagtcgtaccggcgcaggtcgaggctgt 46621
Query: 1155 tcttgagcacgtgcttgac 1173
|||||||||||| ||||||
Sbjct: 46620 tcttgagcacgtacttgac 46602
Score = 167 bits (84), Expect = 3e-038
Identities = 153/176 (86%)
Strand = Plus / Minus
Query: 237 tcatgaccggcttcttcatctcccacgcggtgagacgggacaccttgacgtgcgccctcc 296
|||||||||||||||||||||||||||||||||| | |||||||||| | |||| |||
Sbjct: 49081 tcatgaccggcttcttcatctcccacgcggtgagctgcgacaccttgatctccgccttcc 49022
Query: 297 cgttgttgaacacgtagaggcgagcgtccttgccgatggccagcgacgggtagaccctgg 356
|||| ||||| ||||| ||||| |||| |||||||||||||||||||||||| ||||| |
Sbjct: 49021 cgttattgaaaacgtaaaggcgcgcgttcttgccgatggccagcgacgggtacaccctcg 48962
Query: 357 agaggatgcaggtcttgcccccggctccgaagctctcaacgaccgaccggtcgatc 412
| |||||||| | ||| || || || |||||||||||||| ||||||| |||||||
Sbjct: 48961 acaggatgcacgcctttcctccagccccgaagctctcaacaaccgacctgtcgatc 48906
Score = 139 bits (70), Expect = 7e-030
Identities = 94/102 (92%)
Strand = Plus / Minus
Query: 954 cggtgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtaga 1013
|||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||||
Sbjct: 36046 cggtgtcggactcgttggcccagccccagacgatgcggcggcgcttggccgggtcgtaga 35987
Query: 1014 acgtcttggacgcgtagaagttgccgtagtcgtagcgcaggc 1055
||| |||||| |||||||||| ||||||||||||||| ||||
Sbjct: 35986 acgacttggatgcgtagaagtcgccgtagtcgtagcggaggc 35945
Score = 117 bits (59), Expect = 2e-023
Identities = 139/165 (84%), Gaps = 3/165 (1%)
Strand = Plus / Minus
Query: 756 cctgtgccgtttgtatcccggtcacctcgacgtgatgtcctgccttgattaccctgttcc 815
||||||| ||||||| |||||||||||||||||| | |||| ||||| ||||||| |
Sbjct: 47411 cctgtgcagtttgtagcccggtcacctcgacgtgttcccctggcttgaccaccctgtcct 47352
Query: 816 tgagagtgaccg---actttgctctcagcgcctccacctcctcgataggccactgcagca 872
||||| |||||| |||| |||||||| ||| ||||||||||| |||||||||| ||
Sbjct: 47351 tgagaatgaccggccacttccctctcagcctctcgacctcctcgattggccactgcaaca 47292
Query: 873 gctgcttcccactggggtccagccacaccgtccttggaatcgcct 917
| ||||||||||| |||||||||||||| |||| ||||||||||
Sbjct: 47291 gttgcttcccacttgggtccagccacactttcctcggaatcgcct 47247
Score = 103 bits (52), Expect = 4e-019
Identities = 76/84 (90%)
Strand = Plus / Minus
Query: 553 cttgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcaccca 612
|||||||||||||||||| || || || ||||||||| ||| | ||||||||||| ||||
Sbjct: 36625 cttgaacaccctgaagaagacggccgtcctctccttgaggtcgccggaggccagcgccca 36566
Query: 613 cagcccgaacggccccacgccgcc 636
||||||||||||||||||||||||
Sbjct: 36565 cagcccgaacggccccacgccgcc 36542
Score = 99.6 bits (50), Expect = 6e-018
Identities = 122/146 (83%)
Strand = Plus / Minus
Query: 555 tgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccaca 614
||||||||||||||||||| ||||| |||||| | ||||| || ||||||||||
Sbjct: 48357 tgaacaccctgaagaacacggcggtcttctcctccagccccgcggacgcgagcacccaca 48298
Query: 615 gcccgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccg 674
| |||||||||||||||||||||||| |||| |||| | | ||| |||||||| || ||
Sbjct: 48297 ggccgaacggccccacgccgcccctcgcgtcggcgccccgcgcgctgcacagccgctgcg 48238
Query: 675 cgtcgtaggccagcgccgggtccagc 700
||||||| |||| |||||||||||||
Sbjct: 48237 cgtcgtacgccatcgccgggtccagc 48212
Score = 95.6 bits (48), Expect = 9e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 1668 ccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatgt 1727
||||||| |||||| ||||| ||| ||||| ||| ||||||||||||||| ||||||
Sbjct: 35329 ccggctccagcgccgtccagtcgatcaggtccgtcgaaaccgagtgcgcccactcgatgt 35270
Query: 1728 tgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtagt 1787
| ||||| |||||||||||||| ||||| |||||||| | ||||||| | ||||| ||||
Sbjct: 35269 tcccccacacggcgcccttggggttgtactggtagaacagatggtacaagcccttatagt 35210
Query: 1788 acat 1791
||||
Sbjct: 35209 acat 35206
Score = 73.8 bits (37), Expect = 3e-010
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 1806 cattgatccagttcttggggggctggaagtggtaccccgtcctgagcagggggttgacga 1865
||||||||||||||||||| ||||||||||| ||||| |||| |||| | || |||||
Sbjct: 44839 cattgatccagttcttgggtggctggaagtgatacccagtccggagctcagagtcgacga 44780
Query: 1866 tggacggcggcac 1878
|||||||||||||
Sbjct: 44779 tggacggcggcac 44767
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccgagtgcagcgg 1284
||||||| ||||||||||||||||| ||| ||||||||||||||||
Sbjct: 35737 agaagtccgggcactcccacatcccggtgtgcgccgagtgcagcgg 35692
Score = 65.9 bits (33), Expect = 8e-008
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 412 caggcttctcagggatatcttgccgttcgagatgtccgtgtcgacaaatcctgcaaatgt 471
|||||| ||||| |||||||| ||||| | |||||||||||| || || |||||||| ||
Sbjct: 48620 caggctcctcagagatatcttcccgttggtgatgtccgtgtcaacgaaccctgcaaacgt 48561
Query: 472 cgggcggtacaggttcgggtt 492
||| |||||| |||||||||
Sbjct: 48560 cggctggtacatgttcgggtt 48540
Score = 60.0 bits (30), Expect = 5e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 501 acttggtagggtcggtgcacatgagcaccacgggcttg 538
||||||| |||||||||||||||||||| |||||||||
Sbjct: 48423 acttggtggggtcggtgcacatgagcacgacgggcttg 48386
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 734 tcgaagctcacctccacgtcagcctg 759
||||||||||||||||||||||||||
Sbjct: 48184 tcgaagctcacctccacgtcagcctg 48159
Score = 50.1 bits (25), Expect = 0.005
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1118 acggtgtagtagtcgtaccgccggaggtcgaggctgttcttgagcacgtgcttgacc 1174
||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 35879 acggtgtagtactcgtaccgcgtcaggtcgaggctcaccttgagcacgtacttgacc 35823
Score = 50.1 bits (25), Expect = 0.005
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1808 ttgatccagttcttggggggctggaagtggtaccccgtcctgagc 1852
|||||||||| |||||| || |||||||||||||| |||| ||||
Sbjct: 34966 ttgatccagtgcttgggtggttggaagtggtacccggtccggagc 34922
Score = 48.1 bits (24), Expect = 0.019
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1924 gtagacgacatgcgacgctcctgcgagctgcaacagcagcagca 1967
||||||||| ||||||||||| ||||||||| ||||||||||
Sbjct: 44724 gtagacgacgtgcgacgctccggcgagctgctggagcagcagca 44681
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 440 bits (222), Expect = e-120
Identities = 482/566 (85%), Gaps = 12/566 (2%)
Strand = Plus / Minus
Query: 1232 accgggtagaagtcagggcactcccacatccccgtgggcgccgagtgcagcggccgccgc 1291
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 20433111 accgggtagaagtccgggcactcccacatccccgtgggcgccgagtgcagcggctgcgcc 20433052
Query: 1292 acccgcctccaccgccggaagtcgcggctacggtacacgtacgccacgccgcggggcggc 1351
| ||| |||||||||||||||| | ||| ||||||||||||||||||||||||| | ||
Sbjct: 20433051 gcgcgcgtccaccgccggaagtccctgctccggtacacgtacgccacgccgcgggactgc 20432992
Query: 1352 gacgaccccgccgcgctgccgacgagcagccgccactgctcggggccggggccgcgccag 1411
||||| ||||||||||||||||||||| || || ||| ||||||||
Sbjct: 20432991 ------cccgcgaggctgccgacgagcagccgccagtggccgt---cggccccgcgccac 20432941
Query: 1412 gccgtggtcgggtcgcggaactgcgtcacgttgatgccgccctcggggacgatgacgggg 1471
|| |||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||
Sbjct: 20432940 gcggtggtcgggtcgcggaactgcgtcgcgttgatgccgccctcgggcacgatcaccggg 20432881
Query: 1472 ttgtgcgagggcttcacccactcccggagcagcgggtccgacacgttcttcgggtacgcc 1531
||||| ||||||||||||||| || ||||||||||||||| ||||| |||| ||||
Sbjct: 20432880 ttgtggccgggcttcacccactcgcgcagcagcgggtccgacccgttcctcggcagcgcc 20432821
Query: 1532 acgttccggacctggtagttgatgtccgggtggtccacgcccgtgtacatgatcaccggg 1591
|||||| | ||||||||||||| ||| ||| ||| ||||| |||||||||||||||||
Sbjct: 20432820 acgttctgcacctggtagttgacgtcggggcggttgacgccggtgtacatgatcaccgg- 20432762
Query: 1592 ccgccgccgtcgggcagcaccgtcgccgacccggaccagcagccgtacctgtcgcccggg 1651
|| | ||||||| || || |||||||||||| ||||||||||||||| ||||| || |
Sbjct: 20432761 -cgtc-ccgtcggccatcatcgtcgccgaccccgaccagcagccgtacttgtcggccctg 20432704
Query: 1652 atgcttggtctgagcgccggctctagcgccacccagttgatgaggtctcgcgacaccgag 1711
||||| || || ||||||| ||||||||||||||||||||||| || ||||| |||
Sbjct: 20432703 atgctgggctcgatggccggcttgagcgccacccagttgatgaggtcacgtgacactgag 20432644
Query: 1712 tgcgcccacacgatgttgccccatacggcgcccttgggattgtattggtagaagaaatgg 1771
||||||||||||||||| ||||| |||||||||||||| ||||| |||||||| | ||||
Sbjct: 20432643 tgcgcccacacgatgttcccccacacggcgcccttggggttgtactggtagaacagatgg 20432584
Query: 1772 taccaccccttgtagtacatgggcgc 1797
|||||||||||||||||||| |||||
Sbjct: 20432583 taccaccccttgtagtacatcggcgc 20432558
Score = 347 bits (175), Expect = 1e-092
Identities = 238/259 (91%)
Strand = Plus / Minus
Query: 915 cctggattccagcccagcctttagccacatcgtcggcggcggtgtcggactcgttagccc 974
|||||||||| |||||||| || ||||| |||||||||||||||||||||||||| ||||
Sbjct: 20433440 cctggattccggcccagcccttggccacgtcgtcggcggcggtgtcggactcgttggccc 20433381
Query: 975 agccccacaggatgcggcgccgcttggccgggtcgtagaacgtcttggacgcgtagaagt 1034
| ||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 20433380 atccccagaggatgcggcggcgcttcgccgggtcgtagaacgtcttggaggcgtagaagt 20433321
Query: 1035 tgccgtagtcgtagcgcaggcggtgctcgtcgccggcggggtcgtccggcacgtaccgct 1094
|||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 20433320 tgccgtagtcgtagcggatgtggtgctcgtcgccggcggggtcgtccggcacgtaccgct 20433261
Query: 1095 cggccctcgggtggtacgtgcccacggtgtagtagtcgtaccgccggaggtcgaggctgt 1154
||||| || ||| |||||| || |||||||||||||||||||| || |||||||||||||
Sbjct: 20433260 cggccttccggtcgtacgttccgacggtgtagtagtcgtaccggcgcaggtcgaggctgt 20433201
Query: 1155 tcttgagcacgtgcttgac 1173
|||||||||||| ||||||
Sbjct: 20433200 tcttgagcacgtacttgac 20433182
Score = 167 bits (84), Expect = 3e-038
Identities = 153/176 (86%)
Strand = Plus / Minus
Query: 237 tcatgaccggcttcttcatctcccacgcggtgagacgggacaccttgacgtgcgccctcc 296
|||||||||||||||||||||||||||||||||| | |||||||||| | |||| |||
Sbjct: 20435661 tcatgaccggcttcttcatctcccacgcggtgagctgcgacaccttgatctccgccttcc 20435602
Query: 297 cgttgttgaacacgtagaggcgagcgtccttgccgatggccagcgacgggtagaccctgg 356
|||| ||||| ||||| ||||| |||| |||||||||||||||||||||||| ||||| |
Sbjct: 20435601 cgttattgaaaacgtaaaggcgcgcgttcttgccgatggccagcgacgggtacaccctcg 20435542
Query: 357 agaggatgcaggtcttgcccccggctccgaagctctcaacgaccgaccggtcgatc 412
| |||||||| | ||| || || || |||||||||||||| ||||||| |||||||
Sbjct: 20435541 acaggatgcacgcctttcctccagccccgaagctctcaacaaccgacctgtcgatc 20435486
Score = 139 bits (70), Expect = 7e-030
Identities = 94/102 (92%)
Strand = Plus / Minus
Query: 954 cggtgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtaga 1013
|||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||||
Sbjct: 20422626 cggtgtcggactcgttggcccagccccagacgatgcggcggcgcttggccgggtcgtaga 20422567
Query: 1014 acgtcttggacgcgtagaagttgccgtagtcgtagcgcaggc 1055
||| |||||| |||||||||| ||||||||||||||| ||||
Sbjct: 20422566 acgacttggatgcgtagaagtcgccgtagtcgtagcggaggc 20422525
Score = 117 bits (59), Expect = 2e-023
Identities = 139/165 (84%), Gaps = 3/165 (1%)
Strand = Plus / Minus
Query: 756 cctgtgccgtttgtatcccggtcacctcgacgtgatgtcctgccttgattaccctgttcc 815
||||||| ||||||| |||||||||||||||||| | |||| ||||| ||||||| |
Sbjct: 20433991 cctgtgcagtttgtagcccggtcacctcgacgtgttcccctggcttgaccaccctgtcct 20433932
Query: 816 tgagagtgaccg---actttgctctcagcgcctccacctcctcgataggccactgcagca 872
||||| |||||| |||| |||||||| ||| ||||||||||| |||||||||| ||
Sbjct: 20433931 tgagaatgaccggccacttccctctcagcctctcgacctcctcgattggccactgcaaca 20433872
Query: 873 gctgcttcccactggggtccagccacaccgtccttggaatcgcct 917
| ||||||||||| |||||||||||||| |||| ||||||||||
Sbjct: 20433871 gttgcttcccacttgggtccagccacactttcctcggaatcgcct 20433827
Score = 103 bits (52), Expect = 4e-019
Identities = 76/84 (90%)
Strand = Plus / Minus
Query: 553 cttgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcaccca 612
|||||||||||||||||| || || || ||||||||| ||| | ||||||||||| ||||
Sbjct: 20423205 cttgaacaccctgaagaagacggccgtcctctccttgaggtcgccggaggccagcgccca 20423146
Query: 613 cagcccgaacggccccacgccgcc 636
||||||||||||||||||||||||
Sbjct: 20423145 cagcccgaacggccccacgccgcc 20423122
Score = 99.6 bits (50), Expect = 6e-018
Identities = 122/146 (83%)
Strand = Plus / Minus
Query: 555 tgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccaca 614
||||||||||||||||||| ||||| |||||| | ||||| || ||||||||||
Sbjct: 20434937 tgaacaccctgaagaacacggcggtcttctcctccagccccgcggacgcgagcacccaca 20434878
Query: 615 gcccgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccg 674
| |||||||||||||||||||||||| |||| |||| | | ||| |||||||| || ||
Sbjct: 20434877 ggccgaacggccccacgccgcccctcgcgtcggcgccccgcgcgctgcacagccgctgcg 20434818
Query: 675 cgtcgtaggccagcgccgggtccagc 700
||||||| |||| |||||||||||||
Sbjct: 20434817 cgtcgtacgccatcgccgggtccagc 20434792
Score = 95.6 bits (48), Expect = 9e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 1668 ccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatgt 1727
||||||| |||||| ||||| ||| ||||| ||| ||||||||||||||| ||||||
Sbjct: 20421909 ccggctccagcgccgtccagtcgatcaggtccgtcgaaaccgagtgcgcccactcgatgt 20421850
Query: 1728 tgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtagt 1787
| ||||| |||||||||||||| ||||| |||||||| | ||||||| | ||||| ||||
Sbjct: 20421849 tcccccacacggcgcccttggggttgtactggtagaacagatggtacaagcccttatagt 20421790
Query: 1788 acat 1791
||||
Sbjct: 20421789 acat 20421786
Score = 79.8 bits (40), Expect = 5e-012
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 1004 gggtcgtagaacgtcttggacgcgtagaagttgccgtagtcgta 1047
||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 26740457 gggtcgtagaacgtcttggacgcgtagaacttgccgtagtcgta 26740414
Score = 73.8 bits (37), Expect = 3e-010
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 1806 cattgatccagttcttggggggctggaagtggtaccccgtcctgagcagggggttgacga 1865
