BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2485885.2.1
(1063 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB645026.1|CB645026 OSJNEb06H20.r OSJNEb Oryza sativa (j... 192 3e-046
dbj|AK065987.1| Oryza sativa (japonica cultivar-group) cDNA... 192 3e-046
dbj|AK105912.1| Oryza sativa (japonica cultivar-group) cDNA... 192 3e-046
dbj|AK119544.1| Oryza sativa (japonica cultivar-group) cDNA... 192 3e-046
gb|AACV01016342.1| Oryza sativa (japonica cultivar-group) c... 192 3e-046
ref|XM_478346.1| Oryza sativa (japonica cultivar-group), mRNA 192 3e-046
ref|XM_506362.1| PREDICTED Oryza sativa (japonica cultivar-... 192 3e-046
dbj|AP005185.4| Oryza sativa (japonica cultivar-group) geno... 192 3e-046
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 192 3e-046
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 192 3e-046
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 192 3e-046
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 192 3e-046
dbj|AK059016.1| Oryza sativa (japonica cultivar-group) cDNA... 180 1e-042
dbj|AK067710.1| Oryza sativa (japonica cultivar-group) cDNA... 180 1e-042
dbj|AP005186.4| Oryza sativa (japonica cultivar-group) geno... 180 1e-042
gb|AACV01016313.1| Oryza sativa (japonica cultivar-group) c... 180 1e-042
ref|XM_478280.1| Oryza sativa (japonica cultivar-group), mRNA 180 1e-042
dbj|AK068586.1| Oryza sativa (japonica cultivar-group) cDNA... 161 1e-036
dbj|AK105478.1| Oryza sativa (japonica cultivar-group) cDNA... 161 1e-036
ref|XM_478348.1| Oryza sativa (japonica cultivar-group), mRNA 161 1e-036
ref|XM_478349.1| Oryza sativa (japonica cultivar-group), mRNA 161 1e-036
dbj|AK105261.1| Oryza sativa (japonica cultivar-group) cDNA... 153 2e-034
gb|AACV01016314.1| Oryza sativa (japonica cultivar-group) c... 153 2e-034
ref|XM_478285.1| Oryza sativa (japonica cultivar-group), mRNA 153 2e-034
gb|CB637106.1|CB637106 OSJNEa03E20.r OSJNEa Oryza sativa (j... 145 6e-032
dbj|AP004400.1| Oryza sativa (japonica cultivar-group) chro... 137 1e-029
dbj|AK064324.1| Oryza sativa (japonica cultivar-group) cDNA... 137 1e-029
dbj|AK099344.1| Oryza sativa (japonica cultivar-group) cDNA... 137 1e-029
dbj|AK101518.1| Oryza sativa (japonica cultivar-group) cDNA... 137 1e-029
dbj|AK105785.1| Oryza sativa (japonica cultivar-group) cDNA... 137 1e-029
dbj|AK106005.1| Oryza sativa (japonica cultivar-group) cDNA... 137 1e-029
ref|XM_478277.1| Oryza sativa (japonica cultivar-group), mRNA 137 1e-029
ref|XM_478278.1| Oryza sativa (japonica cultivar-group), mRNA 137 1e-029
ref|XM_506356.1| PREDICTED Oryza sativa (japonica cultivar-... 137 1e-029
ref|XM_506357.2| PREDICTED Oryza sativa (japonica cultivar-... 137 1e-029
ref|XM_507364.1| PREDICTED Oryza sativa (japonica cultivar-... 137 1e-029
gb|AACV01016311.1| Oryza sativa (japonica cultivar-group) c... 127 1e-026
ref|XM_478273.1| Oryza sativa (japonica cultivar-group), mRNA 127 1e-026
gb|AC093094.3| Oryza sativa (japonica cultivar-group) chrom... 105 5e-020
dbj|AK107291.1| Oryza sativa (japonica cultivar-group) cDNA... 105 5e-020
dbj|AP003705.3| Oryza sativa (japonica cultivar-group) geno... 105 5e-020
dbj|AP005296.5| Oryza sativa (japonica cultivar-group) geno... 105 5e-020
gb|AACV01016586.1| Oryza sativa (japonica cultivar-group) c... 105 5e-020
ref|NM_186324.2| Oryza sativa (japonica cultivar-group), mRNA 105 5e-020
gb|AU096467.1|AU096467 AU096467 Rice green shoot Oryza sati... 101 8e-019
gb|CB683695.1|CB683695 OSJNEf12G22.f OSJNEf Oryza sativa (j... 64 2e-007
gb|CB637626.1|CB637626 OSJNEa04J02.r OSJNEa Oryza sativa (j... 62 7e-007
gb|CB646078.1|CB646078 OSJNEb08E05.r OSJNEb Oryza sativa (j... 62 7e-007
gb|CB655822.1|CB655822 OSJNEc09J11.f OSJNEc Oryza sativa (j... 62 7e-007
gb|CB655823.1|CB655823 OSJNEc09J11.r OSJNEc Oryza sativa (j... 62 7e-007
gb|CB666716.1|CB666716 OSJNEd13L14.r OSJNEd Oryza sativa (j... 62 7e-007
gb|CB671618.1|CB671618 OSJNEe05E12.r OSJNEe Oryza sativa (j... 62 7e-007
gb|CB679495.1|CB679495 OSJNEf03B04.r OSJNEf Oryza sativa (j... 62 7e-007
gb|CB679818.1|CB679818 OSJNEf03M17.r OSJNEf Oryza sativa (j... 62 7e-007
gb|CB680688.1|CB680688 OSJNEf05N23.f OSJNEf Oryza sativa (j... 62 7e-007
gb|CB680689.1|CB680689 OSJNEf05N23.r OSJNEf Oryza sativa (j... 62 7e-007
gb|AF527714.1|AF527714 AF527714 Oryza sativa (japonica cult... 62 7e-007
dbj|AK100744.1| Oryza sativa (japonica cultivar-group) cDNA... 62 7e-007
gb|AC118347.2| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
gb|AC136842.2| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
ref|NT_107132.1| Oryza sativa (japonica cultivar-group) 62 7e-007
gb|AACV01023525.1| Oryza sativa (japonica cultivar-group) c... 62 7e-007
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 62 7e-007
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
gb|AU077934.1|AU077934 AU077934 Rice callus Oryza sativa (j... 60 3e-006
gb|CB645025.1|CB645025 OSJNEb06H20.f OSJNEb Oryza sativa (j... 60 3e-006
gb|CB647449.1|CB647449 OSJNEb10G04.r OSJNEb Oryza sativa (j... 60 3e-006
gb|CB683255.1|CB683255 OSJNEf11G13.r OSJNEf Oryza sativa (j... 60 3e-006
ref|NT_107075.1| Oryza sativa (japonica cultivar-group) 60 3e-006
gb|AACV01020393.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
dbj|AP006173.3| Oryza sativa (japonica cultivar-group) geno... 60 3e-006
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 60 3e-006
dbj|AP003941.1| Oryza sativa (japonica cultivar-group) chro... 58 1e-005
dbj|AP004327.1| Oryza sativa (japonica cultivar-group) chro... 58 1e-005
dbj|AK062590.1| Oryza sativa (japonica cultivar-group) cDNA... 58 1e-005
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 58 1e-005
gb|AACV01014458.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
dbj|AP003617.3| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
dbj|AP004571.3| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
gb|C27424.1|C27424 C27424 Rice callus cDNA Oryza sativa (ja... 54 2e-004
gb|CB662806.1|CB662806 OSJNEd07C18.f OSJNEd Oryza sativa (j... 54 2e-004
gb|AQ916649.1|AQ916649 nbeb0066N22r CUGI Rice BAC Library (... 52 6e-004
dbj|AK109457.1| Oryza sativa (japonica cultivar-group) cDNA... 52 6e-004
dbj|AP004557.3| Oryza sativa (japonica cultivar-group) geno... 52 6e-004
dbj|AP004620.3| Oryza sativa (japonica cultivar-group) geno... 52 6e-004
gb|AACV01002128.1| Oryza sativa (japonica cultivar-group) c... 52 6e-004
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 52 6e-004
ref|NM_192094.1| Oryza sativa (japonica cultivar-group), p... 52 6e-004
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 52 6e-004
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 52 6e-004
dbj|AP003455.2| Oryza sativa (japonica cultivar-group) geno... 52 6e-004
dbj|AP003452.3| Oryza sativa (japonica cultivar-group) geno... 52 6e-004
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 52 6e-004
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 52 6e-004
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 52 6e-004
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 52 6e-004
gb|AC109596.3| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|AC108499.3| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|AACV01012608.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
ref|NT_107218.1| Oryza sativa (japonica cultivar-group) 50 0.002
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 50 0.002
gb|AU055875.1|AU055875 AU055875 Oryza sativa mature leaf Ni... 48 0.010
gb|CV728477.1|CV728477 COLD--01-J03.b1 Cold treated rice le... 48 0.010
gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 ... 48 0.010
dbj|AP005917.2| Oryza sativa (japonica cultivar-group) geno... 48 0.010
gb|AACV01003586.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|AACV01007694.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
ref|XM_469348.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.010
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 48 0.010
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 48 0.010
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.010
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.010
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.010
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.010
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 48 0.010
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 48 0.010
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.010
gb|AU055724.1|AU055724 AU055724 Oryza sativa mature leaf Ni... 46 0.039
gb|CB646298.1|CB646298 OSJNEb08K19.f OSJNEb Oryza sativa (j... 46 0.039
gb|CB646316.1|CB646316 OSJNEb08L08.r OSJNEb Oryza sativa (j... 46 0.039
gb|CB671580.1|CB671580 OSJNEe05D17.r OSJNEe Oryza sativa (j... 46 0.039
gb|CB679494.1|CB679494 OSJNEf03B04.f OSJNEf Oryza sativa (j... 46 0.039
dbj|AK068878.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.039
dbj|AK071819.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.039
dbj|AK105236.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.039
gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-grou... 46 0.039
gb|AACV01002157.1| Oryza sativa (japonica cultivar-group) c... 46 0.039
gb|AACV01005042.1| Oryza sativa (japonica cultivar-group) c... 46 0.039
gb|AACV01021651.1| Oryza sativa (japonica cultivar-group) c... 46 0.039
ref|NM_196703.1| Oryza sativa (japonica cultivar-group) put... 46 0.039
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 46 0.039
ref|XM_463421.1| Oryza sativa (japonica cultivar-group), p... 46 0.039
ref|XM_464391.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.039
ref|NT_107177.1| Oryza sativa (japonica cultivar-group) 46 0.039
dbj|AP004046.2| Oryza sativa (japonica cultivar-group) geno... 46 0.039
dbj|AP003373.3| Oryza sativa (japonica cultivar-group) geno... 46 0.039
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.039
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.039
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.039
gb|AC158405.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.039
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 46 0.039
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.039
gb|AQ866659.1|AQ866659 nbeb0028P11f CUGI Rice BAC Library (... 44 0.15
gb|AZ047464.1|AZ047464 nbeb0094M23f CUGI Rice BAC Library (... 44 0.15
gb|AZ131490.1|AZ131490 OSJNBb0111A07f CUGI Rice BAC Library... 44 0.15
dbj|AP004686.1| Oryza sativa (japonica cultivar-group) chro... 44 0.15
dbj|AK108674.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AP004192.3| Oryza sativa (japonica cultivar-group) geno... 44 0.15
dbj|AP005004.3| Oryza sativa (japonica cultivar-group) geno... 44 0.15
gb|AC129717.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
gb|AACV01003718.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01004995.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01012676.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01018756.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01018758.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
ref|XM_466915.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.15
ref|XM_483068.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.15
ref|XM_483075.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.15
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 44 0.15
ref|NT_107220.1| Oryza sativa (japonica cultivar-group) 44 0.15
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
>gb|CB645026.1|CB645026 OSJNEb06H20.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb06H20 3', mRNA sequence
Length = 809
Score = 192 bits (97), Expect = 3e-046
Identities = 235/281 (83%)
Strand = Plus / Minus
Query: 319 ttcttggcgaggacgaaggatagagggctcgtgtggcctaccaaggcgccgcagaaggag 378
||||||| |||||| |||| || |||||||||||||| || ||||||||||||||||
Sbjct: 641 ttcttggagaggaccaaggggagggggctcgtgtggccgacgcgggcgccgcagaaggag 582
Query: 379 atactcgcccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctc 438
|| ||||| |||||||||||||| || ||||| || ||||| || |||||||| ||||
Sbjct: 581 atcctcgcgcacgccgccgtgggcgggttcgtgacccactgcgggtggaactccatcctg 522
Query: 439 gagagcctctggcatggcgtgccgatggtgccatggccgcttggcgccgagcagcactac 498
|||||||||||| ||||||||| || ||||||||||||| | |||||||||||||| |
Sbjct: 521 gagagcctctggttcggcgtgccggtgctgccatggccgctcgacgccgagcagcacttc 462
Query: 499 aacgcgttcacgctggtggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaag 558
||||||||||| ||||| ||| || |||||||||||||| |||| | |||| |||| |
Sbjct: 461 aacgcgttcaccctggtcgcccacctgggcgtcgccgtgccgctcggcatggacaggagg 402
Query: 559 aggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|| | || |||||||||||| | ||||||||||| |||||
Sbjct: 401 cgggacaacttcgtggaggcggcggagctggagcgcgcggt 361
>dbj|AK065987.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044P16, full
insert sequence
Length = 1599
Score = 192 bits (97), Expect = 3e-046
Identities = 235/281 (83%)
Strand = Plus / Plus
Query: 319 ttcttggcgaggacgaaggatagagggctcgtgtggcctaccaaggcgccgcagaaggag 378
||||||| |||||| |||| || |||||||||||||| || ||||||||||||||||
Sbjct: 1005 ttcttggagaggaccaaggggagggggctcgtgtggccgacgcgggcgccgcagaaggag 1064
Query: 379 atactcgcccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctc 438
|| ||||| |||||||||||||| || ||||| || ||||| || |||||||| ||||
Sbjct: 1065 atcctcgcgcacgccgccgtgggcgggttcgtgacccactgcgggtggaactccatcctg 1124
Query: 439 gagagcctctggcatggcgtgccgatggtgccatggccgcttggcgccgagcagcactac 498
|||||||||||| ||||||||| || ||||||||||||| | |||||||||||||| |
Sbjct: 1125 gagagcctctggttcggcgtgccggtgctgccatggccgctcgacgccgagcagcacttc 1184
Query: 499 aacgcgttcacgctggtggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaag 558
||||||||||| ||||| ||| || |||||||||||||| |||| | |||| |||| |
Sbjct: 1185 aacgcgttcaccctggtcgcccacctgggcgtcgccgtgccgctcggcatggacaggagg 1244
Query: 559 aggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|| | || |||||||||||| | ||||||||||| |||||
Sbjct: 1245 cgggacaacttcgtggaggcggcggagctggagcgcgcggt 1285
Score = 99.6 bits (50), Expect = 3e-018
Identities = 136/165 (82%)
Strand = Plus / Plus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
|||||||||||||| ||||||||||| || ||||| || || |||||||| |||||||
Sbjct: 678 gccatcgccgacggccggtgcacgcgcggggtccccgcgccgacggtgtacacgatcggc 737
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
|||||| || ||| | | ||||| | ||| ||||| |||| ||||||||||| ||||||
Sbjct: 738 ccggtgctctccttccccccgccgccggaggagcagccgcacgagtgcgtgcggtggctc 797
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagc 168
||| ||||||| ||| |||||| | ||||| ||||||||||||
Sbjct: 798 gacgcgcagcccccggcgtccgtgctcttcctctgcttcggcagc 842
>dbj|AK105912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-G12, full
