BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2477970.2.1
(699 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AP003814.1| Oryza sativa (japonica cultivar-group) chro... 529 e-148
dbj|AP003700.3| Oryza sativa (japonica cultivar-group) geno... 529 e-148
dbj|AP005198.3| Oryza sativa (japonica cultivar-group) geno... 529 e-148
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 529 e-148
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 529 e-148
gb|AACV01016777.1| Oryza sativa (japonica cultivar-group) c... 521 e-145
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 521 e-145
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 521 e-145
ref|XM_479144.1| Oryza sativa (japonica cultivar-group), mRNA 511 e-142
gb|C98390.1|C98390 C98390 Rice callus Oryza sativa (japonic... 505 e-141
gb|AC135559.4| Oryza sativa chromosome 3 BAC OSJNBa0030J19 ... 502 e-139
gb|AACV01006879.1| Oryza sativa (japonica cultivar-group) c... 502 e-139
ref|XM_468609.1| Oryza sativa (japonica cultivar-group), mRNA 502 e-139
ref|NT_079921.2| Oryza sativa (japonica cultivar-group) 502 e-139
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 502 e-139
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 502 e-139
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 502 e-139
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 502 e-139
gb|CF290843.1|CF290843 14ROOT--01-A14.g1 Rice root plasmid ... 468 e-129
gb|AU057885.1|AU057885 AU057885 Oryza sativa mature leaf Ni... 462 e-127
gb|AU092539.1|AU092539 AU092539 Rice callus Oryza sativa (j... 456 e-126
gb|CB679234.1|CB679234 OSJNEf02H20.f OSJNEf Oryza sativa (j... 408 e-111
dbj|AK121069.1| Oryza sativa (japonica cultivar-group) cDNA... 408 e-111
dbj|AP003992.2| Oryza sativa (japonica cultivar-group) geno... 408 e-111
ref|NT_107176.1| Oryza sativa (japonica cultivar-group) 408 e-111
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 408 e-111
gb|AACV01003455.1| Oryza sativa (japonica cultivar-group) c... 404 e-110
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 404 e-110
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 404 e-110
gb|CO436043.1|CO436043 OsMR965 5MT resistant rice mutant cD... 394 e-107
gb|CB679235.1|CB679235 OSJNEf02H20.r OSJNEf Oryza sativa (j... 392 e-107
gb|C27507.1|C27507 C27507 Rice callus cDNA Oryza sativa (ja... 291 3e-076
gb|C27541.1|C27541 C27541 Rice callus cDNA Oryza sativa (ja... 274 6e-071
gb|AU085696.1|AU085696 AU085696 Rice callus Oryza sativa (j... 274 6e-071
gb|CV730110.1|CV730110 FLO--03-H19.b1 Rice flower lambda ph... 264 6e-068
gb|D16093.1|D16093 RICC3073A Rice callus Oryza sativa (japo... 262 2e-067
gb|AU160891.1|AU160891 AU160891 Rice callus Oryza sativa (j... 262 2e-067
gb|AU091401.1|AU091401 AU091401 Rice immature leaf includin... 244 5e-062
gb|CV722617.1|CV722617 root--01-A22.g1 Rice root lambda pha... 230 8e-058
gb|CX728879.1|CX728879 OSJNEf15A01.r OSJNEf Oryza sativa (j... 224 5e-056
gb|CB684973.1|CB684973 OSJNEf15A01.f OSJNEf Oryza sativa (j... 218 3e-054
gb|CB685679.1|CB685679 OSJNEf16E24.f OSJNEf Oryza sativa (j... 210 7e-052
gb|AU225500.1|AU225500 AU225500 Oryza sativa Koshihikari pi... 200 7e-049
gb|AU029992.1|AU029992 AU029992 Rice cDNA from immature lea... 182 2e-043
gb|C97181.1|C97181 C97181 Rice callus Oryza sativa (japonic... 174 4e-041
gb|C72433.1|C72433 C72433 Rice panicle at flowering stage O... 170 6e-040
gb|AU173389.1|AU173389 AU173389 Rice root Oryza sativa (jap... 170 6e-040
gb|AU088563.1|AU088563 AU088563 Rice callus Oryza sativa (j... 165 4e-038
gb|AU058360.1|AU058360 AU058360 Oryza sativa Nipponbare imm... 151 6e-034
gb|AU058021.1|AU058021 AU058021 Rice callus Oryza sativa (j... 147 9e-033
gb|AU058215.1|AU058215 AU058215 Oryza sativa Nipponbare imm... 139 2e-030
gb|AU197365.1|AU197365 AU197365 Rice immature leaf includin... 139 2e-030
gb|CV721372.1|CV721372 YBH--03-O04.b1 Rice before heading y... 131 6e-028
gb|AU092695.1|AU092695 AU092695 Rice callus Oryza sativa (j... 117 8e-024
gb|CV721429.1|CV721429 YBH--04-B15.b1 Rice before heading y... 90 2e-015
emb|AL831812.5|CNS08CAP Oryza sativa chromosome 12, . BAC O... 42 0.40
gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G1... 42 0.40
ref|NT_107149.1| Oryza sativa (japonica cultivar-group) 42 0.40