||||||||||||||||||| ||||||||||| ||||| |||| |||| | || |||||
Sbjct: 20431419 cattgatccagttcttgggtggctggaagtgatacccagtccggagctcagagtcgacga 20431360
Query: 1866 tggacggcggcac 1878
|||||||||||||
Sbjct: 20431359 tggacggcggcac 20431347
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccgagtgcagcgg 1284
||||||| ||||||||||||||||| ||| ||||||||||||||||
Sbjct: 20422317 agaagtccgggcactcccacatcccggtgtgcgccgagtgcagcgg 20422272
Score = 65.9 bits (33), Expect = 8e-008
Identities = 69/81 (85%)
Strand = Plus / Minus
Query: 412 caggcttctcagggatatcttgccgttcgagatgtccgtgtcgacaaatcctgcaaatgt 471
|||||| ||||| |||||||| ||||| | |||||||||||| || || |||||||| ||
Sbjct: 20435200 caggctcctcagagatatcttcccgttggtgatgtccgtgtcaacgaaccctgcaaacgt 20435141
Query: 472 cgggcggtacaggttcgggtt 492
||| |||||| |||||||||
Sbjct: 20435140 cggctggtacatgttcgggtt 20435120
Score = 60.0 bits (30), Expect = 5e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 501 acttggtagggtcggtgcacatgagcaccacgggcttg 538
||||||| |||||||||||||||||||| |||||||||
Sbjct: 20435003 acttggtggggtcggtgcacatgagcacgacgggcttg 20434966
Score = 52.0 bits (26), Expect = 0.001
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 944 tcgtcggcggcggtgtcggactcgttagcccagccccacaggatgcggcgccgcttggcc 1003
|||||||| || ||||||||||||| |||| ||||||| | ||| || |||| ||
Sbjct: 33975883 tcgtcggcctcgctgtcggactcgttcacccacgcccacagcacgcgccgtttcttgccc 33975942
Query: 1004 gggtcgtagaacgtcttggacgcgta 1029
| ||||||||||||||||||||||||
Sbjct: 33975943 gcgtcgtagaacgtcttggacgcgta 33975968
Score = 52.0 bits (26), Expect = 0.001
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 734 tcgaagctcacctccacgtcagcctg 759
||||||||||||||||||||||||||
Sbjct: 20434764 tcgaagctcacctccacgtcagcctg 20434739
Score = 50.1 bits (25), Expect = 0.005
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1118 acggtgtagtagtcgtaccgccggaggtcgaggctgttcttgagcacgtgcttgacc 1174
||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 20422459 acggtgtagtactcgtaccgcgtcaggtcgaggctcaccttgagcacgtacttgacc 20422403
Score = 50.1 bits (25), Expect = 0.005
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1808 ttgatccagttcttggggggctggaagtggtaccccgtcctgagc 1852
|||||||||| |||||| || |||||||||||||| |||| ||||
Sbjct: 20421546 ttgatccagtgcttgggtggttggaagtggtacccggtccggagc 20421502
Score = 48.1 bits (24), Expect = 0.019
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 1755 attggtagaagaaatggtaccaccccttgtagtaca 1790
|||||||||| | ||||||||| |||||||||||||
Sbjct: 26739715 attggtagaacagatggtaccatcccttgtagtaca 26739680
Score = 48.1 bits (24), Expect = 0.019
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1924 gtagacgacatgcgacgctcctgcgagctgcaacagcagcagca 1967
||||||||| ||||||||||| ||||||||| ||||||||||
Sbjct: 20431304 gtagacgacgtgcgacgctccggcgagctgctggagcagcagca 20431261
Score = 46.1 bits (23), Expect = 0.076
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 860 ggccactgcagcagctgcttccc 882
|||||||||||||||||||||||
Sbjct: 33978800 ggccactgcagcagctgcttccc 33978822
>gb|CB665439.1|CB665439 OSJNEd11N18.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd11N18 5', mRNA sequence
Length = 783
Score = 244 bits (123), Expect = 2e-061
Identities = 307/367 (83%), Gaps = 6/367 (1%)
Strand = Plus / Minus
Query: 335 gccagcgacgggtagaccctggagaggatgcaggtcttgcccccggctccgaagctctca 394
|||| ||||||||| || || || ||||||||||||||||||||||| ||||||||||||
Sbjct: 711 gccatcgacgggtaaactctcgacaggatgcaggtcttgcccccggcgccgaagctctca 652
Query: 395 acgaccgaccggtcgatcaggcttctcagggatatcttgccgttcgagatgtccgtgtcg 454
|| ||||| ||||| |||| |||||||| ||| ||||| ||| ||||||||| ||||||
Sbjct: 651 accaccgaacggtcaatcaagcttctcaaggagatcttcccggacgagatgtcggtgtcg 592
Query: 455 acaaatcctgcaaatgtcgggcggtacaggttcgggttcagggacgacttggtagggtcg 514
|| || || ||||| || || ||| || | |||| | || || |||||||||||||||
Sbjct: 591 acgaacccggcaaaagttggcttgtagagatccgggctaagagaagacttggtagggtcg 532
Query: 515 gtgcacatgagcaccacgggcttgtcgccgg---cggcgggcttgaacaccctgaagaac 571
||||||||||| || ||||||||| ||||| |||| |||||||| || | ||||||
Sbjct: 531 gtgcacatgaggacgacgggcttggcgccgtgcccggccggcttgaagacgcggaagaag 472
Query: 572 accgcggttctctccttgcggttggcggaggccagcacccacagcccgaacggccccacg 631
|| |||||| |||||| || |||||||||||||||||||||||||||| |||||
Sbjct: 471 acggcggttttctcctccaggccggcggaggccagcacccacagcccgaaca---ccacg 415
Query: 632 ccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcgtcgtaggccagcgcc 691
||||||||||||||||||| |||| |||||||||||||||||||||||| | | | ||||
Sbjct: 414 ccgcccctcacgtccgcgcccttcgcgccgcacagcctctccgcgtcgtcgccgaacgcc 355
Query: 692 gggtcca 698
|||||||
Sbjct: 354 gggtcca 348
Score = 85.7 bits (43), Expect = 9e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 836 ctcagcgcctccacctcctcgataggccactgcagcagctgcttcccactggggtccagc 895
||||||| ||||| ||||||||| ||||||||||| ||||||||||| || |||||||||
Sbjct: 216 ctcagcgtctccagctcctcgattggccactgcagaagctgcttcccgctcgggtccagc 157
Query: 896 cacaccgtccttggaatcgcctg 918
|| ||| | ||||| ||||||||
Sbjct: 156 catacctttcttgggatcgcctg 134
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 728 gacacttcgaagctcacctccacgtcagcctg 759
||||| || |||||||||||||||||||||||
Sbjct: 324 gacacctccaagctcacctccacgtcagcctg 293
>gb|AY578158.1| Oryza sativa (japonica cultivar-group) cell-wall invertase 1 mRNA,
complete cds
Length = 2129
Score = 244 bits (123), Expect = 2e-061
Identities = 307/367 (83%), Gaps = 6/367 (1%)
Strand = Plus / Minus
Query: 335 gccagcgacgggtagaccctggagaggatgcaggtcttgcccccggctccgaagctctca 394
|||| ||||||||| || || || ||||||||||||||||||||||| ||||||||||||
Sbjct: 1639 gccatcgacgggtaaactctcgacaggatgcaggtcttgcccccggcgccgaagctctca 1580
Query: 395 acgaccgaccggtcgatcaggcttctcagggatatcttgccgttcgagatgtccgtgtcg 454
|| ||||| ||||| |||| |||||||| ||| ||||| ||| ||||||||| ||||||
Sbjct: 1579 accaccgaacggtcaatcaagcttctcaaggagatcttcccggacgagatgtcggtgtcg 1520
Query: 455 acaaatcctgcaaatgtcgggcggtacaggttcgggttcagggacgacttggtagggtcg 514
|| || || ||||| || || ||| || | |||| | || || |||||||||||||||
Sbjct: 1519 acgaacccggcaaaagttggcttgtagagatccgggctaagagaagacttggtagggtcg 1460
Query: 515 gtgcacatgagcaccacgggcttgtcgccgg---cggcgggcttgaacaccctgaagaac 571
||||||||||| || ||||||||| ||||| |||| |||||||| || | ||||||
Sbjct: 1459 gtgcacatgaggacgacgggcttggcgccgtgcccggccggcttgaagacgcggaagaag 1400
Query: 572 accgcggttctctccttgcggttggcggaggccagcacccacagcccgaacggccccacg 631
|| |||||| |||||| || |||||||||||||||||||||||||||| |||||
Sbjct: 1399 acggcggttttctcctccaggccggcggaggccagcacccacagcccgaaca---ccacg 1343
Query: 632 ccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcgtcgtaggccagcgcc 691
||||||||||||||||||| |||| |||||||||||||||||||||||| | | | ||||
Sbjct: 1342 ccgcccctcacgtccgcgcccttcgcgccgcacagcctctccgcgtcgtcgccgaacgcc 1283
Query: 692 gggtcca 698
|||||||
Sbjct: 1282 gggtcca 1276
Score = 190 bits (96), Expect = 2e-045
Identities = 276/336 (82%)
Strand = Plus / Minus
Query: 836 ctcagcgcctccacctcctcgataggccactgcagcagctgcttcccactggggtccagc 895
||||||| ||||| ||||||||| ||||||||||| ||||||||||| || |||||||||
Sbjct: 1144 ctcagcgtctccagctcctcgattggccactgcagaagctgcttcccgctcgggtccagc 1085
Query: 896 cacaccgtccttggaatcgcctggattccagcccagcctttagccacatcgtcggcggcg 955
|| ||| | ||||| ||||| ||||| || |||||||| || ||| |||| || | ||
Sbjct: 1084 catacctttcttgggatcgcatggatgccggcccagcccttcgccttgtcgtaggtgacg 1025
Query: 956 gtgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtagaac 1015
||||||||||||||||||| || |||||||||||| |||| |||||||| ||||
Sbjct: 1024 ctgtcggactcgttagcccacccaagcaggatgcggcggtgcttcaccgggtcgaagaag 965
Query: 1016 gtcttggacgcgtagaagttgccgtagtcgtagcgcaggcggtgctcgtcgccggcgggg 1075
||||| || |||||||||||||||||||| ||||| || ||||| | |||||| || |||
Sbjct: 964 gtctttgatgcgtagaagttgccgtagtcatagcggagccggtggtagtcgccagcaggg 905
Query: 1076 tcgtccggcacgtaccgctcggccctcgggtggtacgtgcccacggtgtagtagtcgtac 1135
| ||||||||| |||||||| | | | || ||| ||||||| ||||||||||| ||
Sbjct: 904 ttgtccggcacataccgctccgtcaccttgttgtagatgcccaccgtgtagtagtcataa 845
Query: 1136 cgccggaggtcgaggctgttcttgagcacgtgcttg 1171
|| ||| |||||||||||||||||||||| ||||
Sbjct: 844 cgggtgagatcgaggctgttcttgagcacgtacttg 809
Score = 161 bits (81), Expect = 2e-036
Identities = 180/213 (84%)
Strand = Plus / Minus
Query: 1667 gccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatg 1726
|||||||| || || | ||||||||||||||| | || |||||||| |||||||||||
Sbjct: 340 gccggctcaagggctatccagttgatgaggtcctgtgataccgagtgagcccacacgata 281
Query: 1727 ttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtag 1786
|||||||| || || |||||||| ||||| |||||||| | |||||||| ||||||||
Sbjct: 280 ttgccccacacagctcccttggggttgtactggtagaataggtggtaccatcccttgtaa 221
Query: 1787 tacatgggcgcgttgggatcattgatccagttcttggggggctggaagtggtaccccgtc 1846
|||| ||| |||| ||||| |||||||||||| | ||||||||||||||||| || |||
Sbjct: 220 tacagtggcccgttcggatcgttgatccagttcatcgggggctggaagtggtatcctgtc 161
Query: 1847 ctgagcagggggttgacgatggacggcggcacc 1879
|||||||||||| |||| ||||| | |||||||
Sbjct: 160 ctgagcagggggctgacaatggaggccggcacc 128
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccga 1275
||||||| ||||||||||||||||| ||| |||||||
Sbjct: 753 agaagtctgggcactcccacatcccagtgagcgccga 717
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 728 gacacttcgaagctcacctccacgtcagcctg 759
||||| || |||||||||||||||||||||||
Sbjct: 1252 gacacctccaagctcacctccacgtcagcctg 1221
>dbj|AK121403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132A09, full
insert sequence
Length = 2103
Score = 236 bits (119), Expect = 4e-059
Identities = 306/367 (83%), Gaps = 6/367 (1%)
Strand = Plus / Minus
Query: 335 gccagcgacgggtagaccctggagaggatgcaggtcttgcccccggctccgaagctctca 394
|||| ||||||||| || || || ||||||||||||||||||||||| ||||||||||||
Sbjct: 1689 gccatcgacgggtaaactctcgacaggatgcaggtcttgcccccggcgccgaagctctca 1630
Query: 395 acgaccgaccggtcgatcaggcttctcagggatatcttgccgttcgagatgtccgtgtcg 454
|| ||||| ||||| |||| |||||||| ||| ||||| ||| ||||||||| ||||||
Sbjct: 1629 accaccgaacggtcaatcaagcttctcaaggagatcttcccggacgagatgtcggtgtcg 1570
Query: 455 acaaatcctgcaaatgtcgggcggtacaggttcgggttcagggacgacttggtagggtcg 514
|| || || ||||| || || ||| || | | || | || || |||||||||||||||
Sbjct: 1569 acgaacccggcaaaagttggcttgtagagatcctggctaagagaagacttggtagggtcg 1510
Query: 515 gtgcacatgagcaccacgggcttgtcgccgg---cggcgggcttgaacaccctgaagaac 571
||||||||||| || ||||||||| ||||| |||| |||||||| || | ||||||
Sbjct: 1509 gtgcacatgaggacgacgggcttggcgccgtgcccggccggcttgaagacgcggaagaag 1450
Query: 572 accgcggttctctccttgcggttggcggaggccagcacccacagcccgaacggccccacg 631
|| |||||| |||||| || |||||||||||||||||||||||||||| |||||
Sbjct: 1449 acggcggttttctcctccaggccggcggaggccagcacccacagcccgaaca---ccacg 1393
Query: 632 ccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcgtcgtaggccagcgcc 691
||||||||||||||||||| |||| |||||||||||||||||||||||| | | | ||||
Sbjct: 1392 ccgcccctcacgtccgcgcccttcgcgccgcacagcctctccgcgtcgtcgccgaacgcc 1333
Query: 692 gggtcca 698
|||||||
Sbjct: 1332 gggtcca 1326
Score = 190 bits (96), Expect = 2e-045
Identities = 276/336 (82%)
Strand = Plus / Minus
Query: 836 ctcagcgcctccacctcctcgataggccactgcagcagctgcttcccactggggtccagc 895
||||||| ||||| ||||||||| ||||||||||| ||||||||||| || |||||||||
Sbjct: 1194 ctcagcgtctccagctcctcgattggccactgcagaagctgcttcccgctcgggtccagc 1135
Query: 896 cacaccgtccttggaatcgcctggattccagcccagcctttagccacatcgtcggcggcg 955
|| ||| | ||||| ||||| ||||| || |||||||| || ||| |||| || | ||
Sbjct: 1134 catacctttcttgggatcgcatggatgccggcccagcccttcgccttgtcgtaggtgacg 1075
Query: 956 gtgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtagaac 1015
||||||||||||||||||| || |||||||||||| |||| |||||||| ||||
Sbjct: 1074 ctgtcggactcgttagcccacccaagcaggatgcggcggtgcttcaccgggtcgaagaag 1015
Query: 1016 gtcttggacgcgtagaagttgccgtagtcgtagcgcaggcggtgctcgtcgccggcgggg 1075
||||| || |||||||||||||||||||| ||||| || ||||| | |||||| || |||
Sbjct: 1014 gtctttgatgcgtagaagttgccgtagtcatagcggagccggtggtagtcgccagcaggg 955
Query: 1076 tcgtccggcacgtaccgctcggccctcgggtggtacgtgcccacggtgtagtagtcgtac 1135
| ||||||||| |||||||| | | | || ||| ||||||| ||||||||||| ||
Sbjct: 954 ttgtccggcacataccgctccgtcaccttgttgtagatgcccaccgtgtagtagtcataa 895
Query: 1136 cgccggaggtcgaggctgttcttgagcacgtgcttg 1171
|| ||| |||||||||||||||||||||| ||||
Sbjct: 894 cgggtgagatcgaggctgttcttgagcacgtacttg 859
Score = 161 bits (81), Expect = 2e-036
Identities = 180/213 (84%)
Strand = Plus / Minus
Query: 1667 gccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatg 1726
|||||||| || || | ||||||||||||||| | || |||||||| |||||||||||
Sbjct: 389 gccggctcaagggctatccagttgatgaggtcctgtgataccgagtgagcccacacgata 330
Query: 1727 ttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtag 1786
|||||||| || || |||||||| ||||| |||||||| | |||||||| ||||||||
Sbjct: 329 ttgccccacacagctcccttggggttgtactggtagaataggtggtaccatcccttgtaa 270
Query: 1787 tacatgggcgcgttgggatcattgatccagttcttggggggctggaagtggtaccccgtc 1846
|||| ||| |||| ||||| |||||||||||| | ||||||||||||||||| || |||
Sbjct: 269 tacagtggcccgttcggatcgttgatccagttcatcgggggctggaagtggtatcctgtc 210
Query: 1847 ctgagcagggggttgacgatggacggcggcacc 1879
|||||||||||| |||| ||||| | |||||||
Sbjct: 209 ctgagcagggggctgacaatggaggccggcacc 177
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccga 1275
||||||| ||||||||||||||||| ||| |||||||
Sbjct: 803 agaagtctgggcactcccacatcccagtgagcgccga 767
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 728 gacacttcgaagctcacctccacgtcagcctg 759
||||| || |||||||||||||||||||||||