insert sequence
Length = 1645
Score = 192 bits (97), Expect = 3e-046
Identities = 235/281 (83%)
Strand = Plus / Plus
Query: 319 ttcttggcgaggacgaaggatagagggctcgtgtggcctaccaaggcgccgcagaaggag 378
||||||| |||||| |||| || |||||||||||||| || ||||||||||||||||
Sbjct: 1051 ttcttggagaggaccaaggggagggggctcgtgtggccgacgcgggcgccgcagaaggag 1110
Query: 379 atactcgcccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctc 438
|| ||||| |||||||||||||| || ||||| || ||||| || |||||||| ||||
Sbjct: 1111 atcctcgcgcacgccgccgtgggcgggttcgtgacccactgcgggtggaactccatcctg 1170
Query: 439 gagagcctctggcatggcgtgccgatggtgccatggccgcttggcgccgagcagcactac 498
|||||||||||| ||||||||| || ||||||||||||| | |||||||||||||| |
Sbjct: 1171 gagagcctctggttcggcgtgccggtgctgccatggccgctcgacgccgagcagcacttc 1230
Query: 499 aacgcgttcacgctggtggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaag 558
||||||||||| ||||| ||| || |||||||||||||| |||| | |||| |||| |
Sbjct: 1231 aacgcgttcaccctggtcgcccacctgggcgtcgccgtgccgctcggcatggacaggagg 1290
Query: 559 aggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|| | || |||||||||||| | ||||||||||| |||||
Sbjct: 1291 cgggacaacttcgtggaggcggcggagctggagcgcgcggt 1331
Score = 99.6 bits (50), Expect = 3e-018
Identities = 136/165 (82%)
Strand = Plus / Plus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
|||||||||||||| ||||||||||| || ||||| || || |||||||| |||||||
Sbjct: 724 gccatcgccgacggccggtgcacgcgcggggtccccgcgccgacggtgtacccgatcggc 783
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
|||||| || ||| | | ||||| | ||| ||||| |||| ||||||||||| ||||||
Sbjct: 784 ccggtgctctccttccccccgccgccggaggagcagccgcacgagtgcgtgcggtggctc 843
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagc 168
||| ||||||| ||| |||||| | ||||| ||||||||||||
Sbjct: 844 gacgcgcagcccccggcgtccgtgctcttcctctgcttcggcagc 888
>dbj|AK119544.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-H01, full
insert sequence
Length = 1645
Score = 192 bits (97), Expect = 3e-046
Identities = 235/281 (83%)
Strand = Plus / Plus
Query: 319 ttcttggcgaggacgaaggatagagggctcgtgtggcctaccaaggcgccgcagaaggag 378
||||||| |||||| |||| || |||||||||||||| || ||||||||||||||||
Sbjct: 1051 ttcttggagaggaccaaggggagggggctcgtgtggccgacgcgggcgccgcagaaggag 1110
Query: 379 atactcgcccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctc 438
|| ||||| |||||||||||||| || ||||| || ||||| || |||||||| ||||
Sbjct: 1111 atcctcgcgcacgccgccgtgggcgggttcgtgacccactgcgggtggaactccatcctg 1170
Query: 439 gagagcctctggcatggcgtgccgatggtgccatggccgcttggcgccgagcagcactac 498
|||||||||||| ||||||||| || ||||||||||||| | |||||||||||||| |
Sbjct: 1171 gagagcctctggttcggcgtgccggtgctgccatggccgctcgacgccgagcagcacttc 1230
Query: 499 aacgcgttcacgctggtggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaag 558
||||||||||| ||||| ||| || |||||||||||||| |||| | |||| |||| |
Sbjct: 1231 aacgcgttcaccctggtcgcccacctgggcgtcgccgtgccgctcggcatggacaggagg 1290
Query: 559 aggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|| | || |||||||||||| | ||||||||||| |||||
Sbjct: 1291 cgggacaacttcgtggaggcggcggagctggagcgcgcggt 1331
Score = 99.6 bits (50), Expect = 3e-018
Identities = 136/165 (82%)
Strand = Plus / Plus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
|||||||||||||| ||||||||||| || ||||| || || |||||||| |||||||
Sbjct: 724 gccatcgccgacggccggtgcacgcgcggggtccccgcgccgacggtgtacccgatcggc 783
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
|||||| || ||| | | ||||| | ||| ||||| |||| ||||||||||| ||||||
Sbjct: 784 ccggtgctctccttccccccgccgccggaggagcagccgcacgagtgcgtgcggtggctc 843
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagc 168
||| ||||||| ||| |||||| | ||||| ||||||||||||
Sbjct: 844 gacgcgcagcccccggcgtccgtgctcttcctctgcttcggcagc 888
>gb|AACV01016342.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016342, whole
genome shotgun sequence
Length = 18880
Score = 192 bits (97), Expect = 3e-046
Identities = 235/281 (83%)
Strand = Plus / Minus
Query: 319 ttcttggcgaggacgaaggatagagggctcgtgtggcctaccaaggcgccgcagaaggag 378
||||||| |||||| |||| || |||||||||||||| || ||||||||||||||||
Sbjct: 6965 ttcttggagaggaccaaggggagggggctcgtgtggccgacgcgggcgccgcagaaggag 6906
Query: 379 atactcgcccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctc 438
|| ||||| |||||||||||||| || ||||| || ||||| || |||||||| ||||
Sbjct: 6905 atcctcgcgcacgccgccgtgggcgggttcgtgacccactgcgggtggaactccatcctg 6846
Query: 439 gagagcctctggcatggcgtgccgatggtgccatggccgcttggcgccgagcagcactac 498
|||||||||||| ||||||||| || ||||||||||||| | |||||||||||||| |
Sbjct: 6845 gagagcctctggttcggcgtgccggtgctgccatggccgctcgacgccgagcagcacttc 6786
Query: 499 aacgcgttcacgctggtggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaag 558
||||||||||| ||||| ||| || |||||||||||||| |||| | |||| |||| |
Sbjct: 6785 aacgcgttcaccctggtcgcccacctgggcgtcgccgtgccgctcggcatggacaggagg 6726
Query: 559 aggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|| | || |||||||||||| | ||||||||||| |||||
Sbjct: 6725 cgggacaacttcgtggaggcggcggagctggagcgcgcggt 6685
Score = 161 bits (81), Expect = 1e-036
Identities = 171/201 (85%)
Strand = Plus / Minus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
|||||||||||||| || ||||||||||||||| || ||||||||||||||||||||
Sbjct: 14859 gggctcgtgtggccgacgcgggcgccgcagaaggacatcctcgcccacgccgccgtgggc 14800
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccg 462
|| ||||| |||||||| || |||||||| ||||||||||||||||| |||||||||
Sbjct: 14799 gggttcgtgacgcactgcgggtggaactccatcctcgagagcctctggttcggcgtgccg 14740
Query: 463 atggtgccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgac 522
||| ||||||||||||| | | |||||||||| ||||||||| ||||||| ||| |
Sbjct: 14739 atgctgccatggccgctcgacaacgagcagcacgcgaacgcgttcctgctggtgtccgtc 14680
Query: 523 atgggcgtcgccgtggcgctg 543
|||||||||||||| |||||
Sbjct: 14679 ctgggcgtcgccgtgccgctg 14659
Score = 99.6 bits (50), Expect = 3e-018
Identities = 136/165 (82%)
Strand = Plus / Minus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
|||||||||||||| ||||||||||| || ||||| || || |||||||| |||||||
Sbjct: 7292 gccatcgccgacggccggtgcacgcgcggggtccccgcgccgacggtgtacccgatcggc 7233
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
|||||| || ||| | | ||||| | ||| ||||| |||| ||||||||||| ||||||
Sbjct: 7232 ccggtgctctccttccccccgccgccggaggagcagccgcacgagtgcgtgcggtggctc 7173
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagc 168
||| ||||||| ||| |||||| | ||||| ||||||||||||
Sbjct: 7172 gacgcgcagcccccggcgtccgtgctcttcctctgcttcggcagc 7128
Score = 63.9 bits (32), Expect = 2e-007
Identities = 132/165 (80%), Gaps = 3/165 (1%)
Strand = Plus / Minus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
|||||||||||||| ||||||||||| || || || || || |||||||| |||||||
Sbjct: 15204 gccatcgccgacggccggtgcacgcgcggggtgcccgcgccgacggtgtacgcgatcggc 15145
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
||||||||| | ||| ||||| | ||||||| |||| ||||||||||| |||||
Sbjct: 15144 ccggtgatcgcgctcaccccgccgccggagcagc---cgcacgagtgcgtgcggtggctg 15088
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagc 168
||| ||||||| ||| |||||| || || | ||||||||||||
Sbjct: 15087 gacgcgcagcccccggcgtccgtgctgctcgtctgcttcggcagc 15043
>ref|XM_478346.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1599
Score = 192 bits (97), Expect = 3e-046
Identities = 235/281 (83%)
Strand = Plus / Plus
Query: 319 ttcttggcgaggacgaaggatagagggctcgtgtggcctaccaaggcgccgcagaaggag 378
||||||| |||||| |||| || |||||||||||||| || ||||||||||||||||
Sbjct: 1005 ttcttggagaggaccaaggggagggggctcgtgtggccgacgcgggcgccgcagaaggag 1064
Query: 379 atactcgcccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctc 438
|| ||||| |||||||||||||| || ||||| || ||||| || |||||||| ||||
Sbjct: 1065 atcctcgcgcacgccgccgtgggcgggttcgtgacccactgcgggtggaactccatcctg 1124
Query: 439 gagagcctctggcatggcgtgccgatggtgccatggccgcttggcgccgagcagcactac 498
|||||||||||| ||||||||| || ||||||||||||| | |||||||||||||| |
Sbjct: 1125 gagagcctctggttcggcgtgccggtgctgccatggccgctcgacgccgagcagcacttc 1184
Query: 499 aacgcgttcacgctggtggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaag 558
||||||||||| ||||| ||| || |||||||||||||| |||| | |||| |||| |
Sbjct: 1185 aacgcgttcaccctggtcgcccacctgggcgtcgccgtgccgctcggcatggacaggagg 1244
Query: 559 aggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|| | || |||||||||||| | ||||||||||| |||||
Sbjct: 1245 cgggacaacttcgtggaggcggcggagctggagcgcgcggt 1285
Score = 99.6 bits (50), Expect = 3e-018
Identities = 136/165 (82%)
Strand = Plus / Plus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
|||||||||||||| ||||||||||| || ||||| || || |||||||| |||||||
Sbjct: 678 gccatcgccgacggccggtgcacgcgcggggtccccgcgccgacggtgtacccgatcggc 737
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
|||||| || ||| | | ||||| | ||| ||||| |||| ||||||||||| ||||||
Sbjct: 738 ccggtgctctccttccccccgccgccggaggagcagccgcacgagtgcgtgcggtggctc 797
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagc 168
||| ||||||| ||| |||||| | ||||| ||||||||||||
Sbjct: 798 gacgcgcagcccccggcgtccgtgctcttcctctgcttcggcagc 842
>ref|XM_506362.1| PREDICTED Oryza sativa (japonica cultivar-group), P0409B11.19 mRNA
Length = 1645
Score = 192 bits (97), Expect = 3e-046
Identities = 235/281 (83%)
Strand = Plus / Plus
Query: 319 ttcttggcgaggacgaaggatagagggctcgtgtggcctaccaaggcgccgcagaaggag 378
||||||| |||||| |||| || |||||||||||||| || ||||||||||||||||
Sbjct: 1051 ttcttggagaggaccaaggggagggggctcgtgtggccgacgcgggcgccgcagaaggag 1110
Query: 379 atactcgcccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctc 438
|| ||||| |||||||||||||| || ||||| || ||||| || |||||||| ||||
Sbjct: 1111 atcctcgcgcacgccgccgtgggcgggttcgtgacccactgcgggtggaactccatcctg 1170
Query: 439 gagagcctctggcatggcgtgccgatggtgccatggccgcttggcgccgagcagcactac 498
|||||||||||| ||||||||| || ||||||||||||| | |||||||||||||| |
Sbjct: 1171 gagagcctctggttcggcgtgccggtgctgccatggccgctcgacgccgagcagcacttc 1230
Query: 499 aacgcgttcacgctggtggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaag 558
||||||||||| ||||| ||| || |||||||||||||| |||| | |||| |||| |
Sbjct: 1231 aacgcgttcaccctggtcgcccacctgggcgtcgccgtgccgctcggcatggacaggagg 1290
Query: 559 aggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|| | || |||||||||||| | ||||||||||| |||||
Sbjct: 1291 cgggacaacttcgtggaggcggcggagctggagcgcgcggt 1331
Score = 99.6 bits (50), Expect = 3e-018
Identities = 136/165 (82%)
Strand = Plus / Plus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
|||||||||||||| ||||||||||| || ||||| || || |||||||| |||||||
Sbjct: 724 gccatcgccgacggccggtgcacgcgcggggtccccgcgccgacggtgtacccgatcggc 783
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
|||||| || ||| | | ||||| | ||| ||||| |||| ||||||||||| ||||||
Sbjct: 784 ccggtgctctccttccccccgccgccggaggagcagccgcacgagtgcgtgcggtggctc 843
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagc 168
||| ||||||| ||| |||||| | ||||| ||||||||||||
Sbjct: 844 gacgcgcagcccccggcgtccgtgctcttcctctgcttcggcagc 888
>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0409B11
Length = 168354
Score = 192 bits (97), Expect = 3e-046
Identities = 235/281 (83%)
Strand = Plus / Minus
Query: 319 ttcttggcgaggacgaaggatagagggctcgtgtggcctaccaaggcgccgcagaaggag 378
||||||| |||||| |||| || |||||||||||||| || ||||||||||||||||
Sbjct: 91079 ttcttggagaggaccaaggggagggggctcgtgtggccgacgcgggcgccgcagaaggag 91020
Query: 379 atactcgcccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctc 438
|| ||||| |||||||||||||| || ||||| || ||||| || |||||||| ||||
Sbjct: 91019 atcctcgcgcacgccgccgtgggcgggttcgtgacccactgcgggtggaactccatcctg 90960
Query: 439 gagagcctctggcatggcgtgccgatggtgccatggccgcttggcgccgagcagcactac 498
|||||||||||| ||||||||| || ||||||||||||| | |||||||||||||| |
Sbjct: 90959 gagagcctctggttcggcgtgccggtgctgccatggccgctcgacgccgagcagcacttc 90900
Query: 499 aacgcgttcacgctggtggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaag 558
||||||||||| ||||| ||| || |||||||||||||| |||| | |||| |||| |
Sbjct: 90899 aacgcgttcaccctggtcgcccacctgggcgtcgccgtgccgctcggcatggacaggagg 90840
Query: 559 aggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|| | || |||||||||||| | ||||||||||| |||||
Sbjct: 90839 cgggacaacttcgtggaggcggcggagctggagcgcgcggt 90799
Score = 161 bits (81), Expect = 1e-036
Identities = 171/201 (85%)
Strand = Plus / Minus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
|||||||||||||| || ||||||||||||||| || ||||||||||||||||||||
Sbjct: 98973 gggctcgtgtggccgacgcgggcgccgcagaaggacatcctcgcccacgccgccgtgggc 98914
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccg 462
|| ||||| |||||||| || |||||||| ||||||||||||||||| |||||||||
Sbjct: 98913 gggttcgtgacgcactgcgggtggaactccatcctcgagagcctctggttcggcgtgccg 98854
Query: 463 atggtgccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgac 522
||| ||||||||||||| | | |||||||||| ||||||||| ||||||| ||| |
Sbjct: 98853 atgctgccatggccgctcgacaacgagcagcacgcgaacgcgttcctgctggtgtccgtc 98794
Query: 523 atgggcgtcgccgtggcgctg 543
|||||||||||||| |||||
Sbjct: 98793 ctgggcgtcgccgtgccgctg 98773
Score = 99.6 bits (50), Expect = 3e-018
Identities = 136/165 (82%)
Strand = Plus / Minus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
|||||||||||||| ||||||||||| || ||||| || || |||||||| |||||||
Sbjct: 91406 gccatcgccgacggccggtgcacgcgcggggtccccgcgccgacggtgtacccgatcggc 91347
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
|||||| || ||| | | ||||| | ||| ||||| |||| ||||||||||| ||||||
Sbjct: 91346 ccggtgctctccttccccccgccgccggaggagcagccgcacgagtgcgtgcggtggctc 91287
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagc 168
||| ||||||| ||| |||||| | ||||| ||||||||||||
Sbjct: 91286 gacgcgcagcccccggcgtccgtgctcttcctctgcttcggcagc 91242
Score = 63.9 bits (32), Expect = 2e-007
Identities = 132/165 (80%), Gaps = 3/165 (1%)
Strand = Plus / Minus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
|||||||||||||| ||||||||||| || || || || || |||||||| |||||||
Sbjct: 99318 gccatcgccgacggccggtgcacgcgcggggtgcccgcgccgacggtgtacgcgatcggc 99259
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
||||||||| | ||| ||||| | ||||||| |||| ||||||||||| |||||
Sbjct: 99258 ccggtgatcgcgctcaccccgccgccggagcagc---cgcacgagtgcgtgcggtggctg 99202
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagc 168
||| ||||||| ||| |||||| || || | ||||||||||||
Sbjct: 99201 gacgcgcagcccccggcgtccgtgctgctcgtctgcttcggcagc 99157
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
Length = 17249721
Score = 192 bits (97), Expect = 3e-046
Identities = 235/281 (83%)
Strand = Plus / Minus
Query: 319 ttcttggcgaggacgaaggatagagggctcgtgtggcctaccaaggcgccgcagaaggag 378
||||||| |||||| |||| || |||||||||||||| || ||||||||||||||||
Sbjct: 7024616 ttcttggagaggaccaaggggagggggctcgtgtggccgacgcgggcgccgcagaaggag 7024557
Query: 379 atactcgcccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctc 438
