BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493499.2.1
(785 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB653386.1|CB653386 OSJNEc04F22.r OSJNEc Oryza sativa (j... 176 1e-041
dbj|AK064151.1| Oryza sativa (japonica cultivar-group) cDNA... 176 1e-041
dbj|AP004382.2| Oryza sativa (japonica cultivar-group) geno... 176 1e-041
gb|AACV01015538.1| Oryza sativa (japonica cultivar-group) c... 176 1e-041
ref|XM_477223.1| Oryza sativa (japonica cultivar-group), mRNA 176 1e-041
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 176 1e-041
gb|CH401221.1| Oryza sativa (japonica cultivar-group) chrom... 176 1e-041
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 176 1e-041
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 176 1e-041
dbj|AP003754.5| Oryza sativa (japonica cultivar-group) geno... 143 2e-031
gb|AACV01015542.1| Oryza sativa (japonica cultivar-group) c... 143 2e-031
gb|AC119147.3| Genomic sequence for Oryza sativa, Nipponbar... 62 5e-007
gb|AACV01021222.1| Oryza sativa (japonica cultivar-group) c... 62 5e-007
ref|NM_195769.1| Oryza sativa (japonica cultivar-group) put... 62 5e-007
ref|NT_080064.1| Oryza sativa (japonica cultivar-group) chr... 62 5e-007
gb|CH401251.1| Oryza sativa (japonica cultivar-group) chrom... 62 5e-007
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 62 5e-007
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 62 5e-007
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 62 5e-007
dbj|AK071819.1| Oryza sativa (japonica cultivar-group) cDNA... 60 2e-006
gb|AACV01002157.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
ref|XM_463421.1| Oryza sativa (japonica cultivar-group), p... 60 2e-006
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 60 2e-006
dbj|AP003373.3| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
ref|NM_186798.1| Oryza sativa (japonica cultivar-group), mRNA 58 7e-006
gb|CB659047.1|CB659047 OSJNEc15K11.f OSJNEc Oryza sativa (j... 56 3e-005
dbj|AP004340.5| Oryza sativa (japonica cultivar-group) geno... 56 3e-005
gb|AACV01015535.1| Oryza sativa (japonica cultivar-group) c... 56 3e-005
ref|NM_186788.1| Oryza sativa (japonica cultivar-group), mRNA 56 3e-005
gb|AQ688115.1|AQ688115 nbxb0077A12r CUGI Rice BAC Library O... 54 1e-004
gb|CB651523.1|CB651523 OSJNEb16I07.r OSJNEb Oryza sativa (j... 54 1e-004
gb|CB661740.1|CB661740 OSJNEd05A15.r OSJNEd Oryza sativa (j... 54 1e-004
gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 ... 54 1e-004
gb|AACV01008189.1| Oryza sativa (japonica cultivar-group) c... 54 1e-004
ref|NM_185146.1| Oryza sativa (japonica cultivar-group), mRNA 54 1e-004
ref|NT_107188.1| Oryza sativa (japonica cultivar-group) 54 1e-004
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 54 1e-004
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
gb|CB643291.1|CB643291 OSJNEb03O11.f OSJNEb Oryza sativa (j... 52 5e-004
gb|CB643653.1|CB643653 OSJNEb04H10.r OSJNEb Oryza sativa (j... 52 5e-004
gb|CB643719.1|CB643719 OSJNEb04J03.r OSJNEb Oryza sativa (j... 52 5e-004
gb|CB643721.1|CB643721 OSJNEb04J04.r OSJNEb Oryza sativa (j... 52 5e-004
gb|CB657828.1|CB657828 OSJNEc13H06.f OSJNEc Oryza sativa (j... 52 5e-004
gb|CB657829.1|CB657829 OSJNEc13H06.r OSJNEc Oryza sativa (j... 52 5e-004
gb|CB677705.1|CB677705 OSJNEe14P10.r OSJNEe Oryza sativa (j... 52 5e-004
dbj|AK065112.1| Oryza sativa (japonica cultivar-group) cDNA... 52 5e-004
gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 ... 52 5e-004
ref|NT_107075.1| Oryza sativa (japonica cultivar-group) 52 5e-004
gb|AACV01007204.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
gb|AACV01020390.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
ref|NT_107174.1| Oryza sativa (japonica cultivar-group) 52 5e-004
dbj|AP006173.3| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
gb|CB645026.1|CB645026 OSJNEb06H20.r OSJNEb Oryza sativa (j... 50 0.002
dbj|AK065987.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK105912.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK119544.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
gb|AACV01016342.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
ref|XM_478346.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.002
ref|XM_506362.1| PREDICTED Oryza sativa (japonica cultivar-... 50 0.002
dbj|AP005185.4| Oryza sativa (japonica cultivar-group) geno... 50 0.002
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 50 0.002
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
dbj|AK108674.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.007
dbj|AP005259.3| Oryza sativa (japonica cultivar-group) geno... 48 0.007
dbj|AP005171.3| Oryza sativa (japonica cultivar-group) geno... 48 0.007
gb|AC129717.3| Oryza sativa (japonica cultivar-group) chrom... 48 0.007
gb|AACV01012676.1| Oryza sativa (japonica cultivar-group) c... 48 0.007
gb|AACV01015372.1| Oryza sativa (japonica cultivar-group) c... 48 0.007
ref|XM_477027.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.007
ref|NT_107220.1| Oryza sativa (japonica cultivar-group) 48 0.007
gb|CH401220.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.007
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.007
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.007
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 48 0.007
gb|CB668190.1|CB668190 OSJNEd15O18.r OSJNEd Oryza sativa (j... 46 0.029
dbj|AK060146.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.029
gb|AC131374.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.029
gb|AACV01021220.1| Oryza sativa (japonica cultivar-group) c... 46 0.029
gb|AACV01021221.1| Oryza sativa (japonica cultivar-group) c... 46 0.029
ref|NM_195766.1| Oryza sativa (japonica cultivar-group) hyp... 46 0.029
ref|NM_195768.1| Oryza sativa (japonica cultivar-group) put... 46 0.029
gb|CA754538.1|CA754538 BR030001000_PLATE_C03_19_020.ab1 OA ... 44 0.11
gb|CB646078.1|CB646078 OSJNEb08E05.r OSJNEb Oryza sativa (j... 44 0.11
gb|CB646298.1|CB646298 OSJNEb08K19.f OSJNEb Oryza sativa (j... 44 0.11
gb|CB655822.1|CB655822 OSJNEc09J11.f OSJNEc Oryza sativa (j... 44 0.11
gb|CB655823.1|CB655823 OSJNEc09J11.r OSJNEc Oryza sativa (j... 44 0.11
gb|CB666716.1|CB666716 OSJNEd13L14.r OSJNEd Oryza sativa (j... 44 0.11
gb|CB671618.1|CB671618 OSJNEe05E12.r OSJNEe Oryza sativa (j... 44 0.11
gb|CB679495.1|CB679495 OSJNEf03B04.r OSJNEf Oryza sativa (j... 44 0.11
gb|CB679818.1|CB679818 OSJNEf03M17.r OSJNEf Oryza sativa (j... 44 0.11
gb|CB680688.1|CB680688 OSJNEf05N23.f OSJNEf Oryza sativa (j... 44 0.11
gb|CB680689.1|CB680689 OSJNEf05N23.r OSJNEf Oryza sativa (j... 44 0.11
gb|CB683695.1|CB683695 OSJNEf12G22.f OSJNEf Oryza sativa (j... 44 0.11
gb|CD670635.1|CD670635 OsMR050 5MT resistant rice mutant cD... 44 0.11
gb|AF527714.1|AF527714 AF527714 Oryza sativa (japonica cult... 44 0.11
dbj|AK068586.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.11
dbj|AK100744.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.11
dbj|AK105478.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.11
gb|AY459338.1| Oryza sativa (japonica cultivar-group) clone... 44 0.11
gb|AC118347.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.11
gb|AC136842.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.11
ref|NT_107132.1| Oryza sativa (japonica cultivar-group) 44 0.11
ref|NT_107236.1| Oryza sativa (japonica cultivar-group) 44 0.11
gb|AACV01000295.1| Oryza sativa (japonica cultivar-group) c... 44 0.11
gb|AACV01013586.1| Oryza sativa (japonica cultivar-group) c... 44 0.11
gb|AACV01023525.1| Oryza sativa (japonica cultivar-group) c... 44 0.11
dbj|AP002524.2| Oryza sativa (japonica cultivar-group) geno... 44 0.11
dbj|AP006050.3| Oryza sativa (japonica cultivar-group) geno... 44 0.11
ref|NM_189539.1| Oryza sativa (japonica cultivar-group), p... 44 0.11
ref|XM_478348.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.11
ref|XM_478349.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.11
ref|XM_550389.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.11
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 44 0.11
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.11
gb|CH401210.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.11
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.11
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.11