Sbjct: 1302 gacacctccaagctcacctccacgtcagcctg 1271
>dbj|AB073749.1| Oryza sativa (japonica cultivar-group) OsCIN1 mRNA for cell wall
invertase, complete cds
Length = 2203
Score = 228 bits (115), Expect = 1e-056
Identities = 305/367 (83%), Gaps = 6/367 (1%)
Strand = Plus / Minus
Query: 335 gccagcgacgggtagaccctggagaggatgcaggtcttgcccccggctccgaagctctca 394
|||| ||||||||| || || || ||||||||||||||||||||||| ||||||||||||
Sbjct: 1684 gccatcgacgggtaaactctcgacaggatgcaggtcttgcccccggcgccgaagctctca 1625
Query: 395 acgaccgaccggtcgatcaggcttctcagggatatcttgccgttcgagatgtccgtgtcg 454
|| ||||| ||||| |||| |||||||| ||| ||||| ||| ||||||||| ||||||
Sbjct: 1624 accaccgaacggtcaatcaagcttctcaaggagatcttcccggacgagatgtcggtgtcg 1565
Query: 455 acaaatcctgcaaatgtcgggcggtacaggttcgggttcagggacgacttggtagggtcg 514
|| || || ||||| || || ||| || | |||| | || || |||||||||||||||
Sbjct: 1564 acgaacccggcaaaagttggcttgtagagatccgggctaagagaagacttggtagggtcg 1505
Query: 515 gtgcacatgagcaccacgggcttgtcgccgg---cggcgggcttgaacaccctgaagaac 571
||||||||||| || ||||||| | ||||| |||| |||||||| || | ||||||
Sbjct: 1504 gtgcacatgaggacgacgggctcggcgccgtgcccggccggcttgaagacgcggaagaag 1445
Query: 572 accgcggttctctccttgcggttggcggaggccagcacccacagcccgaacggccccacg 631
|| |||||| |||||| || |||||||||||||||||||||||||||| |||||
Sbjct: 1444 acggcggttttctcctccaggccggcggaggccagcacccacagcccgaaca---ccacg 1388
Query: 632 ccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcgtcgtaggccagcgcc 691
||||||||||||||||||| |||| ||||||||||||||||||||| || | | | ||||
Sbjct: 1387 ccgcccctcacgtccgcgcccttcgcgccgcacagcctctccgcgttgtcgccgaacgcc 1328
Query: 692 gggtcca 698
|||||||
Sbjct: 1327 gggtcca 1321
Score = 190 bits (96), Expect = 2e-045
Identities = 276/336 (82%)
Strand = Plus / Minus
Query: 836 ctcagcgcctccacctcctcgataggccactgcagcagctgcttcccactggggtccagc 895
||||||| ||||| ||||||||| ||||||||||| ||||||||||| || |||||||||
Sbjct: 1189 ctcagcgtctccagctcctcgattggccactgcagaagctgcttcccgctcgggtccagc 1130
Query: 896 cacaccgtccttggaatcgcctggattccagcccagcctttagccacatcgtcggcggcg 955
|| ||| | ||||| ||||| ||||| || |||||||| || ||| |||| || | ||
Sbjct: 1129 catacctttcttgggatcgcatggatgccggcccagcccttcgccttgtcgtaggtgacg 1070
Query: 956 gtgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtagaac 1015
||||||||||||||||||| || |||||||||||| |||| |||||||| ||||
Sbjct: 1069 ctgtcggactcgttagcccacccaagcaggatgcggcggtgcttcaccgggtcgaagaag 1010
Query: 1016 gtcttggacgcgtagaagttgccgtagtcgtagcgcaggcggtgctcgtcgccggcgggg 1075
||||| || |||||||||||||||||||| ||||| || ||||| | |||||| || |||
Sbjct: 1009 gtctttgatgcgtagaagttgccgtagtcatagcggagccggtggtagtcgccagcaggg 950
Query: 1076 tcgtccggcacgtaccgctcggccctcgggtggtacgtgcccacggtgtagtagtcgtac 1135
| ||||||||| |||||||| | | | || ||| ||||||| ||||||||||| ||
Sbjct: 949 ttgtccggcacataccgctccgtcaccttgttgtagatgcccaccgtgtagtagtcataa 890
Query: 1136 cgccggaggtcgaggctgttcttgagcacgtgcttg 1171
|| ||| |||||||||||||||||||||| ||||
Sbjct: 889 cgggtgagatcgaggctgttcttgagcacgtacttg 854
Score = 161 bits (81), Expect = 2e-036
Identities = 180/213 (84%)
Strand = Plus / Minus
Query: 1667 gccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatg 1726
|||||||| || || | ||||||||||||||| | || |||||||| |||||||||||
Sbjct: 385 gccggctcaagggctatccagttgatgaggtcctgtgataccgagtgagcccacacgata 326
Query: 1727 ttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtag 1786
|||||||| || || |||||||| ||||| |||||||| | |||||||| ||||||||
Sbjct: 325 ttgccccacacagctcccttggggttgtactggtagaataggtggtaccatcccttgtaa 266
Query: 1787 tacatgggcgcgttgggatcattgatccagttcttggggggctggaagtggtaccccgtc 1846
|||| ||| |||| ||||| |||||||||||| | ||||||||||||||||| || |||
Sbjct: 265 tacagtggcccgttcggatcgttgatccagttcatcgggggctggaagtggtatcctgtc 206
Query: 1847 ctgagcagggggttgacgatggacggcggcacc 1879
|||||||||||| |||| ||||| | |||||||
Sbjct: 205 ctgagcagggggctgacaatggaggccggcacc 173
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccga 1275
||||||| ||||||||||||||||| ||| |||||||
Sbjct: 798 agaagtctgggcactcccacatcccagtgagcgccga 762
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 728 gacacttcgaagctcacctccacgtcagcctg 759
||||| || |||||||||||||||||||||||
Sbjct: 1297 gacacctccaagctcacctccacgtcagcctg 1266
>gb|CB656705.1|CB656705 OSJNEc11F17.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11F17 3', mRNA sequence
Length = 810
Score = 192 bits (97), Expect = 5e-046
Identities = 263/317 (82%), Gaps = 6/317 (1%)
Strand = Plus / Plus
Query: 335 gccagcgacgggtagaccctggagaggatgcaggtcttgcccccggctccgaagctctca 394
|||| ||||||||| || || || ||||||||||||||||||||||| ||||||||||||
Sbjct: 497 gccatcgacgggtaaactctcgacaggatgcaggtcttgcccccggcgccgaagctctca 556
Query: 395 acgaccgaccggtcgatcaggcttctcagggatatcttgccgttcgagatgtccgtgtcg 454
|| ||||| ||||| |||| |||||||| ||| ||||| ||| ||||||||| ||||||
Sbjct: 557 accaccgaacggtcaatcaagcttctcaaggagatcttcccggacgagatgtcggtgtcg 616
Query: 455 acaaatcctgcaaatgtcgggcggtacaggttcgggttcagggacgacttggtagggtcg 514
|| || || ||||| || || ||| || | |||| | || || |||||||||||||||
Sbjct: 617 acgaacccggcaaaagttggcttgtagagatccgggctaagagaagacttggtagggtcg 676
Query: 515 gtgcacatgagcaccacgggcttgtcgccg---gcggcgggcttgaacaccctgaagaac 571
||||||||||| || ||||||||| ||||| |||| |||||||| || | ||||||
Sbjct: 677 gtgcacatgaggacgacgggcttggcgccgtgcccggccggcttgaagacgcggaagaag 736
Query: 572 accgcggttctctccttgcggttggcggaggccagcacccacagcccgaacggccccacg 631
|| |||||| |||||| || ||||||||||||||||||||||||||| | |||||
Sbjct: 737 acggcggttttctcctccaggccggcggaggccagcacccacagcccgaa---caccacg 793
Query: 632 ccgcccctcacgtccgc 648
|||||||||||||||||
Sbjct: 794 ccgcccctcacgtccgc 810
>gb|CB647638.1|CB647638 OSJNEb10K09.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10K09 5', mRNA sequence
Length = 731
Score = 190 bits (96), Expect = 2e-045
Identities = 276/336 (82%)
Strand = Plus / Minus
Query: 836 ctcagcgcctccacctcctcgataggccactgcagcagctgcttcccactggggtccagc 895
||||||| ||||| ||||||||| ||||||||||| ||||||||||| || |||||||||
Sbjct: 364 ctcagcgtctccagctcctcgattggccactgcagaagctgcttcccgctcgggtccagc 305
Query: 896 cacaccgtccttggaatcgcctggattccagcccagcctttagccacatcgtcggcggcg 955
|| ||| | ||||| ||||| ||||| || |||||||| | |||| |||| || | ||
Sbjct: 304 catacctttcttgggatcgcatggatgccggcccagccctcagccttgtcgtaggtgacg 245
Query: 956 gtgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtagaac 1015
||||||||||||||||||| || |||||||||||| |||| |||||||| ||||
Sbjct: 244 ctgtcggactcgttagcccacccaagcaggatgcggcggtgcttcaccgggtcgaagaag 185
Query: 1016 gtcttggacgcgtagaagttgccgtagtcgtagcgcaggcggtgctcgtcgccggcgggg 1075
||||| || |||||||||||||||||||| ||||| || ||||| | |||||| || |||
Sbjct: 184 gtctttgatgcgtagaagttgccgtagtcatagcggagccggtggtagtcgccagcaggg 125
Query: 1076 tcgtccggcacgtaccgctcggccctcgggtggtacgtgcccacggtgtagtagtcgtac 1135
| ||||||||| |||||||| | | | || ||| ||||||| ||||||||||| ||
Sbjct: 124 ttgtccggcacataccgctccgtcaccttgttgtagatgcccaccgtgtagtagtcataa 65
Query: 1136 cgccggaggtcgaggctgttcttgagcacgtgcttg 1171
|| ||| |||||||||||||||||||||| ||||
Sbjct: 64 cgggtgagatcgaggctgttcttgagcacgtacttg 29
Score = 131 bits (66), Expect = 2e-027
Identities = 169/202 (83%), Gaps = 6/202 (2%)
Strand = Plus / Minus
Query: 500 gacttggtagggtcggtgcacatgagcaccacgggcttgtcgccgg---cggcgggcttg 556
|||||||||||||||||||||||||| || ||||| ||| ||||| |||| |||| |
Sbjct: 694 gacttggtagggtcggtgcacatgaggacgacgggtttgacgccgtgcccggccggctgg 635
Query: 557 aacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccacagc 616
|| || | |||||| || |||||| |||| | || ||||||||||||||||||||||
Sbjct: 634 aagacgcggaagaagacggcggttttctcttccaggccggcggaggccagcacccacagc 575
Query: 617 ccgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcg 676
| |||| |||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 574 ctgaaca---ccacgccgcccctcacgtccgcgcccttcgcgccgcacagcctctccgcg 518
Query: 677 tcgtaggccagcgccgggtcca 698
|||| | | | |||||||||||
Sbjct: 517 tcgtcgccgaacgccgggtcca 496
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 728 gacacttcgaagctcacctccacgtcagcctg 759
||||| || |||||||||||||||||||||||
Sbjct: 472 gacacctccaagctcacctccacgtcagcctg 441
>gb|CB656668.1|CB656668 OSJNEc11E15.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11E15 5', mRNA sequence
Length = 839
Score = 190 bits (96), Expect = 2e-045
Identities = 276/336 (82%)
Strand = Plus / Minus
Query: 836 ctcagcgcctccacctcctcgataggccactgcagcagctgcttcccactggggtccagc 895
||||||| ||||| ||||||||| ||||||||||| ||||||||||| || |||||||||
Sbjct: 484 ctcagcgtctccagctcctcgattggccactgcagaagctgcttcccgctcgggtccagc 425
Query: 896 cacaccgtccttggaatcgcctggattccagcccagcctttagccacatcgtcggcggcg 955
|| ||| | ||||| ||||| ||||| || |||||||| || ||| |||| || | ||
Sbjct: 424 catacctttcttgggatcgcatggatgccggcccagcccttcgccttgtcgtaggtgacg 365
Query: 956 gtgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtagaac 1015
||||||||||||||||||| || |||||||||||| |||| |||||||| ||||
Sbjct: 364 ctgtcggactcgttagcccacccaagcaggatgcggcggtgcttcaccgggtcgaagaag 305
Query: 1016 gtcttggacgcgtagaagttgccgtagtcgtagcgcaggcggtgctcgtcgccggcgggg 1075
||||| || |||||||||||||||||||| ||||| || ||||| | |||||| || |||
Sbjct: 304 gtctttgatgcgtagaagttgccgtagtcatagcggagccggtggtagtcgccagcaggg 245
Query: 1076 tcgtccggcacgtaccgctcggccctcgggtggtacgtgcccacggtgtagtagtcgtac 1135
| ||||||||| |||||||| | | | || ||| ||||||| ||||||||||| ||
Sbjct: 244 ttgtccggcacataccgctccgtcaccttgttgtagatgcccaccgtgtagtagtcataa 185
Query: 1136 cgccggaggtcgaggctgttcttgagcacgtgcttg 1171
|| ||| |||||||||||||||||||||| ||||
Sbjct: 184 cgggtgagatcgaggctgttcttgagcacgtacttg 149
Score = 155 bits (78), Expect = 1e-034
Identities = 172/202 (85%), Gaps = 6/202 (2%)
Strand = Plus / Minus
Query: 500 gacttggtagggtcggtgcacatgagcaccacgggcttgtcgccgg---cggcgggcttg 556
|||||||||||||||||||||||||| || ||||||| | ||||| |||| ||||||
Sbjct: 814 gacttggtagggtcggtgcacatgaggacgacgggctgggcgccgtgcccggccggcttg 755
Query: 557 aacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccacagc 616
|| || | |||||| || |||||| |||||| || ||||||||||||||||||||||
Sbjct: 754 aagacgcggaagaagacggcggttttctcctccaggccggcggaggccagcacccacagc 695
Query: 617 ccgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcg 676
|||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 694 ccgaaca---ccacgccgcccctcacgtccgcgcccttcgcgccgcacagcctctccgcg 638
Query: 677 tcgtaggccagcgccgggtcca 698
|||| | | | |||||||||||
Sbjct: 637 tcgtcgccgaacgccgggtcca 616
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccga 1275
||||||| ||||||||||||||||| ||| |||||||
Sbjct: 93 agaagtctgggcactcccacatcccagtgagcgccga 57
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 728 gacacttcgaagctcacctccacgtcagcctg 759
||||| || |||||||||||||||||||||||
Sbjct: 592 gacacctccaagctcacctccacgtcagcctg 561
>gb|CB656704.1|CB656704 OSJNEc11F17.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11F17 5', mRNA sequence
Length = 806
Score = 190 bits (96), Expect = 2e-045
Identities = 276/336 (82%)
Strand = Plus / Minus
Query: 836 ctcagcgcctccacctcctcgataggccactgcagcagctgcttcccactggggtccagc 895
||||||| ||||| ||||||||| ||||||||||| ||||||||||| || |||||||||
Sbjct: 483 ctcagcgtctccagctcctcgattggccactgcagaagctgcttcccgctcgggtccagc 424
Query: 896 cacaccgtccttggaatcgcctggattccagcccagcctttagccacatcgtcggcggcg 955
|| ||| | ||||| ||||| ||||| || |||||||| || ||| |||| || | ||
Sbjct: 423 catacctttcttgggatcgcatggatgccggcccagcccttcgccttgtcgtaggtgacg 364
Query: 956 gtgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtagaac 1015
||||||||||||||||||| || |||||||||||| |||| |||||||| ||||
Sbjct: 363 ctgtcggactcgttagcccacccaagcaggatgcggcggtgcttcaccgggtcgaagaag 304
Query: 1016 gtcttggacgcgtagaagttgccgtagtcgtagcgcaggcggtgctcgtcgccggcgggg 1075
||||| || |||||||||||||||||||| ||||| || ||||| | |||||| || |||
Sbjct: 303 gtctttgatgcgtagaagttgccgtagtcatagcggagccggtggtagtcgccagcaggg 244
Query: 1076 tcgtccggcacgtaccgctcggccctcgggtggtacgtgcccacggtgtagtagtcgtac 1135
| ||||||||| |||||||| | | | || ||| ||||||| ||||||||||| ||
Sbjct: 243 ttgtccggcacataccgctccgtcaccttgttgtagatgcccaccgtgtagtagtcataa 184
Query: 1136 cgccggaggtcgaggctgttcttgagcacgtgcttg 1171
|| ||| |||||||||||||||||||||| ||||
Sbjct: 183 cgggtgagatcgaggctgttcttgagcacgtacttg 148
Score = 149 bits (75), Expect = 7e-033
Identities = 166/195 (85%), Gaps = 6/195 (3%)
Strand = Plus / Minus
Query: 507 tagggtcggtgcacatgagcaccacgggcttgtcgccgg---cggcgggcttgaacaccc 563
||||||||||||||||||| || ||||||||| ||||| |||| |||||||| || |
Sbjct: 806 tagggtcggtgcacatgaggacgacgggcttggcgccgtgcccggccggcttgaagacgc 747
Query: 564 tgaagaacaccgcggttctctccttgcggttggcggaggccagcacccacagcccgaacg 623
|||||| || |||||| |||||| || ||||||||||||||||||||||||||||
Sbjct: 746 ggaagaagacggcggttttctcctccaggccggcggaggccagcacccacagcccgaaca 687
Query: 624 gccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcgtcgtagg 683
|||||||||||||||||||||||| |||| |||||||||||||||||||||||| |
Sbjct: 686 ---ccacgccgcccctcacgtccgcgcccttcgcgccgcacagcctctccgcgtcgtcgc 630
Query: 684 ccagcgccgggtcca 698
| | |||||||||||
Sbjct: 629 cgaacgccgggtcca 615
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccga 1275
||||||| ||||||||||||||||| ||| |||||||
Sbjct: 92 agaagtctgggcactcccacatcccagtgagcgccga 56
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 728 gacacttcgaagctcacctccacgtcagcctg 759
||||| || |||||||||||||||||||||||
Sbjct: 591 gacacctccaagctcacctccacgtcagcctg 560
>gb|CB656730.1|CB656730 OSJNEc11G13.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11G13 5', mRNA sequence
Length = 775