|| ||||| |||||||||||||| || ||||| || ||||| || |||||||| ||||
Sbjct: 7024556 atcctcgcgcacgccgccgtgggcgggttcgtgacccactgcgggtggaactccatcctg 7024497
Query: 439 gagagcctctggcatggcgtgccgatggtgccatggccgcttggcgccgagcagcactac 498
|||||||||||| ||||||||| || ||||||||||||| | |||||||||||||| |
Sbjct: 7024496 gagagcctctggttcggcgtgccggtgctgccatggccgctcgacgccgagcagcacttc 7024437
Query: 499 aacgcgttcacgctggtggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaag 558
||||||||||| ||||| ||| || |||||||||||||| |||| | |||| |||| |
Sbjct: 7024436 aacgcgttcaccctggtcgcccacctgggcgtcgccgtgccgctcggcatggacaggagg 7024377
Query: 559 aggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|| | || |||||||||||| | ||||||||||| |||||
Sbjct: 7024376 cgggacaacttcgtggaggcggcggagctggagcgcgcggt 7024336
Score = 180 bits (91), Expect = 1e-042
Identities = 247/299 (82%)
Strand = Plus / Plus
Query: 301 gagctgcttccggcggatttcttggcgaggacgaaggatagagggctcgtgtggcctacc 360
||||| || |||| || |||| ||| |||||||| || |||| ||||||||||| ||
Sbjct: 6616343 gagcttctcccggagggtttcctggagaggacgacggggagagctctcgtgtggccgacg 6616402
Query: 361 aaggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgt 420
|||||||||||||||||| ||||| |||||||||||||| || ||||| |||||| |
Sbjct: 6616403 tgggcgccgcagaaggagatcctcgcgcacgccgccgtgggcgggttcgtgacgcacggc 6616462
Query: 421 ggctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgctt 480
|| ||||||||| || |||||||| ||| ||||||||||||||||| ||||||||
Sbjct: 6616463 gggtggaactcgacgctggagagcctgtggttcggcgtgccgatggtgccgtggccgctc 6616522
Query: 481 ggcgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcg 540
||| |||||||||| |||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 6616523 tacgcggagcagcacttgaacgcgttcacgctggtggccgccatgggcgtggccgtggcc 6616582
Query: 541 ctgaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|||| ||||| ||||| |||| || ||||| |||||| ||||| ||||||| |||||
Sbjct: 6616583 atgaaggtggacaggaaacggaacaacttcgtcgaggcgtccgaggtggagcgcgcggt 6616641
Score = 161 bits (81), Expect = 1e-036
Identities = 171/201 (85%)
Strand = Plus / Minus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
|||||||||||||| || ||||||||||||||| || ||||||||||||||||||||
Sbjct: 7032510 gggctcgtgtggccgacgcgggcgccgcagaaggacatcctcgcccacgccgccgtgggc 7032451
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccg 462
|| ||||| |||||||| || |||||||| ||||||||||||||||| |||||||||
Sbjct: 7032450 gggttcgtgacgcactgcgggtggaactccatcctcgagagcctctggttcggcgtgccg 7032391
Query: 463 atggtgccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgac 522
||| ||||||||||||| | | |||||||||| ||||||||| ||||||| ||| |
Sbjct: 7032390 atgctgccatggccgctcgacaacgagcagcacgcgaacgcgttcctgctggtgtccgtc 7032331
Query: 523 atgggcgtcgccgtggcgctg 543
|||||||||||||| |||||
Sbjct: 7032330 ctgggcgtcgccgtgccgctg 7032310
Score = 153 bits (77), Expect = 2e-034
Identities = 197/237 (83%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || ||||||||||||||||||||||||||||| |||||| | ||
Sbjct: 6631401 ggcgccgcagaaggacatcctcgcccacgccgccgtgggaggcttcgtgacgcacggcgg 6631460
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 6631461 gtggaactcgacgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 6631520
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||| ||| |||||||||||||||||||| | |
Sbjct: 6631521 cgcggagcagcacctgaacgcgttcgagctcgtgcgcgacatgggcgtcgccgtggagat 6631580
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
| | ||||| |||||| || || || ||||||||| | ||||||||||| |||||
Sbjct: 6631581 ggaggtggacaggaagcggggcaacttggtggaggcggcggagctggagcgcgcggt 6631637
Score = 137 bits (69), Expect = 1e-029
Identities = 195/237 (82%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
|||||||||||||||||| ||||||||| | ||| | || |||||||| |||||| | ||
Sbjct: 6608532 ggcgccgcagaaggagatcctcgcccacccggccatcggcggcttcgtgacgcacggcgg 6608591
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 6608592 gtggaactcggtgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 6608651
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||||||| |||||||||||| |||||| ||||
Sbjct: 6608652 cgcggagcagcacctgaacgcgttcgagctggtgcgcgacatgggcgtggccgtgccgct 6608711
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
||||| ||| || || | || |||||||||||| | ||||||||||| |||||
Sbjct: 6608712 cggggtggacagggagcgggacaacttcgtggaggcggcggagctggagcgcgcggt 6608768
Score = 127 bits (64), Expect = 1e-026
Identities = 166/200 (83%)
Strand = Plus / Minus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
|||||||||||||| || |||||||||||||||||| ||||||||||||||| | ||
Sbjct: 6578021 gggctcgtgtggccgacgtgggcgccgcagaaggagatcctcgcccacgccgccatcggc 6577962
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccg 462
||||||| |||||||| || ||||||||| || |||||||| ||||| |||||||||
Sbjct: 6577961 agcttcgtgacgcactgcgggtggaactcgacgctggagagcctgtggcacggcgtgccg 6577902
Query: 463 atggtgccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgac 522
||||||| |||||||| ||| ||||||| | ||||||||| ||||||| ||||
Sbjct: 6577901 ctggtgccgtggccgctgtacgcggagcagcgcctgaacgcgttcgagctggtgcgcgac 6577842
Query: 523 atgggcgtcgccgtggcgct 542
|||||||| |||||| ||||
Sbjct: 6577841 atgggcgtggccgtgccgct 6577822
Score = 115 bits (58), Expect = 5e-023
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 101 cgcaggagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcctatgct 160
|||| ||||||||||| ||||||||| ||||||||||| |||||| |||||||| ||||
Sbjct: 6616140 cgcacgagtgcgtgcggtggctcgacgcgcagcctccggcctccgtcgtgttcctctgct 6616199
Query: 161 tcggcagcggtggctgcttcacggcgccccaagcgcacgagatagcgcacggcctggacc 220
|||| ||| ||| || || || |||| || | || |||| | |||||||||||||| |
Sbjct: 6616200 tcgggagcatgggcagcctcgcgccgccgcaggtgctcgaggtggcgcacggcctggaac 6616259
Query: 221 gcagcgggcatcgattcctgtgggtgctgcgcgg 254
|||||||||| || ||||||||||||||||||||
Sbjct: 6616260 gcagcgggcaccggttcctgtgggtgctgcgcgg 6616293
Score = 105 bits (53), Expect = 5e-020
Identities = 122/145 (84%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || || | |||||||||||||| || ||||| |||||||| ||
Sbjct: 10158168 ggcgccgcagaaggacatcctgggacacgccgccgtgggcgggttcgtgacgcactgcgg 10158227
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
|||||||||||| || |||||||| ||| ||||||||||||| | ||||||||||
Sbjct: 10158228 ctggaactcggtgctggagagcctgtggttcggcgtgccgatggcgacatggccgctcta 10158287
Query: 483 cgccgagcagcactacaacgcgttc 507
|| |||||||||| ||||||||||
Sbjct: 10158288 cggcgagcagcacctcaacgcgttc 10158312
Score = 99.6 bits (50), Expect = 3e-018
Identities = 136/165 (82%)
Strand = Plus / Minus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
|||||||||||||| ||||||||||| || ||||| || || |||||||| |||||||
Sbjct: 7024943 gccatcgccgacggccggtgcacgcgcggggtccccgcgccgacggtgtacccgatcggc 7024884
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
|||||| || ||| | | ||||| | ||| ||||| |||| ||||||||||| ||||||
Sbjct: 7024883 ccggtgctctccttccccccgccgccggaggagcagccgcacgagtgcgtgcggtggctc 7024824
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagc 168
||| ||||||| ||| |||||| | ||||| ||||||||||||
Sbjct: 7024823 gacgcgcagcccccggcgtccgtgctcttcctctgcttcggcagc 7024779
Score = 77.8 bits (39), Expect = 1e-011
Identities = 128/155 (82%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 101 cgcaggagtgcgtgcgctggctcgactcgcagcctccgagc-tccgtggtgttcctatgc 159
|||| ||||||||||| ||||||||| ||||||| | |||| || || |||||||| |||
Sbjct: 6631139 cgcacgagtgcgtgcggtggctcgacgcgcagccgc-gagcgtcggtcgtgttcctctgc 6631197
Query: 160 ttcggcagcggtggctgcttcacggcgccccaagcgcacgagatagcgcacggcctggac 219
||||| ||| ||| ||||| || |||| || | || ||||||||| |||||| ||
Sbjct: 6631198 ttcgggagcatgggcagcttcgcgccgccgcaggtgctcgagatagccgccggcctcgag 6631257
Query: 220 cgcagcgggcatcgattcctgtgggtgctgcgcgg 254
||||||||||| || ||||||||||||||||||||
Sbjct: 6631258 cgcagcgggcaccgcttcctgtgggtgctgcgcgg 6631292
Score = 63.9 bits (32), Expect = 2e-007
Identities = 132/165 (80%), Gaps = 3/165 (1%)
Strand = Plus / Minus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
|||||||||||||| ||||||||||| || || || || || |||||||| |||||||
Sbjct: 7032855 gccatcgccgacggccggtgcacgcgcggggtgcccgcgccgacggtgtacgcgatcggc 7032796
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
||||||||| | ||| ||||| | ||||||| |||| ||||||||||| |||||
Sbjct: 7032795 ccggtgatcgcgctcaccccgccgccggagcagc---cgcacgagtgcgtgcggtggctg 7032739
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagc 168
||| ||||||| ||| |||||| || || | ||||||||||||
Sbjct: 7032738 gacgcgcagcccccggcgtccgtgctgctcgtctgcttcggcagc 7032694
Score = 52.0 bits (26), Expect = 6e-004
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 95 agcaggcgcaggagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcc 154
||||| |||| ||||||||||| ||||||||| ||||||| || || ||||||||||
Sbjct: 10157900 agcagccgcacgagtgcgtgcggtggctcgacgcgcagccggcggcgtcggtggtgttcc 10157959
Query: 155 tatgcttcgg 164
| ||||||||
Sbjct: 10157960 tctgcttcgg 10157969
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 211 ggcctggaccgcagcgggcatcgattcctgtgggtgctgcgcgg 254
|||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 10158016 ggcctggagcgcagcggccaccgcttcctgtgggtcctgcgcgg 10158059
>gb|CH401226.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000063 genomic
scaffold, whole genome shotgun sequence
Length = 15204090
Score = 192 bits (97), Expect = 3e-046
Identities = 235/281 (83%)
Strand = Plus / Minus
Query: 319 ttcttggcgaggacgaaggatagagggctcgtgtggcctaccaaggcgccgcagaaggag 378
||||||| |||||| |||| || |||||||||||||| || ||||||||||||||||
Sbjct: 4954106 ttcttggagaggaccaaggggagggggctcgtgtggccgacgcgggcgccgcagaaggag 4954047
Query: 379 atactcgcccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctc 438
|| ||||| |||||||||||||| || ||||| || ||||| || |||||||| ||||
Sbjct: 4954046 atcctcgcgcacgccgccgtgggcgggttcgtgacccactgcgggtggaactccatcctg 4953987
Query: 439 gagagcctctggcatggcgtgccgatggtgccatggccgcttggcgccgagcagcactac 498
|||||||||||| ||||||||| || ||||||||||||| | |||||||||||||| |
Sbjct: 4953986 gagagcctctggttcggcgtgccggtgctgccatggccgctcgacgccgagcagcacttc 4953927
Query: 499 aacgcgttcacgctggtggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaag 558
||||||||||| ||||| ||| || |||||||||||||| |||| | |||| |||| |
Sbjct: 4953926 aacgcgttcaccctggtcgcccacctgggcgtcgccgtgccgctcggcatggacaggagg 4953867
Query: 559 aggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|| | || |||||||||||| | ||||||||||| |||||
Sbjct: 4953866 cgggacaacttcgtggaggcggcggagctggagcgcgcggt 4953826
Score = 180 bits (91), Expect = 1e-042
Identities = 247/299 (82%)
Strand = Plus / Plus
Query: 301 gagctgcttccggcggatttcttggcgaggacgaaggatagagggctcgtgtggcctacc 360
||||| || |||| || |||| ||| |||||||| || |||| ||||||||||| ||
Sbjct: 4554141 gagcttctcccggagggtttcctggagaggacgacggggagagctctcgtgtggccgacg 4554200
Query: 361 aaggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgt 420
|||||||||||||||||| ||||| |||||||||||||| || ||||| |||||| |
Sbjct: 4554201 tgggcgccgcagaaggagatcctcgcgcacgccgccgtgggcgggttcgtgacgcacggc 4554260
Query: 421 ggctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgctt 480
|| ||||||||| || |||||||| ||| ||||||||||||||||| ||||||||
Sbjct: 4554261 gggtggaactcgacgctggagagcctgtggttcggcgtgccgatggtgccgtggccgctc 4554320
Query: 481 ggcgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcg 540
||| |||||||||| |||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 4554321 tacgcggagcagcacttgaacgcgttcacgctggtggccgccatgggcgtggccgtggcc 4554380
Query: 541 ctgaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|||| ||||| ||||| |||| || ||||| |||||| ||||| ||||||| |||||
Sbjct: 4554381 atgaaggtggacaggaaacggaacaacttcgtcgaggcgtccgaggtggagcgcgcggt 4554439
Score = 161 bits (81), Expect = 1e-036
Identities = 171/201 (85%)
Strand = Plus / Minus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
|||||||||||||| || ||||||||||||||| || ||||||||||||||||||||
Sbjct: 4962000 gggctcgtgtggccgacgcgggcgccgcagaaggacatcctcgcccacgccgccgtgggc 4961941
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccg 462
|| ||||| |||||||| || |||||||| ||||||||||||||||| |||||||||
Sbjct: 4961940 gggttcgtgacgcactgcgggtggaactccatcctcgagagcctctggttcggcgtgccg 4961881
Query: 463 atggtgccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgac 522
||| ||||||||||||| | | |||||||||| ||||||||| ||||||| ||| |
Sbjct: 4961880 atgctgccatggccgctcgacaacgagcagcacgcgaacgcgttcctgctggtgtccgtc 4961821
Query: 523 atgggcgtcgccgtggcgctg 543
|||||||||||||| |||||
Sbjct: 4961820 ctgggcgtcgccgtgccgctg 4961800
Score = 153 bits (77), Expect = 2e-034
Identities = 197/237 (83%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || ||||||||||||||||||||||||||||| |||||| | ||
Sbjct: 4568813 ggcgccgcagaaggacatcctcgcccacgccgccgtgggaggcttcgtgacgcacggcgg 4568872
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 4568873 gtggaactcgacgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 4568932
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||| ||| |||||||||||||||||||| | |
Sbjct: 4568933 cgcggagcagcacctgaacgcgttcgagctcgtgcgcgacatgggcgtcgccgtggagat 4568992
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
| | ||||| |||||| || || || ||||||||| | ||||||||||| |||||
Sbjct: 4568993 ggaggtggacaggaagcggggcaacttggtggaggcggcggagctggagcgcgcggt 4569049
Score = 137 bits (69), Expect = 1e-029
Identities = 195/237 (82%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
|||||||||||||||||| ||||||||| | ||| | || |||||||| |||||| | ||
Sbjct: 4546330 ggcgccgcagaaggagatcctcgcccacccggccatcggcggcttcgtgacgcacggcgg 4546389
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 4546390 gtggaactcggtgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 4546449
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||||||| |||||||||||| |||||| ||||
Sbjct: 4546450 cgcggagcagcacctgaacgcgttcgagctggtgcgcgacatgggcgtggccgtgccgct 4546509
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
||||| ||| || || | || |||||||||||| | ||||||||||| |||||
Sbjct: 4546510 cggggtggacagggagcgggacaacttcgtggaggcggcggagctggagcgcgcggt 4546566
Score = 127 bits (64), Expect = 1e-026
Identities = 166/200 (83%)
Strand = Plus / Minus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
|||||||||||||| || |||||||||||||||||| ||||||||||||||| | ||
Sbjct: 4521933 gggctcgtgtggccgacgtgggcgccgcagaaggagatcctcgcccacgccgccatcggc 4521874
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccg 462
||||||| |||||||| || ||||||||| || |||||||| ||||| |||||||||
Sbjct: 4521873 agcttcgtgacgcactgcgggtggaactcgacgctggagagcctgtggcacggcgtgccg 4521814
Query: 463 atggtgccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgac 522
||||||| |||||||| ||| ||||||| | ||||||||| ||||||| ||||
Sbjct: 4521813 ctggtgccgtggccgctgtacgcggagcagcgcctgaacgcgttcgagctggtgcgcgac 4521754
Query: 523 atgggcgtcgccgtggcgct 542
|||||||| |||||| ||||