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.11
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 44 0.11
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 44 0.11
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.11
gb|AQ866659.1|AQ866659 nbeb0028P11f CUGI Rice BAC Library (... 42 0.45
gb|AZ047464.1|AZ047464 nbeb0094M23f CUGI Rice BAC Library (... 42 0.45
gb|AZ131490.1|AZ131490 OSJNBb0111A07f CUGI Rice BAC Library... 42 0.45
gb|CB648148.1|CB648148 OSJNEb11G14.r OSJNEb Oryza sativa (j... 42 0.45
gb|CB675196.1|CB675196 OSJNEe10M08.r OSJNEe Oryza sativa (j... 42 0.45
gb|AC125385.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.45
dbj|AK062283.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.45
dbj|AK068040.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.45
dbj|AK101659.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.45
dbj|AK103824.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.45
dbj|AK105275.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.45
dbj|AK105783.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.45
dbj|AK105966.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.45
dbj|AP003872.3| Oryza sativa (japonica cultivar-group) geno... 42 0.45
dbj|AP004636.3| Oryza sativa (japonica cultivar-group) geno... 42 0.45
dbj|AK119530.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.45
gb|AC074282.4| Oryza sativa (japonica cultivar-group) chrom... 42 0.45
gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 ... 42 0.45
gb|AC145127.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.45
gb|AC145384.2| Oryza sativa chromosome 3 BAC OSJNBa0060M17 ... 42 0.45
emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromoso... 42 0.45
dbj|AP004192.3| Oryza sativa (japonica cultivar-group) geno... 42 0.45
dbj|AP006525.2| Oryza sativa (japonica cultivar-group) geno... 42 0.45
dbj|AP006070.2| Oryza sativa (japonica cultivar-group) geno... 42 0.45
gb|AC109596.3| Oryza sativa (japonica cultivar-group) chrom... 42 0.45
gb|AC108499.3| Oryza sativa (japonica cultivar-group) chrom... 42 0.45
dbj|AP002843.2| Oryza sativa (japonica cultivar-group) geno... 42 0.45
gb|AACV01001845.1| Oryza sativa (japonica cultivar-group) c... 42 0.45
gb|AACV01001928.1| Oryza sativa (japonica cultivar-group) c... 42 0.45
gb|AACV01002128.1| Oryza sativa (japonica cultivar-group) c... 42 0.45
gb|AACV01004764.1| Oryza sativa (japonica cultivar-group) c... 42 0.45
gb|AACV01004995.1| Oryza sativa (japonica cultivar-group) c... 42 0.45
gb|AACV01008134.1| Oryza sativa (japonica cultivar-group) c... 42 0.45
gb|AACV01009347.1| Oryza sativa (japonica cultivar-group) c... 42 0.45
gb|AACV01010075.1| Oryza sativa (japonica cultivar-group) c... 42 0.45
gb|AACV01010461.1| Oryza sativa (japonica cultivar-group) c... 42 0.45
gb|AACV01011018.1| Oryza sativa (japonica cultivar-group) c... 42 0.45
gb|AACV01011409.1| Oryza sativa (japonica cultivar-group) c... 42 0.45
gb|AACV01012608.1| Oryza sativa (japonica cultivar-group) c... 42 0.45
gb|AACV01013582.1| Oryza sativa (japonica cultivar-group) c... 42 0.45
gb|AACV01020395.1| Oryza sativa (japonica cultivar-group) c... 42 0.45
gb|AACV01028249.1| Oryza sativa (japonica cultivar-group) C... 42 0.45
dbj|AP003607.3| Oryza sativa (japonica cultivar-group) geno... 42 0.45
dbj|AP005695.3| Oryza sativa (japonica cultivar-group) geno... 42 0.45
dbj|AP004367.4| Oryza sativa (japonica cultivar-group) geno... 42 0.45
ref|NM_192093.1| Oryza sativa (japonica cultivar-group), p... 42 0.45
ref|NM_192244.1| Oryza sativa (japonica cultivar-group), p... 42 0.45
ref|NM_192834.1| Oryza sativa (japonica cultivar-group), p... 42 0.45
ref|NM_194659.1| Oryza sativa (japonica cultivar-group) put... 42 0.45
ref|NT_080060.1| Oryza sativa (japonica cultivar-group) chr... 42 0.45
ref|XM_466413.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.45
ref|XM_466915.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.45
ref|XM_470041.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.45
ref|XM_471827.1| Oryza sativa (japonica cultivar-group), p... 42 0.45
ref|XM_473094.1| Oryza sativa (japonica cultivar-group), p... 42 0.45
ref|XM_476066.1| Oryza sativa (japonica cultivar-group), p... 42 0.45
ref|XM_482293.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.45
ref|NT_079864.2| Oryza sativa (japonica cultivar-group) 42 0.45
ref|NT_079866.2| Oryza sativa (japonica cultivar-group) 42 0.45
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 42 0.45
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 42 0.45
ref|NT_107196.1| Oryza sativa (japonica cultivar-group) 42 0.45
ref|NT_107218.1| Oryza sativa (japonica cultivar-group) 42 0.45
ref|NT_107223.1| Oryza sativa (japonica cultivar-group) 42 0.45
dbj|AP006161.3| Oryza sativa (japonica cultivar-group) geno... 42 0.45
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 42 0.45
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 42 0.45
dbj|AP003455.2| Oryza sativa (japonica cultivar-group) geno... 42 0.45
dbj|AP003452.3| Oryza sativa (japonica cultivar-group) geno... 42 0.45
dbj|AP003328.3| Oryza sativa (japonica cultivar-group) geno... 42 0.45
gb|AC135425.3| Oryza sativa (japonica cultivar-group) chrom... 42 0.45
gb|CH401195.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.45
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.45
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.45
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.45
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.45
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.45
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.45
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.45
emb|AL606443.3|OSJN00008 Oryza sativa genomic DNA, chromoso... 42 0.45
emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromoso... 42 0.45
emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromoso... 42 0.45
emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromoso... 42 0.45
gb|AC130610.3| Oryza sativa (japonica cultivar-group) chrom... 42 0.45
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 42 0.45
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 42 0.45
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 42 0.45
>gb|CB653386.1|CB653386 OSJNEc04F22.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc04F22 3', mRNA sequence
Length = 758
Score = 176 bits (89), Expect = 1e-041
Identities = 167/193 (86%)
Strand = Plus / Plus
Query: 345 cccgatgccccactggtgcgtcacatacctcgcgttcactatctgctcggcgaagcacgg 404
||||| |||||||||||||||||| |||||||||||||| |||| ||||||||||||||
Sbjct: 405 cccgacgccccactggtgcgtcacgtacctcgcgttcaccgtctggtcggcgaagcacgg 464
Query: 405 ctgcacgagcatgggcaccccttcggatatggcctccaccatggatttccacccgcagtg 464
| || |||||||||||||||| || | | | ||||| | | || ||||||||||||||
Sbjct: 465 ccgcgcgagcatgggcaccccctcacagacgctctccagcgtcgagttccacccgcagtg 524
Query: 465 cgtccagaacccacccaccgccgggtgcgccaggacctccctctgcggtgcccacgccac 524
|||||||||||| || | ||||||||||||||||| ||||||||||| ||||| | |||
Sbjct: 525 cgtccagaacccgccgatggccgggtgcgccaggacgtccctctgcggcgcccatggcac 584
Query: 525 gatcttgcccctg 537
|||||||||||||
Sbjct: 585 gatcttgcccctg 597
Score = 69.9 bits (35), Expect = 2e-009
Identities = 101/123 (82%)
Strand = Plus / Plus
Query: 600 gccgcggacggagccgcggcggaggacccacaggaacggcacgccgctgccggccagcgc 659
|||||||||||||||| | ||| |||||| |||||||||||||||||| |||| || |
Sbjct: 633 gccgcggacggagccgggccggttgacccagaggaacggcacgccgctggcggcgagacc 692
Query: 660 ccacgccgtctcctcgaacacggcgcggtcgacgcgcgccacgctgcccatgctgacgta 719
||||||| | || ||||||| | || |||||| || || ||||| |||| ||| |||||
Sbjct: 693 ccacgccatttcgtcgaacatgtcgtggtcgatgcaggcgacgctccccaggctcacgta 752
Query: 720 cag 722
|||
Sbjct: 753 cag 755
>dbj|AK064151.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-E05, full
insert sequence
Length = 1648
Score = 176 bits (89), Expect = 1e-041
Identities = 167/193 (86%)
Strand = Plus / Minus
Query: 345 cccgatgccccactggtgcgtcacatacctcgcgttcactatctgctcggcgaagcacgg 404
||||| |||||||||||||||||| |||||||||||||| |||| ||||||||||||||
Sbjct: 1273 cccgacgccccactggtgcgtcacgtacctcgcgttcaccgtctggtcggcgaagcacgg 1214
Query: 405 ctgcacgagcatgggcaccccttcggatatggcctccaccatggatttccacccgcagtg 464
| || |||||||||||||||| || | | | ||||| | | || ||||||||||||||