Score = 190 bits (96), Expect = 2e-045
Identities = 276/336 (82%)
Strand = Plus / Minus
Query: 836 ctcagcgcctccacctcctcgataggccactgcagcagctgcttcccactggggtccagc 895
||||||| ||||| ||||||||| ||||||||||| ||||||||||| || |||||||||
Sbjct: 483 ctcagcgtctccagctcctcgattggccactgcagaagctgcttcccgctcgggtccagc 424
Query: 896 cacaccgtccttggaatcgcctggattccagcccagcctttagccacatcgtcggcggcg 955
|| ||| | ||||| ||||| ||||| || |||||||| || ||| |||| || | ||
Sbjct: 423 catacctttcttgggatcgcatggatgccggcccagcccttcgccttgtcgtaggtgacg 364
Query: 956 gtgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtagaac 1015
||||||||||||||||||| || |||||||||||| |||| |||||||| ||||
Sbjct: 363 ctgtcggactcgttagcccacccaagcaggatgcggcggtgcttcaccgggtcgaagaag 304
Query: 1016 gtcttggacgcgtagaagttgccgtagtcgtagcgcaggcggtgctcgtcgccggcgggg 1075
||||| || |||||||||||||||||||| ||||| || ||||| | |||||| || |||
Sbjct: 303 gtctttgatgcgtagaagttgccgtagtcatagcggagccggtggtagtcgccagcaggg 244
Query: 1076 tcgtccggcacgtaccgctcggccctcgggtggtacgtgcccacggtgtagtagtcgtac 1135
| ||||||||| |||||||| | | | || ||| ||||||| ||||||||||| ||
Sbjct: 243 ttgtccggcacataccgctccgtcaccttgttgtagatgcccaccgtgtagtagtcataa 184
Query: 1136 cgccggaggtcgaggctgttcttgagcacgtgcttg 1171
|| ||| |||||||||||||||||||||| ||||
Sbjct: 183 cgggtgagatcgaggctgttcttgagcacgtacttg 148
Score = 117 bits (59), Expect = 2e-023
Identities = 130/153 (84%), Gaps = 3/153 (1%)
Strand = Plus / Minus
Query: 546 cggcgggcttgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggcca 605
|||| |||||||| || | |||||| || |||||| |||||| || |||||||||||
Sbjct: 764 cggccggcttgaagacgcggaagaagacggcggttttctcctccaggccggcggaggcca 705
Query: 606 gcacccacagcccgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcaca 665
||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||
Sbjct: 704 gcacccacagcccgaaca---ccacgccgcccctcacgtccgcgcccttcgcgccgcaca 648
Query: 666 gcctctccgcgtcgtaggccagcgccgggtcca 698
||||||| ||||||| | | | |||||||||||
Sbjct: 647 gcctctctgcgtcgtcgccgaacgccgggtcca 615
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccga 1275
||||||| ||||||||||||||||| ||| |||||||
Sbjct: 92 agaagtctgggcactcccacatcccagtgagcgccga 56
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 728 gacacttcgaagctcacctccacgtcagcctg 759
||||| || |||||||||||||||||||||||
Sbjct: 591 gacacctccaagctcacctccacgtcagcctg 560
>gb|CB656758.1|CB656758 OSJNEc11H12.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11H12 5', mRNA sequence
Length = 817
Score = 190 bits (96), Expect = 2e-045
Identities = 276/336 (82%)
Strand = Plus / Minus
Query: 836 ctcagcgcctccacctcctcgataggccactgcagcagctgcttcccactggggtccagc 895
||||||| ||||| ||||||||| ||||||||||| ||||||||||| || |||||||||
Sbjct: 483 ctcagcgtctccagctcctcgattggccactgcagaagctgcttcccgctcgggtccagc 424
Query: 896 cacaccgtccttggaatcgcctggattccagcccagcctttagccacatcgtcggcggcg 955
|| ||| | ||||| ||||| ||||| || |||||||| || ||| |||| || | ||
Sbjct: 423 catacctttcttgggatcgcatggatgccggcccagcccttcgccttgtcgtaggtgacg 364
Query: 956 gtgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtagaac 1015
||||||||||||||||||| || |||||||||||| |||| |||||||| ||||
Sbjct: 363 ctgtcggactcgttagcccacccaagcaggatgcggcggtgcttcaccgggtcgaagaag 304
Query: 1016 gtcttggacgcgtagaagttgccgtagtcgtagcgcaggcggtgctcgtcgccggcgggg 1075
||||| || |||||||||||||||||||| ||||| || ||||| | |||||| || |||
Sbjct: 303 gtctttgatgcgtagaagttgccgtagtcatagcggagccggtggtagtcgccagcaggg 244
Query: 1076 tcgtccggcacgtaccgctcggccctcgggtggtacgtgcccacggtgtagtagtcgtac 1135
| ||||||||| |||||||| | | | || ||| ||||||| ||||||||||| ||
Sbjct: 243 ttgtccggcacataccgctccgtcaccttgttgtagatgcccaccgtgtagtagtcataa 184
Query: 1136 cgccggaggtcgaggctgttcttgagcacgtgcttg 1171
|| ||| |||||||||||||||||||||| ||||
Sbjct: 183 cgggtgagatcgaggctgttcttgagcacgtacttg 148
Score = 163 bits (82), Expect = 5e-037
Identities = 173/202 (85%), Gaps = 6/202 (2%)
Strand = Plus / Minus
Query: 500 gacttggtagggtcggtgcacatgagcaccacgggcttgtcgccgg---cggcgggcttg 556
|||||||||||||||||||||||||| || ||||||||| ||||| |||| ||||||
Sbjct: 813 gacttggtagggtcggtgcacatgaggacgacgggcttggcgccgtgcccggccggcttg 754
Query: 557 aacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccacagc 616
|| || | |||||| || |||||| |||||| || ||||||||||||||||||||||
Sbjct: 753 aagacgcggaagaagacggcggttttctcctccaggccggcggaggccagcacccacagc 694
Query: 617 ccgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcg 676
|||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 693 ccgaaca---ccacgccgcccctcacgtccgcgcccttcgcgccgcacagcctctccgcg 637
Query: 677 tcgtaggccagcgccgggtcca 698
|||| | | | |||||||||||
Sbjct: 636 tcgtcgccgaacgccgggtcca 615
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccga 1275
||||||| ||||||||||||||||| ||| |||||||
Sbjct: 92 agaagtctgggcactcccacatcccagtgagcgccga 56
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 728 gacacttcgaagctcacctccacgtcagcctg 759
||||| || |||||||||||||||||||||||
Sbjct: 591 gacacctccaagctcacctccacgtcagcctg 560
>gb|CB656698.1|CB656698 OSJNEc11F14.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11F14 5', mRNA sequence
Length = 651
Score = 182 bits (92), Expect = 5e-043
Identities = 275/336 (81%)
Strand = Plus / Minus
Query: 836 ctcagcgcctccacctcctcgataggccactgcagcagctgcttcccactggggtccagc 895
||||||| ||||| ||||||||| ||||||||||| ||||||||||| || |||||||||
Sbjct: 485 ctcagcgtctccagctcctcgattggccactgcagaagctgcttcccgctcgggtccagc 426
Query: 896 cacaccgtccttggaatcgcctggattccagcccagcctttagccacatcgtcggcggcg 955
|| ||| | ||||| || || ||||| || |||||||| || ||| |||| || | ||
Sbjct: 425 catacctttcttgggatggcatggatgccggcccagcccttcgccttgtcgtaggtgacg 366
Query: 956 gtgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtagaac 1015
||||||||||||||||||| || |||||||||||| |||| |||||||| ||||
Sbjct: 365 ctgtcggactcgttagcccacccaagcaggatgcggcggtgcttcaccgggtcgaagaag 306
Query: 1016 gtcttggacgcgtagaagttgccgtagtcgtagcgcaggcggtgctcgtcgccggcgggg 1075
||||| || |||||||||||||||||||| ||||| || ||||| | |||||| || |||
Sbjct: 305 gtctttgatgcgtagaagttgccgtagtcatagcggagccggtggtagtcgccagcaggg 246
Query: 1076 tcgtccggcacgtaccgctcggccctcgggtggtacgtgcccacggtgtagtagtcgtac 1135
| ||||||||| |||||||| | | | || ||| ||||||| ||||||||||| ||
Sbjct: 245 ttgtccggcacataccgctccgtcaccttgttgtagatgcccaccgtgtagtagtcataa 186
Query: 1136 cgccggaggtcgaggctgttcttgagcacgtgcttg 1171
|| ||| |||||||||||||||||||||| ||||
Sbjct: 185 cgggtgagatcgaggctgttcttgagcacgtacttg 150
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccga 1275
||||||| ||||||||||||||||| ||| |||||||
Sbjct: 94 agaagtctgggcactcccacatcccagtgagcgccga 58
>gb|AU058270.1|AU058270 AU058270 Oryza sativa Nipponbare immature leaf including apical
meristem (under long day condition) Oryza sativa
(japonica cultivar-group) cDNA clone E50295_1A, mRNA
sequence
Length = 467
Score = 176 bits (89), Expect = 3e-041
Identities = 241/291 (82%), Gaps = 3/291 (1%)
Strand = Plus / Minus
Query: 335 gccagcgacgggtagaccctggagaggatgcaggtcttgcccccggctccgaagctctca 394
|||| ||||||||| || || || ||||||||||||||||||||||| ||||||||||||
Sbjct: 301 gccatcgacgggtaaactctcgacaggatgcaggtcttgcccccggcgccgaagctctca 242
Query: 395 acgaccgaccggtcgatcaggcttctcagggatatcttgccgttcgagatgtccgtgtcg 454
|| ||||| ||||| |||| |||||||| ||| ||||| ||| ||||||||| ||||||
Sbjct: 241 accaccgaacggtcaatcaagcttctcaaggagatcttcccggacgagatgtcggtgtcg 182
Query: 455 acaaatcctgcaaatgtcgggcggtacaggttcgggttcagggacgacttggtagggtcg 514
|| || || ||||| || || ||| || | |||| | || || |||||||||||||||
Sbjct: 181 acgaacccggcaaaagttggcttgtagagatccgggctaagagaagacttggtagggtcg 122
Query: 515 gtgcacatgagcaccacgggcttgtcgccg---gcggcgggcttgaacaccctgaagaac 571
||||||||||| || ||||||||| ||||| |||| |||||||| || | ||||||
Sbjct: 121 gtgcacatgaggacgacgggcttggcgccgtgcccggccggcttgaagacgcggaagaag 62
Query: 572 accgcggttctctccttgcggttggcggaggccagcacccacagcccgaac 622
|| |||||| |||||| || ||||||||||||||||||||||||||||
Sbjct: 61 acggcggttttctcctccaggccggcggaggccagcacccacagcccgaac 11
>gb|CB656696.1|CB656696 OSJNEc11F13.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11F13 5', mRNA sequence
Length = 853
Score = 176 bits (89), Expect = 3e-041
Identities = 276/337 (81%), Gaps = 1/337 (0%)
Strand = Plus / Minus
Query: 836 ctcagcgcctccacctcctcgataggccactgcagcagctgcttcccactggggtccagc 895
||||||| ||||| ||||||||| ||||||||||| ||||||||||| || |||||||||
Sbjct: 486 ctcagcgtctccagctcctcgattggccactgcagaagctgcttcccgctcgggtccagc 427
Query: 896 cacaccgtccttggaatcgcctggattccagcccagcctttagccacatcgtcggcggcg 955
|| ||| | ||||| ||||| ||||| || |||||||| || ||| |||| || | ||
Sbjct: 426 catacctttcttgggatcgcatggatgccggcccagcccttcgccttgtcgtaggtgacg 367
Query: 956 gtgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtagaac 1015
||||||||||||||||||| || |||||||||||| |||| |||||||| ||||
Sbjct: 366 ctgtcggactcgttagcccacccaagcaggatgcggcggtgcttcaccgggtcgaagaag 307
Query: 1016 gtcttggacgcgtagaagttgccgtagtcgtagcgcaggcggtgctcgtcgccggcgggg 1075
||||| || |||||||||||||||||||| ||||| || ||||| | |||||| || |||
Sbjct: 306 gtctttgatgcgtagaagttgccgtagtcatagcggagccggtggtagtcgccagcaggg 247
Query: 1076 tcgtccggcacgtaccgctcggccctcgggtggtacgtgccca-cggtgtagtagtcgta 1134
| ||||||||| |||||||| | | | || ||| |||||| | ||||||||||| ||
Sbjct: 246 ttgtccggcacataccgctccgtcaccttgttgtagatgcccatccgtgtagtagtcata 187
Query: 1135 ccgccggaggtcgaggctgttcttgagcacgtgcttg 1171
|| ||| |||||||||||||||||||||| ||||
Sbjct: 186 acgggtgagatcgaggctgttcttgagcacgtacttg 150
Score = 135 bits (68), Expect = 1e-028
Identities = 165/196 (84%), Gaps = 6/196 (3%)
Strand = Plus / Minus
Query: 506 gtagggtcggtgcacatgagcaccacgggcttgtcgccgg---cggcgggcttgaacacc 562
|||||||||||||||||||| || ||||||||| ||||| |||| |||||||| ||
Sbjct: 810 gtagggtcggtgcacatgaggacgacgggcttggcgccgtgcccggccggcttgaagacg 751
Query: 563 ctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccacagcccgaac 622
| |||||| || |||||| |||||| || ||||||||||||||||||||||||||||
Sbjct: 750 cggaagaagacggcggttttctcctccaggccggcggaggccagcacccacagcccgaac 691
Query: 623 ggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcgtcgtag 682
||||||||||| |||||||||||| |||| |||||||||||||||||| ||||| |
Sbjct: 690 a---ccacgccgcccatcacgtccgcgcccttcgcgccgcacagcctctccgtgtcgtcg 634
Query: 683 gccagcgccgggtcca 698
| | |||||||||||
Sbjct: 633 ccgaacgccgggtcca 618
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccga 1275
||||||| ||||||||||||||||| ||| |||||||
Sbjct: 94 agaagtctgggcactcccacatcccagtgagcgccga 58
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 728 gacacttcgaagctcacctccacgtcagcctg 759
||||| || |||||||||||||||||||||||
Sbjct: 594 gacacctccaagctcacctccacgtcagcctg 563
>gb|CB656699.1|CB656699 OSJNEc11F14.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11F14 3', mRNA sequence
Length = 811
Score = 176 bits (89), Expect = 3e-041
Identities = 241/291 (82%), Gaps = 3/291 (1%)
Strand = Plus / Plus
Query: 335 gccagcgacgggtagaccctggagaggatgcaggtcttgcccccggctccgaagctctca 394
|||| ||||||||| || || || ||||||||||||||||||||||| ||||||||||||
Sbjct: 506 gccatcgacgggtaaactctcgacaggatgcaggtcttgcccccggcgccgaagctctca 565
Query: 395 acgaccgaccggtcgatcaggcttctcagggatatcttgccgttcgagatgtccgtgtcg 454
|| ||||| ||||| |||| |||||||| ||| ||||| ||| ||||||||| ||||||
Sbjct: 566 accaccgaacggtcaatcaagcttctcaaggagatcttcccggacgagatgtcggtgtcg 625
Query: 455 acaaatcctgcaaatgtcgggcggtacaggttcgggttcagggacgacttggtagggtcg 514
|| || || ||||| || || ||| || | |||| | || || |||||||||||||||
Sbjct: 626 acgaacccggcaaaagttggcttgtagagatccgggctaagagaagacttggtagggtcg 685
Query: 515 gtgcacatgagcaccacgggcttgtcgccg---gcggcgggcttgaacaccctgaagaac 571
||||||||||| || ||||||||| ||||| |||| |||||||| || | ||||||
Sbjct: 686 gtgcacatgaggacgacgggcttggcgccgtgcccggccggcttgaagacgcggaagaag 745
Query: 572 accgcggttctctccttgcggttggcggaggccagcacccacagcccgaac 622
|| |||||| |||||| || ||||||||||||||||||||||||||||
Sbjct: 746 acggcggttttctcctccaggccggcggaggccagcacccacagcccgaac 796
>gb|CB656756.1|CB656756 OSJNEc11H11.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11H11 5', mRNA sequence
Length = 687
Score = 172 bits (87), Expect = 5e-040
Identities = 273/335 (81%)
Strand = Plus / Minus
Query: 837 tcagcgcctccacctcctcgataggccactgcagcagctgcttcccactggggtccagcc 896
|||||| ||||| ||||||||| ||||||||||| ||||||||||| || ||||||||||
Sbjct: 481 tcagcgtctccagctcctcgattggccactgcagaagctgcttcccgctcgggtccagcc 422
Query: 897 acaccgtccttggaatcgcctggattccagcccagcctttagccacatcgtcggcggcgg 956
| ||| | ||||| ||||| ||||| || |||||||| || ||| |||| || | ||
Sbjct: 421 atacctttcttgggatcgcatggatgccggcccagcccttcgccttgtcgtaggtgacgc 362
Query: 957 tgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtagaacg 1016
||||||||||||||||||| || |||||||||||| |||| |||||||| |||| |
Sbjct: 361 tgtcggactcgttagcccacccaagcaggatgcggcggtgcttcaccgggtcgaagaagg 302
Query: 1017 tcttggacgcgtagaagttgccgtagtcgtagcgcaggcggtgctcgtcgccggcggggt 1076
||| || |||||||||||||||||||| ||||| || ||||| | |||||| || ||||
Sbjct: 301 tctatgatgcgtagaagttgccgtagtcatagcggagccggtggtagtcgccagcagggt 242
Query: 1077 cgtccggcacgtaccgctcggccctcgggtggtacgtgcccacggtgtagtagtcgtacc 1136
||||||||| |||||||| | | | || ||| ||||||| ||||||||||| || |
Sbjct: 241 tgtccggcacataccgctccgtcaccttgttgtagatgcccaccgtgtagtagtcataac 182
Query: 1137 gccggaggtcgaggctgttcttgagcacgtgcttg 1171
| ||| | |||||||||||||||||||| ||||
Sbjct: 181 gggtgagatggaggctgttcttgagcacgtacttg 147
Score = 67.9 bits (34), Expect = 2e-008
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 631 gccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcgtcgt 680