Sbjct: 4521753 atgggcgtggccgtgccgct 4521734
Score = 115 bits (58), Expect = 5e-023
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 101 cgcaggagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcctatgct 160
|||| ||||||||||| ||||||||| ||||||||||| |||||| |||||||| ||||
Sbjct: 4553938 cgcacgagtgcgtgcggtggctcgacgcgcagcctccggcctccgtcgtgttcctctgct 4553997
Query: 161 tcggcagcggtggctgcttcacggcgccccaagcgcacgagatagcgcacggcctggacc 220
|||| ||| ||| || || || |||| || | || |||| | |||||||||||||| |
Sbjct: 4553998 tcgggagcatgggcagcctcgcgccgccgcaggtgctcgaggtggcgcacggcctggaac 4554057
Query: 221 gcagcgggcatcgattcctgtgggtgctgcgcgg 254
|||||||||| || ||||||||||||||||||||
Sbjct: 4554058 gcagcgggcaccggttcctgtgggtgctgcgcgg 4554091
Score = 105 bits (53), Expect = 5e-020
Identities = 122/145 (84%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || || | |||||||||||||| || ||||| |||||||| ||
Sbjct: 7982241 ggcgccgcagaaggacatcctgggacacgccgccgtgggcgggttcgtgacgcactgcgg 7982300
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
|||||||||||| || |||||||| ||| ||||||||||||| | ||||||||||
Sbjct: 7982301 ctggaactcggtgctggagagcctgtggttcggcgtgccgatggcgacatggccgctcta 7982360
Query: 483 cgccgagcagcactacaacgcgttc 507
|| |||||||||| ||||||||||
Sbjct: 7982361 cggcgagcagcacctcaacgcgttc 7982385
Score = 99.6 bits (50), Expect = 3e-018
Identities = 136/165 (82%)
Strand = Plus / Minus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
|||||||||||||| ||||||||||| || ||||| || || |||||||| |||||||
Sbjct: 4954433 gccatcgccgacggccggtgcacgcgcggggtccccgcgccgacggtgtacccgatcggc 4954374
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
|||||| || ||| | | ||||| | ||| ||||| |||| ||||||||||| ||||||
Sbjct: 4954373 ccggtgctctccttccccccgccgccggaggagcagccgcacgagtgcgtgcggtggctc 4954314
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagc 168
||| ||||||| ||| |||||| | ||||| ||||||||||||
Sbjct: 4954313 gacgcgcagcccccggcgtccgtgctcttcctctgcttcggcagc 4954269
Score = 77.8 bits (39), Expect = 1e-011
Identities = 128/155 (82%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 101 cgcaggagtgcgtgcgctggctcgactcgcagcctccgagc-tccgtggtgttcctatgc 159
|||| ||||||||||| ||||||||| ||||||| | |||| || || |||||||| |||
Sbjct: 4568549 cgcacgagtgcgtgcggtggctcgacgcgcagccgc-gagcgtcggtcgtgttcctctgc 4568607
Query: 160 ttcggcagcggtggctgcttcacggcgccccaagcgcacgagatagcgcacggcctggac 219
||||| ||| ||| ||||| || |||| || | || ||||||||| |||||| ||
Sbjct: 4568608 ttcgggagcatgggcagcttcgcgccgccgcaggtgctcgagatagccgccggcctcgag 4568667
Query: 220 cgcagcgggcatcgattcctgtgggtgctgcgcgg 254
||||||||||| || ||||||||||||||||||||
Sbjct: 4568668 cgcagcgggcaccgcttcctgtgggtgctgcgcgg 4568702
Score = 63.9 bits (32), Expect = 2e-007
Identities = 132/165 (80%), Gaps = 3/165 (1%)
Strand = Plus / Minus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
|||||||||||||| ||||||||||| || || || || || |||||||| |||||||
Sbjct: 4962345 gccatcgccgacggccggtgcacgcgcggggtgcccgcgccgacggtgtacgcgatcggc 4962286
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
||||||||| | ||| ||||| | ||||||| |||| ||||||||||| |||||
Sbjct: 4962285 ccggtgatcgcgctcaccccgccgccggagcagc---cgcacgagtgcgtgcggtggctg 4962229
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagc 168
||| ||||||| ||| |||||| || || | ||||||||||||
Sbjct: 4962228 gacgcgcagcccccggcgtccgtgctgctcgtctgcttcggcagc 4962184
Score = 52.0 bits (26), Expect = 6e-004
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 95 agcaggcgcaggagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcc 154
||||| |||| ||||||||||| ||||||||| ||||||| || || ||||||||||
Sbjct: 7981973 agcagccgcacgagtgcgtgcggtggctcgacgcgcagccggcggcgtcggtggtgttcc 7982032
Query: 155 tatgcttcgg 164
| ||||||||
Sbjct: 7982033 tctgcttcgg 7982042
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 211 ggcctggaccgcagcgggcatcgattcctgtgggtgctgcgcgg 254
|||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 7982089 ggcctggagcgcagcggccaccgcttcctgtgggtcctgcgcgg 7982132
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 192 bits (97), Expect = 3e-046
Identities = 235/281 (83%)
Strand = Plus / Minus
Query: 319 ttcttggcgaggacgaaggatagagggctcgtgtggcctaccaaggcgccgcagaaggag 378
||||||| |||||| |||| || |||||||||||||| || ||||||||||||||||
Sbjct: 18353545 ttcttggagaggaccaaggggagggggctcgtgtggccgacgcgggcgccgcagaaggag 18353486
Query: 379 atactcgcccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctc 438
|| ||||| |||||||||||||| || ||||| || ||||| || |||||||| ||||
Sbjct: 18353485 atcctcgcgcacgccgccgtgggcgggttcgtgacccactgcgggtggaactccatcctg 18353426
Query: 439 gagagcctctggcatggcgtgccgatggtgccatggccgcttggcgccgagcagcactac 498
|||||||||||| ||||||||| || ||||||||||||| | |||||||||||||| |
Sbjct: 18353425 gagagcctctggttcggcgtgccggtgctgccatggccgctcgacgccgagcagcacttc 18353366
Query: 499 aacgcgttcacgctggtggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaag 558
||||||||||| ||||| ||| || |||||||||||||| |||| | |||| |||| |
Sbjct: 18353365 aacgcgttcaccctggtcgcccacctgggcgtcgccgtgccgctcggcatggacaggagg 18353306
Query: 559 aggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|| | || |||||||||||| | ||||||||||| |||||
Sbjct: 18353305 cgggacaacttcgtggaggcggcggagctggagcgcgcggt 18353265
Score = 180 bits (91), Expect = 1e-042
Identities = 247/299 (82%)
Strand = Plus / Plus
Query: 301 gagctgcttccggcggatttcttggcgaggacgaaggatagagggctcgtgtggcctacc 360
||||| || |||| || |||| ||| |||||||| || |||| ||||||||||| ||
Sbjct: 17953580 gagcttctcccggagggtttcctggagaggacgacggggagagctctcgtgtggccgacg 17953639
Query: 361 aaggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgt 420
|||||||||||||||||| ||||| |||||||||||||| || ||||| |||||| |
Sbjct: 17953640 tgggcgccgcagaaggagatcctcgcgcacgccgccgtgggcgggttcgtgacgcacggc 17953699
Query: 421 ggctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgctt 480
|| ||||||||| || |||||||| ||| ||||||||||||||||| ||||||||
Sbjct: 17953700 gggtggaactcgacgctggagagcctgtggttcggcgtgccgatggtgccgtggccgctc 17953759
Query: 481 ggcgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcg 540
||| |||||||||| |||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 17953760 tacgcggagcagcacttgaacgcgttcacgctggtggccgccatgggcgtggccgtggcc 17953819
Query: 541 ctgaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|||| ||||| ||||| |||| || ||||| |||||| ||||| ||||||| |||||
Sbjct: 17953820 atgaaggtggacaggaaacggaacaacttcgtcgaggcgtccgaggtggagcgcgcggt 17953878
Score = 161 bits (81), Expect = 1e-036
Identities = 171/201 (85%)
Strand = Plus / Minus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
|||||||||||||| || ||||||||||||||| || ||||||||||||||||||||
Sbjct: 18361439 gggctcgtgtggccgacgcgggcgccgcagaaggacatcctcgcccacgccgccgtgggc 18361380
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccg 462
|| ||||| |||||||| || |||||||| ||||||||||||||||| |||||||||
Sbjct: 18361379 gggttcgtgacgcactgcgggtggaactccatcctcgagagcctctggttcggcgtgccg 18361320
Query: 463 atggtgccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgac 522
||| ||||||||||||| | | |||||||||| ||||||||| ||||||| ||| |
Sbjct: 18361319 atgctgccatggccgctcgacaacgagcagcacgcgaacgcgttcctgctggtgtccgtc 18361260
Query: 523 atgggcgtcgccgtggcgctg 543
|||||||||||||| |||||
Sbjct: 18361259 ctgggcgtcgccgtgccgctg 18361239
Score = 153 bits (77), Expect = 2e-034
Identities = 197/237 (83%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || ||||||||||||||||||||||||||||| |||||| | ||
Sbjct: 17968252 ggcgccgcagaaggacatcctcgcccacgccgccgtgggaggcttcgtgacgcacggcgg 17968311
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 17968312 gtggaactcgacgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 17968371
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||| ||| |||||||||||||||||||| | |
Sbjct: 17968372 cgcggagcagcacctgaacgcgttcgagctcgtgcgcgacatgggcgtcgccgtggagat 17968431
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
| | ||||| |||||| || || || ||||||||| | ||||||||||| |||||
Sbjct: 17968432 ggaggtggacaggaagcggggcaacttggtggaggcggcggagctggagcgcgcggt 17968488
Score = 137 bits (69), Expect = 1e-029
Identities = 195/237 (82%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
|||||||||||||||||| ||||||||| | ||| | || |||||||| |||||| | ||
Sbjct: 17945769 ggcgccgcagaaggagatcctcgcccacccggccatcggcggcttcgtgacgcacggcgg 17945828
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 17945829 gtggaactcggtgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 17945888
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||||||| |||||||||||| |||||| ||||
Sbjct: 17945889 cgcggagcagcacctgaacgcgttcgagctggtgcgcgacatgggcgtggccgtgccgct 17945948
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
||||| ||| || || | || |||||||||||| | ||||||||||| |||||
Sbjct: 17945949 cggggtggacagggagcgggacaacttcgtggaggcggcggagctggagcgcgcggt 17946005
Score = 127 bits (64), Expect = 1e-026
Identities = 166/200 (83%)
Strand = Plus / Minus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
|||||||||||||| || |||||||||||||||||| ||||||||||||||| | ||
Sbjct: 17921372 gggctcgtgtggccgacgtgggcgccgcagaaggagatcctcgcccacgccgccatcggc 17921313
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccg 462
||||||| |||||||| || ||||||||| || |||||||| ||||| |||||||||
Sbjct: 17921312 agcttcgtgacgcactgcgggtggaactcgacgctggagagcctgtggcacggcgtgccg 17921253
Query: 463 atggtgccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgac 522
||||||| |||||||| ||| ||||||| | ||||||||| ||||||| ||||
Sbjct: 17921252 ctggtgccgtggccgctgtacgcggagcagcgcctgaacgcgttcgagctggtgcgcgac 17921193
Query: 523 atgggcgtcgccgtggcgct 542
|||||||| |||||| ||||
Sbjct: 17921192 atgggcgtggccgtgccgct 17921173
Score = 115 bits (58), Expect = 5e-023
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 101 cgcaggagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcctatgct 160
|||| ||||||||||| ||||||||| ||||||||||| |||||| |||||||| ||||
Sbjct: 17953377 cgcacgagtgcgtgcggtggctcgacgcgcagcctccggcctccgtcgtgttcctctgct 17953436
Query: 161 tcggcagcggtggctgcttcacggcgccccaagcgcacgagatagcgcacggcctggacc 220
|||| ||| ||| || || || |||| || | || |||| | |||||||||||||| |
Sbjct: 17953437 tcgggagcatgggcagcctcgcgccgccgcaggtgctcgaggtggcgcacggcctggaac 17953496
Query: 221 gcagcgggcatcgattcctgtgggtgctgcgcgg 254
|||||||||| || ||||||||||||||||||||
Sbjct: 17953497 gcagcgggcaccggttcctgtgggtgctgcgcgg 17953530
Score = 105 bits (53), Expect = 5e-020
Identities = 122/145 (84%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || || | |||||||||||||| || ||||| |||||||| ||
Sbjct: 21381680 ggcgccgcagaaggacatcctgggacacgccgccgtgggcgggttcgtgacgcactgcgg 21381739
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
|||||||||||| || |||||||| ||| ||||||||||||| | ||||||||||
Sbjct: 21381740 ctggaactcggtgctggagagcctgtggttcggcgtgccgatggcgacatggccgctcta 21381799
Query: 483 cgccgagcagcactacaacgcgttc 507
|| |||||||||| ||||||||||
Sbjct: 21381800 cggcgagcagcacctcaacgcgttc 21381824
Score = 99.6 bits (50), Expect = 3e-018
Identities = 136/165 (82%)
Strand = Plus / Minus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
|||||||||||||| ||||||||||| || ||||| || || |||||||| |||||||
Sbjct: 18353872 gccatcgccgacggccggtgcacgcgcggggtccccgcgccgacggtgtacccgatcggc 18353813
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
|||||| || ||| | | ||||| | ||| ||||| |||| ||||||||||| ||||||
Sbjct: 18353812 ccggtgctctccttccccccgccgccggaggagcagccgcacgagtgcgtgcggtggctc 18353753
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagc 168
||| ||||||| ||| |||||| | ||||| ||||||||||||
Sbjct: 18353752 gacgcgcagcccccggcgtccgtgctcttcctctgcttcggcagc 18353708
Score = 77.8 bits (39), Expect = 1e-011
Identities = 128/155 (82%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 101 cgcaggagtgcgtgcgctggctcgactcgcagcctccgagc-tccgtggtgttcctatgc 159
|||| ||||||||||| ||||||||| ||||||| | |||| || || |||||||| |||
Sbjct: 17967988 cgcacgagtgcgtgcggtggctcgacgcgcagccgc-gagcgtcggtcgtgttcctctgc 17968046
Query: 160 ttcggcagcggtggctgcttcacggcgccccaagcgcacgagatagcgcacggcctggac 219
||||| ||| ||| ||||| || |||| || | || ||||||||| |||||| ||
Sbjct: 17968047 ttcgggagcatgggcagcttcgcgccgccgcaggtgctcgagatagccgccggcctcgag 17968106
Query: 220 cgcagcgggcatcgattcctgtgggtgctgcgcgg 254
||||||||||| || ||||||||||||||||||||
Sbjct: 17968107 cgcagcgggcaccgcttcctgtgggtgctgcgcgg 17968141
Score = 63.9 bits (32), Expect = 2e-007
Identities = 132/165 (80%), Gaps = 3/165 (1%)
Strand = Plus / Minus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
|||||||||||||| ||||||||||| || || || || || |||||||| |||||||
Sbjct: 18361784 gccatcgccgacggccggtgcacgcgcggggtgcccgcgccgacggtgtacgcgatcggc 18361725
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
||||||||| | ||| ||||| | ||||||| |||| ||||||||||| |||||
Sbjct: 18361724 ccggtgatcgcgctcaccccgccgccggagcagc---cgcacgagtgcgtgcggtggctg 18361668
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagc 168
||| ||||||| ||| |||||| || || | ||||||||||||
Sbjct: 18361667 gacgcgcagcccccggcgtccgtgctgctcgtctgcttcggcagc 18361623
Score = 52.0 bits (26), Expect = 6e-004
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 95 agcaggcgcaggagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcc 154
||||| |||| ||||||||||| ||||||||| ||||||| || || ||||||||||
Sbjct: 21381412 agcagccgcacgagtgcgtgcggtggctcgacgcgcagccggcggcgtcggtggtgttcc 21381471
Query: 155 tatgcttcgg 164
| ||||||||
Sbjct: 21381472 tctgcttcgg 21381481
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 211 ggcctggaccgcagcgggcatcgattcctgtgggtgctgcgcgg 254
|||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 21381528 ggcctggagcgcagcggccaccgcttcctgtgggtcctgcgcgg 21381571
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 192 bits (97), Expect = 3e-046
Identities = 235/281 (83%)
Strand = Plus / Minus
Query: 319 ttcttggcgaggacgaaggatagagggctcgtgtggcctaccaaggcgccgcagaaggag 378
||||||| |||||| |||| || |||||||||||||| || ||||||||||||||||
Sbjct: 19401541 ttcttggagaggaccaaggggagggggctcgtgtggccgacgcgggcgccgcagaaggag 19401482
Query: 379 atactcgcccacgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctc 438
|| ||||| |||||||||||||| || ||||| || ||||| || |||||||| ||||
Sbjct: 19401481 atcctcgcgcacgccgccgtgggcgggttcgtgacccactgcgggtggaactccatcctg 19401422
Query: 439 gagagcctctggcatggcgtgccgatggtgccatggccgcttggcgccgagcagcactac 498
|||||||||||| ||||||||| || ||||||||||||| | |||||||||||||| |
Sbjct: 19401421 gagagcctctggttcggcgtgccggtgctgccatggccgctcgacgccgagcagcacttc 19401362
Query: 499 aacgcgttcacgctggtggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaag 558
||||||||||| ||||| ||| || |||||||||||||| |||| | |||| |||| |
Sbjct: 19401361 aacgcgttcaccctggtcgcccacctgggcgtcgccgtgccgctcggcatggacaggagg 19401302
Query: 559 aggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|| | || |||||||||||| | ||||||||||| |||||