Sbjct: 1213 ccgcgcgagcatgggcaccccctcacagacgctctccagcgtcgagttccacccgcagtg 1154
Query: 465 cgtccagaacccacccaccgccgggtgcgccaggacctccctctgcggtgcccacgccac 524
|||||||||||| || | ||||||||||||||||| ||||||||||| ||||| | |||
Sbjct: 1153 cgtccagaacccgccgatggccgggtgcgccaggacgtccctctgcggcgcccatggcac 1094
Query: 525 gatcttgcccctg 537
|||||||||||||
Sbjct: 1093 gatcttgcccctg 1081
Score = 123 bits (62), Expect = 2e-025
Identities = 146/174 (83%)
Strand = Plus / Minus
Query: 600 gccgcggacggagccgcggcggaggacccacaggaacggcacgccgctgccggccagcgc 659
|||||||||||||||| | ||| |||||| |||||||||||||||||| |||| || |
Sbjct: 1045 gccgcggacggagccgggccggttgacccagaggaacggcacgccgctggcggcgagacc 986
Query: 660 ccacgccgtctcctcgaacacggcgcggtcgacgcgcgccacgctgcccatgctgacgta 719
||||||| | || ||||||| | || |||||| || || ||||| |||| ||| |||||
Sbjct: 985 ccacgccatttcgtcgaacatgtcgtggtcgatgcaggcgacgctccccaggctcacgta 926
Query: 720 cagaacggagcgcggcgggcgcgcgtccagccacgccaagcaggtggggtccgg 773
||| ||||||||||||||| |||||||||||||||| | ||||| | |||||||
Sbjct: 925 cagcacggagcgcggcgggtgcgcgtccagccacgcgaggcaggcgcggtccgg 872
>dbj|AP004382.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0418E08
Length = 141040
Score = 176 bits (89), Expect = 1e-041
Identities = 167/193 (86%)
Strand = Plus / Minus
Query: 345 cccgatgccccactggtgcgtcacatacctcgcgttcactatctgctcggcgaagcacgg 404
||||| |||||||||||||||||| |||||||||||||| |||| ||||||||||||||
Sbjct: 61834 cccgacgccccactggtgcgtcacgtacctcgcgttcaccgtctggtcggcgaagcacgg 61775
Query: 405 ctgcacgagcatgggcaccccttcggatatggcctccaccatggatttccacccgcagtg 464
| || |||||||||||||||| || | | | ||||| | | || ||||||||||||||
Sbjct: 61774 ccgcgcgagcatgggcaccccctcacagacgctctccagcgtcgagttccacccgcagtg 61715
Query: 465 cgtccagaacccacccaccgccgggtgcgccaggacctccctctgcggtgcccacgccac 524
|||||||||||| || | ||||||||||||||||| ||||||||||| ||||| | |||
Sbjct: 61714 cgtccagaacccgccgatggccgggtgcgccaggacgtccctctgcggcgcccatggcac 61655
Query: 525 gatcttgcccctg 537
|||||||||||||
Sbjct: 61654 gatcttgcccctg 61642
Score = 143 bits (72), Expect = 2e-031
Identities = 132/152 (86%)
Strand = Plus / Plus
Query: 346 ccgatgccccactggtgcgtcacatacctcgcgttcactatctgctcggcgaagcacggc 405
|||| |||||||||||||||||| |||||||||||||| |||| ||| ||||||| |||
Sbjct: 117645 ccgacgccccactggtgcgtcacgtacctcgcgttcaccgtctggtcgccgaagcatggc 117704
Query: 406 tgcacgagcatgggcaccccttcggatatggcctccaccatggatttccacccgcagtgc 465
||| |||||||||||||||||||| | ||| |||| | | || |||||||||||||||
Sbjct: 117705 tgcgcgagcatgggcaccccttcgcagatgctatccagcgtcgagttccacccgcagtgc 117764
Query: 466 gtccagaacccacccaccgccgggtgcgccag 497
||||||||||| || | |||||||||||||||
Sbjct: 117765 gtccagaacccgccgatcgccgggtgcgccag 117796
Score = 123 bits (62), Expect = 2e-025
Identities = 146/174 (83%)
Strand = Plus / Minus
Query: 600 gccgcggacggagccgcggcggaggacccacaggaacggcacgccgctgccggccagcgc 659
|||||||||||||||| | ||| |||||| |||||||||||||||||| |||| || |
Sbjct: 61606 gccgcggacggagccgggccggttgacccagaggaacggcacgccgctggcggcgagacc 61547
Query: 660 ccacgccgtctcctcgaacacggcgcggtcgacgcgcgccacgctgcccatgctgacgta 719
||||||| | || ||||||| | || |||||| || || ||||| |||| ||| |||||
Sbjct: 61546 ccacgccatttcgtcgaacatgtcgtggtcgatgcaggcgacgctccccaggctcacgta 61487
Query: 720 cagaacggagcgcggcgggcgcgcgtccagccacgccaagcaggtggggtccgg 773
||| ||||||||||||||| |||||||||||||||| | ||||| | |||||||
Sbjct: 61486 cagcacggagcgcggcgggtgcgcgtccagccacgcgaggcaggcgcggtccgg 61433
Score = 77.8 bits (39), Expect = 8e-012
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 673 tcgaacacggcgcggtcgacgcgcgccacgctgcccatgctgacgtacagaacggagcgc 732
|||||||| ||||||||| ||||||||||||||| | ||| |||||||| ||||| |||
Sbjct: 117973 tcgaacacctcgcggtcgatgcgcgccacgctgccgaggctcacgtacagcacggaccgc 118032
Query: 733 ggcgggcgcgcgtccagccacgc 755
|||| | |||||| |||||||||
Sbjct: 118033 ggcgagtgcgcgtgcagccacgc 118055
Score = 58.0 bits (29), Expect = 7e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 462 gtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgcggtgccca 518
||||||||| |||||||||||||| |||| || || |||||| |||||||||||||
Sbjct: 57614 gtgcgtccaaaacccacccaccgcatggtgagctagcacctccgtctgcggtgccca 57558
>gb|AACV01015538.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015538, whole
genome shotgun sequence
Length = 47958
Score = 176 bits (89), Expect = 1e-041
Identities = 167/193 (86%)
Strand = Plus / Minus
Query: 345 cccgatgccccactggtgcgtcacatacctcgcgttcactatctgctcggcgaagcacgg 404
||||| |||||||||||||||||| |||||||||||||| |||| ||||||||||||||
Sbjct: 14074 cccgacgccccactggtgcgtcacgtacctcgcgttcaccgtctggtcggcgaagcacgg 14015
Query: 405 ctgcacgagcatgggcaccccttcggatatggcctccaccatggatttccacccgcagtg 464
| || |||||||||||||||| || | | | ||||| | | || ||||||||||||||
Sbjct: 14014 ccgcgcgagcatgggcaccccctcacagacgctctccagcgtcgagttccacccgcagtg 13955
Query: 465 cgtccagaacccacccaccgccgggtgcgccaggacctccctctgcggtgcccacgccac 524
|||||||||||| || | ||||||||||||||||| ||||||||||| ||||| | |||
Sbjct: 13954 cgtccagaacccgccgatggccgggtgcgccaggacgtccctctgcggcgcccatggcac 13895
Query: 525 gatcttgcccctg 537
|||||||||||||
Sbjct: 13894 gatcttgcccctg 13882
Score = 123 bits (62), Expect = 2e-025
Identities = 146/174 (83%)
Strand = Plus / Minus
Query: 600 gccgcggacggagccgcggcggaggacccacaggaacggcacgccgctgccggccagcgc 659
|||||||||||||||| | ||| |||||| |||||||||||||||||| |||| || |
Sbjct: 13846 gccgcggacggagccgggccggttgacccagaggaacggcacgccgctggcggcgagacc 13787
Query: 660 ccacgccgtctcctcgaacacggcgcggtcgacgcgcgccacgctgcccatgctgacgta 719
||||||| | || ||||||| | || |||||| || || ||||| |||| ||| |||||
Sbjct: 13786 ccacgccatttcgtcgaacatgtcgtggtcgatgcaggcgacgctccccaggctcacgta 13727
Query: 720 cagaacggagcgcggcgggcgcgcgtccagccacgccaagcaggtggggtccgg 773
||| ||||||||||||||| |||||||||||||||| | ||||| | |||||||
Sbjct: 13726 cagcacggagcgcggcgggtgcgcgtccagccacgcgaggcaggcgcggtccgg 13673
Score = 58.0 bits (29), Expect = 7e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 462 gtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgcggtgccca 518
||||||||| |||||||||||||| |||| || || |||||| |||||||||||||
Sbjct: 9878 gtgcgtccaaaacccacccaccgcatggtgagctagcacctccgtctgcggtgccca 9822
>ref|XM_477223.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1648
Score = 176 bits (89), Expect = 1e-041
Identities = 167/193 (86%)
Strand = Plus / Minus
Query: 345 cccgatgccccactggtgcgtcacatacctcgcgttcactatctgctcggcgaagcacgg 404
||||| |||||||||||||||||| |||||||||||||| |||| ||||||||||||||
Sbjct: 1273 cccgacgccccactggtgcgtcacgtacctcgcgttcaccgtctggtcggcgaagcacgg 1214
Query: 405 ctgcacgagcatgggcaccccttcggatatggcctccaccatggatttccacccgcagtg 464
| || |||||||||||||||| || | | | ||||| | | || ||||||||||||||
Sbjct: 1213 ccgcgcgagcatgggcaccccctcacagacgctctccagcgtcgagttccacccgcagtg 1154
Query: 465 cgtccagaacccacccaccgccgggtgcgccaggacctccctctgcggtgcccacgccac 524
|||||||||||| || | ||||||||||||||||| ||||||||||| ||||| | |||
Sbjct: 1153 cgtccagaacccgccgatggccgggtgcgccaggacgtccctctgcggcgcccatggcac 1094
Query: 525 gatcttgcccctg 537
|||||||||||||
Sbjct: 1093 gatcttgcccctg 1081
Score = 123 bits (62), Expect = 2e-025
Identities = 146/174 (83%)
Strand = Plus / Minus
Query: 600 gccgcggacggagccgcggcggaggacccacaggaacggcacgccgctgccggccagcgc 659
|||||||||||||||| | ||| |||||| |||||||||||||||||| |||| || |
Sbjct: 1045 gccgcggacggagccgggccggttgacccagaggaacggcacgccgctggcggcgagacc 986
Query: 660 ccacgccgtctcctcgaacacggcgcggtcgacgcgcgccacgctgcccatgctgacgta 719
||||||| | || ||||||| | || |||||| || || ||||| |||| ||| |||||
Sbjct: 985 ccacgccatttcgtcgaacatgtcgtggtcgatgcaggcgacgctccccaggctcacgta 926
Query: 720 cagaacggagcgcggcgggcgcgcgtccagccacgccaagcaggtggggtccgg 773
||| ||||||||||||||| |||||||||||||||| | ||||| | |||||||
Sbjct: 925 cagcacggagcgcggcgggtgcgcgtccagccacgcgaggcaggcgcggtccgg 872
>ref|NT_079879.2| Oryza sativa (japonica cultivar-group)
Length = 11570172
Score = 176 bits (89), Expect = 1e-041
Identities = 167/193 (86%)
Strand = Plus / Minus
Query: 345 cccgatgccccactggtgcgtcacatacctcgcgttcactatctgctcggcgaagcacgg 404
||||| |||||||||||||||||| |||||||||||||| |||| ||||||||||||||
Sbjct: 7901547 cccgacgccccactggtgcgtcacgtacctcgcgttcaccgtctggtcggcgaagcacgg 7901488
Query: 405 ctgcacgagcatgggcaccccttcggatatggcctccaccatggatttccacccgcagtg 464
| || |||||||||||||||| || | | | ||||| | | || ||||||||||||||
Sbjct: 7901487 ccgcgcgagcatgggcaccccctcacagacgctctccagcgtcgagttccacccgcagtg 7901428
Query: 465 cgtccagaacccacccaccgccgggtgcgccaggacctccctctgcggtgcccacgccac 524