||||||| ||||||| |||| |||| ||||||||||||||||||||||||
Sbjct: 681 gccgcccatcacgtctgcgcccttcgcgccgcacagcctctccgcgtcgt 632
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 728 gacacttcgaagctcacctccacgtcagcctg 759
||||| || |||||||||||||||||||||||
Sbjct: 590 gacacgtccaagctcacctccacgtcagcctg 559
>gb|CB656759.1|CB656759 OSJNEc11H12.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11H12 3', mRNA sequence
Length = 782
Score = 167 bits (84), Expect = 3e-038
Identities = 236/286 (82%), Gaps = 3/286 (1%)
Strand = Plus / Plus
Query: 335 gccagcgacgggtagaccctggagaggatgcaggtcttgcccccggctccgaagctctca 394
|||| ||||||||| || || || ||||||||||||||||||||||| ||||||||||||
Sbjct: 497 gccatcgacgggtaaactctcgacaggatgcaggtcttgcccccggcgccgaagctctca 556
Query: 395 acgaccgaccggtcgatcaggcttctcagggatatcttgccgttcgagatgtccgtgtcg 454
|| ||||| ||||| |||| |||||||| ||| ||||| ||| ||||||||| ||||||
Sbjct: 557 accaccgaacggtcaatcaagcttctcaaggagatcttcccggacgagatgtcggtgtcg 616
Query: 455 acaaatcctgcaaatgtcgggcggtacaggttcgggttcagggacgacttggtagggtcg 514
|| || || ||||| || || ||| || | |||| | || || |||||||||||||||
Sbjct: 617 acgaacccggcaaaagttggcttgtagagatccgggctaagagaagacttggtagggtcg 676
Query: 515 gtgcacatgagcaccacgggcttgtcgccg---gcggcgggcttgaacaccctgaagaac 571
||||||||||| || ||||||||| ||||| |||| |||||||| || | ||||||
Sbjct: 677 gtgcacatgaggacgacgggcttggcgccgtgcccggccggcttgaagacgcggaagaag 736
Query: 572 accgcggttctctccttgcggttggcggaggccagcacccacagcc 617
|| |||||| |||||| || |||||||||||||||||||||||
Sbjct: 737 acggcggttttctcctccaggccggcggaggccagcacccacagcc 782
>gb|CZ553792.1|CZ553792 M0015449 AS_TRIM_TDNA_B1 Oryza sativa (japonica cultivar-group)
genomic clone M0015449, DNA sequence
Length = 493
Score = 165 bits (83), Expect = 1e-037
Identities = 119/131 (90%)
Strand = Plus / Plus
Query: 1667 gccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatg 1726
||||||| ||||||||||||||||||||||| || ||||| ||||||||||||||||||
Sbjct: 23 gccggcttgagcgccacccagttgatgaggtcacgtgacactgagtgcgcccacacgatg 82
Query: 1727 ttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtag 1786
|| ||||| |||||||||||||| ||||| |||||||| | |||||||||||||||||||
Sbjct: 83 ttcccccacacggcgcccttggggttgtactggtagaacagatggtaccaccccttgtag 142
Query: 1787 tacatgggcgc 1797
||||| |||||
Sbjct: 143 tacatcggcgc 153
>gb|CB636196.1|CB636196 OSJNEa01G09.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa01G09 5', mRNA sequence
Length = 516
Score = 161 bits (81), Expect = 2e-036
Identities = 180/213 (84%)
Strand = Plus / Minus
Query: 1667 gccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatg 1726
|||||||| || || | ||||||||||||||| | || |||||||| |||||||||||
Sbjct: 365 gccggctcaagggctatccagttgatgaggtcctgtgataccgagtgagcccacacgata 306
Query: 1727 ttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtag 1786
|||||||| || || |||||||| ||||| |||||||| | |||||||| ||||||||
Sbjct: 305 ttgccccacacagctcccttggggttgtactggtagaataggtggtaccatcccttgtaa 246
Query: 1787 tacatgggcgcgttgggatcattgatccagttcttggggggctggaagtggtaccccgtc 1846
|||| ||| |||| ||||| |||||||||||| | ||||||||||||||||| || |||
Sbjct: 245 tacagtggcccgttcggatcgttgatccagttcatcgggggctggaagtggtatcctgtc 186
Query: 1847 ctgagcagggggttgacgatggacggcggcacc 1879
|||||||||||| |||| ||||| | |||||||
Sbjct: 185 ctgagcagggggctgacaatggaggccggcacc 153
>gb|CB639875.1|CB639875 OSJNEa12F04.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa12F04 5', mRNA sequence
Length = 484
Score = 161 bits (81), Expect = 2e-036
Identities = 180/213 (84%)
Strand = Plus / Minus
Query: 1667 gccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatg 1726
|||||||| || || | ||||||||||||||| | || |||||||| |||||||||||
Sbjct: 365 gccggctcaagggctatccagttgatgaggtcctgtgataccgagtgagcccacacgata 306
Query: 1727 ttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtag 1786
|||||||| || || |||||||| ||||| |||||||| | |||||||| ||||||||
Sbjct: 305 ttgccccacacagctcccttggggttgtactggtagaataggtggtaccatcccttgtaa 246
Query: 1787 tacatgggcgcgttgggatcattgatccagttcttggggggctggaagtggtaccccgtc 1846
|||| ||| |||| ||||| |||||||||||| | ||||||||||||||||| || |||
Sbjct: 245 tacagtggcccgttcggatcgttgatccagttcatcgggggctggaagtggtatcctgtc 186
Query: 1847 ctgagcagggggttgacgatggacggcggcacc 1879
|||||||||||| |||| ||||| | |||||||
Sbjct: 185 ctgagcagggggctgacaatggaggccggcacc 153
>gb|CB640745.1|CB640745 OSJNEa16D10.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa16D10 5', mRNA sequence
Length = 542
Score = 161 bits (81), Expect = 2e-036
Identities = 180/213 (84%)
Strand = Plus / Minus
Query: 1667 gccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatg 1726
|||||||| || || | ||||||||||||||| | || |||||||| |||||||||||
Sbjct: 346 gccggctcaagggctatccagttgatgaggtcctgtgataccgagtgagcccacacgata 287
Query: 1727 ttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtag 1786
|||||||| || || |||||||| ||||| |||||||| | |||||||| ||||||||
Sbjct: 286 ttgccccacacagctcccttggggttgtactggtagaataggtggtaccatcccttgtaa 227
Query: 1787 tacatgggcgcgttgggatcattgatccagttcttggggggctggaagtggtaccccgtc 1846
|||| ||| |||| ||||| |||||||||||| | ||||||||||||||||| || |||
Sbjct: 226 tacagtggcccgttcggatcgttgatccagttcatcgggggctggaagtggtatcctgtc 167
Query: 1847 ctgagcagggggttgacgatggacggcggcacc 1879
|||||||||||| |||| ||||| | |||||||
Sbjct: 166 ctgagcagggggctgacaatggaggccggcacc 134
>gb|CB640790.1|CB640790 OSJNEa16G19.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa16G19 5', mRNA sequence
Length = 626
Score = 161 bits (81), Expect = 2e-036
Identities = 180/213 (84%)
Strand = Plus / Minus
Query: 1667 gccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatg 1726
|||||||| || || | ||||||||||||||| | || |||||||| |||||||||||
Sbjct: 346 gccggctcaagggctatccagttgatgaggtcctgtgataccgagtgagcccacacgata 287
Query: 1727 ttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtag 1786
|||||||| || || |||||||| ||||| |||||||| | |||||||| ||||||||
Sbjct: 286 ttgccccacacagctcccttggggttgtactggtagaataggtggtaccatcccttgtaa 227
Query: 1787 tacatgggcgcgttgggatcattgatccagttcttggggggctggaagtggtaccccgtc 1846
|||| ||| |||| ||||| |||||||||||| | ||||||||||||||||| || |||
Sbjct: 226 tacagtggcccgttcggatcgttgatccagttcatcgggggctggaagtggtatcctgtc 167
Query: 1847 ctgagcagggggttgacgatggacggcggcacc 1879
|||||||||||| |||| ||||| | |||||||
Sbjct: 166 ctgagcagggggctgacaatggaggccggcacc 134
>gb|CB659515.1|CB659515 OSJNEc16J09.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc16J09 5', mRNA sequence
Length = 797
Score = 161 bits (81), Expect = 2e-036
Identities = 180/213 (84%)
Strand = Plus / Minus
Query: 1667 gccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatg 1726
|||||||| || || | ||||||||||||||| | || |||||||| |||||||||||
Sbjct: 374 gccggctcaagggctatccagttgatgaggtcctgtgataccgagtgagcccacacgata 315
Query: 1727 ttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtag 1786
|||||||| || || |||||||| ||||| |||||||| | |||||||| ||||||||
Sbjct: 314 ttgccccacacagctcccttggggttgtactggtagaataggtggtaccatcccttgtaa 255
Query: 1787 tacatgggcgcgttgggatcattgatccagttcttggggggctggaagtggtaccccgtc 1846
|||| ||| |||| ||||| |||||||||||| | ||||||||||||||||| || |||
Sbjct: 254 tacagtggcccgttcggatcgttgatccagttcatcgggggctggaagtggtatcctgtc 195
Query: 1847 ctgagcagggggttgacgatggacggcggcacc 1879
|||||||||||| |||| ||||| | |||||||
Sbjct: 194 ctgagcagggggctgacaatggaggccggcacc 162
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccga 1275
||||||| ||||||||||||||||| ||| |||||||
Sbjct: 787 agaagtctgggcactcccacatcccagtgagcgccga 751
>gb|CB662770.1|CB662770 OSJNEd07B16.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd07B16 5', mRNA sequence
Length = 850
Score = 161 bits (81), Expect = 2e-036
Identities = 172/201 (85%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 501 acttggtagggtcggtgcacatgagcaccacgggcttgtcgccgg---cggcgggcttga 557
||||||||||||||||||||||||| || ||||||||| ||||| |||| |||||||
Sbjct: 441 acttggtagggtcggtgcacatgaggacgacgggcttggcgccgtgcccggccggcttga 382
Query: 558 acaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccacagcc 617
| || | |||||| || |||||| |||||| || |||||||||||||||||||||||
Sbjct: 381 agacgcggaagaagacggcggttttctcctccaggccggcggaggccagcacccacagcc 322
Query: 618 cgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcgt 677
||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 321 cgaaca---ccacgccgcccctcacgtccgcgcccttcgcgccgcacagcctctccgcgt 265
Query: 678 cgtaggccagcgccgggtcca 698
||| | | | |||||||||||
Sbjct: 264 cgtcgccgaacgccgggtcca 244
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 728 gacacttcgaagctcacctccacgtcagcctg 759
||||| || |||||||||||||||||||||||
Sbjct: 220 gacacctccaagctcacctccacgtcagcctg 189
>dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1112_G07
Length = 149119
Score = 161 bits (81), Expect = 2e-036
Identities = 172/201 (85%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 501 acttggtagggtcggtgcacatgagcaccacgggcttgtcgccgg---cggcgggcttga 557
||||||||||||||||||||||||| || ||||||||| ||||| |||| |||||||
Sbjct: 14090 acttggtagggtcggtgcacatgaggacgacgggcttggcgccgtgcccggccggcttga 14031
Query: 558 acaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccacagcc 617
| || | |||||| || |||||| |||||| || |||||||||||||||||||||||
Sbjct: 14030 agacgcggaagaagacggcggttttctcctccaggccggcggaggccagcacccacagcc 13971
Query: 618 cgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcgt 677
||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 13970 cgaaca---ccacgccgcccctcacgtccgcgcccttcgcgccgcacagcctctccgcgt 13914
Query: 678 cgtaggccagcgccgggtcca 698
||| | | | |||||||||||
Sbjct: 13913 cgtcgccgaacgccgggtcca 13893
Score = 125 bits (63), Expect = 1e-025
Identities = 177/215 (82%)
Strand = Plus / Minus
Query: 957 tgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtagaacg 1016
||||||||||||||||||| || |||||||||||| |||| |||||||| |||| |
Sbjct: 13061 tgtcggactcgttagcccacccaagcaggatgcggcggtgcttcaccgggtcgaagaagg 13002
Query: 1017 tcttggacgcgtagaagttgccgtagtcgtagcgcaggcggtgctcgtcgccggcggggt 1076
|||| || |||||||||||||||||||| ||||| || ||||| | |||||| || ||||
Sbjct: 13001 tctttgatgcgtagaagttgccgtagtcatagcggagccggtggtagtcgccagcagggt 12942
Query: 1077 cgtccggcacgtaccgctcggccctcgggtggtacgtgcccacggtgtagtagtcgtacc 1136
||||||||| |||||||| | | | || ||| ||||||| ||||||||||| || |
Sbjct: 12941 tgtccggcacataccgctccgtcaccttgttgtagatgcccaccgtgtagtagtcataac 12882
Query: 1137 gccggaggtcgaggctgttcttgagcacgtgcttg 1171
| ||| |||||||||||||||||||||| ||||
Sbjct: 12881 gggtgagatcgaggctgttcttgagcacgtacttg 12847
Score = 87.7 bits (44), Expect = 2e-014
Identities = 104/124 (83%)
Strand = Plus / Minus
Query: 1667 gccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatg 1726
|||||||| || || | ||||||||||||||| | || |||||||| |||||||||||
Sbjct: 12378 gccggctcaagggctatccagttgatgaggtcctgtgataccgagtgagcccacacgata 12319
Query: 1727 ttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtag 1786
|||||||| || || |||||||| ||||| |||||||| | |||||||| ||||||||
Sbjct: 12318 ttgccccacacagctcccttggggttgtactggtagaataggtggtaccatcccttgtaa 12259
Query: 1787 taca 1790
||||
Sbjct: 12258 taca 12255
Score = 85.7 bits (43), Expect = 9e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 836 ctcagcgcctccacctcctcgataggccactgcagcagctgcttcccactggggtccagc 895
||||||| ||||| ||||||||| ||||||||||| ||||||||||| || |||||||||
Sbjct: 13362 ctcagcgtctccagctcctcgattggccactgcagaagctgcttcccgctcgggtccagc 13303
Query: 896 cacaccgtccttggaatcgcctg 918
|| ||| | ||||| ||||||||
Sbjct: 13302 catacctttcttgggatcgcctg 13280
Score = 83.8 bits (42), Expect = 3e-013
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 335 gccagcgacgggtagaccctggagaggatgcaggtcttgcccccggctccgaagctctca 394
|||| ||||||||| || || || ||||||||||||||||||||||| ||||||||||||
Sbjct: 14693 gccatcgacgggtaaactctcgacaggatgcaggtcttgcccccggcgccgaagctctca 14634
Query: 395 acgaccgaccggtc 408
|| ||||| |||||
Sbjct: 14633 accaccgaacggtc 14620
Score = 79.8 bits (40), Expect = 5e-012
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 1808 ttgatccagttcttggggggctggaagtggtaccccgtcctgagcagggggttgacgatg 1867
|||||||||||| | ||||||||||||||||| || ||||||||||||||| |||| |||
Sbjct: 10734 ttgatccagttcatcgggggctggaagtggtatcctgtcctgagcagggggctgacaatg 10675
Query: 1868 gacggcggcacc 1879
|| | |||||||
Sbjct: 10674 gaggccggcacc 10663
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccga 1275
||||||| ||||||||||||||||| ||| |||||||
Sbjct: 12791 agaagtctgggcactcccacatcccagtgagcgccga 12755
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 728 gacacttcgaagctcacctccacgtcagcctg 759
||||| || |||||||||||||||||||||||
Sbjct: 13869 gacacctccaagctcacctccacgtcagcctg 13838
>dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:B1136H02
Length = 145086
Score = 161 bits (81), Expect = 2e-036
Identities = 172/201 (85%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 501 acttggtagggtcggtgcacatgagcaccacgggcttgtcgccgg---cggcgggcttga 557
||||||||||||||||||||||||| || ||||||||| ||||| |||| |||||||
Sbjct: 62297 acttggtagggtcggtgcacatgaggacgacgggcttggcgccgtgcccggccggcttga 62238
Query: 558 acaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccacagcc 617
| || | |||||| || |||||| |||||| || |||||||||||||||||||||||
Sbjct: 62237 agacgcggaagaagacggcggttttctcctccaggccggcggaggccagcacccacagcc 62178
Query: 618 cgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcgt 677
||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 62177 cgaaca---ccacgccgcccctcacgtccgcgcccttcgcgccgcacagcctctccgcgt 62121