Sbjct: 19401301 cgggacaacttcgtggaggcggcggagctggagcgcgcggt 19401261
Score = 180 bits (91), Expect = 1e-042
Identities = 247/299 (82%)
Strand = Plus / Plus
Query: 301 gagctgcttccggcggatttcttggcgaggacgaaggatagagggctcgtgtggcctacc 360
||||| || |||| || |||| ||| |||||||| || |||| ||||||||||| ||
Sbjct: 18993268 gagcttctcccggagggtttcctggagaggacgacggggagagctctcgtgtggccgacg 18993327
Query: 361 aaggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgt 420
|||||||||||||||||| ||||| |||||||||||||| || ||||| |||||| |
Sbjct: 18993328 tgggcgccgcagaaggagatcctcgcgcacgccgccgtgggcgggttcgtgacgcacggc 18993387
Query: 421 ggctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgctt 480
|| ||||||||| || |||||||| ||| ||||||||||||||||| ||||||||
Sbjct: 18993388 gggtggaactcgacgctggagagcctgtggttcggcgtgccgatggtgccgtggccgctc 18993447
Query: 481 ggcgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcg 540
||| |||||||||| |||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 18993448 tacgcggagcagcacttgaacgcgttcacgctggtggccgccatgggcgtggccgtggcc 18993507
Query: 541 ctgaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|||| ||||| ||||| |||| || ||||| |||||| ||||| ||||||| |||||
Sbjct: 18993508 atgaaggtggacaggaaacggaacaacttcgtcgaggcgtccgaggtggagcgcgcggt 18993566
Score = 161 bits (81), Expect = 1e-036
Identities = 171/201 (85%)
Strand = Plus / Minus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
|||||||||||||| || ||||||||||||||| || ||||||||||||||||||||
Sbjct: 19409435 gggctcgtgtggccgacgcgggcgccgcagaaggacatcctcgcccacgccgccgtgggc 19409376
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccg 462
|| ||||| |||||||| || |||||||| ||||||||||||||||| |||||||||
Sbjct: 19409375 gggttcgtgacgcactgcgggtggaactccatcctcgagagcctctggttcggcgtgccg 19409316
Query: 463 atggtgccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgac 522
||| ||||||||||||| | | |||||||||| ||||||||| ||||||| ||| |
Sbjct: 19409315 atgctgccatggccgctcgacaacgagcagcacgcgaacgcgttcctgctggtgtccgtc 19409256
Query: 523 atgggcgtcgccgtggcgctg 543
|||||||||||||| |||||
Sbjct: 19409255 ctgggcgtcgccgtgccgctg 19409235
Score = 153 bits (77), Expect = 2e-034
Identities = 197/237 (83%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || ||||||||||||||||||||||||||||| |||||| | ||
Sbjct: 19008326 ggcgccgcagaaggacatcctcgcccacgccgccgtgggaggcttcgtgacgcacggcgg 19008385
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 19008386 gtggaactcgacgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 19008445
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||| ||| |||||||||||||||||||| | |
Sbjct: 19008446 cgcggagcagcacctgaacgcgttcgagctcgtgcgcgacatgggcgtcgccgtggagat 19008505
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
| | ||||| |||||| || || || ||||||||| | ||||||||||| |||||
Sbjct: 19008506 ggaggtggacaggaagcggggcaacttggtggaggcggcggagctggagcgcgcggt 19008562
Score = 137 bits (69), Expect = 1e-029
Identities = 195/237 (82%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
|||||||||||||||||| ||||||||| | ||| | || |||||||| |||||| | ||
Sbjct: 18985457 ggcgccgcagaaggagatcctcgcccacccggccatcggcggcttcgtgacgcacggcgg 18985516
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 18985517 gtggaactcggtgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 18985576
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||||||| |||||||||||| |||||| ||||
Sbjct: 18985577 cgcggagcagcacctgaacgcgttcgagctggtgcgcgacatgggcgtggccgtgccgct 18985636
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
||||| ||| || || | || |||||||||||| | ||||||||||| |||||
Sbjct: 18985637 cggggtggacagggagcgggacaacttcgtggaggcggcggagctggagcgcgcggt 18985693
Score = 127 bits (64), Expect = 1e-026
Identities = 166/200 (83%)
Strand = Plus / Minus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
|||||||||||||| || |||||||||||||||||| ||||||||||||||| | ||
Sbjct: 18954946 gggctcgtgtggccgacgtgggcgccgcagaaggagatcctcgcccacgccgccatcggc 18954887
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccg 462
||||||| |||||||| || ||||||||| || |||||||| ||||| |||||||||
Sbjct: 18954886 agcttcgtgacgcactgcgggtggaactcgacgctggagagcctgtggcacggcgtgccg 18954827
Query: 463 atggtgccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgac 522
||||||| |||||||| ||| ||||||| | ||||||||| ||||||| ||||
Sbjct: 18954826 ctggtgccgtggccgctgtacgcggagcagcgcctgaacgcgttcgagctggtgcgcgac 18954767
Query: 523 atgggcgtcgccgtggcgct 542
|||||||| |||||| ||||
Sbjct: 18954766 atgggcgtggccgtgccgct 18954747
Score = 115 bits (58), Expect = 5e-023
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 101 cgcaggagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcctatgct 160
|||| ||||||||||| ||||||||| ||||||||||| |||||| |||||||| ||||
Sbjct: 18993065 cgcacgagtgcgtgcggtggctcgacgcgcagcctccggcctccgtcgtgttcctctgct 18993124
Query: 161 tcggcagcggtggctgcttcacggcgccccaagcgcacgagatagcgcacggcctggacc 220
|||| ||| ||| || || || |||| || | || |||| | |||||||||||||| |
Sbjct: 18993125 tcgggagcatgggcagcctcgcgccgccgcaggtgctcgaggtggcgcacggcctggaac 18993184
Query: 221 gcagcgggcatcgattcctgtgggtgctgcgcgg 254
|||||||||| || ||||||||||||||||||||
Sbjct: 18993185 gcagcgggcaccggttcctgtgggtgctgcgcgg 18993218
Score = 105 bits (53), Expect = 5e-020
Identities = 122/145 (84%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || || | |||||||||||||| || ||||| |||||||| ||
Sbjct: 22545163 ggcgccgcagaaggacatcctgggacacgccgccgtgggcgggttcgtgacgcactgcgg 22545222
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
|||||||||||| || |||||||| ||| ||||||||||||| | ||||||||||
Sbjct: 22545223 ctggaactcggtgctggagagcctgtggttcggcgtgccgatggcgacatggccgctcta 22545282
Query: 483 cgccgagcagcactacaacgcgttc 507
|| |||||||||| ||||||||||
Sbjct: 22545283 cggcgagcagcacctcaacgcgttc 22545307
Score = 99.6 bits (50), Expect = 3e-018
Identities = 136/165 (82%)
Strand = Plus / Minus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
|||||||||||||| ||||||||||| || ||||| || || |||||||| |||||||
Sbjct: 19401868 gccatcgccgacggccggtgcacgcgcggggtccccgcgccgacggtgtacccgatcggc 19401809
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
|||||| || ||| | | ||||| | ||| ||||| |||| ||||||||||| ||||||
Sbjct: 19401808 ccggtgctctccttccccccgccgccggaggagcagccgcacgagtgcgtgcggtggctc 19401749
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagc 168
||| ||||||| ||| |||||| | ||||| ||||||||||||
Sbjct: 19401748 gacgcgcagcccccggcgtccgtgctcttcctctgcttcggcagc 19401704
Score = 77.8 bits (39), Expect = 1e-011
Identities = 128/155 (82%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 101 cgcaggagtgcgtgcgctggctcgactcgcagcctccgagc-tccgtggtgttcctatgc 159
|||| ||||||||||| ||||||||| ||||||| | |||| || || |||||||| |||
Sbjct: 19008064 cgcacgagtgcgtgcggtggctcgacgcgcagccgc-gagcgtcggtcgtgttcctctgc 19008122
Query: 160 ttcggcagcggtggctgcttcacggcgccccaagcgcacgagatagcgcacggcctggac 219
||||| ||| ||| ||||| || |||| || | || ||||||||| |||||| ||
Sbjct: 19008123 ttcgggagcatgggcagcttcgcgccgccgcaggtgctcgagatagccgccggcctcgag 19008182
Query: 220 cgcagcgggcatcgattcctgtgggtgctgcgcgg 254
||||||||||| || ||||||||||||||||||||
Sbjct: 19008183 cgcagcgggcaccgcttcctgtgggtgctgcgcgg 19008217
Score = 63.9 bits (32), Expect = 2e-007
Identities = 132/165 (80%), Gaps = 3/165 (1%)
Strand = Plus / Minus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
|||||||||||||| ||||||||||| || || || || || |||||||| |||||||
Sbjct: 19409780 gccatcgccgacggccggtgcacgcgcggggtgcccgcgccgacggtgtacgcgatcggc 19409721
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
||||||||| | ||| ||||| | ||||||| |||| ||||||||||| |||||
Sbjct: 19409720 ccggtgatcgcgctcaccccgccgccggagcagc---cgcacgagtgcgtgcggtggctg 19409664
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagc 168
||| ||||||| ||| |||||| || || | ||||||||||||
Sbjct: 19409663 gacgcgcagcccccggcgtccgtgctgctcgtctgcttcggcagc 19409619
Score = 52.0 bits (26), Expect = 6e-004
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 95 agcaggcgcaggagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcc 154
||||| |||| ||||||||||| ||||||||| ||||||| || || ||||||||||
Sbjct: 22544895 agcagccgcacgagtgcgtgcggtggctcgacgcgcagccggcggcgtcggtggtgttcc 22544954
Query: 155 tatgcttcgg 164
| ||||||||
Sbjct: 22544955 tctgcttcgg 22544964
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 211 ggcctggaccgcagcgggcatcgattcctgtgggtgctgcgcgg 254
|||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 22545011 ggcctggagcgcagcggccaccgcttcctgtgggtcctgcgcgg 22545054
>dbj|AK059016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-A10, full
insert sequence
Length = 1501
Score = 180 bits (91), Expect = 1e-042
Identities = 247/299 (82%)
Strand = Plus / Plus
Query: 301 gagctgcttccggcggatttcttggcgaggacgaaggatagagggctcgtgtggcctacc 360
||||| || |||| || |||| ||| |||||||| || |||| ||||||||||| ||
Sbjct: 1017 gagcttctcccggagggtttcctggagaggacgacggggagagctctcgtgtggccgacg 1076
Query: 361 aaggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgt 420
|||||||||||||||||| ||||| |||||||||||||| || ||||| |||||| |
Sbjct: 1077 tgggcgccgcagaaggagatcctcgcgcacgccgccgtgggcgggttcgtgacgcacggc 1136
Query: 421 ggctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgctt 480
|| ||||||||| || |||||||| ||| ||||||||||||||||| ||||||||
Sbjct: 1137 gggtggaactcgacgctggagagcctgtggttcggcgtgccgatggtgccgtggccgctc 1196
Query: 481 ggcgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcg 540
||| |||||||||| |||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 1197 tacgcggagcagcacttgaacgcgttcacgctggtggccgccatgggcgtggccgtggcc 1256
Query: 541 ctgaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|||| ||||| ||||| |||| || ||||| |||||| ||||| ||||||| |||||
Sbjct: 1257 atgaaggtggacaggaaacggaacaacttcgtcgaggcgtccgaggtggagcgcgcggt 1315
Score = 115 bits (58), Expect = 5e-023
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 101 cgcaggagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcctatgct 160
|||| ||||||||||| ||||||||| ||||||||||| |||||| |||||||| ||||
Sbjct: 814 cgcacgagtgcgtgcggtggctcgacgcgcagcctccggcctccgtcgtgttcctctgct 873
Query: 161 tcggcagcggtggctgcttcacggcgccccaagcgcacgagatagcgcacggcctggacc 220
|||| ||| ||| || || || |||| || | || |||| | |||||||||||||| |
Sbjct: 874 tcgggagcatgggcagcctcgcgccgccgcaggtgctcgaggtggcgcacggcctggaac 933
Query: 221 gcagcgggcatcgattcctgtgggtgctgcgcgg 254
|||||||||| || ||||||||||||||||||||
Sbjct: 934 gcagcgggcaccggttcctgtgggtgctgcgcgg 967
>dbj|AK067710.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120G17, full
insert sequence
Length = 2031
Score = 180 bits (91), Expect = 1e-042
Identities = 247/299 (82%)
Strand = Plus / Plus
Query: 301 gagctgcttccggcggatttcttggcgaggacgaaggatagagggctcgtgtggcctacc 360
||||| || |||| || |||| ||| |||||||| || |||| ||||||||||| ||
Sbjct: 941 gagcttctcccggagggtttcctggagaggacgacggggagagctctcgtgtggccgacg 1000
Query: 361 aaggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgt 420
|||||||||||||||||| ||||| |||||||||||||| || ||||| |||||| |
Sbjct: 1001 tgggcgccgcagaaggagatcctcgcgcacgccgccgtgggcgggttcgtgacgcacggc 1060
Query: 421 ggctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgctt 480
|| ||||||||| || |||||||| ||| ||||||||||||||||| ||||||||
Sbjct: 1061 gggtggaactcgacgctggagagcctgtggttcggcgtgccgatggtgccgtggccgctc 1120
Query: 481 ggcgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcg 540
||| |||||||||| |||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 1121 tacgcggagcagcacttgaacgcgttcacgctggtggccgccatgggcgtggccgtggcc 1180
Query: 541 ctgaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|||| ||||| ||||| |||| || ||||| |||||| ||||| ||||||| |||||
Sbjct: 1181 atgaaggtggacaggaaacggaacaacttcgtcgaggcgtccgaggtggagcgcgcggt 1239
Score = 107 bits (54), Expect = 1e-020
Identities = 129/154 (83%)
Strand = Plus / Plus
Query: 101 cgcaggagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcctatgct 160
|||| ||||||||||| ||||||||| ||||||||||| |||||| |||||||| ||||
Sbjct: 738 cgcacgagtgcgtgcggtggctcgacgcgcagcctccggcctccgtcgtgttcctctgct 797
Query: 161 tcggcagcggtggctgcttcacggcgccccaagcgcacgagatagcgcacggcctggacc 220
|||| ||| ||| || || || |||| || | || | || | |||||||||||||| |
Sbjct: 798 tcgggagcatgggcagcctcgcgccgccgcaggtgctctaggtggcgcacggcctggaac 857
Query: 221 gcagcgggcatcgattcctgtgggtgctgcgcgg 254
|||||||||| || ||||||||||||||||||||
Sbjct: 858 gcagcgggcaccggttcctgtgggtgctgcgcgg 891
>dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0430F03
Length = 183095
Score = 180 bits (91), Expect = 1e-042
Identities = 247/299 (82%)
Strand = Plus / Plus
Query: 301 gagctgcttccggcggatttcttggcgaggacgaaggatagagggctcgtgtggcctacc 360
||||| || |||| || |||| ||| |||||||| || |||| ||||||||||| ||
Sbjct: 95253 gagcttctcccggagggtttcctggagaggacgacggggagagctctcgtgtggccgacg 95312
Query: 361 aaggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgt 420
|||||||||||||||||| ||||| |||||||||||||| || ||||| |||||| |
Sbjct: 95313 tgggcgccgcagaaggagatcctcgcgcacgccgccgtgggcgggttcgtgacgcacggc 95372
Query: 421 ggctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgctt 480
|| ||||||||| || |||||||| ||| ||||||||||||||||| ||||||||
Sbjct: 95373 gggtggaactcgacgctggagagcctgtggttcggcgtgccgatggtgccgtggccgctc 95432
Query: 481 ggcgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcg 540
||| |||||||||| |||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 95433 tacgcggagcagcacttgaacgcgttcacgctggtggccgccatgggcgtggccgtggcc 95492
Query: 541 ctgaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|||| ||||| ||||| |||| || ||||| |||||| ||||| ||||||| |||||
Sbjct: 95493 atgaaggtggacaggaaacggaacaacttcgtcgaggcgtccgaggtggagcgcgcggt 95551
Score = 153 bits (77), Expect = 2e-034
Identities = 197/237 (83%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || ||||||||||||||||||||||||||||| |||||| | ||
Sbjct: 110311 ggcgccgcagaaggacatcctcgcccacgccgccgtgggaggcttcgtgacgcacggcgg 110370
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 110371 gtggaactcgacgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 110430
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||| ||| |||||||||||||||||||| | |
Sbjct: 110431 cgcggagcagcacctgaacgcgttcgagctcgtgcgcgacatgggcgtcgccgtggagat 110490
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
| | ||||| |||||| || || || ||||||||| | ||||||||||| |||||
Sbjct: 110491 ggaggtggacaggaagcggggcaacttggtggaggcggcggagctggagcgcgcggt 110547
Score = 137 bits (69), Expect = 1e-029
Identities = 195/237 (82%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
|||||||||||||||||| ||||||||| | ||| | || |||||||| |||||| | ||
Sbjct: 87442 ggcgccgcagaaggagatcctcgcccacccggccatcggcggcttcgtgacgcacggcgg 87501
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 87502 gtggaactcggtgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 87561