|||||||||||| || | ||||||||||||||||| ||||||||||| ||||| | |||
Sbjct: 7901427 cgtccagaacccgccgatggccgggtgcgccaggacgtccctctgcggcgcccatggcac 7901368
Query: 525 gatcttgcccctg 537
|||||||||||||
Sbjct: 7901367 gatcttgcccctg 7901355
Score = 143 bits (72), Expect = 2e-031
Identities = 132/152 (86%)
Strand = Plus / Plus
Query: 346 ccgatgccccactggtgcgtcacatacctcgcgttcactatctgctcggcgaagcacggc 405
|||| |||||||||||||||||| |||||||||||||| |||| ||| ||||||| |||
Sbjct: 7957358 ccgacgccccactggtgcgtcacgtacctcgcgttcaccgtctggtcgccgaagcatggc 7957417
Query: 406 tgcacgagcatgggcaccccttcggatatggcctccaccatggatttccacccgcagtgc 465
||| |||||||||||||||||||| | ||| |||| | | || |||||||||||||||
Sbjct: 7957418 tgcgcgagcatgggcaccccttcgcagatgctatccagcgtcgagttccacccgcagtgc 7957477
Query: 466 gtccagaacccacccaccgccgggtgcgccag 497
||||||||||| || | |||||||||||||||
Sbjct: 7957478 gtccagaacccgccgatcgccgggtgcgccag 7957509
Score = 123 bits (62), Expect = 2e-025
Identities = 146/174 (83%)
Strand = Plus / Minus
Query: 600 gccgcggacggagccgcggcggaggacccacaggaacggcacgccgctgccggccagcgc 659
|||||||||||||||| | ||| |||||| |||||||||||||||||| |||| || |
Sbjct: 7901319 gccgcggacggagccgggccggttgacccagaggaacggcacgccgctggcggcgagacc 7901260
Query: 660 ccacgccgtctcctcgaacacggcgcggtcgacgcgcgccacgctgcccatgctgacgta 719
||||||| | || ||||||| | || |||||| || || ||||| |||| ||| |||||
Sbjct: 7901259 ccacgccatttcgtcgaacatgtcgtggtcgatgcaggcgacgctccccaggctcacgta 7901200
Query: 720 cagaacggagcgcggcgggcgcgcgtccagccacgccaagcaggtggggtccgg 773
||| ||||||||||||||| |||||||||||||||| | ||||| | |||||||
Sbjct: 7901199 cagcacggagcgcggcgggtgcgcgtccagccacgcgaggcaggcgcggtccgg 7901146
Score = 77.8 bits (39), Expect = 8e-012
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 673 tcgaacacggcgcggtcgacgcgcgccacgctgcccatgctgacgtacagaacggagcgc 732
|||||||| ||||||||| ||||||||||||||| | ||| |||||||| ||||| |||
Sbjct: 7957686 tcgaacacctcgcggtcgatgcgcgccacgctgccgaggctcacgtacagcacggaccgc 7957745
Query: 733 ggcgggcgcgcgtccagccacgc 755
|||| | |||||| |||||||||
Sbjct: 7957746 ggcgagtgcgcgtgcagccacgc 7957768
Score = 58.0 bits (29), Expect = 7e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 462 gtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgcggtgccca 518
||||||||| |||||||||||||| |||| || || |||||| |||||||||||||
Sbjct: 7897327 gtgcgtccaaaacccacccaccgcatggtgagctagcacctccgtctgcggtgccca 7897271
Score = 56.0 bits (28), Expect = 3e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
||||| |||||||||||||||||| | | |||||||||||||||||||||| ||||
Sbjct: 7828202 ttccagccgcagtgcgtccagaacgcggcggtcgccgggtgcgccaggacctcctcctgc 7828143
Query: 511 ggtgccca 518
|| |||||
Sbjct: 7828142 ggcgccca 7828135
Score = 48.1 bits (24), Expect = 0.007
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 452 tccacccgcagtgcgtccagaacccacccaccgccgggtgcgccagga 499
||||||| ||||||||| ||||||| ||| |||| ||||||||||||
Sbjct: 5452722 tccacccacagtgcgtcaagaacccgcccgtcgcccggtgcgccagga 5452675
>gb|CH401221.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000058 genomic
scaffold, whole genome shotgun sequence
Length = 3500188
Score = 176 bits (89), Expect = 1e-041
Identities = 167/193 (86%)
Strand = Plus / Minus
Query: 345 cccgatgccccactggtgcgtcacatacctcgcgttcactatctgctcggcgaagcacgg 404
||||| |||||||||||||||||| |||||||||||||| |||| ||||||||||||||
Sbjct: 1760909 cccgacgccccactggtgcgtcacgtacctcgcgttcaccgtctggtcggcgaagcacgg 1760850
Query: 405 ctgcacgagcatgggcaccccttcggatatggcctccaccatggatttccacccgcagtg 464
| || |||||||||||||||| || | | | ||||| | | || ||||||||||||||
Sbjct: 1760849 ccgcgcgagcatgggcaccccctcacagacgctctccagcgtcgagttccacccgcagtg 1760790
Query: 465 cgtccagaacccacccaccgccgggtgcgccaggacctccctctgcggtgcccacgccac 524
|||||||||||| || | ||||||||||||||||| ||||||||||| ||||| | |||
Sbjct: 1760789 cgtccagaacccgccgatggccgggtgcgccaggacgtccctctgcggcgcccatggcac 1760730
Query: 525 gatcttgcccctg 537
|||||||||||||
Sbjct: 1760729 gatcttgcccctg 1760717
Score = 143 bits (72), Expect = 2e-031
Identities = 132/152 (86%)
Strand = Plus / Plus
Query: 346 ccgatgccccactggtgcgtcacatacctcgcgttcactatctgctcggcgaagcacggc 405
|||| |||||||||||||||||| |||||||||||||| |||| ||| ||||||| |||
Sbjct: 1814803 ccgacgccccactggtgcgtcacgtacctcgcgttcaccgtctggtcgccgaagcatggc 1814862
Query: 406 tgcacgagcatgggcaccccttcggatatggcctccaccatggatttccacccgcagtgc 465
||| |||||||||||||||||||| | ||| |||| | | || |||||||||||||||
Sbjct: 1814863 tgcgcgagcatgggcaccccttcgcagatgctatccagcgtcgagttccacccgcagtgc 1814922
Query: 466 gtccagaacccacccaccgccgggtgcgccag 497
||||||||||| || | |||||||||||||||
Sbjct: 1814923 gtccagaacccgccgatcgccgggtgcgccag 1814954
Score = 123 bits (62), Expect = 2e-025
Identities = 146/174 (83%)
Strand = Plus / Minus
Query: 600 gccgcggacggagccgcggcggaggacccacaggaacggcacgccgctgccggccagcgc 659
|||||||||||||||| | ||| |||||| |||||||||||||||||| |||| || |
Sbjct: 1760681 gccgcggacggagccgggccggttgacccagaggaacggcacgccgctggcggcgagacc 1760622
Query: 660 ccacgccgtctcctcgaacacggcgcggtcgacgcgcgccacgctgcccatgctgacgta 719
||||||| | || ||||||| | || |||||| || || ||||| |||| ||| |||||
Sbjct: 1760621 ccacgccatttcgtcgaacatgtcgtggtcgatgcaggcgacgctccccaggctcacgta 1760562
Query: 720 cagaacggagcgcggcgggcgcgcgtccagccacgccaagcaggtggggtccgg 773
||| ||||||||||||||| |||||||||||||||| | ||||| | |||||||
Sbjct: 1760561 cagcacggagcgcggcgggtgcgcgtccagccacgcgaggcaggcgcggtccgg 1760508
Score = 77.8 bits (39), Expect = 8e-012
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 673 tcgaacacggcgcggtcgacgcgcgccacgctgcccatgctgacgtacagaacggagcgc 732
|||||||| ||||||||| ||||||||||||||| | ||| |||||||| ||||| |||
Sbjct: 1815131 tcgaacacctcgcggtcgatgcgcgccacgctgccgaggctcacgtacagcacggaccgc 1815190
Query: 733 ggcgggcgcgcgtccagccacgc 755
|||| | |||||| |||||||||
Sbjct: 1815191 ggcgagtgcgcgtgcagccacgc 1815213
Score = 58.0 bits (29), Expect = 7e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 462 gtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgcggtgccca 518
||||||||| |||||||||||||| |||| || || |||||| |||||||||||||
Sbjct: 1756713 gtgcgtccaaaacccacccaccgcatggtgagctagcacctccgtctgcggtgccca 1756657
Score = 56.0 bits (28), Expect = 3e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
||||| |||||||||||||||||| | | |||||||||||||||||||||| ||||
Sbjct: 1696019 ttccagccgcagtgcgtccagaacgcggcggtcgccgggtgcgccaggacctcctcctgc 1695960
Query: 511 ggtgccca 518
|| |||||
Sbjct: 1695959 ggcgccca 1695952
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 176 bits (89), Expect = 1e-041
Identities = 167/193 (86%)
Strand = Plus / Minus
Query: 345 cccgatgccccactggtgcgtcacatacctcgcgttcactatctgctcggcgaagcacgg 404
||||| |||||||||||||||||| |||||||||||||| |||| ||||||||||||||
Sbjct: 7814534 cccgacgccccactggtgcgtcacgtacctcgcgttcaccgtctggtcggcgaagcacgg 7814475
Query: 405 ctgcacgagcatgggcaccccttcggatatggcctccaccatggatttccacccgcagtg 464
| || |||||||||||||||| || | | | ||||| | | || ||||||||||||||
Sbjct: 7814474 ccgcgcgagcatgggcaccccctcacagacgctctccagcgtcgagttccacccgcagtg 7814415
Query: 465 cgtccagaacccacccaccgccgggtgcgccaggacctccctctgcggtgcccacgccac 524
|||||||||||| || | ||||||||||||||||| ||||||||||| ||||| | |||
Sbjct: 7814414 cgtccagaacccgccgatggccgggtgcgccaggacgtccctctgcggcgcccatggcac 7814355
Query: 525 gatcttgcccctg 537
|||||||||||||
Sbjct: 7814354 gatcttgcccctg 7814342
Score = 143 bits (72), Expect = 2e-031
Identities = 132/152 (86%)
Strand = Plus / Plus
Query: 346 ccgatgccccactggtgcgtcacatacctcgcgttcactatctgctcggcgaagcacggc 405
|||| |||||||||||||||||| |||||||||||||| |||| ||| ||||||| |||
Sbjct: 7868428 ccgacgccccactggtgcgtcacgtacctcgcgttcaccgtctggtcgccgaagcatggc 7868487
Query: 406 tgcacgagcatgggcaccccttcggatatggcctccaccatggatttccacccgcagtgc 465
||| |||||||||||||||||||| | ||| |||| | | || |||||||||||||||
Sbjct: 7868488 tgcgcgagcatgggcaccccttcgcagatgctatccagcgtcgagttccacccgcagtgc 7868547
Query: 466 gtccagaacccacccaccgccgggtgcgccag 497
||||||||||| || | |||||||||||||||
Sbjct: 7868548 gtccagaacccgccgatcgccgggtgcgccag 7868579
Score = 123 bits (62), Expect = 2e-025
Identities = 146/174 (83%)
Strand = Plus / Minus
Query: 600 gccgcggacggagccgcggcggaggacccacaggaacggcacgccgctgccggccagcgc 659
|||||||||||||||| | ||| |||||| |||||||||||||||||| |||| || |
Sbjct: 7814306 gccgcggacggagccgggccggttgacccagaggaacggcacgccgctggcggcgagacc 7814247
Query: 660 ccacgccgtctcctcgaacacggcgcggtcgacgcgcgccacgctgcccatgctgacgta 719
||||||| | || ||||||| | || |||||| || || ||||| |||| ||| |||||