Query: 678 cgtaggccagcgccgggtcca 698
||| | | | |||||||||||
Sbjct: 62120 cgtcgccgaacgccgggtcca 62100
Score = 125 bits (63), Expect = 1e-025
Identities = 177/215 (82%)
Strand = Plus / Minus
Query: 957 tgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtagaacg 1016
||||||||||||||||||| || |||||||||||| |||| |||||||| |||| |
Sbjct: 61268 tgtcggactcgttagcccacccaagcaggatgcggcggtgcttcaccgggtcgaagaagg 61209
Query: 1017 tcttggacgcgtagaagttgccgtagtcgtagcgcaggcggtgctcgtcgccggcggggt 1076
|||| || |||||||||||||||||||| ||||| || ||||| | |||||| || ||||
Sbjct: 61208 tctttgatgcgtagaagttgccgtagtcatagcggagccggtggtagtcgccagcagggt 61149
Query: 1077 cgtccggcacgtaccgctcggccctcgggtggtacgtgcccacggtgtagtagtcgtacc 1136
||||||||| |||||||| | | | || ||| ||||||| ||||||||||| || |
Sbjct: 61148 tgtccggcacataccgctccgtcaccttgttgtagatgcccaccgtgtagtagtcataac 61089
Query: 1137 gccggaggtcgaggctgttcttgagcacgtgcttg 1171
| ||| |||||||||||||||||||||| ||||
Sbjct: 61088 gggtgagatcgaggctgttcttgagcacgtacttg 61054
Score = 87.7 bits (44), Expect = 2e-014
Identities = 104/124 (83%)
Strand = Plus / Minus
Query: 1667 gccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatg 1726
|||||||| || || | ||||||||||||||| | || |||||||| |||||||||||
Sbjct: 60585 gccggctcaagggctatccagttgatgaggtcctgtgataccgagtgagcccacacgata 60526
Query: 1727 ttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtag 1786
|||||||| || || |||||||| ||||| |||||||| | |||||||| ||||||||
Sbjct: 60525 ttgccccacacagctcccttggggttgtactggtagaataggtggtaccatcccttgtaa 60466
Query: 1787 taca 1790
||||
Sbjct: 60465 taca 60462
Score = 85.7 bits (43), Expect = 9e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 836 ctcagcgcctccacctcctcgataggccactgcagcagctgcttcccactggggtccagc 895
||||||| ||||| ||||||||| ||||||||||| ||||||||||| || |||||||||
Sbjct: 61569 ctcagcgtctccagctcctcgattggccactgcagaagctgcttcccgctcgggtccagc 61510
Query: 896 cacaccgtccttggaatcgcctg 918
|| ||| | ||||| ||||||||
Sbjct: 61509 catacctttcttgggatcgcctg 61487
Score = 83.8 bits (42), Expect = 3e-013
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 335 gccagcgacgggtagaccctggagaggatgcaggtcttgcccccggctccgaagctctca 394
|||| ||||||||| || || || ||||||||||||||||||||||| ||||||||||||
Sbjct: 62900 gccatcgacgggtaaactctcgacaggatgcaggtcttgcccccggcgccgaagctctca 62841
Query: 395 acgaccgaccggtc 408
|| ||||| |||||
Sbjct: 62840 accaccgaacggtc 62827
Score = 79.8 bits (40), Expect = 5e-012
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 1808 ttgatccagttcttggggggctggaagtggtaccccgtcctgagcagggggttgacgatg 1867
|||||||||||| | ||||||||||||||||| || ||||||||||||||| |||| |||
Sbjct: 58941 ttgatccagttcatcgggggctggaagtggtatcctgtcctgagcagggggctgacaatg 58882
Query: 1868 gacggcggcacc 1879
|| | |||||||
Sbjct: 58881 gaggccggcacc 58870
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccga 1275
||||||| ||||||||||||||||| ||| |||||||
Sbjct: 60998 agaagtctgggcactcccacatcccagtgagcgccga 60962
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 728 gacacttcgaagctcacctccacgtcagcctg 759
||||| || |||||||||||||||||||||||
Sbjct: 62076 gacacctccaagctcacctccacgtcagcctg 62045
>gb|AACV01004580.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg004580, whole
genome shotgun sequence
Length = 8396
Score = 161 bits (81), Expect = 2e-036
Identities = 172/201 (85%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 501 acttggtagggtcggtgcacatgagcaccacgggcttgtcgccgg---cggcgggcttga 557
||||||||||||||||||||||||| || ||||||||| ||||| |||| |||||||
Sbjct: 3152 acttggtagggtcggtgcacatgaggacgacgggcttggcgccgtgcccggccggcttga 3093
Query: 558 acaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccacagcc 617
| || | |||||| || |||||| |||||| || |||||||||||||||||||||||
Sbjct: 3092 agacgcggaagaagacggcggttttctcctccaggccggcggaggccagcacccacagcc 3033
Query: 618 cgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcgt 677
||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 3032 cgaaca---ccacgccgcccctcacgtccgcgcccttcgcgccgcacagcctctccgcgt 2976
Query: 678 cgtaggccagcgccgggtcca 698
||| | | | |||||||||||
Sbjct: 2975 cgtcgccgaacgccgggtcca 2955
Score = 125 bits (63), Expect = 1e-025
Identities = 177/215 (82%)
Strand = Plus / Minus
Query: 957 tgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtagaacg 1016
||||||||||||||||||| || |||||||||||| |||| |||||||| |||| |
Sbjct: 2123 tgtcggactcgttagcccacccaagcaggatgcggcggtgcttcaccgggtcgaagaagg 2064
Query: 1017 tcttggacgcgtagaagttgccgtagtcgtagcgcaggcggtgctcgtcgccggcggggt 1076
|||| || |||||||||||||||||||| ||||| || ||||| | |||||| || ||||
Sbjct: 2063 tctttgatgcgtagaagttgccgtagtcatagcggagccggtggtagtcgccagcagggt 2004
Query: 1077 cgtccggcacgtaccgctcggccctcgggtggtacgtgcccacggtgtagtagtcgtacc 1136
||||||||| |||||||| | | | || ||| ||||||| ||||||||||| || |
Sbjct: 2003 tgtccggcacataccgctccgtcaccttgttgtagatgcccaccgtgtagtagtcataac 1944
Query: 1137 gccggaggtcgaggctgttcttgagcacgtgcttg 1171
| ||| |||||||||||||||||||||| ||||
Sbjct: 1943 gggtgagatcgaggctgttcttgagcacgtacttg 1909
Score = 87.7 bits (44), Expect = 2e-014
Identities = 104/124 (83%)
Strand = Plus / Minus
Query: 1667 gccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatg 1726
|||||||| || || | ||||||||||||||| | || |||||||| |||||||||||
Sbjct: 1440 gccggctcaagggctatccagttgatgaggtcctgtgataccgagtgagcccacacgata 1381
Query: 1727 ttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtag 1786
|||||||| || || |||||||| ||||| |||||||| | |||||||| ||||||||
Sbjct: 1380 ttgccccacacagctcccttggggttgtactggtagaataggtggtaccatcccttgtaa 1321
Query: 1787 taca 1790
||||
Sbjct: 1320 taca 1317
Score = 85.7 bits (43), Expect = 9e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 836 ctcagcgcctccacctcctcgataggccactgcagcagctgcttcccactggggtccagc 895
||||||| ||||| ||||||||| ||||||||||| ||||||||||| || |||||||||
Sbjct: 2424 ctcagcgtctccagctcctcgattggccactgcagaagctgcttcccgctcgggtccagc 2365
Query: 896 cacaccgtccttggaatcgcctg 918
|| ||| | ||||| ||||||||
Sbjct: 2364 catacctttcttgggatcgcctg 2342
Score = 83.8 bits (42), Expect = 3e-013
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 335 gccagcgacgggtagaccctggagaggatgcaggtcttgcccccggctccgaagctctca 394
|||| ||||||||| || || || ||||||||||||||||||||||| ||||||||||||
Sbjct: 3755 gccatcgacgggtaaactctcgacaggatgcaggtcttgcccccggcgccgaagctctca 3696
Query: 395 acgaccgaccggtc 408
|| ||||| |||||
Sbjct: 3695 accaccgaacggtc 3682
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccga 1275
||||||| ||||||||||||||||| ||| |||||||
Sbjct: 1853 agaagtctgggcactcccacatcccagtgagcgccga 1817
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 728 gacacttcgaagctcacctccacgtcagcctg 759
||||| || |||||||||||||||||||||||
Sbjct: 2931 gacacctccaagctcacctccacgtcagcctg 2900
>ref|NT_107180.1| Oryza sativa (japonica cultivar-group)
Length = 6019143
Score = 161 bits (81), Expect = 2e-036
Identities = 172/201 (85%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 501 acttggtagggtcggtgcacatgagcaccacgggcttgtcgccgg---cggcgggcttga 557
||||||||||||||||||||||||| || ||||||||| ||||| |||| |||||||
Sbjct: 889781 acttggtagggtcggtgcacatgaggacgacgggcttggcgccgtgcccggccggcttga 889722
Query: 558 acaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccacagcc 617
| || | |||||| || |||||| |||||| || |||||||||||||||||||||||
Sbjct: 889721 agacgcggaagaagacggcggttttctcctccaggccggcggaggccagcacccacagcc 889662
Query: 618 cgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcgt 677
||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 889661 cgaaca---ccacgccgcccctcacgtccgcgcccttcgcgccgcacagcctctccgcgt 889605
Query: 678 cgtaggccagcgccgggtcca 698
||| | | | |||||||||||
Sbjct: 889604 cgtcgccgaacgccgggtcca 889584
Score = 125 bits (63), Expect = 1e-025
Identities = 177/215 (82%)
Strand = Plus / Minus
Query: 957 tgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtagaacg 1016
||||||||||||||||||| || |||||||||||| |||| |||||||| |||| |
Sbjct: 888752 tgtcggactcgttagcccacccaagcaggatgcggcggtgcttcaccgggtcgaagaagg 888693
Query: 1017 tcttggacgcgtagaagttgccgtagtcgtagcgcaggcggtgctcgtcgccggcggggt 1076
|||| || |||||||||||||||||||| ||||| || ||||| | |||||| || ||||
Sbjct: 888692 tctttgatgcgtagaagttgccgtagtcatagcggagccggtggtagtcgccagcagggt 888633
Query: 1077 cgtccggcacgtaccgctcggccctcgggtggtacgtgcccacggtgtagtagtcgtacc 1136
||||||||| |||||||| | | | || ||| ||||||| ||||||||||| || |
Sbjct: 888632 tgtccggcacataccgctccgtcaccttgttgtagatgcccaccgtgtagtagtcataac 888573
Query: 1137 gccggaggtcgaggctgttcttgagcacgtgcttg 1171
| ||| |||||||||||||||||||||| ||||
Sbjct: 888572 gggtgagatcgaggctgttcttgagcacgtacttg 888538
Score = 87.7 bits (44), Expect = 2e-014
Identities = 104/124 (83%)
Strand = Plus / Minus
Query: 1667 gccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatg 1726
|||||||| || || | ||||||||||||||| | || |||||||| |||||||||||
Sbjct: 888069 gccggctcaagggctatccagttgatgaggtcctgtgataccgagtgagcccacacgata 888010
Query: 1727 ttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtag 1786
|||||||| || || |||||||| ||||| |||||||| | |||||||| ||||||||
Sbjct: 888009 ttgccccacacagctcccttggggttgtactggtagaataggtggtaccatcccttgtaa 887950
Query: 1787 taca 1790
||||
Sbjct: 887949 taca 887946
Score = 85.7 bits (43), Expect = 9e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 836 ctcagcgcctccacctcctcgataggccactgcagcagctgcttcccactggggtccagc 895
||||||| ||||| ||||||||| ||||||||||| ||||||||||| || |||||||||
Sbjct: 889053 ctcagcgtctccagctcctcgattggccactgcagaagctgcttcccgctcgggtccagc 888994
Query: 896 cacaccgtccttggaatcgcctg 918
|| ||| | ||||| ||||||||
Sbjct: 888993 catacctttcttgggatcgcctg 888971
Score = 83.8 bits (42), Expect = 3e-013
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 335 gccagcgacgggtagaccctggagaggatgcaggtcttgcccccggctccgaagctctca 394
|||| ||||||||| || || || ||||||||||||||||||||||| ||||||||||||
Sbjct: 890384 gccatcgacgggtaaactctcgacaggatgcaggtcttgcccccggcgccgaagctctca 890325
Query: 395 acgaccgaccggtc 408
|| ||||| |||||
Sbjct: 890324 accaccgaacggtc 890311
Score = 79.8 bits (40), Expect = 5e-012
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 1808 ttgatccagttcttggggggctggaagtggtaccccgtcctgagcagggggttgacgatg 1867
|||||||||||| | ||||||||||||||||| || ||||||||||||||| |||| |||
Sbjct: 886425 ttgatccagttcatcgggggctggaagtggtatcctgtcctgagcagggggctgacaatg 886366
Query: 1868 gacggcggcacc 1879
|| | |||||||
Sbjct: 886365 gaggccggcacc 886354
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccga 1275
||||||| ||||||||||||||||| ||| |||||||
Sbjct: 888482 agaagtctgggcactcccacatcccagtgagcgccga 888446
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 728 gacacttcgaagctcacctccacgtcagcctg 759
||||| || |||||||||||||||||||||||
Sbjct: 889560 gacacctccaagctcacctccacgtcagcctg 889529
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 161 bits (81), Expect = 2e-036
Identities = 172/201 (85%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 501 acttggtagggtcggtgcacatgagcaccacgggcttgtcgccgg---cggcgggcttga 557
||||||||||||||||||||||||| || ||||||||| ||||| |||| |||||||
Sbjct: 6098868 acttggtagggtcggtgcacatgaggacgacgggcttggcgccgtgcccggccggcttga 6098809
Query: 558 acaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccacagcc 617
| || | |||||| || |||||| |||||| || |||||||||||||||||||||||
Sbjct: 6098808 agacgcggaagaagacggcggttttctcctccaggccggcggaggccagcacccacagcc 6098749
Query: 618 cgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcgt 677
||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 6098748 cgaaca---ccacgccgcccctcacgtccgcgcccttcgcgccgcacagcctctccgcgt 6098692
Query: 678 cgtaggccagcgccgggtcca 698
||| | | | |||||||||||
Sbjct: 6098691 cgtcgccgaacgccgggtcca 6098671
Score = 125 bits (63), Expect = 1e-025
Identities = 177/215 (82%)
Strand = Plus / Minus
Query: 957 tgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtagaacg 1016
||||||||||||||||||| || |||||||||||| |||| |||||||| |||| |
Sbjct: 6097839 tgtcggactcgttagcccacccaagcaggatgcggcggtgcttcaccgggtcgaagaagg 6097780
Query: 1017 tcttggacgcgtagaagttgccgtagtcgtagcgcaggcggtgctcgtcgccggcggggt 1076
|||| || |||||||||||||||||||| ||||| || ||||| | |||||| || ||||
Sbjct: 6097779 tctttgatgcgtagaagttgccgtagtcatagcggagccggtggtagtcgccagcagggt 6097720
Query: 1077 cgtccggcacgtaccgctcggccctcgggtggtacgtgcccacggtgtagtagtcgtacc 1136
||||||||| |||||||| | | | || ||| ||||||| ||||||||||| || |
Sbjct: 6097719 tgtccggcacataccgctccgtcaccttgttgtagatgcccaccgtgtagtagtcataac 6097660
Query: 1137 gccggaggtcgaggctgttcttgagcacgtgcttg 1171
| ||| |||||||||||||||||||||| ||||
Sbjct: 6097659 gggtgagatcgaggctgttcttgagcacgtacttg 6097625
Score = 87.7 bits (44), Expect = 2e-014
Identities = 104/124 (83%)
Strand = Plus / Minus
Query: 1667 gccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatg 1726
|||||||| || || | ||||||||||||||| | || |||||||| |||||||||||
Sbjct: 6097156 gccggctcaagggctatccagttgatgaggtcctgtgataccgagtgagcccacacgata 6097097
Query: 1727 ttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtag 1786
|||||||| || || |||||||| ||||| |||||||| | |||||||| ||||||||
Sbjct: 6097096 ttgccccacacagctcccttggggttgtactggtagaataggtggtaccatcccttgtaa 6097037
Query: 1787 taca 1790
||||
Sbjct: 6097036 taca 6097033
Score = 85.7 bits (43), Expect = 9e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 836 ctcagcgcctccacctcctcgataggccactgcagcagctgcttcccactggggtccagc 895
||||||| ||||| ||||||||| ||||||||||| ||||||||||| || |||||||||