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||||||| |||||||||||| |||||| ||||
Sbjct: 87562 cgcggagcagcacctgaacgcgttcgagctggtgcgcgacatgggcgtggccgtgccgct 87621
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
||||| ||| || || | || |||||||||||| | ||||||||||| |||||
Sbjct: 87622 cggggtggacagggagcgggacaacttcgtggaggcggcggagctggagcgcgcggt 87678
Score = 127 bits (64), Expect = 1e-026
Identities = 166/200 (83%)
Strand = Plus / Minus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
|||||||||||||| || |||||||||||||||||| ||||||||||||||| | ||
Sbjct: 56931 gggctcgtgtggccgacgtgggcgccgcagaaggagatcctcgcccacgccgccatcggc 56872
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccg 462
||||||| |||||||| || ||||||||| || |||||||| ||||| |||||||||
Sbjct: 56871 agcttcgtgacgcactgcgggtggaactcgacgctggagagcctgtggcacggcgtgccg 56812
Query: 463 atggtgccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgac 522
||||||| |||||||| ||| ||||||| | ||||||||| ||||||| ||||
Sbjct: 56811 ctggtgccgtggccgctgtacgcggagcagcgcctgaacgcgttcgagctggtgcgcgac 56752
Query: 523 atgggcgtcgccgtggcgct 542
|||||||| |||||| ||||
Sbjct: 56751 atgggcgtggccgtgccgct 56732
Score = 115 bits (58), Expect = 5e-023
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 101 cgcaggagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcctatgct 160
|||| ||||||||||| ||||||||| ||||||||||| |||||| |||||||| ||||
Sbjct: 95050 cgcacgagtgcgtgcggtggctcgacgcgcagcctccggcctccgtcgtgttcctctgct 95109
Query: 161 tcggcagcggtggctgcttcacggcgccccaagcgcacgagatagcgcacggcctggacc 220
|||| ||| ||| || || || |||| || | || |||| | |||||||||||||| |
Sbjct: 95110 tcgggagcatgggcagcctcgcgccgccgcaggtgctcgaggtggcgcacggcctggaac 95169
Query: 221 gcagcgggcatcgattcctgtgggtgctgcgcgg 254
|||||||||| || ||||||||||||||||||||
Sbjct: 95170 gcagcgggcaccggttcctgtgggtgctgcgcgg 95203
Score = 77.8 bits (39), Expect = 1e-011
Identities = 128/155 (82%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 101 cgcaggagtgcgtgcgctggctcgactcgcagcctccgagc-tccgtggtgttcctatgc 159
|||| ||||||||||| ||||||||| ||||||| | |||| || || |||||||| |||
Sbjct: 110049 cgcacgagtgcgtgcggtggctcgacgcgcagccgc-gagcgtcggtcgtgttcctctgc 110107
Query: 160 ttcggcagcggtggctgcttcacggcgccccaagcgcacgagatagcgcacggcctggac 219
||||| ||| ||| ||||| || |||| || | || ||||||||| |||||| ||
Sbjct: 110108 ttcgggagcatgggcagcttcgcgccgccgcaggtgctcgagatagccgccggcctcgag 110167
Query: 220 cgcagcgggcatcgattcctgtgggtgctgcgcgg 254
||||||||||| || ||||||||||||||||||||
Sbjct: 110168 cgcagcgggcaccgcttcctgtgggtgctgcgcgg 110202
>gb|AACV01016313.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016313, whole
genome shotgun sequence
Length = 27006
Score = 180 bits (91), Expect = 1e-042
Identities = 247/299 (82%)
Strand = Plus / Plus
Query: 301 gagctgcttccggcggatttcttggcgaggacgaaggatagagggctcgtgtggcctacc 360
||||| || |||| || |||| ||| |||||||| || |||| ||||||||||| ||
Sbjct: 13612 gagcttctcccggagggtttcctggagaggacgacggggagagctctcgtgtggccgacg 13671
Query: 361 aaggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgt 420
|||||||||||||||||| ||||| |||||||||||||| || ||||| |||||| |
Sbjct: 13672 tgggcgccgcagaaggagatcctcgcgcacgccgccgtgggcgggttcgtgacgcacggc 13731
Query: 421 ggctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgctt 480
|| ||||||||| || |||||||| ||| ||||||||||||||||| ||||||||
Sbjct: 13732 gggtggaactcgacgctggagagcctgtggttcggcgtgccgatggtgccgtggccgctc 13791
Query: 481 ggcgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcg 540
||| |||||||||| |||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 13792 tacgcggagcagcacttgaacgcgttcacgctggtggccgccatgggcgtggccgtggcc 13851
Query: 541 ctgaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|||| ||||| ||||| |||| || ||||| |||||| ||||| ||||||| |||||
Sbjct: 13852 atgaaggtggacaggaaacggaacaacttcgtcgaggcgtccgaggtggagcgcgcggt 13910
Score = 137 bits (69), Expect = 1e-029
Identities = 195/237 (82%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
|||||||||||||||||| ||||||||| | ||| | || |||||||| |||||| | ||
Sbjct: 5801 ggcgccgcagaaggagatcctcgcccacccggccatcggcggcttcgtgacgcacggcgg 5860
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 5861 gtggaactcggtgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 5920
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||||||| |||||||||||| |||||| ||||
Sbjct: 5921 cgcggagcagcacctgaacgcgttcgagctggtgcgcgacatgggcgtggccgtgccgct 5980
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
||||| ||| || || | || |||||||||||| | ||||||||||| |||||
Sbjct: 5981 cggggtggacagggagcgggacaacttcgtggaggcggcggagctggagcgcgcggt 6037
Score = 115 bits (58), Expect = 5e-023
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 101 cgcaggagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcctatgct 160
|||| ||||||||||| ||||||||| ||||||||||| |||||| |||||||| ||||
Sbjct: 13409 cgcacgagtgcgtgcggtggctcgacgcgcagcctccggcctccgtcgtgttcctctgct 13468
Query: 161 tcggcagcggtggctgcttcacggcgccccaagcgcacgagatagcgcacggcctggacc 220
|||| ||| ||| || || || |||| || | || |||| | |||||||||||||| |
Sbjct: 13469 tcgggagcatgggcagcctcgcgccgccgcaggtgctcgaggtggcgcacggcctggaac 13528
Query: 221 gcagcgggcatcgattcctgtgggtgctgcgcgg 254
|||||||||| || ||||||||||||||||||||
Sbjct: 13529 gcagcgggcaccggttcctgtgggtgctgcgcgg 13562
>ref|XM_478280.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1501
Score = 180 bits (91), Expect = 1e-042
Identities = 247/299 (82%)
Strand = Plus / Plus
Query: 301 gagctgcttccggcggatttcttggcgaggacgaaggatagagggctcgtgtggcctacc 360
||||| || |||| || |||| ||| |||||||| || |||| ||||||||||| ||
Sbjct: 1017 gagcttctcccggagggtttcctggagaggacgacggggagagctctcgtgtggccgacg 1076
Query: 361 aaggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgt 420
|||||||||||||||||| ||||| |||||||||||||| || ||||| |||||| |
Sbjct: 1077 tgggcgccgcagaaggagatcctcgcgcacgccgccgtgggcgggttcgtgacgcacggc 1136
Query: 421 ggctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgctt 480
|| ||||||||| || |||||||| ||| ||||||||||||||||| ||||||||
Sbjct: 1137 gggtggaactcgacgctggagagcctgtggttcggcgtgccgatggtgccgtggccgctc 1196
Query: 481 ggcgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcg 540
||| |||||||||| |||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 1197 tacgcggagcagcacttgaacgcgttcacgctggtggccgccatgggcgtggccgtggcc 1256
Query: 541 ctgaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
|||| ||||| ||||| |||| || ||||| |||||| ||||| ||||||| |||||
Sbjct: 1257 atgaaggtggacaggaaacggaacaacttcgtcgaggcgtccgaggtggagcgcgcggt 1315
Score = 115 bits (58), Expect = 5e-023
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 101 cgcaggagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcctatgct 160
|||| ||||||||||| ||||||||| ||||||||||| |||||| |||||||| ||||
Sbjct: 814 cgcacgagtgcgtgcggtggctcgacgcgcagcctccggcctccgtcgtgttcctctgct 873
Query: 161 tcggcagcggtggctgcttcacggcgccccaagcgcacgagatagcgcacggcctggacc 220
|||| ||| ||| || || || |||| || | || |||| | |||||||||||||| |
Sbjct: 874 tcgggagcatgggcagcctcgcgccgccgcaggtgctcgaggtggcgcacggcctggaac 933
Query: 221 gcagcgggcatcgattcctgtgggtgctgcgcgg 254
|||||||||| || ||||||||||||||||||||
Sbjct: 934 gcagcgggcaccggttcctgtgggtgctgcgcgg 967
>dbj|AK068586.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154E03, full
insert sequence
Length = 1914
Score = 161 bits (81), Expect = 1e-036
Identities = 171/201 (85%)
Strand = Plus / Plus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
|||||||||||||| || ||||||||||||||| || ||||||||||||||||||||
Sbjct: 1248 gggctcgtgtggccgacgcgggcgccgcagaaggacatcctcgcccacgccgccgtgggc 1307
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccg 462
|| ||||| |||||||| || |||||||| ||||||||||||||||| |||||||||
Sbjct: 1308 gggttcgtgacgcactgcgggtggaactccatcctcgagagcctctggttcggcgtgccg 1367
Query: 463 atggtgccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgac 522
||| ||||||||||||| | | |||||||||| ||||||||| ||||||| ||| |
Sbjct: 1368 atgctgccatggccgctcgacaacgagcagcacgcgaacgcgttcctgctggtgtccgtc 1427
Query: 523 atgggcgtcgccgtggcgctg 543
|||||||||||||| |||||
Sbjct: 1428 ctgggcgtcgccgtgccgctg 1448
Score = 63.9 bits (32), Expect = 2e-007
Identities = 132/165 (80%), Gaps = 3/165 (1%)
Strand = Plus / Plus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
|||||||||||||| ||||||||||| || || || || || |||||||| |||||||
Sbjct: 903 gccatcgccgacggccggtgcacgcgcggggtgcccgcgccgacggtgtacgcgatcggc 962
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
||||||||| | ||| ||||| | ||||||| |||| ||||||||||| |||||
Sbjct: 963 ccggtgatcgcgctcaccccgccgccggagcagc---cgcacgagtgcgtgcggtggctg 1019
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagc 168
||| ||||||| ||| |||||| || || | ||||||||||||
Sbjct: 1020 gacgcgcagcccccggcgtccgtgctgctcgtctgcttcggcagc 1064
>dbj|AK105478.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-A09, full
insert sequence
Length = 1638
Score = 161 bits (81), Expect = 1e-036
Identities = 171/201 (85%)
Strand = Plus / Minus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
|||||||||||||| || ||||||||||||||| || ||||||||||||||||||||
Sbjct: 418 gggctcgtgtggccgacgcgggcgccgcagaaggacatcctcgcccacgccgccgtgggc 359
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccg 462
|| ||||| |||||||| || |||||||| ||||||||||||||||| |||||||||
Sbjct: 358 gggttcgtgacgcactgcgggtggaactccatcctcgagagcctctggttcggcgtgccg 299
Query: 463 atggtgccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgac 522
||| ||||||||||||| | | |||||||||| ||||||||| ||||||| ||| |
Sbjct: 298 atgctgccatggccgctcgacaacgagcagcacgcgaacgcgttcctgctggtgtccgtc 239
Query: 523 atgggcgtcgccgtggcgctg 543
|||||||||||||| |||||
Sbjct: 238 ctgggcgtcgccgtgccgctg 218
Score = 63.9 bits (32), Expect = 2e-007
Identities = 132/165 (80%), Gaps = 3/165 (1%)
Strand = Plus / Minus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
|||||||||||||| ||||||||||| || || || || || |||||||| |||||||
Sbjct: 763 gccatcgccgacggccggtgcacgcgcggggtgcccgcgccgacggtgtacgcgatcggc 704
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
||||||||| | ||| ||||| | ||||||| |||| ||||||||||| |||||
Sbjct: 703 ccggtgatcgcgctcaccccgccgccggagcagc---cgcacgagtgcgtgcggtggctg 647
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagc 168
||| ||||||| ||| |||||| || || | ||||||||||||
Sbjct: 646 gacgcgcagcccccggcgtccgtgctgctcgtctgcttcggcagc 602
>ref|XM_478348.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1914
Score = 161 bits (81), Expect = 1e-036
Identities = 171/201 (85%)
Strand = Plus / Plus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
|||||||||||||| || ||||||||||||||| || ||||||||||||||||||||
Sbjct: 1249 gggctcgtgtggccgacgcgggcgccgcagaaggacatcctcgcccacgccgccgtgggc 1308
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccg 462
|| ||||| |||||||| || |||||||| ||||||||||||||||| |||||||||
Sbjct: 1309 gggttcgtgacgcactgcgggtggaactccatcctcgagagcctctggttcggcgtgccg 1368
Query: 463 atggtgccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgac 522
||| ||||||||||||| | | |||||||||| ||||||||| ||||||| ||| |
Sbjct: 1369 atgctgccatggccgctcgacaacgagcagcacgcgaacgcgttcctgctggtgtccgtc 1428
Query: 523 atgggcgtcgccgtggcgctg 543
|||||||||||||| |||||
Sbjct: 1429 ctgggcgtcgccgtgccgctg 1449
Score = 63.9 bits (32), Expect = 2e-007
Identities = 132/165 (80%), Gaps = 3/165 (1%)
Strand = Plus / Plus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
|||||||||||||| ||||||||||| || || || || || |||||||| |||||||
Sbjct: 904 gccatcgccgacggccggtgcacgcgcggggtgcccgcgccgacggtgtacgcgatcggc 963
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
||||||||| | ||| ||||| | ||||||| |||| ||||||||||| |||||
Sbjct: 964 ccggtgatcgcgctcaccccgccgccggagcagc---cgcacgagtgcgtgcggtggctg 1020
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagc 168
||| ||||||| ||| |||||| || || | ||||||||||||
Sbjct: 1021 gacgcgcagcccccggcgtccgtgctgctcgtctgcttcggcagc 1065
>ref|XM_478349.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1639
Score = 161 bits (81), Expect = 1e-036
Identities = 171/201 (85%)
Strand = Plus / Minus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
|||||||||||||| || ||||||||||||||| || ||||||||||||||||||||
Sbjct: 419 gggctcgtgtggccgacgcgggcgccgcagaaggacatcctcgcccacgccgccgtgggc 360
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccg 462
|| ||||| |||||||| || |||||||| ||||||||||||||||| |||||||||
Sbjct: 359 gggttcgtgacgcactgcgggtggaactccatcctcgagagcctctggttcggcgtgccg 300
Query: 463 atggtgccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgac 522
||| ||||||||||||| | | |||||||||| ||||||||| ||||||| ||| |
Sbjct: 299 atgctgccatggccgctcgacaacgagcagcacgcgaacgcgttcctgctggtgtccgtc 240
Query: 523 atgggcgtcgccgtggcgctg 543
|||||||||||||| |||||
Sbjct: 239 ctgggcgtcgccgtgccgctg 219
Score = 63.9 bits (32), Expect = 2e-007
Identities = 132/165 (80%), Gaps = 3/165 (1%)
Strand = Plus / Minus
Query: 4 gccatcgccgacgggcggtgcacgcgtggtgtcccggcacctccggtgtactcgatcggg 63
|||||||||||||| ||||||||||| || || || || || |||||||| |||||||
Sbjct: 764 gccatcgccgacggccggtgcacgcgcggggtgcccgcgccgacggtgtacgcgatcggc 705
Query: 64 ccggtgatcccctccacnccgcccgccgagcagcaggcgcaggagtgcgtgcgctggctc 123
||||||||| | ||| ||||| | ||||||| |||| ||||||||||| |||||
Sbjct: 704 ccggtgatcgcgctcaccccgccgccggagcagc---cgcacgagtgcgtgcggtggctg 648
Query: 124 gactcgcagcctccgagctccgtggtgttcctatgcttcggcagc 168
||| ||||||| ||| |||||| || || | ||||||||||||
Sbjct: 647 gacgcgcagcccccggcgtccgtgctgctcgtctgcttcggcagc 603
>dbj|AK105261.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-A09, full
insert sequence
Length = 1785
Score = 153 bits (77), Expect = 2e-034
Identities = 197/237 (83%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || ||||||||||||||||||||||||||||| |||||| | ||
Sbjct: 1144 ggcgccgcagaaggacatcctcgcccacgccgccgtgggaggcttcgtgacgcacggcgg 1203
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 1204 gtggaactcgacgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 1263
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||| ||| |||||||||||||||||||| | |
Sbjct: 1264 cgcggagcagcacctgaacgcgttcgagctcgtgcgcgacatgggcgtcgccgtggagat 1323
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
| | ||||| |||||| || || || ||||||||| | ||||||||||| |||||
Sbjct: 1324 ggaggtggacaggaagcggggcaacttggtggaggcggcggagctggagcgcgcggt 1380
Score = 77.8 bits (39), Expect = 1e-011
Identities = 128/155 (82%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 101 cgcaggagtgcgtgcgctggctcgactcgcagcctccgagc-tccgtggtgttcctatgc 159
|||| ||||||||||| ||||||||| ||||||| | |||| || || |||||||| |||
Sbjct: 882 cgcacgagtgcgtgcggtggctcgacgcgcagccgc-gagcgtcggtcgtgttcctctgc 940
Query: 160 ttcggcagcggtggctgcttcacggcgccccaagcgcacgagatagcgcacggcctggac 219
||||| ||| ||| ||||| || |||| || | || ||||||||| |||||| ||