Sbjct: 7814246 ccacgccatttcgtcgaacatgtcgtggtcgatgcaggcgacgctccccaggctcacgta 7814187
Query: 720 cagaacggagcgcggcgggcgcgcgtccagccacgccaagcaggtggggtccgg 773
||| ||||||||||||||| |||||||||||||||| | ||||| | |||||||
Sbjct: 7814186 cagcacggagcgcggcgggtgcgcgtccagccacgcgaggcaggcgcggtccgg 7814133
Score = 77.8 bits (39), Expect = 8e-012
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 673 tcgaacacggcgcggtcgacgcgcgccacgctgcccatgctgacgtacagaacggagcgc 732
|||||||| ||||||||| ||||||||||||||| | ||| |||||||| ||||| |||
Sbjct: 7868756 tcgaacacctcgcggtcgatgcgcgccacgctgccgaggctcacgtacagcacggaccgc 7868815
Query: 733 ggcgggcgcgcgtccagccacgc 755
|||| | |||||| |||||||||
Sbjct: 7868816 ggcgagtgcgcgtgcagccacgc 7868838
Score = 58.0 bits (29), Expect = 7e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 462 gtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgcggtgccca 518
||||||||| |||||||||||||| |||| || || |||||| |||||||||||||
Sbjct: 7810338 gtgcgtccaaaacccacccaccgcatggtgagctagcacctccgtctgcggtgccca 7810282
Score = 56.0 bits (28), Expect = 3e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
||||| |||||||||||||||||| | | |||||||||||||||||||||| ||||
Sbjct: 7749644 ttccagccgcagtgcgtccagaacgcggcggtcgccgggtgcgccaggacctcctcctgc 7749585
Query: 511 ggtgccca 518
|| |||||
Sbjct: 7749584 ggcgccca 7749577
Score = 50.1 bits (25), Expect = 0.002
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 445 atggatttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctcc 504
||||| |||||||||||||| ||| |||||| ||||| || | |||||| |||| ||||
Sbjct: 18353430 atggagttccacccgcagtgggtcacgaacccgcccacggcggcgtgcgcgaggatctcc 18353489
Query: 505 ctctgcggtgccc 517
||||||| ||||
Sbjct: 18353490 ttctgcggcgccc 18353502
Score = 48.1 bits (24), Expect = 0.007
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 452 tccacccgcagtgcgtccagaacccacccaccgccgggtgcgccagga 499
||||||| ||||||||| ||||||| ||| |||| ||||||||||||
Sbjct: 5412531 tccacccacagtgcgtcaagaacccgcccgtcgcccggtgcgccagga 5412484
Score = 44.1 bits (22), Expect = 0.11
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 445 atggatttccacccgcagtgcgtccagaacccacccac 482
||||| |||||||||||||||||| |||||| |||||
Sbjct: 18361348 atggagttccacccgcagtgcgtcacgaacccgcccac 18361385
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 176 bits (89), Expect = 1e-041
Identities = 167/193 (86%)
Strand = Plus / Minus
Query: 345 cccgatgccccactggtgcgtcacatacctcgcgttcactatctgctcggcgaagcacgg 404
||||| |||||||||||||||||| |||||||||||||| |||| ||||||||||||||
Sbjct: 7945475 cccgacgccccactggtgcgtcacgtacctcgcgttcaccgtctggtcggcgaagcacgg 7945416
Query: 405 ctgcacgagcatgggcaccccttcggatatggcctccaccatggatttccacccgcagtg 464
| || |||||||||||||||| || | | | ||||| | | || ||||||||||||||
Sbjct: 7945415 ccgcgcgagcatgggcaccccctcacagacgctctccagcgtcgagttccacccgcagtg 7945356
Query: 465 cgtccagaacccacccaccgccgggtgcgccaggacctccctctgcggtgcccacgccac 524
|||||||||||| || | ||||||||||||||||| ||||||||||| ||||| | |||
Sbjct: 7945355 cgtccagaacccgccgatggccgggtgcgccaggacgtccctctgcggcgcccatggcac 7945296
Query: 525 gatcttgcccctg 537
|||||||||||||
Sbjct: 7945295 gatcttgcccctg 7945283
Score = 143 bits (72), Expect = 2e-031
Identities = 132/152 (86%)
Strand = Plus / Plus
Query: 346 ccgatgccccactggtgcgtcacatacctcgcgttcactatctgctcggcgaagcacggc 405
|||| |||||||||||||||||| |||||||||||||| |||| ||| ||||||| |||
Sbjct: 8001286 ccgacgccccactggtgcgtcacgtacctcgcgttcaccgtctggtcgccgaagcatggc 8001345
Query: 406 tgcacgagcatgggcaccccttcggatatggcctccaccatggatttccacccgcagtgc 465
||| |||||||||||||||||||| | ||| |||| | | || |||||||||||||||
Sbjct: 8001346 tgcgcgagcatgggcaccccttcgcagatgctatccagcgtcgagttccacccgcagtgc 8001405
Query: 466 gtccagaacccacccaccgccgggtgcgccag 497
||||||||||| || | |||||||||||||||
Sbjct: 8001406 gtccagaacccgccgatcgccgggtgcgccag 8001437
Score = 123 bits (62), Expect = 2e-025
Identities = 146/174 (83%)
Strand = Plus / Minus
Query: 600 gccgcggacggagccgcggcggaggacccacaggaacggcacgccgctgccggccagcgc 659
|||||||||||||||| | ||| |||||| |||||||||||||||||| |||| || |
Sbjct: 7945247 gccgcggacggagccgggccggttgacccagaggaacggcacgccgctggcggcgagacc 7945188
Query: 660 ccacgccgtctcctcgaacacggcgcggtcgacgcgcgccacgctgcccatgctgacgta 719
||||||| | || ||||||| | || |||||| || || ||||| |||| ||| |||||
Sbjct: 7945187 ccacgccatttcgtcgaacatgtcgtggtcgatgcaggcgacgctccccaggctcacgta 7945128
Query: 720 cagaacggagcgcggcgggcgcgcgtccagccacgccaagcaggtggggtccgg 773
||| ||||||||||||||| |||||||||||||||| | ||||| | |||||||
Sbjct: 7945127 cagcacggagcgcggcgggtgcgcgtccagccacgcgaggcaggcgcggtccgg 7945074
Score = 77.8 bits (39), Expect = 8e-012
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 673 tcgaacacggcgcggtcgacgcgcgccacgctgcccatgctgacgtacagaacggagcgc 732
|||||||| ||||||||| ||||||||||||||| | ||| |||||||| ||||| |||
Sbjct: 8001614 tcgaacacctcgcggtcgatgcgcgccacgctgccgaggctcacgtacagcacggaccgc 8001673
Query: 733 ggcgggcgcgcgtccagccacgc 755
|||| | |||||| |||||||||
Sbjct: 8001674 ggcgagtgcgcgtgcagccacgc 8001696
Score = 58.0 bits (29), Expect = 7e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 462 gtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgcggtgccca 518
||||||||| |||||||||||||| |||| || || |||||| |||||||||||||
Sbjct: 7941255 gtgcgtccaaaacccacccaccgcatggtgagctagcacctccgtctgcggtgccca 7941199
Score = 56.0 bits (28), Expect = 3e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
||||| |||||||||||||||||| | | |||||||||||||||||||||| ||||
Sbjct: 7872130 ttccagccgcagtgcgtccagaacgcggcggtcgccgggtgcgccaggacctcctcctgc 7872071
Query: 511 ggtgccca 518
|| |||||
Sbjct: 7872070 ggcgccca 7872063
Score = 50.1 bits (25), Expect = 0.002
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 445 atggatttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctcc 504
||||| |||||||||||||| ||| |||||| ||||| || | |||||| |||| ||||
Sbjct: 19401426 atggagttccacccgcagtgggtcacgaacccgcccacggcggcgtgcgcgaggatctcc 19401485
Query: 505 ctctgcggtgccc 517
||||||| ||||
Sbjct: 19401486 ttctgcggcgccc 19401498
Score = 48.1 bits (24), Expect = 0.007
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 452 tccacccgcagtgcgtccagaacccacccaccgccgggtgcgccagga 499
||||||| ||||||||| ||||||| ||| |||| ||||||||||||
Sbjct: 5496650 tccacccacagtgcgtcaagaacccgcccgtcgcccggtgcgccagga 5496603
Score = 44.1 bits (22), Expect = 0.11
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 445 atggatttccacccgcagtgcgtccagaacccacccac 482
||||| |||||||||||||||||| |||||| |||||
Sbjct: 19409344 atggagttccacccgcagtgcgtcacgaacccgcccac 19409381
>dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1341_A08
Length = 128955
Score = 143 bits (72), Expect = 2e-031
Identities = 132/152 (86%)
Strand = Plus / Plus
Query: 346 ccgatgccccactggtgcgtcacatacctcgcgttcactatctgctcggcgaagcacggc 405
|||| |||||||||||||||||| |||||||||||||| |||| ||| ||||||| |||
Sbjct: 39483 ccgacgccccactggtgcgtcacgtacctcgcgttcaccgtctggtcgccgaagcatggc 39542
Query: 406 tgcacgagcatgggcaccccttcggatatggcctccaccatggatttccacccgcagtgc 465
||| |||||||||||||||||||| | ||| |||| | | || |||||||||||||||
Sbjct: 39543 tgcgcgagcatgggcaccccttcgcagatgctatccagcgtcgagttccacccgcagtgc 39602
Query: 466 gtccagaacccacccaccgccgggtgcgccag 497
||||||||||| || | |||||||||||||||
Sbjct: 39603 gtccagaacccgccgatcgccgggtgcgccag 39634
Score = 77.8 bits (39), Expect = 8e-012
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 673 tcgaacacggcgcggtcgacgcgcgccacgctgcccatgctgacgtacagaacggagcgc 732
|||||||| ||||||||| ||||||||||||||| | ||| |||||||| ||||| |||
Sbjct: 39811 tcgaacacctcgcggtcgatgcgcgccacgctgccgaggctcacgtacagcacggaccgc 39870
Query: 733 ggcgggcgcgcgtccagccacgc 755
|||| | |||||| |||||||||
Sbjct: 39871 ggcgagtgcgcgtgcagccacgc 39893
>gb|AACV01015542.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015542, whole
genome shotgun sequence
Length = 7352
Score = 143 bits (72), Expect = 2e-031
Identities = 132/152 (86%)
Strand = Plus / Plus
Query: 346 ccgatgccccactggtgcgtcacatacctcgcgttcactatctgctcggcgaagcacggc 405
|||| |||||||||||||||||| |||||||||||||| |||| ||| ||||||| |||
Sbjct: 6386 ccgacgccccactggtgcgtcacgtacctcgcgttcaccgtctggtcgccgaagcatggc 6445
Query: 406 tgcacgagcatgggcaccccttcggatatggcctccaccatggatttccacccgcagtgc 465
||| |||||||||||||||||||| | ||| |||| | | || |||||||||||||||
Sbjct: 6446 tgcgcgagcatgggcaccccttcgcagatgctatccagcgtcgagttccacccgcagtgc 6505
Query: 466 gtccagaacccacccaccgccgggtgcgccag 497
||||||||||| || | |||||||||||||||
Sbjct: 6506 gtccagaacccgccgatcgccgggtgcgccag 6537