Sbjct: 6098140 ctcagcgtctccagctcctcgattggccactgcagaagctgcttcccgctcgggtccagc 6098081
Query: 896 cacaccgtccttggaatcgcctg 918
|| ||| | ||||| ||||||||
Sbjct: 6098080 catacctttcttgggatcgcctg 6098058
Score = 83.8 bits (42), Expect = 3e-013
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 335 gccagcgacgggtagaccctggagaggatgcaggtcttgcccccggctccgaagctctca 394
|||| ||||||||| || || || ||||||||||||||||||||||| ||||||||||||
Sbjct: 6099471 gccatcgacgggtaaactctcgacaggatgcaggtcttgcccccggcgccgaagctctca 6099412
Query: 395 acgaccgaccggtc 408
|| ||||| |||||
Sbjct: 6099411 accaccgaacggtc 6099398
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccga 1275
||||||| ||||||||||||||||| ||| |||||||
Sbjct: 6097569 agaagtctgggcactcccacatcccagtgagcgccga 6097533
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 728 gacacttcgaagctcacctccacgtcagcctg 759
||||| || |||||||||||||||||||||||
Sbjct: 6098647 gacacctccaagctcacctccacgtcagcctg 6098616
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 161 bits (81), Expect = 2e-036
Identities = 172/201 (85%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 501 acttggtagggtcggtgcacatgagcaccacgggcttgtcgccgg---cggcgggcttga 557
||||||||||||||||||||||||| || ||||||||| ||||| |||| |||||||
Sbjct: 19551932 acttggtagggtcggtgcacatgaggacgacgggcttggcgccgtgcccggccggcttga 19551873
Query: 558 acaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccacagcc 617
| || | |||||| || |||||| |||||| || |||||||||||||||||||||||
Sbjct: 19551872 agacgcggaagaagacggcggttttctcctccaggccggcggaggccagcacccacagcc 19551813
Query: 618 cgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcgt 677
||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 19551812 cgaaca---ccacgccgcccctcacgtccgcgcccttcgcgccgcacagcctctccgcgt 19551756
Query: 678 cgtaggccagcgccgggtcca 698
||| | | | |||||||||||
Sbjct: 19551755 cgtcgccgaacgccgggtcca 19551735
Score = 125 bits (63), Expect = 1e-025
Identities = 177/215 (82%)
Strand = Plus / Minus
Query: 957 tgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtagaacg 1016
||||||||||||||||||| || |||||||||||| |||| |||||||| |||| |
Sbjct: 19550903 tgtcggactcgttagcccacccaagcaggatgcggcggtgcttcaccgggtcgaagaagg 19550844
Query: 1017 tcttggacgcgtagaagttgccgtagtcgtagcgcaggcggtgctcgtcgccggcggggt 1076
|||| || |||||||||||||||||||| ||||| || ||||| | |||||| || ||||
Sbjct: 19550843 tctttgatgcgtagaagttgccgtagtcatagcggagccggtggtagtcgccagcagggt 19550784
Query: 1077 cgtccggcacgtaccgctcggccctcgggtggtacgtgcccacggtgtagtagtcgtacc 1136
||||||||| |||||||| | | | || ||| ||||||| ||||||||||| || |
Sbjct: 19550783 tgtccggcacataccgctccgtcaccttgttgtagatgcccaccgtgtagtagtcataac 19550724
Query: 1137 gccggaggtcgaggctgttcttgagcacgtgcttg 1171
| ||| |||||||||||||||||||||| ||||
Sbjct: 19550723 gggtgagatcgaggctgttcttgagcacgtacttg 19550689
Score = 87.7 bits (44), Expect = 2e-014
Identities = 104/124 (83%)
Strand = Plus / Minus
Query: 1667 gccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatg 1726
|||||||| || || | ||||||||||||||| | || |||||||| |||||||||||
Sbjct: 19550220 gccggctcaagggctatccagttgatgaggtcctgtgataccgagtgagcccacacgata 19550161
Query: 1727 ttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtag 1786
|||||||| || || |||||||| ||||| |||||||| | |||||||| ||||||||
Sbjct: 19550160 ttgccccacacagctcccttggggttgtactggtagaataggtggtaccatcccttgtaa 19550101
Query: 1787 taca 1790
||||
Sbjct: 19550100 taca 19550097
Score = 85.7 bits (43), Expect = 9e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 836 ctcagcgcctccacctcctcgataggccactgcagcagctgcttcccactggggtccagc 895
||||||| ||||| ||||||||| ||||||||||| ||||||||||| || |||||||||
Sbjct: 19551204 ctcagcgtctccagctcctcgattggccactgcagaagctgcttcccgctcgggtccagc 19551145
Query: 896 cacaccgtccttggaatcgcctg 918
|| ||| | ||||| ||||||||
Sbjct: 19551144 catacctttcttgggatcgcctg 19551122
Score = 83.8 bits (42), Expect = 3e-013
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 335 gccagcgacgggtagaccctggagaggatgcaggtcttgcccccggctccgaagctctca 394
|||| ||||||||| || || || ||||||||||||||||||||||| ||||||||||||
Sbjct: 19552535 gccatcgacgggtaaactctcgacaggatgcaggtcttgcccccggcgccgaagctctca 19552476
Query: 395 acgaccgaccggtc 408
|| ||||| |||||
Sbjct: 19552475 accaccgaacggtc 19552462
Score = 71.9 bits (36), Expect = 1e-009
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 972 cccagccccacaggatgcggcgccgcttggccgggtcgtagaacgtcttggacgcgtaga 1031
|||| ||||| |||| |||||| ||||||||||| |||||||| |||||||| || ||||
Sbjct: 329202 cccaaccccagaggacgcggcggcgcttggccggatcgtagaaggtcttggaggcataga 329143
Query: 1032 agttgccgtagtcgtagcgcaggc 1055
| ||||| |||||||||| ||||
Sbjct: 329142 acttgccccagtcgtagcggaggc 329119
Score = 52.0 bits (26), Expect = 0.001
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1231 caccgggtagaagtcagggcactcccacatccccgtgg 1268
||||||||||||||| ||||||||||||||||||||
Sbjct: 328943 caccgggtagaagtcgatgcactcccacatccccgtgg 328906
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccga 1275
||||||| ||||||||||||||||| ||| |||||||
Sbjct: 19550633 agaagtctgggcactcccacatcccagtgagcgccga 19550597
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 728 gacacttcgaagctcacctccacgtcagcctg 759
||||| || |||||||||||||||||||||||
Sbjct: 19551711 gacacctccaagctcacctccacgtcagcctg 19551680
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 161 bits (81), Expect = 2e-036
Identities = 172/201 (85%), Gaps = 6/201 (2%)
Strand = Plus / Minus
Query: 501 acttggtagggtcggtgcacatgagcaccacgggcttgtcgccgg---cggcgggcttga 557
||||||||||||||||||||||||| || ||||||||| ||||| |||| |||||||
Sbjct: 19705539 acttggtagggtcggtgcacatgaggacgacgggcttggcgccgtgcccggccggcttga 19705480
Query: 558 acaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcacccacagcc 617
| || | |||||| || |||||| |||||| || |||||||||||||||||||||||
Sbjct: 19705479 agacgcggaagaagacggcggttttctcctccaggccggcggaggccagcacccacagcc 19705420
Query: 618 cgaacggccccacgccgcccctcacgtccgcgcgcttcacgccgcacagcctctccgcgt 677
||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 19705419 cgaaca---ccacgccgcccctcacgtccgcgcccttcgcgccgcacagcctctccgcgt 19705363
Query: 678 cgtaggccagcgccgggtcca 698
||| | | | |||||||||||
Sbjct: 19705362 cgtcgccgaacgccgggtcca 19705342
Score = 125 bits (63), Expect = 1e-025
Identities = 177/215 (82%)
Strand = Plus / Minus
Query: 957 tgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtagaacg 1016
||||||||||||||||||| || |||||||||||| |||| |||||||| |||| |
Sbjct: 19704510 tgtcggactcgttagcccacccaagcaggatgcggcggtgcttcaccgggtcgaagaagg 19704451
Query: 1017 tcttggacgcgtagaagttgccgtagtcgtagcgcaggcggtgctcgtcgccggcggggt 1076
|||| || |||||||||||||||||||| ||||| || ||||| | |||||| || ||||
Sbjct: 19704450 tctttgatgcgtagaagttgccgtagtcatagcggagccggtggtagtcgccagcagggt 19704391
Query: 1077 cgtccggcacgtaccgctcggccctcgggtggtacgtgcccacggtgtagtagtcgtacc 1136
||||||||| |||||||| | | | || ||| ||||||| ||||||||||| || |
Sbjct: 19704390 tgtccggcacataccgctccgtcaccttgttgtagatgcccaccgtgtagtagtcataac 19704331
Query: 1137 gccggaggtcgaggctgttcttgagcacgtgcttg 1171
| ||| |||||||||||||||||||||| ||||
Sbjct: 19704330 gggtgagatcgaggctgttcttgagcacgtacttg 19704296
Score = 87.7 bits (44), Expect = 2e-014
Identities = 104/124 (83%)
Strand = Plus / Minus
Query: 1667 gccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatg 1726
|||||||| || || | ||||||||||||||| | || |||||||| |||||||||||
Sbjct: 19703827 gccggctcaagggctatccagttgatgaggtcctgtgataccgagtgagcccacacgata 19703768
Query: 1727 ttgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtag 1786
|||||||| || || |||||||| ||||| |||||||| | |||||||| ||||||||
Sbjct: 19703767 ttgccccacacagctcccttggggttgtactggtagaataggtggtaccatcccttgtaa 19703708
Query: 1787 taca 1790
||||
Sbjct: 19703707 taca 19703704
Score = 85.7 bits (43), Expect = 9e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 836 ctcagcgcctccacctcctcgataggccactgcagcagctgcttcccactggggtccagc 895
||||||| ||||| ||||||||| ||||||||||| ||||||||||| || |||||||||
Sbjct: 19704811 ctcagcgtctccagctcctcgattggccactgcagaagctgcttcccgctcgggtccagc 19704752
Query: 896 cacaccgtccttggaatcgcctg 918
|| ||| | ||||| ||||||||
Sbjct: 19704751 catacctttcttgggatcgcctg 19704729
Score = 83.8 bits (42), Expect = 3e-013
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 335 gccagcgacgggtagaccctggagaggatgcaggtcttgcccccggctccgaagctctca 394
|||| ||||||||| || || || ||||||||||||||||||||||| ||||||||||||
Sbjct: 19706142 gccatcgacgggtaaactctcgacaggatgcaggtcttgcccccggcgccgaagctctca 19706083
Query: 395 acgaccgaccggtc 408
|| ||||| |||||
Sbjct: 19706082 accaccgaacggtc 19706069
Score = 79.8 bits (40), Expect = 5e-012
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 1808 ttgatccagttcttggggggctggaagtggtaccccgtcctgagcagggggttgacgatg 1867
|||||||||||| | ||||||||||||||||| || ||||||||||||||| |||| |||
Sbjct: 19702183 ttgatccagttcatcgggggctggaagtggtatcctgtcctgagcagggggctgacaatg 19702124
Query: 1868 gacggcggcacc 1879
|| | |||||||
Sbjct: 19702123 gaggccggcacc 19702112
Score = 71.9 bits (36), Expect = 1e-009
Identities = 72/84 (85%)
Strand = Plus / Minus
Query: 972 cccagccccacaggatgcggcgccgcttggccgggtcgtagaacgtcttggacgcgtaga 1031
|||| ||||| |||| |||||| ||||||||||| |||||||| |||||||| || ||||
Sbjct: 344771 cccaaccccagaggacgcggcggcgcttggccggatcgtagaaggtcttggaggcataga 344712
Query: 1032 agttgccgtagtcgtagcgcaggc 1055
| ||||| |||||||||| ||||
Sbjct: 344711 acttgccccagtcgtagcggaggc 344688
Score = 52.0 bits (26), Expect = 0.001
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1231 caccgggtagaagtcagggcactcccacatccccgtgg 1268
||||||||||||||| ||||||||||||||||||||
Sbjct: 344512 caccgggtagaagtcgatgcactcccacatccccgtgg 344475
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccga 1275
||||||| ||||||||||||||||| ||| |||||||
Sbjct: 19704240 agaagtctgggcactcccacatcccagtgagcgccga 19704204
Score = 48.1 bits (24), Expect = 0.019
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 728 gacacttcgaagctcacctccacgtcagcctg 759
||||| || |||||||||||||||||||||||
Sbjct: 19705318 gacacctccaagctcacctccacgtcagcctg 19705287
>gb|CB656731.1|CB656731 OSJNEc11G13.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11G13 3', mRNA sequence
Length = 802
Score = 147 bits (74), Expect = 3e-032
Identities = 176/210 (83%)
Strand = Plus / Plus
Query: 335 gccagcgacgggtagaccctggagaggatgcaggtcttgcccccggctccgaagctctca 394
|||| ||||||||| || || || ||||||||||||||||||||||| ||||||||||||
Sbjct: 547 gccatcgacgggtaaactctcgacaggatgcaggtcttgcccccggcgccgaagctctca 606
Query: 395 acgaccgaccggtcgatcaggcttctcagggatatcttgccgttcgagatgtccgtgtcg 454
|| ||||| ||||| |||| |||||||| ||| ||||| ||| ||||||||| ||||||
Sbjct: 607 accaccgaacggtcaatcaagcttctcaaggagatcttcccggacgagatgtcggtgtcg 666
Query: 455 acaaatcctgcaaatgtcgggcggtacaggttcgggttcagggacgacttggtagggtcg 514
|| || || ||||| || || ||| || | |||| | || || |||||||||||||||
Sbjct: 667 acgaacccggcaaaagttggcttgtagagatccgggctaagagaagacttggtagggtcg 726
Query: 515 gtgcacatgagcaccacgggcttgtcgccg 544
||||||||||| || ||||||||| |||||
Sbjct: 727 gtgcacatgaggacgacgggcttggcgccg 756
>gb|CB665440.1|CB665440 OSJNEd11N18.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd11N18 3', mRNA sequence
Length = 771
Score = 147 bits (74), Expect = 3e-032
Identities = 176/210 (83%)
Strand = Plus / Plus
Query: 335 gccagcgacgggtagaccctggagaggatgcaggtcttgcccccggctccgaagctctca 394
|||| ||||||||| || || || ||||||||||||||||||||||| ||||||||||||
Sbjct: 501 gccatcgacgggtaaactctcgacaggatgcaggtcttgcccccggcgccgaagctctca 560
Query: 395 acgaccgaccggtcgatcaggcttctcagggatatcttgccgttcgagatgtccgtgtcg 454
|| ||||| ||||| |||| |||||||| ||| ||||| ||| ||||||||| ||||||
Sbjct: 561 accaccgaacggtcaatcaagcttctcaaggagatcttcccggacgagatgtcggtgtcg 620
Query: 455 acaaatcctgcaaatgtcgggcggtacaggttcgggttcagggacgacttggtagggtcg 514
|| || || ||||| || || ||| || | |||| | || || |||||||||||||||
Sbjct: 621 acgaacccggcaaaagttggcttgtagagatccgggctaagagaagacttggtagggtcg 680
Query: 515 gtgcacatgagcaccacgggcttgtcgccg 544
||||||||||| || ||||||||| |||||
Sbjct: 681 gtgcacatgaggacgacgggcttggcgccg 710
>gb|CB670406.1|CB670406 OSJNEe03H08.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe03H08 3', mRNA sequence
Length = 747
Score = 139 bits (70), Expect = 7e-030
Identities = 175/210 (83%)
Strand = Plus / Plus
Query: 335 gccagcgacgggtagaccctggagaggatgcaggtcttgcccccggctccgaagctctca 394
|||| ||||||||| || || || ||||||||||||||||||||||| ||||||||||||
Sbjct: 468 gccatcgacgggtaaactctcgacaggatgcaggtcttgcccccggcgccgaagctctca 527
Query: 395 acgaccgaccggtcgatcaggcttctcagggatatcttgccgttcgagatgtccgtgtcg 454
|| ||||| ||||| |||| |||||||| ||| ||||| ||| ||||||||| ||||||
Sbjct: 528 accaccgaacggtcaatcaagcttctcaaggagatcttcccggacgagatgtcggtgtcg 587
Query: 455 acaaatcctgcaaatgtcgggcggtacaggttcgggttcagggacgacttggtagggtcg 514
|| || || ||||| || || ||| || | |||| | || || |||||||||||||||
Sbjct: 588 acgaacccggcaaaagttggcttgtagagatccgggctaagagaagacttggtagggtcg 647
Query: 515 gtgcacatgagcaccacgggcttgtcgccg 544
|||||||||| || ||||||||| |||||
Sbjct: 648 gtgcacatgaagacgacgggcttggcgccg 677
>dbj|AK120779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009M11, full
insert sequence
Length = 2289
Score = 139 bits (70), Expect = 7e-030
Identities = 94/102 (92%)
Strand = Plus / Minus
Query: 954 cggtgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtaga 1013
|||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||||
Sbjct: 1097 cggtgtcggactcgttggcccagccccagacgatgcggcggcgcttggccgggtcgtaga 1038
Query: 1014 acgtcttggacgcgtagaagttgccgtagtcgtagcgcaggc 1055