Sbjct: 941 ttcgggagcatgggcagcttcgcgccgccgcaggtgctcgagatagccgccggcctcgag 1000
Query: 220 cgcagcgggcatcgattcctgtgggtgctgcgcgg 254
||||||||||| || ||||||||||||||||||||
Sbjct: 1001 cgcagcgggcaccgcttcctgtgggtgctgcgcgg 1035
>gb|AACV01016314.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016314, whole
genome shotgun sequence
Length = 2223
Score = 153 bits (77), Expect = 2e-034
Identities = 197/237 (83%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || ||||||||||||||||||||||||||||| |||||| | ||
Sbjct: 1228 ggcgccgcagaaggacatcctcgcccacgccgccgtgggaggcttcgtgacgcacggcgg 1287
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 1288 gtggaactcgacgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 1347
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||| ||| |||||||||||||||||||| | |
Sbjct: 1348 cgcggagcagcacctgaacgcgttcgagctcgtgcgcgacatgggcgtcgccgtggagat 1407
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
| | ||||| |||||| || || || ||||||||| | ||||||||||| |||||
Sbjct: 1408 ggaggtggacaggaagcggggcaacttggtggaggcggcggagctggagcgcgcggt 1464
Score = 77.8 bits (39), Expect = 1e-011
Identities = 128/155 (82%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 101 cgcaggagtgcgtgcgctggctcgactcgcagcctccgagc-tccgtggtgttcctatgc 159
|||| ||||||||||| ||||||||| ||||||| | |||| || || |||||||| |||
Sbjct: 964 cgcacgagtgcgtgcggtggctcgacgcgcagccgc-gagcgtcggtcgtgttcctctgc 1022
Query: 160 ttcggcagcggtggctgcttcacggcgccccaagcgcacgagatagcgcacggcctggac 219
||||| ||| ||| ||||| || |||| || | || ||||||||| |||||| ||
Sbjct: 1023 ttcgggagcatgggcagcttcgcgccgccgcaggtgctcgagatagccgccggcctcgag 1082
Query: 220 cgcagcgggcatcgattcctgtgggtgctgcgcgg 254
||||||||||| || ||||||||||||||||||||
Sbjct: 1083 cgcagcgggcaccgcttcctgtgggtgctgcgcgg 1117
>ref|XM_478285.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1785
Score = 153 bits (77), Expect = 2e-034
Identities = 197/237 (83%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || ||||||||||||||||||||||||||||| |||||| | ||
Sbjct: 1144 ggcgccgcagaaggacatcctcgcccacgccgccgtgggaggcttcgtgacgcacggcgg 1203
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 1204 gtggaactcgacgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 1263
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||| ||| |||||||||||||||||||| | |
Sbjct: 1264 cgcggagcagcacctgaacgcgttcgagctcgtgcgcgacatgggcgtcgccgtggagat 1323
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
| | ||||| |||||| || || || ||||||||| | ||||||||||| |||||
Sbjct: 1324 ggaggtggacaggaagcggggcaacttggtggaggcggcggagctggagcgcgcggt 1380
Score = 77.8 bits (39), Expect = 1e-011
Identities = 128/155 (82%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 101 cgcaggagtgcgtgcgctggctcgactcgcagcctccgagc-tccgtggtgttcctatgc 159
|||| ||||||||||| ||||||||| ||||||| | |||| || || |||||||| |||
Sbjct: 882 cgcacgagtgcgtgcggtggctcgacgcgcagccgc-gagcgtcggtcgtgttcctctgc 940
Query: 160 ttcggcagcggtggctgcttcacggcgccccaagcgcacgagatagcgcacggcctggac 219
||||| ||| ||| ||||| || |||| || | || ||||||||| |||||| ||
Sbjct: 941 ttcgggagcatgggcagcttcgcgccgccgcaggtgctcgagatagccgccggcctcgag 1000
Query: 220 cgcagcgggcatcgattcctgtgggtgctgcgcgg 254
||||||||||| || ||||||||||||||||||||
Sbjct: 1001 cgcagcgggcaccgcttcctgtgggtgctgcgcgg 1035
>gb|CB637106.1|CB637106 OSJNEa03E20.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa03E20 3', mRNA sequence
Length = 608
Score = 145 bits (73), Expect = 6e-032
Identities = 196/237 (82%)
Strand = Plus / Minus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
|||||||||||||||||| ||||||||| | ||| | || |||||||| |||||| | ||
Sbjct: 572 ggcgccgcagaaggagatcctcgcccacccggccatcggcggcttcgtgacgcacggcgg 513
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 512 gtggaactcggtgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 453
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| |||||||||| ||||||||| ||||||| |||||||||||| |||||| ||||
Sbjct: 452 cgcggagcagcacttgaacgcgttcgagctggtgcgcgacatgggcgtggccgtgccgct 393
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
||||| ||| || || | || |||||||||||| | ||||||||||| |||||
Sbjct: 392 cggggtggacagggagcgggacaacttcgtggaggcggcggagctggagcgcgcggt 336
>dbj|AP004400.1| Oryza sativa (japonica cultivar-group) chromosome 7 clone P0506H09,
*** SEQUENCING IN PROGRESS ***
Length = 146154
Score = 137 bits (69), Expect = 1e-029
Identities = 195/237 (82%)
Strand = Plus / Minus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
|||||||||||||||||| ||||||||| | ||| | || |||||||| |||||| | ||
Sbjct: 1538 ggcgccgcagaaggagatcctcgcccacccggccatcggcggcttcgtgacgcacggcgg 1479
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 1478 gtggaactcggtgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 1419
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||||||| |||||||||||| |||||| ||||
Sbjct: 1418 cgcggagcagcacctgaacgcgttcgagctggtgcgcgacatgggcgtggccgtgccgct 1359
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
||||| ||| || || | || |||||||||||| | ||||||||||| |||||
Sbjct: 1358 cggggtggacagggagcgggacaacttcgtggaggcggcggagctggagcgcgcggt 1302
Score = 127 bits (64), Expect = 1e-026
Identities = 166/200 (83%)
Strand = Plus / Plus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
|||||||||||||| || |||||||||||||||||| ||||||||||||||| | ||
Sbjct: 32156 gggctcgtgtggccgacgtgggcgccgcagaaggagatcctcgcccacgccgccatcggc 32215
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccg 462
||||||| |||||||| || ||||||||| || |||||||| ||||| |||||||||
Sbjct: 32216 agcttcgtgacgcactgcgggtggaactcgacgctggagagcctgtggcacggcgtgccg 32275
Query: 463 atggtgccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgac 522
||||||| |||||||| ||| ||||||| | ||||||||| ||||||| ||||
Sbjct: 32276 ctggtgccgtggccgctgtacgcggagcagcgcctgaacgcgttcgagctggtgcgcgac 32335
Query: 523 atgggcgtcgccgtggcgct 542
|||||||| |||||| ||||
Sbjct: 32336 atgggcgtggccgtgccgct 32355
>dbj|AK064324.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F04, full
insert sequence
Length = 1747
Score = 137 bits (69), Expect = 1e-029
Identities = 195/237 (82%)
Strand = Plus / Minus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
|||||||||||||||||| ||||||||| | ||| | || |||||||| |||||| | ||
Sbjct: 535 ggcgccgcagaaggagatcctcgcccacccggccatcggcggcttcgtgacgcacggcgg 476
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 475 gtggaactcggtgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 416
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||||||| |||||||||||| |||||| ||||
Sbjct: 415 cgcggagcagcacctgaacgcgttcgagctggtgcgcgacatgggcgtggccgtgccgct 356
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
||||| ||| || || | || |||||||||||| | ||||||||||| |||||
Sbjct: 355 cggggtggacagggagcgggacaacttcgtggaggcggcggagctggagcgcgcggt 299
>dbj|AK099344.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028A15, full
insert sequence
Length = 1640
Score = 137 bits (69), Expect = 1e-029
Identities = 195/237 (82%)
Strand = Plus / Minus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
|||||||||||||||||| ||||||||| | ||| | || |||||||| |||||| | ||
Sbjct: 433 ggcgccgcagaaggagatcctcgcccacccggccatcggcggcttcgtgacgcacggcgg 374
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 373 gtggaactcggtgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 314
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||||||| |||||||||||| |||||| ||||
Sbjct: 313 cgcggagcagcacctgaacgcgttcgagctggtgcgcgacatgggcgtggccgtgccgct 254
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
||||| ||| || || | || |||||||||||| | ||||||||||| |||||
Sbjct: 253 cggggtggacagggagcgggacaacttcgtggaggcggcggagctggagcgcgcggt 197
>dbj|AK101518.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046I03, full
insert sequence
Length = 1790
Score = 137 bits (69), Expect = 1e-029
Identities = 195/237 (82%)
Strand = Plus / Minus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
|||||||||||||||||| ||||||||| | ||| | || |||||||| |||||| | ||
Sbjct: 490 ggcgccgcagaaggagatcctcgcccacccggccatcggcggcttcgtgacgcacggcgg 431
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 430 gtggaactcggtgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 371
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||||||| |||||||||||| |||||| ||||
Sbjct: 370 cgcggagcagcacctgaacgcgttcgagctggtgcgcgacatgggcgtggccgtgccgct 311
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
||||| ||| || || | || |||||||||||| | ||||||||||| |||||
Sbjct: 310 cggggtggacagggagcgggacaacttcgtggaggcggcggagctggagcgcgcggt 254
>dbj|AK105785.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-G10, full
insert sequence
Length = 1709
Score = 137 bits (69), Expect = 1e-029
Identities = 195/237 (82%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
|||||||||||||||||| ||||||||| | ||| | || |||||||| |||||| | ||
Sbjct: 1146 ggcgccgcagaaggagatcctcgcccacccggccatcggcggcttcgtgacgcacggcgg 1205
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 1206 gtggaactcggtgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 1265
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||||||| |||||||||||| |||||| ||||
Sbjct: 1266 cgcggagcagcacctgaacgcgttcgagctggtgcgcgacatgggcgtggccgtgccgct 1325
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
||||| ||| || || | || |||||||||||| | ||||||||||| |||||
Sbjct: 1326 cggggtggacagggagcgggacaacttcgtggaggcggcggagctggagcgcgcggt 1382
>dbj|AK106005.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-A05, full
insert sequence
Length = 1686
Score = 137 bits (69), Expect = 1e-029
Identities = 195/237 (82%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
|||||||||||||||||| ||||||||| | ||| | || |||||||| |||||| | ||
Sbjct: 1116 ggcgccgcagaaggagatcctcgcccacccggccatcggcggcttcgtgacgcacggcgg 1175
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 1176 gtggaactcggtgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 1235
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||||||| |||||||||||| |||||| ||||
Sbjct: 1236 cgcggagcagcacctgaacgcgttcgagctggtgcgcgacatgggcgtggccgtgccgct 1295
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
||||| ||| || || | || |||||||||||| | ||||||||||| |||||
Sbjct: 1296 cggggtggacagggagcgggacaacttcgtggaggcggcggagctggagcgcgcggt 1352
>ref|XM_478277.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1686
Score = 137 bits (69), Expect = 1e-029
Identities = 195/237 (82%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
|||||||||||||||||| ||||||||| | ||| | || |||||||| |||||| | ||
Sbjct: 1116 ggcgccgcagaaggagatcctcgcccacccggccatcggcggcttcgtgacgcacggcgg 1175
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 1176 gtggaactcggtgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 1235
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||||||| |||||||||||| |||||| ||||
Sbjct: 1236 cgcggagcagcacctgaacgcgttcgagctggtgcgcgacatgggcgtggccgtgccgct 1295
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
||||| ||| || || | || |||||||||||| | ||||||||||| |||||
Sbjct: 1296 cggggtggacagggagcgggacaacttcgtggaggcggcggagctggagcgcgcggt 1352
>ref|XM_478278.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1641
Score = 137 bits (69), Expect = 1e-029
Identities = 195/237 (82%)
Strand = Plus / Minus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
|||||||||||||||||| ||||||||| | ||| | || |||||||| |||||| | ||
Sbjct: 434 ggcgccgcagaaggagatcctcgcccacccggccatcggcggcttcgtgacgcacggcgg 375
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 374 gtggaactcggtgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 315
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||||||| |||||||||||| |||||| ||||
Sbjct: 314 cgcggagcagcacctgaacgcgttcgagctggtgcgcgacatgggcgtggccgtgccgct 255
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
||||| ||| || || | || |||||||||||| | ||||||||||| |||||
Sbjct: 254 cggggtggacagggagcgggacaacttcgtggaggcggcggagctggagcgcgcggt 198
>ref|XM_506356.1| PREDICTED Oryza sativa (japonica cultivar-group), P0430F03.24 mRNA
Length = 1709
Score = 137 bits (69), Expect = 1e-029
Identities = 195/237 (82%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
|||||||||||||||||| ||||||||| | ||| | || |||||||| |||||| | ||
Sbjct: 1146 ggcgccgcagaaggagatcctcgcccacccggccatcggcggcttcgtgacgcacggcgg 1205
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 1206 gtggaactcggtgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 1265
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||||||| |||||||||||| |||||| ||||
Sbjct: 1266 cgcggagcagcacctgaacgcgttcgagctggtgcgcgacatgggcgtggccgtgccgct 1325
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
||||| ||| || || | || |||||||||||| | ||||||||||| |||||
Sbjct: 1326 cggggtggacagggagcgggacaacttcgtggaggcggcggagctggagcgcgcggt 1382
>ref|XM_506357.2| PREDICTED Oryza sativa (japonica cultivar-group), P0430F03.25 mRNA
Length = 1790
Score = 137 bits (69), Expect = 1e-029
Identities = 195/237 (82%)
Strand = Plus / Minus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
|||||||||||||||||| ||||||||| | ||| | || |||||||| |||||| | ||
Sbjct: 491 ggcgccgcagaaggagatcctcgcccacccggccatcggcggcttcgtgacgcacggcgg 432
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 431 gtggaactcggtgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 372
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||||||| |||||||||||| |||||| ||||
Sbjct: 371 cgcggagcagcacctgaacgcgttcgagctggtgcgcgacatgggcgtggccgtgccgct 312
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
||||| ||| || || | || |||||||||||| | ||||||||||| |||||
Sbjct: 311 cggggtggacagggagcgggacaacttcgtggaggcggcggagctggagcgcgcggt 255
>ref|XM_507364.1| PREDICTED Oryza sativa (japonica cultivar-group), P0430F03.25 mRNA
Length = 1747
Score = 137 bits (69), Expect = 1e-029
Identities = 195/237 (82%)
Strand = Plus / Minus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
|||||||||||||||||| ||||||||| | ||| | || |||||||| |||||| | ||
Sbjct: 535 ggcgccgcagaaggagatcctcgcccacccggccatcggcggcttcgtgacgcacggcgg 476
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
||||||||||| || |||||||| ||||| ||||||||||||| ||| ||||||||
Sbjct: 475 gtggaactcggtgctggagagcctgtggcacggcgtgccgatggcgccgtggccgctgta 416
Query: 483 cgccgagcagcactacaacgcgttcacgctggtggccgacatgggcgtcgccgtggcgct 542
||| ||||||||| ||||||||| ||||||| |||||||||||| |||||| ||||
Sbjct: 415 cgcggagcagcacctgaacgcgttcgagctggtgcgcgacatgggcgtggccgtgccgct 356
Query: 543 gaacgtggaaaggaagaggaagaatttcgtggaggcgaccgagctggagcgagcggt 599
||||| ||| || || | || |||||||||||| | ||||||||||| |||||
Sbjct: 355 cggggtggacagggagcgggacaacttcgtggaggcggcggagctggagcgcgcggt 299
>gb|AACV01016311.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016311, whole
genome shotgun sequence
Length = 7765
Score = 127 bits (64), Expect = 1e-026