Score = 77.8 bits (39), Expect = 8e-012
Identities = 72/83 (86%)
Strand = Plus / Plus
Query: 673 tcgaacacggcgcggtcgacgcgcgccacgctgcccatgctgacgtacagaacggagcgc 732
|||||||| ||||||||| ||||||||||||||| | ||| |||||||| ||||| |||
Sbjct: 6714 tcgaacacctcgcggtcgatgcgcgccacgctgccgaggctcacgtacagcacggaccgc 6773
Query: 733 ggcgggcgcgcgtccagccacgc 755
|||| | |||||| |||||||||
Sbjct: 6774 ggcgagtgcgcgtgcagccacgc 6796
>gb|AC119147.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0027A14, from chromosome 10, complete sequence
Length = 175667
Score = 61.9 bits (31), Expect = 5e-007
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 479 ccaccgccgggtgcgccaggacctccctctgcggtgcccacgccacgatcttgcc 533
||||||||||||||||||| ||| | |||||||||||||||||||| ||||||
Sbjct: 11738 ccaccgccgggtgcgccagcacccgctgctgcggtgcccacgccacgagcttgcc 11792
Score = 46.1 bits (23), Expect = 0.029
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 479 ccaccgccgggtgcgccaggacctccctctgcggtgcccacgccacgatcttgcc 533
||||||||||||| ||||| ||| | |||||| ||||||||||||| ||||||
Sbjct: 5383 ccaccgccgggtgagccagcacccgctgctgcggcgcccacgccacgaccttgcc 5437
>gb|AACV01021222.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021222, whole
genome shotgun sequence
Length = 9467
Score = 61.9 bits (31), Expect = 5e-007
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 479 ccaccgccgggtgcgccaggacctccctctgcggtgcccacgccacgatcttgcc 533
||||||||||||||||||| ||| | |||||||||||||||||||| ||||||
Sbjct: 6223 ccaccgccgggtgcgccagcacccgctgctgcggtgcccacgccacgagcttgcc 6169
>ref|NM_195769.1| Oryza sativa (japonica cultivar-group) putative glucosyltransferase
(OSJNBa0027A14.3), mRNA
Length = 834
Score = 61.9 bits (31), Expect = 5e-007
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 479 ccaccgccgggtgcgccaggacctccctctgcggtgcccacgccacgatcttgcc 533
||||||||||||||||||| ||| | |||||||||||||||||||| ||||||
Sbjct: 541 ccaccgccgggtgcgccagcacccgctgctgcggtgcccacgccacgagcttgcc 487
>ref|NT_080064.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 1671487
Score = 61.9 bits (31), Expect = 5e-007
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 479 ccaccgccgggtgcgccaggacctccctctgcggtgcccacgccacgatcttgcc 533
||||||||||||||||||| ||| | |||||||||||||||||||| ||||||
Sbjct: 1229394 ccaccgccgggtgcgccagcacccgctgctgcggtgcccacgccacgagcttgcc 1229448
Score = 46.1 bits (23), Expect = 0.029
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 479 ccaccgccgggtgcgccaggacctccctctgcggtgcccacgccacgatcttgcc 533
||||||||||||| ||||| ||| | |||||| ||||||||||||| ||||||
Sbjct: 1223039 ccaccgccgggtgagccagcacccgctgctgcggcgcccacgccacgaccttgcc 1223093
Score = 46.1 bits (23), Expect = 0.029
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 479 ccaccgccgggtgcgccaggacctccctctgcggtgcccacgccacgatcttgcc 533
||||||||||||| ||||| ||| | |||||| ||||||||||||| ||||||
Sbjct: 1215507 ccaccgccgggtgagccagcacccgctgctgcggcgcccacgccacgaccttgcc 1215561
>gb|CH401251.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000088 genomic
scaffold, whole genome shotgun sequence
Length = 1117668
Score = 61.9 bits (31), Expect = 5e-007
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 479 ccaccgccgggtgcgccaggacctccctctgcggtgcccacgccacgatcttgcc 533
||||||||||||||||||| ||| | |||||||||||||||||||| ||||||
Sbjct: 1001518 ccaccgccgggtgcgccagcacccgctgctgcggtgcccacgccacgagcttgcc 1001572
Score = 46.1 bits (23), Expect = 0.029
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 479 ccaccgccgggtgcgccaggacctccctctgcggtgcccacgccacgatcttgcc 533
||||||||||||| ||||| ||| | |||||| ||||||||||||| ||||||
Sbjct: 995109 ccaccgccgggtgagccagcacccgctgctgcggcgcccacgccacgaccttgcc 995163
Score = 46.1 bits (23), Expect = 0.029
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 479 ccaccgccgggtgcgccaggacctccctctgcggtgcccacgccacgatcttgcc 533
||||||||||||| ||||| ||| | |||||| ||||||||||||| ||||||
Sbjct: 985676 ccaccgccgggtgagccagcacccgctgctgcggcgcccacgccacgaccttgcc 985730
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 61.9 bits (31), Expect = 5e-007
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 479 ccaccgccgggtgcgccaggacctccctctgcggtgcccacgccacgatcttgcc 533
||||||||||||||||||| ||| | |||||||||||||||||||| ||||||
Sbjct: 8254414 ccaccgccgggtgcgccagcacccgctgctgcggtgcccacgccacgagcttgcc 8254468
Score = 46.1 bits (23), Expect = 0.029
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 479 ccaccgccgggtgcgccaggacctccctctgcggtgcccacgccacgatcttgcc 533
||||||||||||| ||||| ||| | |||||| ||||||||||||| ||||||
Sbjct: 8248005 ccaccgccgggtgagccagcacccgctgctgcggcgcccacgccacgaccttgcc 8248059
Score = 46.1 bits (23), Expect = 0.029
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 479 ccaccgccgggtgcgccaggacctccctctgcggtgcccacgccacgatcttgcc 533
||||||||||||| ||||| ||| | |||||| ||||||||||||| ||||||
Sbjct: 8238572 ccaccgccgggtgagccagcacccgctgctgcggcgcccacgccacgaccttgcc 8238626
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 61.9 bits (31), Expect = 5e-007
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 479 ccaccgccgggtgcgccaggacctccctctgcggtgcccacgccacgatcttgcc 533
||||||||||||||||||| ||| | |||||||||||||||||||| ||||||
Sbjct: 8923515 ccaccgccgggtgcgccagcacccgctgctgcggtgcccacgccacgagcttgcc 8923569
Score = 46.1 bits (23), Expect = 0.029
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 479 ccaccgccgggtgcgccaggacctccctctgcggtgcccacgccacgatcttgcc 533
||||||||||||| ||||| ||| | |||||| ||||||||||||| ||||||
Sbjct: 8917160 ccaccgccgggtgagccagcacccgctgctgcggcgcccacgccacgaccttgcc 8917214
Score = 46.1 bits (23), Expect = 0.029
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 479 ccaccgccgggtgcgccaggacctccctctgcggtgcccacgccacgatcttgcc 533
||||||||||||| ||||| ||| | |||||| ||||||||||||| ||||||
Sbjct: 8909628 ccaccgccgggtgagccagcacccgctgctgcggcgcccacgccacgaccttgcc 8909682
Score = 42.1 bits (21), Expect = 0.45
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 457 ccgcagtgcgtccagaacccacccaccgccgggtgcgccag 497
|||||||||||| ||||| | |||||||| | |||||||||
Sbjct: 1385857 ccgcagtgcgtcaagaacgcgcccaccgcggcgtgcgccag 1385817
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 61.9 bits (31), Expect = 5e-007
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 479 ccaccgccgggtgcgccaggacctccctctgcggtgcccacgccacgatcttgcc 533
||||||||||||||||||| ||| | |||||||||||||||||||| ||||||
Sbjct: 8928654 ccaccgccgggtgcgccagcacccgctgctgcggtgcccacgccacgagcttgcc 8928708
Score = 46.1 bits (23), Expect = 0.029
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 479 ccaccgccgggtgcgccaggacctccctctgcggtgcccacgccacgatcttgcc 533
||||||||||||| ||||| ||| | |||||| ||||||||||||| ||||||
Sbjct: 8922299 ccaccgccgggtgagccagcacccgctgctgcggcgcccacgccacgaccttgcc 8922353
Score = 46.1 bits (23), Expect = 0.029
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 479 ccaccgccgggtgcgccaggacctccctctgcggtgcccacgccacgatcttgcc 533
||||||||||||| ||||| ||| | |||||| ||||||||||||| ||||||
Sbjct: 8914767 ccaccgccgggtgagccagcacccgctgctgcggcgcccacgccacgaccttgcc 8914821
Score = 42.1 bits (21), Expect = 0.45
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 457 ccgcagtgcgtccagaacccacccaccgccgggtgcgccag 497
|||||||||||| ||||| | |||||||| | |||||||||
Sbjct: 1385854 ccgcagtgcgtcaagaacgcgcccaccgcggcgtgcgccag 1385814
>dbj|AK071819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114N14, full
insert sequence
Length = 1727
Score = 60.0 bits (30), Expect = 2e-006
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
|||||||||||||||||| ||| || |||||||||| ||||||||| || || | ||||
Sbjct: 1185 ttccacccgcagtgcgtcacgaagccgcccaccgccgcgtgcgccagcacgtcgcgctgc 1126
Query: 511 ggtgcccacg 520
|| |||||||
Sbjct: 1125 ggcgcccacg 1116
>gb|AACV01002157.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002157, whole
genome shotgun sequence
Length = 8100
Score = 60.0 bits (30), Expect = 2e-006
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
|||||||||||||||||| ||| || |||||||||| ||||||||| || || | ||||
Sbjct: 3414 ttccacccgcagtgcgtcacgaagccgcccaccgccgcgtgcgccagcacgtcgcgctgc 3473
Query: 511 ggtgcccacg 520
|| |||||||
Sbjct: 3474 ggcgcccacg 3483
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 60.0 bits (30), Expect = 2e-006
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
|||||||||||||||||| ||| || |||||||||| ||||||||| || || | ||||
Sbjct: 28922463 ttccacccgcagtgcgtcacgaagccgcccaccgccgcgtgcgccagcacgtcgcgctgc 28922522