||| |||||| |||||||||| ||||||||||||||| ||||
Sbjct: 1037 acgacttggatgcgtagaagtcgccgtagtcgtagcggaggc 996
Score = 137 bits (69), Expect = 3e-029
Identities = 156/185 (84%)
Strand = Plus / Minus
Query: 1668 ccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatgt 1727
||||||| |||||| ||||| ||| ||||| ||| ||||||||||||||| ||||||
Sbjct: 380 ccggctccagcgccgtccagtcgatcaggtccgtcgaaaccgagtgcgcccactcgatgt 321
Query: 1728 tgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtagt 1787
| ||||| |||||||||||||| ||||| |||||||| | ||||||| | ||||| ||||
Sbjct: 320 tcccccacacggcgcccttggggttgtactggtagaacagatggtacaagcccttatagt 261
Query: 1788 acatgggcgcgttgggatcattgatccagttcttggggggctggaagtggtaccccgtcc 1847
|||| || |||| ||||| |||||||||| |||||| || |||||||||||||| ||||
Sbjct: 260 acatcggaccgttcggatcgttgatccagtgcttgggtggttggaagtggtacccggtcc 201
Query: 1848 tgagc 1852
||||
Sbjct: 200 ggagc 196
Score = 103 bits (52), Expect = 4e-019
Identities = 76/84 (90%)
Strand = Plus / Minus
Query: 553 cttgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcaccca 612
|||||||||||||||||| || || || ||||||||| ||| | ||||||||||| ||||
Sbjct: 1492 cttgaacaccctgaagaagacggccgtcctctccttgaggtcgccggaggccagcgccca 1433
Query: 613 cagcccgaacggccccacgccgcc 636
||||||||||||||||||||||||
Sbjct: 1432 cagcccgaacggccccacgccgcc 1409
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccgagtgcagcgg 1284
||||||| ||||||||||||||||| ||| ||||||||||||||||
Sbjct: 788 agaagtccgggcactcccacatcccggtgtgcgccgagtgcagcgg 743
Score = 50.1 bits (25), Expect = 0.005
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1118 acggtgtagtagtcgtaccgccggaggtcgaggctgttcttgagcacgtgcttgacc 1174
||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 930 acggtgtagtactcgtaccgcgtcaggtcgaggctcaccttgagcacgtacttgacc 874
>gb|AACV01009702.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009702, whole
genome shotgun sequence
Length = 11577
Score = 139 bits (70), Expect = 7e-030
Identities = 94/102 (92%)
Strand = Plus / Plus
Query: 954 cggtgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtaga 1013
|||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||||
Sbjct: 8034 cggtgtcggactcgttggcccagccccagacgatgcggcggcgcttggccgggtcgtaga 8093
Query: 1014 acgtcttggacgcgtagaagttgccgtagtcgtagcgcaggc 1055
||| |||||| |||||||||| ||||||||||||||| ||||
Sbjct: 8094 acgacttggatgcgtagaagtcgccgtagtcgtagcggaggc 8135
Score = 103 bits (52), Expect = 4e-019
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 553 cttgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcaccca 612
|||||||||||||||||| || || || ||||||||| ||| | ||||||||||| ||||
Sbjct: 7455 cttgaacaccctgaagaagacggccgtcctctccttgaggtcgccggaggccagcgccca 7514
Query: 613 cagcccgaacggccccacgccgcc 636
||||||||||||||||||||||||
Sbjct: 7515 cagcccgaacggccccacgccgcc 7538
Score = 95.6 bits (48), Expect = 9e-017
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 1668 ccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatgt 1727
||||||| |||||| ||||| ||| ||||| ||| ||||||||||||||| ||||||
Sbjct: 8751 ccggctccagcgccgtccagtcgatcaggtccgtcgaaaccgagtgcgcccactcgatgt 8810
Query: 1728 tgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtagt 1787
| ||||| |||||||||||||| ||||| |||||||| | ||||||| | ||||| ||||
Sbjct: 8811 tcccccacacggcgcccttggggttgtactggtagaacagatggtacaagcccttatagt 8870
Query: 1788 acat 1791
||||
Sbjct: 8871 acat 8874
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccgagtgcagcgg 1284
||||||| ||||||||||||||||| ||| ||||||||||||||||
Sbjct: 8343 agaagtccgggcactcccacatcccggtgtgcgccgagtgcagcgg 8388
Score = 50.1 bits (25), Expect = 0.005
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 1808 ttgatccagttcttggggggctggaagtggtaccccgtcctgagc 1852
|||||||||| |||||| || |||||||||||||| |||| ||||
Sbjct: 9114 ttgatccagtgcttgggtggttggaagtggtacccggtccggagc 9158
Score = 50.1 bits (25), Expect = 0.005
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 1118 acggtgtagtagtcgtaccgccggaggtcgaggctgttcttgagcacgtgcttgacc 1174
||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 8201 acggtgtagtactcgtaccgcgtcaggtcgaggctcaccttgagcacgtacttgacc 8257
>ref|XM_472408.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1752
Score = 139 bits (70), Expect = 7e-030
Identities = 94/102 (92%)
Strand = Plus / Minus
Query: 954 cggtgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtaga 1013
|||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||||
Sbjct: 1027 cggtgtcggactcgttggcccagccccagacgatgcggcggcgcttggccgggtcgtaga 968
Query: 1014 acgtcttggacgcgtagaagttgccgtagtcgtagcgcaggc 1055
||| |||||| |||||||||| ||||||||||||||| ||||
Sbjct: 967 acgacttggatgcgtagaagtcgccgtagtcgtagcggaggc 926
Score = 103 bits (52), Expect = 4e-019
Identities = 76/84 (90%)
Strand = Plus / Minus
Query: 553 cttgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcaccca 612
|||||||||||||||||| || || || ||||||||| ||| | ||||||||||| ||||
Sbjct: 1422 cttgaacaccctgaagaagacggccgtcctctccttgaggtcgccggaggccagcgccca 1363
Query: 613 cagcccgaacggccccacgccgcc 636
||||||||||||||||||||||||
Sbjct: 1362 cagcccgaacggccccacgccgcc 1339
Score = 95.6 bits (48), Expect = 9e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 1668 ccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatgt 1727
||||||| |||||| ||||| ||| ||||| ||| ||||||||||||||| ||||||
Sbjct: 310 ccggctccagcgccgtccagtcgatcaggtccgtcgaaaccgagtgcgcccactcgatgt 251
Query: 1728 tgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtagt 1787
| ||||| |||||||||||||| ||||| |||||||| | ||||||| | ||||| ||||
Sbjct: 250 tcccccacacggcgcccttggggttgtactggtagaacagatggtacaagcccttatagt 191
Query: 1788 acat 1791
||||
Sbjct: 190 acat 187
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccgagtgcagcgg 1284
||||||| ||||||||||||||||| ||| ||||||||||||||||
Sbjct: 718 agaagtccgggcactcccacatcccggtgtgcgccgagtgcagcgg 673
Score = 50.1 bits (25), Expect = 0.005
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1118 acggtgtagtagtcgtaccgccggaggtcgaggctgttcttgagcacgtgcttgacc 1174
||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 860 acggtgtagtactcgtaccgcgtcaggtcgaggctcaccttgagcacgtacttgacc 804
Score = 50.1 bits (25), Expect = 0.005
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 1808 ttgatccagttcttggggggctggaagtggtaccccgtcctgagc 1852
|||||||||| |||||| || |||||||||||||| |||| ||||
Sbjct: 179 ttgatccagtgcttgggtggttggaagtggtacccggtccggagc 135
>gb|AY578160.1| Oryza sativa (japonica cultivar-group) cell-wall invertase 3 mRNA,
complete cds
Length = 1911
Score = 139 bits (70), Expect = 7e-030
Identities = 94/102 (92%)
Strand = Plus / Minus
Query: 954 cggtgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtaga 1013
|||||||||||||||| ||||||||||| | ||||||||| |||||||||||||||||||
Sbjct: 1063 cggtgtcggactcgttggcccagccccagacgatgcggcggcgcttggccgggtcgtaga 1004
Query: 1014 acgtcttggacgcgtagaagttgccgtagtcgtagcgcaggc 1055
||| |||||| |||||||||| ||||||||||||||| ||||
Sbjct: 1003 acgacttggatgcgtagaagtcgccgtagtcgtagcggaggc 962
Score = 137 bits (69), Expect = 3e-029
Identities = 156/185 (84%)
Strand = Plus / Minus
Query: 1668 ccggctctagcgccacccagttgatgaggtctcgcgacaccgagtgcgcccacacgatgt 1727
||||||| |||||| ||||| ||| ||||| ||| ||||||||||||||| ||||||
Sbjct: 346 ccggctccagcgccgtccagtcgatcaggtccgtcgaaaccgagtgcgcccactcgatgt 287
Query: 1728 tgccccatacggcgcccttgggattgtattggtagaagaaatggtaccaccccttgtagt 1787
| ||||| |||||||||||||| ||||| |||||||| | ||||||| | ||||| ||||
Sbjct: 286 tcccccacacggcgcccttggggttgtactggtagaacagatggtacaagcccttatagt 227
Query: 1788 acatgggcgcgttgggatcattgatccagttcttggggggctggaagtggtaccccgtcc 1847
|||| || |||| ||||| |||||||||| |||||| || |||||||||||||| ||||
Sbjct: 226 acatcggaccgttcggatcgttgatccagtgcttgggtggttggaagtggtacccggtcc 167
Query: 1848 tgagc 1852
||||
Sbjct: 166 ggagc 162
Score = 103 bits (52), Expect = 4e-019
Identities = 76/84 (90%)
Strand = Plus / Minus
Query: 553 cttgaacaccctgaagaacaccgcggttctctccttgcggttggcggaggccagcaccca 612
|||||||||||||||||| || || || ||||||||| ||| | ||||||||||| ||||
Sbjct: 1458 cttgaacaccctgaagaagacggccgtcctctccttgaggtcgccggaggccagcgccca 1399
Query: 613 cagcccgaacggccccacgccgcc 636
||||||||||||||||||||||||
Sbjct: 1398 cagcccgaacggccccacgccgcc 1375
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccgagtgcagcgg 1284
||||||| ||||||||||||||||| ||| ||||||||||||||||
Sbjct: 754 agaagtccgggcactcccacatcccggtgtgcgccgagtgcagcgg 709
Score = 50.1 bits (25), Expect = 0.005
Identities = 49/57 (85%)
Strand = Plus / Minus
Query: 1118 acggtgtagtagtcgtaccgccggaggtcgaggctgttcttgagcacgtgcttgacc 1174
||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||
Sbjct: 896 acggtgtagtactcgtaccgcgtcaggtcgaggctcaccttgagcacgtacttgacc 840
>gb|CB656757.1|CB656757 OSJNEc11H11.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11H11 3', mRNA sequence
Length = 722
Score = 133 bits (67), Expect = 4e-028
Identities = 169/203 (83%)
Strand = Plus / Plus
Query: 342 acgggtagaccctggagaggatgcaggtcttgcccccggctccgaagctctcaacgaccg 401
||||||| || || || ||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 510 acgggtaaactctcgacaggatgcaggtcttgcccccggcgccgaagctctcaaccaccg 569
Query: 402 accggtcgatcaggcttctcagggatatcttgccgttcgagatgtccgtgtcgacaaatc 461
| ||||| |||| |||||||| ||| ||||| ||| ||||||||| |||||||| || |
Sbjct: 570 aacggtcaatcaagcttctcaaggagatcttcccggacgagatgtcggtgtcgactaacc 629
Query: 462 ctgcaaatgtcgggcggtacaggttcgggttcagggacgacttggtagggtcggtgcaca 521
| ||||| || || ||| || | |||| | | || ||||||||||||||||||||||
Sbjct: 630 cggcaaaagttggcttgtagagatccgggctaaaagaagacttggtagggtcggtgcaca 689
Query: 522 tgagcaccacgggcttgtcgccg 544
|||| || ||||||||| |||||
Sbjct: 690 tgaggacgacgggcttggcgccg 712
>gb|CB656697.1|CB656697 OSJNEc11F13.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11F13 3', mRNA sequence
Length = 760
Score = 131 bits (66), Expect = 2e-027
Identities = 209/256 (81%), Gaps = 3/256 (1%)
Strand = Plus / Plus
Query: 335 gccagcgacgggtagaccctggagaggatgcaggtcttgcccccggctccgaagctctca 394
|||| ||||||||| || || || ||||||||||||||||||||||| ||||| ||||||
Sbjct: 504 gccatcgacgggtaaactctcgacaggatgcaggtcttgcccccggcgccgaatctctca 563
Query: 395 acgaccgaccggtcgatcaggcttctcagggatatcttgccgttcgagatgtccgtgtcg 454
|| ||||| ||||| |||| |||||||| ||| ||||| ||| ||||||||| ||||||
Sbjct: 564 accaccgaacggtcaatcaagcttctcaaggagatcttcccggacgagatgtcggtgtcg 623
Query: 455 acaaatcctgcaaatgtcgggcggtacaggttcgggttcagggacgacttggtagggtcg 514
|| || || ||||| || || ||| || | |||| | | || |||||||||||||||
Sbjct: 624 acgaacccggcaaaagttggcttgtagagatccgggctaacagaagacttggtagggtcg 683
Query: 515 gtgcacatgagcaccacgggcttgtcgccg---gcggcgggcttgaacaccctgaagaac 571
|||||||||| || ||||||||| ||||| |||| ||||||||||| | ||||||
Sbjct: 684 gtgcacatgaagacgacgggcttggcgccgtgcccggccggcttgaacacgcggaagaag 743
Query: 572 accgcggttctctcct 587
|| |||||| ||||||
Sbjct: 744 acggcggttttctcct 759
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full
insert sequence
Length = 1517
Score = 125 bits (63), Expect = 1e-025
Identities = 177/215 (82%)
Strand = Plus / Minus
Query: 957 tgtcggactcgttagcccagccccacaggatgcggcgccgcttggccgggtcgtagaacg 1016
||||||||||||||||||| || |||||||||||| |||| |||||||| |||| |
Sbjct: 1368 tgtcggactcgttagcccacccaagcaggatgcggcggtgcttcaccgggtcgaagaagg 1309
Query: 1017 tcttggacgcgtagaagttgccgtagtcgtagcgcaggcggtgctcgtcgccggcggggt 1076
|||| || |||||||||||||||||||| ||||| || ||||| | |||||| || ||||
Sbjct: 1308 tctttgatgcgtagaagttgccgtagtcatagcggagccggtggtagtcgccagcagggt 1249
Query: 1077 cgtccggcacgtaccgctcggccctcgggtggtacgtgcccacggtgtagtagtcgtacc 1136
||||||||| |||||||| | | | || ||| ||||||| ||||||||||| || |
Sbjct: 1248 tgtccggcacataccgctccgtcaccttgttgtagatgcccaccgtgtagtagtcataac 1189
Query: 1137 gccggaggtcgaggctgttcttgagcacgtgcttg 1171
| ||| |||||||||||||||||||||| ||||
Sbjct: 1188 gggtgagatcgaggctgttcttgagcacgtacttg 1154
Score = 50.1 bits (25), Expect = 0.005
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 1239 agaagtcagggcactcccacatccccgtgggcgccga 1275
||||||| ||||||||||||||||| ||| |||||||
Sbjct: 1098 agaagtctgggcactcccacatcccagtgagcgccga 1062
>gb|CB647639.1|CB647639 OSJNEb10K09.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10K09 3', mRNA sequence
Length = 659
Score = 123 bits (62), Expect = 4e-025
Identities = 116/134 (86%)
Strand = Plus / Plus
Query: 335 gccagcgacgggtagaccctggagaggatgcaggtcttgcccccggctccgaagctctca 394
|||| ||||||||| || || || ||||||||||||||||||||||| ||||||||||||
Sbjct: 482 gccatcgacgggtaaactctcgacaggatgcaggtcttgcccccggcgccgaagctctca 541
Query: 395 acgaccgaccggtcgatcaggcttctcagggatatcttgccgttcgagatgtccgtgtcg 454
|| ||||| ||||| |||| |||||||| ||| ||||| ||| ||||||||| ||||||
Sbjct: 542 accaccgaacggtcaatcaagcttctcaaggagatcttcccggacgagatgtcggtgtcg 601
Query: 455 acaaatcctgcaaa 468
||||| || |||||
Sbjct: 602 acaaacccggcaaa 615
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,569,010
Number of Sequences: 438736
Number of extensions: 3569010
Number of successful extensions: 33987
Number of sequences better than 0.5: 149
Number of HSP's better than 0.5 without gapping: 155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 31122
Number of HSP's gapped (non-prelim): 2781
length of query: 2055
length of database: 2,800,419,916
effective HSP length: 22
effective length of query: 2033
effective length of database: 2,790,767,724
effective search space: 5673630782892
effective search space used: 5673630782892
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)