Identities = 166/200 (83%)
Strand = Plus / Minus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
|||||||||||||| || |||||||||||||||||| ||||||||||||||| | ||
Sbjct: 6375 gggctcgtgtggccgacgtgggcgccgcagaaggagatcctcgcccacgccgccatcggc 6316
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccg 462
||||||| |||||||| || ||||||||| || |||||||| ||||| |||||||||
Sbjct: 6315 agcttcgtgacgcactgcgggtggaactcgacgctggagagcctgtggcacggcgtgccg 6256
Query: 463 atggtgccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgac 522
||||||| |||||||| ||| ||||||| | ||||||||| ||||||| ||||
Sbjct: 6255 ctggtgccgtggccgctgtacgcggagcagcgcctgaacgcgttcgagctggtgcgcgac 6196
Query: 523 atgggcgtcgccgtggcgct 542
|||||||| |||||| ||||
Sbjct: 6195 atgggcgtggccgtgccgct 6176
>ref|XM_478273.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1464
Score = 127 bits (64), Expect = 1e-026
Identities = 166/200 (83%)
Strand = Plus / Plus
Query: 343 gggctcgtgtggcctaccaaggcgccgcagaaggagatactcgcccacgccgccgtggga 402
|||||||||||||| || |||||||||||||||||| ||||||||||||||| | ||
Sbjct: 1033 gggctcgtgtggccgacgtgggcgccgcagaaggagatcctcgcccacgccgccatcggc 1092
Query: 403 ggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgtgccg 462
||||||| |||||||| || ||||||||| || |||||||| ||||| |||||||||
Sbjct: 1093 agcttcgtgacgcactgcgggtggaactcgacgctggagagcctgtggcacggcgtgccg 1152
Query: 463 atggtgccatggccgcttggcgccgagcagcactacaacgcgttcacgctggtggccgac 522
||||||| |||||||| ||| ||||||| | ||||||||| ||||||| ||||
Sbjct: 1153 ctggtgccgtggccgctgtacgcggagcagcgcctgaacgcgttcgagctggtgcgcgac 1212
Query: 523 atgggcgtcgccgtggcgct 542
|||||||| |||||| ||||
Sbjct: 1213 atgggcgtggccgtgccgct 1232
>gb|AC093094.3| Oryza sativa (japonica cultivar-group) chromosome 7 clone
OSJNBb0088N21, 4 unordered pieces
Length = 137967
Score = 105 bits (53), Expect = 5e-020
Identities = 122/145 (84%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || || | |||||||||||||| || ||||| |||||||| ||
Sbjct: 75707 ggcgccgcagaaggacatcctgggacacgccgccgtgggcgggttcgtgacgcactgcgg 75766
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
|||||||||||| || |||||||| ||| ||||||||||||| | ||||||||||
Sbjct: 75767 ctggaactcggtgctggagagcctgtggttcggcgtgccgatggcgacatggccgctcta 75826
Query: 483 cgccgagcagcactacaacgcgttc 507
|| |||||||||| ||||||||||
Sbjct: 75827 cggcgagcagcacctcaacgcgttc 75851
Score = 52.0 bits (26), Expect = 6e-004
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 95 agcaggcgcaggagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcc 154
||||| |||| ||||||||||| ||||||||| ||||||| || || ||||||||||
Sbjct: 75439 agcagccgcacgagtgcgtgcggtggctcgacgcgcagccggcggcgtcggtggtgttcc 75498
Query: 155 tatgcttcgg 164
| ||||||||
Sbjct: 75499 tctgcttcgg 75508
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 211 ggcctggaccgcagcgggcatcgattcctgtgggtgctgcgcgg 254
|||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 75555 ggcctggagcgcagcggccaccgcttcctgtgggtcctgcgcgg 75598
>dbj|AK107291.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-B11, full
insert sequence
Length = 1688
Score = 105 bits (53), Expect = 5e-020
Identities = 122/145 (84%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || || | |||||||||||||| || ||||| |||||||| ||
Sbjct: 1087 ggcgccgcagaaggacatcctgggacacgccgccgtgggcgggttcgtgacgcactgcgg 1146
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
|||||||||||| || |||||||| ||| ||||||||||||| | ||||||||||
Sbjct: 1147 ctggaactcggtgctggagagcctgtggttcggcgtgccgatggcgacatggccgctcta 1206
Query: 483 cgccgagcagcactacaacgcgttc 507
|| |||||||||| ||||||||||
Sbjct: 1207 cggcgagcagcacctcaacgcgttc 1231
Score = 52.0 bits (26), Expect = 6e-004
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 95 agcaggcgcaggagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcc 154
||||| |||| ||||||||||| ||||||||| ||||||| || || ||||||||||
Sbjct: 819 agcagccgcacgagtgcgtgcggtggctcgacgcgcagccggcggcgtcggtggtgttcc 878
Query: 155 tatgcttcgg 164
| ||||||||
Sbjct: 879 tctgcttcgg 888
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 211 ggcctggaccgcagcgggcatcgattcctgtgggtgctgcgcgg 254
|||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 935 ggcctggagcgcagcggccaccgcttcctgtgggtcctgcgcgg 978
>dbj|AP003705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1112_E08
Length = 119926
Score = 105 bits (53), Expect = 5e-020
Identities = 122/145 (84%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || || | |||||||||||||| || ||||| |||||||| ||
Sbjct: 25545 ggcgccgcagaaggacatcctgggacacgccgccgtgggcgggttcgtgacgcactgcgg 25604
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
|||||||||||| || |||||||| ||| ||||||||||||| | ||||||||||
Sbjct: 25605 ctggaactcggtgctggagagcctgtggttcggcgtgccgatggcgacatggccgctcta 25664
Query: 483 cgccgagcagcactacaacgcgttc 507
|| |||||||||| ||||||||||
Sbjct: 25665 cggcgagcagcacctcaacgcgttc 25689
Score = 52.0 bits (26), Expect = 6e-004
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 95 agcaggcgcaggagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcc 154
||||| |||| ||||||||||| ||||||||| ||||||| || || ||||||||||
Sbjct: 25277 agcagccgcacgagtgcgtgcggtggctcgacgcgcagccggcggcgtcggtggtgttcc 25336
Query: 155 tatgcttcgg 164
| ||||||||
Sbjct: 25337 tctgcttcgg 25346
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 211 ggcctggaccgcagcgggcatcgattcctgtgggtgctgcgcgg 254
|||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 25393 ggcctggagcgcagcggccaccgcttcctgtgggtcctgcgcgg 25436
>dbj|AP005296.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1720_F04
Length = 105227
Score = 105 bits (53), Expect = 5e-020
Identities = 122/145 (84%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || || | |||||||||||||| || ||||| |||||||| ||
Sbjct: 88651 ggcgccgcagaaggacatcctgggacacgccgccgtgggcgggttcgtgacgcactgcgg 88710
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
|||||||||||| || |||||||| ||| ||||||||||||| | ||||||||||
Sbjct: 88711 ctggaactcggtgctggagagcctgtggttcggcgtgccgatggcgacatggccgctcta 88770
Query: 483 cgccgagcagcactacaacgcgttc 507
|| |||||||||| ||||||||||
Sbjct: 88771 cggcgagcagcacctcaacgcgttc 88795
Score = 52.0 bits (26), Expect = 6e-004
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 95 agcaggcgcaggagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcc 154
||||| |||| ||||||||||| ||||||||| ||||||| || || ||||||||||
Sbjct: 88383 agcagccgcacgagtgcgtgcggtggctcgacgcgcagccggcggcgtcggtggtgttcc 88442
Query: 155 tatgcttcgg 164
| ||||||||
Sbjct: 88443 tctgcttcgg 88452
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 211 ggcctggaccgcagcgggcatcgattcctgtgggtgctgcgcgg 254
|||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 88499 ggcctggagcgcagcggccaccgcttcctgtgggtcctgcgcgg 88542
>gb|AACV01016586.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016586, whole
genome shotgun sequence
Length = 11467
Score = 105 bits (53), Expect = 5e-020
Identities = 122/145 (84%)
Strand = Plus / Minus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || || | |||||||||||||| || ||||| |||||||| ||
Sbjct: 9926 ggcgccgcagaaggacatcctgggacacgccgccgtgggcgggttcgtgacgcactgcgg 9867
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
|||||||||||| || |||||||| ||| ||||||||||||| | ||||||||||
Sbjct: 9866 ctggaactcggtgctggagagcctgtggttcggcgtgccgatggcgacatggccgctcta 9807
Query: 483 cgccgagcagcactacaacgcgttc 507
|| |||||||||| ||||||||||
Sbjct: 9806 cggcgagcagcacctcaacgcgttc 9782
Score = 52.0 bits (26), Expect = 6e-004
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 95 agcaggcgcaggagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcc 154
||||| |||| ||||||||||| ||||||||| ||||||| || || ||||||||||
Sbjct: 10194 agcagccgcacgagtgcgtgcggtggctcgacgcgcagccggcggcgtcggtggtgttcc 10135
Query: 155 tatgcttcgg 164
| ||||||||
Sbjct: 10134 tctgcttcgg 10125
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 211 ggcctggaccgcagcgggcatcgattcctgtgggtgctgcgcgg 254
|||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 10078 ggcctggagcgcagcggccaccgcttcctgtgggtcctgcgcgg 10035
>ref|NM_186324.2| Oryza sativa (japonica cultivar-group), mRNA
Length = 1688
Score = 105 bits (53), Expect = 5e-020
Identities = 122/145 (84%)
Strand = Plus / Plus
Query: 363 ggcgccgcagaaggagatactcgcccacgccgccgtgggaggcttcgtcacgcactgtgg 422
||||||||||||||| || || | |||||||||||||| || ||||| |||||||| ||
Sbjct: 1087 ggcgccgcagaaggacatcctgggacacgccgccgtgggcgggttcgtgacgcactgcgg 1146
Query: 423 ctggaactcggtcctcgagagcctctggcatggcgtgccgatggtgccatggccgcttgg 482
|||||||||||| || |||||||| ||| ||||||||||||| | ||||||||||
Sbjct: 1147 ctggaactcggtgctggagagcctgtggttcggcgtgccgatggcgacatggccgctcta 1206
Query: 483 cgccgagcagcactacaacgcgttc 507
|| |||||||||| ||||||||||
Sbjct: 1207 cggcgagcagcacctcaacgcgttc 1231
Score = 52.0 bits (26), Expect = 6e-004
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 95 agcaggcgcaggagtgcgtgcgctggctcgactcgcagcctccgagctccgtggtgttcc 154
||||| |||| ||||||||||| ||||||||| ||||||| || || ||||||||||
Sbjct: 819 agcagccgcacgagtgcgtgcggtggctcgacgcgcagccggcggcgtcggtggtgttcc 878
Query: 155 tatgcttcgg 164
| ||||||||
Sbjct: 879 tctgcttcgg 888
Score = 48.1 bits (24), Expect = 0.010
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 211 ggcctggaccgcagcgggcatcgattcctgtgggtgctgcgcgg 254
|||||||| |||||||| || || ||||||||||| ||||||||
Sbjct: 935 ggcctggagcgcagcggccaccgcttcctgtgggtcctgcgcgg 978
>gb|AU096467.1|AU096467 AU096467 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S13775, mRNA sequence
Length = 590
Score = 101 bits (51), Expect = 8e-019
Identities = 171/211 (81%), Gaps = 1/211 (0%)
Strand = Plus / Plus
Query: 389 acgccgccgtgggaggcttcgtcacgcactgtggctggaactcggtcctcgagagcctct 448
|||||||||||| || ||||| || ||||| || |||||||| |||| |||||||||
Sbjct: 29 acgccgccgtggccgggttcgtgacccactgcgggtggaactccatcctgnagagcctct 88
Query: 449 ggcatggcgtgccgatggtgccatggccgcttggcgccgagcagcactacaacgcgttca 508
|| ||||||||| || ||||||| ||||| | |||||||||||| | |||||||||||
Sbjct: 89 ggttcggcgtgccggtgctgccatgnccgctcgacgccgagcagcanttcaacgcgttca 148
Query: 509 cgctggtggccgacatgggcgtcgccgtggcgctgaacgtggaaaggaagaggaagaatt 568
| ||||| ||| || |||||||| ||||| |||| | |||| |||| | || | || |
Sbjct: 149 ccctggtcgcccacctgggcgtcnccgtgccgctcggcatggacaggaggcgggacaa-t 207
Query: 569 tcgtggaggcgaccgagctggagcgagcggt 599
||||||||||| | ||||||||||| |||||
Sbjct: 208 tcgtggaggcggcggagctggagcgcgcggt 238
>gb|CB683695.1|CB683695 OSJNEf12G22.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf12G22 5', mRNA sequence
Length = 781
Score = 63.9 bits (32), Expect = 2e-007
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 399 gggaggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgt 458
|||||| ||| | |||||||| || ||||||||||| |||||||||||| ||| || ||
Sbjct: 665 gggagggttcctgacgcactgcgggtggaactcggtgctcgagagcctcgtgcacggngt 724
Query: 459 gccgatggtgccatggccgcttggcgccgagcagc 493
||| |||||| | |||||||| |||||||||||
Sbjct: 725 gcccatggtggcctggccgctcttcgccgagcagc 759
Score = 46.1 bits (23), Expect = 0.039
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 205 gcgcacggcctggaccgcagcgggcatcgattcctgtgggtgctgcg 251
|||| ||| ||||| | ||||||||| ||||||||||||||| ||||
Sbjct: 453 gcgctcgggctggagctcagcgggcagcgattcctgtgggtggtgcg 499
>gb|CB637626.1|CB637626 OSJNEa04J02.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa04J02 3', mRNA sequence
Length = 572
Score = 61.9 bits (31), Expect = 7e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 399 gggaggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgt 458
|||||| ||| | |||||||| || ||||||||||| |||||||||||| ||| || ||
Sbjct: 570 gggagggttcctgacgcactgcgggtggaactcggtgctcgagagcctcgtgcacggggt 511
Query: 459 gccgatggtgccatggccgcttggcgccgagcagc 493
||| |||||| | |||||||| |||||||||||
Sbjct: 510 gcccatggtggcctggccgctcttcgccgagcagc 476
>gb|CB646078.1|CB646078 OSJNEb08E05.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb08E05 3', mRNA sequence
Length = 750
Score = 61.9 bits (31), Expect = 7e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 399 gggaggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgt 458
|||||| ||| | |||||||| || ||||||||||| |||||||||||| ||| || ||
Sbjct: 555 gggagggttcctgacgcactgcgggtggaactcggtgctcgagagcctcgtgcacggggt 496
Query: 459 gccgatggtgccatggccgcttggcgccgagcagc 493
||| |||||| | |||||||| |||||||||||
Sbjct: 495 gcccatggtggcctggccgctcttcgccgagcagc 461
Score = 44.1 bits (22), Expect = 0.15
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 222 cagcgggcatcgattcctgtgggtgctgcg 251
||||||||| ||||||||||||||| ||||
Sbjct: 750 cagcgggcagcgattcctgtgggtggtgcg 721
>gb|CB655822.1|CB655822 OSJNEc09J11.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc09J11 5', mRNA sequence
Length = 821
Score = 61.9 bits (31), Expect = 7e-007
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 399 gggaggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgt 458
|||||| ||| | |||||||| || ||||||||||| |||||||||||| ||| || ||
Sbjct: 702 gggagggttcctgacgcactgcgggtggaactcggtgctcgagagcctcgtgcacggggt 761
Query: 459 gccgatggtgccatggccgcttggcgccgagcagc 493
||| |||||| | |||||||| |||||||||||
Sbjct: 762 gcccatggtggcctggccgctcttcgccgagcagc 796
Score = 46.1 bits (23), Expect = 0.039
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 205 gcgcacggcctggaccgcagcgggcatcgattcctgtgggtgctgcg 251
|||| ||| ||||| | ||||||||| ||||||||||||||| ||||
Sbjct: 490 gcgctcgggctggagctcagcgggcagcgattcctgtgggtggtgcg 536
>gb|CB655823.1|CB655823 OSJNEc09J11.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc09J11 3', mRNA sequence
Length = 768
Score = 61.9 bits (31), Expect = 7e-007
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 399 gggaggcttcgtcacgcactgtggctggaactcggtcctcgagagcctctggcatggcgt 458
|||||| ||| | |||||||| || ||||||||||| |||||||||||| ||| || ||
Sbjct: 573 gggagggttcctgacgcactgcgggtggaactcggtgctcgagagcctcgtgcacggggt 514
Query: 459 gccgatggtgccatggccgcttggcgccgagcagc 493
||| |||||| | |||||||| |||||||||||
Sbjct: 513 gcccatggtggcctggccgctcttcgccgagcagc 479
Score = 44.1 bits (22), Expect = 0.15
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 222 cagcgggcatcgattcctgtgggtgctgcg 251
||||||||| ||||||||||||||| ||||
Sbjct: 768 cagcgggcagcgattcctgtgggtggtgcg 739
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,515,673
Number of Sequences: 438736
Number of extensions: 1515673
Number of successful extensions: 11545
Number of sequences better than 0.5: 172
Number of HSP's better than 0.5 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9829
Number of HSP's gapped (non-prelim): 1651
length of query: 1063
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1042
effective length of database: 2,791,206,460
effective search space: 2908437131320
effective search space used: 2908437131320
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)