Query: 511 ggtgcccacg 520
|| |||||||
Sbjct: 28922523 ggcgcccacg 28922532
Score = 44.1 bits (22), Expect = 0.11
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgc 492
|||||||||||||||||| ||| | |||||||||||||||
Sbjct: 4150292 ttccacccgcagtgcgtcacgaagcaccccaccgccgggtgc 4150333
Score = 42.1 bits (21), Expect = 0.45
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 730 cgcggcgggcgcgcgtccagccacgccaagcag 762
|||||||| |||||||||||||||||| ||||
Sbjct: 28378040 cgcggcggctgcgcgtccagccacgccacgcag 28378008
Score = 42.1 bits (21), Expect = 0.45
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtg 491
|||||||||||||||||| |||||| || || ||||||||
Sbjct: 25673595 ttccacccgcagtgcgtcacgaacccgccgacggccgggtg 25673555
Score = 42.1 bits (21), Expect = 0.45
Identities = 57/69 (82%)
Strand = Plus / Plus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
|||||||||||||||| | ||||||| ||||| || |||| |||||||||| ||||
Sbjct: 24787320 ttccacccgcagtgcgacaagaaccctcccacggcgcggtggttcaggacctccacctgc 24787379
Query: 511 ggtgcccac 519
|| ||||||
Sbjct: 24787380 ggcgcccac 24787388
>ref|XM_463421.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1455
Score = 60.0 bits (30), Expect = 2e-006
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
|||||||||||||||||| ||| || |||||||||| ||||||||| || || | ||||
Sbjct: 1124 ttccacccgcagtgcgtcacgaagccgcccaccgccgcgtgcgccagcacgtcgcgctgc 1065
Query: 511 ggtgcccacg 520
|| |||||||
Sbjct: 1064 ggcgcccacg 1055
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 60.0 bits (30), Expect = 2e-006
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
|||||||||||||||||| ||| || |||||||||| ||||||||| || || | ||||
Sbjct: 3369846 ttccacccgcagtgcgtcacgaagccgcccaccgccgcgtgcgccagcacgtcgcgctgc 3369905
Query: 511 ggtgcccacg 520
|| |||||||
Sbjct: 3369906 ggcgcccacg 3369915
Score = 42.1 bits (21), Expect = 0.45
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 730 cgcggcgggcgcgcgtccagccacgccaagcag 762
|||||||| |||||||||||||||||| ||||
Sbjct: 2825423 cgcggcggctgcgcgtccagccacgccacgcag 2825391
Score = 42.1 bits (21), Expect = 0.45
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtg 491
|||||||||||||||||| |||||| || || ||||||||
Sbjct: 120978 ttccacccgcagtgcgtcacgaacccgccgacggccgggtg 120938
>dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OJ1116_H09
Length = 110086
Score = 60.0 bits (30), Expect = 2e-006
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
|||||||||||||||||| ||| || |||||||||| ||||||||| || || | ||||
Sbjct: 59836 ttccacccgcagtgcgtcacgaagccgcccaccgccgcgtgcgccagcacgtcgcgctgc 59895
Query: 511 ggtgcccacg 520
|| |||||||
Sbjct: 59896 ggcgcccacg 59905
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 60.0 bits (30), Expect = 2e-006
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
|||||||||||||||||| ||| || |||||||||| ||||||||| || || | ||||
Sbjct: 3301687 ttccacccgcagtgcgtcacgaagccgcccaccgccgcgtgcgccagcacgtcgcgctgc 3301746
Query: 511 ggtgcccacg 520
|| |||||||
Sbjct: 3301747 ggcgcccacg 3301756
Score = 42.1 bits (21), Expect = 0.45
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 730 cgcggcgggcgcgcgtccagccacgccaagcag 762
|||||||| |||||||||||||||||| ||||
Sbjct: 2758488 cgcggcggctgcgcgtccagccacgccacgcag 2758456
Score = 42.1 bits (21), Expect = 0.45
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtg 491
|||||||||||||||||| |||||| || || ||||||||
Sbjct: 140655 ttccacccgcagtgcgtcacgaacccgccgacggccgggtg 140615
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 60.0 bits (30), Expect = 2e-006
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
|||||||||||||||||| ||| || |||||||||| ||||||||| || || | ||||
Sbjct: 28503408 ttccacccgcagtgcgtcacgaagccgcccaccgccgcgtgcgccagcacgtcgcgctgc 28503467
Query: 511 ggtgcccacg 520
|| |||||||
Sbjct: 28503468 ggcgcccacg 28503477
Score = 44.1 bits (22), Expect = 0.11
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgc 492
|||||||||||||||||| ||| | |||||||||||||||
Sbjct: 4190015 ttccacccgcagtgcgtcacgaagcaccccaccgccgggtgc 4190056
Score = 42.1 bits (21), Expect = 0.45
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 730 cgcggcgggcgcgcgtccagccacgccaagcag 762
|||||||| |||||||||||||||||| ||||
Sbjct: 27960209 cgcggcggctgcgcgtccagccacgccacgcag 27960177
Score = 42.1 bits (21), Expect = 0.45
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtg 491
|||||||||||||||||| |||||| || || ||||||||
Sbjct: 25342376 ttccacccgcagtgcgtcacgaacccgccgacggccgggtg 25342336
Score = 42.1 bits (21), Expect = 0.45
Identities = 57/69 (82%)
Strand = Plus / Plus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
|||||||||||||||| | ||||||| ||||| || |||| |||||||||| ||||
Sbjct: 24320261 ttccacccgcagtgcgacaagaaccctcccacggcgcggtggttcaggacctccacctgc 24320320
Query: 511 ggtgcccac 519
|| ||||||
Sbjct: 24320321 ggcgcccac 24320329
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 60.0 bits (30), Expect = 2e-006
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
|||||||||||||||||| ||| || |||||||||| ||||||||| || || | ||||
Sbjct: 28841793 ttccacccgcagtgcgtcacgaagccgcccaccgccgcgtgcgccagcacgtcgcgctgc 28841852
Query: 511 ggtgcccacg 520
|| |||||||
Sbjct: 28841853 ggcgcccacg 28841862
Score = 44.1 bits (22), Expect = 0.11
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgc 492
|||||||||||||||||| ||| | |||||||||||||||
Sbjct: 4152490 ttccacccgcagtgcgtcacgaagcaccccaccgccgggtgc 4152531
Score = 42.1 bits (21), Expect = 0.45
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 730 cgcggcgggcgcgcgtccagccacgccaagcag 762
|||||||| |||||||||||||||||| ||||
Sbjct: 28297370 cgcggcggctgcgcgtccagccacgccacgcag 28297338
Score = 42.1 bits (21), Expect = 0.45
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtg 491
|||||||||||||||||| |||||| || || ||||||||
Sbjct: 25593375 ttccacccgcagtgcgtcacgaacccgccgacggccgggtg 25593335
Score = 42.1 bits (21), Expect = 0.45
Identities = 57/69 (82%)
Strand = Plus / Plus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
|||||||||||||||| | ||||||| ||||| || |||| |||||||||| ||||
Sbjct: 24708603 ttccacccgcagtgcgacaagaaccctcccacggcgcggtggttcaggacctccacctgc 24708662
Query: 511 ggtgcccac 519
|| ||||||
Sbjct: 24708663 ggcgcccac 24708671
>ref|NM_186798.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1392
Score = 58.0 bits (29), Expect = 7e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 462 gtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgcggtgccca 518
||||||||| |||||||||||||| |||| || || |||||| |||||||||||||
Sbjct: 1083 gtgcgtccaaaacccacccaccgcatggtgagctagcacctccgtctgcggtgccca 1027
>gb|CB659047.1|CB659047 OSJNEc15K11.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc15K11 5', mRNA sequence
Length = 776
Score = 56.0 bits (28), Expect = 3e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
||||| |||||||||||||||||| | | |||||||||||||||||||||| ||||
Sbjct: 734 ttccagccgcagtgcgtccagaacgcggcggtcgccgggtgcgccaggacctcctcctgc 675
Query: 511 ggtgccca 518
|| |||||
Sbjct: 674 ggcgccca 667
>dbj|AP004340.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0523A04
Length = 149049
Score = 56.0 bits (28), Expect = 3e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
||||| |||||||||||||||||| | | |||||||||||||||||||||| ||||
Sbjct: 121128 ttccagccgcagtgcgtccagaacgcggcggtcgccgggtgcgccaggacctcctcctgc 121069
Query: 511 ggtgccca 518
|| |||||
Sbjct: 121068 ggcgccca 121061
>gb|AACV01015535.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015535, whole
genome shotgun sequence
Length = 39781
Score = 56.0 bits (28), Expect = 3e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
||||| |||||||||||||||||| | | |||||||||||||||||||||| ||||
Sbjct: 11182 ttccagccgcagtgcgtccagaacgcggcggtcgccgggtgcgccaggacctcctcctgc 11123
Query: 511 ggtgccca 518
|| |||||
Sbjct: 11122 ggcgccca 11115
>ref|NM_186788.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1440
Score = 56.0 bits (28), Expect = 3e-005
Identities = 58/68 (85%)
Strand = Plus / Minus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
||||| |||||||||||||||||| | | |||||||||||||||||||||| ||||
Sbjct: 1133 ttccagccgcagtgcgtccagaacgcggcggtcgccgggtgcgccaggacctcctcctgc 1074
Query: 511 ggtgccca 518
|| |||||
Sbjct: 1073 ggcgccca 1066
>gb|AQ688115.1|AQ688115 nbxb0077A12r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0077A12r, DNA sequence
Length = 602
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 625 acccacaggaacggcacgccgctgccggccagcgcccacgccgtctc 671
||||| ||||| ||||||||||||||||| | | |||||||||||||
Sbjct: 225 acccagaggaatggcacgccgctgccggcgatcccccacgccgtctc 271
>gb|CB651523.1|CB651523 OSJNEb16I07.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb16I07 3', mRNA sequence
Length = 765
Score = 54.0 bits (27), Expect = 1e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 723 aacggagcgcggcgggcgcgcgtccagccacgcca 757
|||||||||||||||| ||||| ||||||||||||
Sbjct: 715 aacggagcgcggcgggtgcgcgcccagccacgcca 749
>gb|CB661740.1|CB661740 OSJNEd05A15.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05A15 3', mRNA sequence
Length = 752
Score = 54.0 bits (27), Expect = 1e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 723 aacggagcgcggcgggcgcgcgtccagccacgcca 757
|||||||||||||||| ||||| ||||||||||||
Sbjct: 707 aacggagcgcggcgggtgcgcgcccagccacgcca 741
>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence,
complete sequence
Length = 143205
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 625 acccacaggaacggcacgccgctgccggccagcgcccacgccgtctc 671
||||| ||||| ||||||||||||||||| | | |||||||||||||
Sbjct: 923 acccagaggaatggcacgccgctgccggcgatcccccacgccgtctc 969
>gb|AACV01008189.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg008189, whole
genome shotgun sequence
Length = 44992
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 625 acccacaggaacggcacgccgctgccggccagcgcccacgccgtctc 671
||||| ||||| ||||||||||||||||| | | |||||||||||||
Sbjct: 25257 acccagaggaatggcacgccgctgccggcgatcccccacgccgtctc 25303
>ref|NM_185146.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1413
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 625 acccacaggaacggcacgccgctgccggccagcgcccacgccgtctc 671
||||| ||||| ||||||||||||||||| | | |||||||||||||
Sbjct: 935 acccagaggaatggcacgccgctgccggcgatcccccacgccgtctc 889
>ref|NT_107188.1| Oryza sativa (japonica cultivar-group)
Length = 1363716
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 625 acccacaggaacggcacgccgctgccggccagcgcccacgccgtctc 671
||||| ||||| ||||||||||||||||| | | |||||||||||||
Sbjct: 991272 acccagaggaatggcacgccgctgccggcgatcccccacgccgtctc 991226
Score = 42.1 bits (21), Expect = 0.45
Identities = 57/69 (82%)
Strand = Plus / Minus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
|||||||||||||| ||| |||| | ||||||| |||||| ||||| ||| || ||||
Sbjct: 141550 ttccacccgcagtgggtcacgaacgcgcccaccgacgggtgggccagcaccgccagctgc 141491
Query: 511 ggtgcccac 519
|| ||||||
Sbjct: 141490 ggggcccac 141482
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 625 acccacaggaacggcacgccgctgccggccagcgcccacgccgtctc 671
||||| ||||| ||||||||||||||||| | | |||||||||||||
Sbjct: 8036122 acccagaggaatggcacgccgctgccggcgatcccccacgccgtctc 8036076
Score = 42.1 bits (21), Expect = 0.45
Identities = 57/69 (82%)
Strand = Plus / Minus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
|||||||||||||| ||| |||| | ||||||| |||||| ||||| ||| || ||||
Sbjct: 7202379 ttccacccgcagtgggtcacgaacgcgcccaccgacgggtgggccagcaccgccagctgc 7202320
Query: 511 ggtgcccac 519
|| ||||||
Sbjct: 7202319 ggggcccac 7202311
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 625 acccacaggaacggcacgccgctgccggccagcgcccacgccgtctc 671
||||| ||||| ||||||||||||||||| | | |||||||||||||
Sbjct: 35302285 acccagaggaatggcacgccgctgccggcgatcccccacgccgtctc 35302239
Score = 52.0 bits (26), Expect = 5e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 715 acgtacagaacggagcgcggcgggcgcgcgtccagcca 752
|||||||| | ||||||||||||| |||||||||||||
Sbjct: 21995658 acgtacagcatggagcgcggcgggtgcgcgtccagcca 21995621
Score = 42.1 bits (21), Expect = 0.45
Identities = 57/69 (82%)
Strand = Plus / Minus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
|||||||||||||| ||| |||| | ||||||| |||||| ||||| ||| || ||||
Sbjct: 34468542 ttccacccgcagtgggtcacgaacgcgcccaccgacgggtgggccagcaccgccagctgc 34468483
Query: 511 ggtgcccac 519
|| ||||||
Sbjct: 34468482 ggggcccac 34468474
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 625 acccacaggaacggcacgccgctgccggccagcgcccacgccgtctc 671
||||| ||||| ||||||||||||||||| | | |||||||||||||
Sbjct: 34424547 acccagaggaatggcacgccgctgccggcgatcccccacgccgtctc 34424501
Score = 52.0 bits (26), Expect = 5e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 715 acgtacagaacggagcgcggcgggcgcgcgtccagcca 752
|||||||| | ||||||||||||| |||||||||||||
Sbjct: 21421539 acgtacagcatggagcgcggcgggtgcgcgtccagcca 21421502
Score = 42.1 bits (21), Expect = 0.45
Identities = 57/69 (82%)
Strand = Plus / Minus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
|||||||||||||| ||| |||| | ||||||| |||||| ||||| ||| || ||||
Sbjct: 33575615 ttccacccgcagtgggtcacgaacgcgcccaccgacgggtgggccagcaccgccagctgc 33575556
Query: 511 ggtgcccac 519
|| ||||||
Sbjct: 33575555 ggggcccac 33575547
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 54.0 bits (27), Expect = 1e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 625 acccacaggaacggcacgccgctgccggccagcgcccacgccgtctc 671
||||| ||||| ||||||||||||||||| | | |||||||||||||
Sbjct: 34334075 acccagaggaatggcacgccgctgccggcgatcccccacgccgtctc 34334029
Score = 52.0 bits (26), Expect = 5e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 715 acgtacagaacggagcgcggcgggcgcgcgtccagcca 752
|||||||| | ||||||||||||| |||||||||||||
Sbjct: 21428510 acgtacagcatggagcgcggcgggtgcgcgtccagcca 21428473
Score = 42.1 bits (21), Expect = 0.45
Identities = 57/69 (82%)
Strand = Plus / Minus
Query: 451 ttccacccgcagtgcgtccagaacccacccaccgccgggtgcgccaggacctccctctgc 510
|||||||||||||| ||| |||| | ||||||| |||||| ||||| ||| || ||||
Sbjct: 33485143 ttccacccgcagtgggtcacgaacgcgcccaccgacgggtgggccagcaccgccagctgc 33485084
Query: 511 ggtgcccac 519
|| ||||||
Sbjct: 33485083 ggggcccac 33485075
>gb|CB643291.1|CB643291 OSJNEb03O11.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03O11 5', mRNA sequence
Length = 778
Score = 52.0 bits (26), Expect = 5e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 724 acggagcgcggcgggcgcgcgtccagccacgcca 757
||||||||||||||| ||||| ||||||||||||
Sbjct: 678 acggagcgcggcgggtgcgcgcccagccacgcca 711
>gb|CB643653.1|CB643653 OSJNEb04H10.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb04H10 3', mRNA sequence
Length = 800
Score = 52.0 bits (26), Expect = 5e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 724 acggagcgcggcgggcgcgcgtccagccacgcca 757
||||||||||||||| ||||| ||||||||||||
Sbjct: 762 acggagcgcggcgggtgcgcgcccagccacgcca 795
>gb|CB643719.1|CB643719 OSJNEb04J03.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb04J03 3', mRNA sequence
Length = 755
Score = 52.0 bits (26), Expect = 5e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 724 acggagcgcggcgggcgcgcgtccagccacgcca 757
||||||||||||||| ||||| ||||||||||||
Sbjct: 674 acggagcgcggcgggtgcgcgcccagccacgcca 707
>gb|CB643721.1|CB643721 OSJNEb04J04.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb04J04 3', mRNA sequence
Length = 755
Score = 52.0 bits (26), Expect = 5e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 724 acggagcgcggcgggcgcgcgtccagccacgcca 757
||||||||||||||| ||||| ||||||||||||
Sbjct: 674 acggagcgcggcgggtgcgcgcccagccacgcca 707
>gb|CB657828.1|CB657828 OSJNEc13H06.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc13H06 5', mRNA sequence
Length = 811
Score = 52.0 bits (26), Expect = 5e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 724 acggagcgcggcgggcgcgcgtccagccacgcca 757
||||||||||||||| ||||| ||||||||||||
Sbjct: 195 acggagcgcggcgggtgcgcgcccagccacgcca 162
>gb|CB657829.1|CB657829 OSJNEc13H06.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc13H06 3', mRNA sequence
Length = 785
Score = 52.0 bits (26), Expect = 5e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 724 acggagcgcggcgggcgcgcgtccagccacgcca 757
||||||||||||||| ||||| ||||||||||||
Sbjct: 704 acggagcgcggcgggtgcgcgcccagccacgcca 737
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,251,041
Number of Sequences: 438736
Number of extensions: 1251041
Number of successful extensions: 9343
Number of sequences better than 0.5: 218
Number of HSP's better than 0.5 without gapping: 235
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 7485
Number of HSP's gapped (non-prelim): 1860
length of query: 785
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 764
effective length of database: 2,791,206,460
effective search space: 2132481735440
effective search space used: 2132481735440
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)