gb|AACV01006815.1| Oryza sativa (japonica cultivar-group) c... 42 0.40
gb|AACV01022178.1| Oryza sativa (japonica cultivar-group) c... 42 0.40
gb|AACV01024803.1| Oryza sativa (japonica cultivar-group) c... 42 0.40
ref|NM_197905.1| Oryza sativa (japonica cultivar-group) put... 42 0.40
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 42 0.40
ref|XM_470862.1| Oryza sativa (japonica cultivar-group), p... 42 0.40
ref|NT_079854.2| Oryza sativa (japonica cultivar-group) 42 0.40
gb|CH401279.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.40
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.40
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.40
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.40
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 42 0.40
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 42 0.40
gb|AC079853.2| Oryza sativa (japonica cultivar-group) chrom... 42 0.40
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.40
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 42 0.40
>dbj|AP003814.1| Oryza sativa (japonica cultivar-group) chromosome 7 clone OJ1154_D08,
*** SEQUENCING IN PROGRESS ***
Length = 108287
Score = 529 bits (267), Expect = e-148
Identities = 407/453 (89%), Gaps = 3/453 (0%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| ||| || | | ||||||||||||||||||||||||||||||||
Sbjct: 78556 cggcggcggcgatgacgacgagcctgaggaagaaccgcaagaagcgcggccacgtgtccg 78615
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||| |||||||||||||| |||||| |||||||||||||||| || || |||||||| |
Sbjct: 78616 ccggccacggccgcatcgggaagcaccggaagcacccgggaggccggggcaacgccggag 78675
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 78676 gcatgcaccaccaccgcatcctcttcgacaagtaccacccgggctacttcggcaaggtcg 78735
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
||||||| |||||||| | |||||||||||||||||||| ||| ||||| ||| | ||||
Sbjct: 78736 gcatgcgctacttccacaggctccgcaacaagttctactccccggcggtgaacgtggagc 78795
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgac---aaggccc 335
| |||||||||||||||||| |||| ||||||||||||||| ||||| | ||||| |
Sbjct: 78796 ggctctggtcgatggtgcccgccgagcaggcggcggaggccgccggcgccggcaaggcgc 78855
Query: 336 cgcagatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgc 395
| | | | ||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 78856 ccctgctggacgtgacgcagttcggctacttcaaggtgctcgggaagggtctgctgccgg 78915
Query: 396 caaagcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaagg 455
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78916 agaagcccatcgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaagg 78975
Query: 456 cagcaggcggcgccgtcgtgctcaccgcctagg 488
| || ||||||||||||||||||||||||||||
Sbjct: 78976 ccgccggcggcgccgtcgtgctcaccgcctagg 79008
>dbj|AP003700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1003_H02
Length = 124043
Score = 529 bits (267), Expect = e-148
Identities = 407/453 (89%), Gaps = 3/453 (0%)
Strand = Plus / Minus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| ||| || | | ||||||||||||||||||||||||||||||||
Sbjct: 104313 cggcggcggcgatgacgacgagcctgaggaagaaccgcaagaagcgcggccacgtgtccg 104254
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||| |||||||||||||| |||||| |||||||||||||||| || || |||||||| |
Sbjct: 104253 ccggccacggccgcatcgggaagcaccggaagcacccgggaggccggggcaacgccggag 104194
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 104193 gcatgcaccaccaccgcatcctcttcgacaagtaccacccgggctacttcggcaaggtcg 104134
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
||||||| |||||||| | |||||||||||||||||||| ||| ||||| ||| | ||||
Sbjct: 104133 gcatgcgctacttccacaggctccgcaacaagttctactccccggcggtgaacgtggagc 104074
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgac---aaggccc 335
| |||||||||||||||||| |||| ||||||||||||||| ||||| | ||||| |
Sbjct: 104073 ggctctggtcgatggtgcccgccgagcaggcggcggaggccgccggcgccggcaaggcgc 104014
Query: 336 cgcagatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgc 395
| | | | ||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 104013 ccctgctggacgtgacgcagttcggctacttcaaggtgctcgggaagggtctgctgccgg 103954
Query: 396 caaagcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaagg 455
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103953 agaagcccatcgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaagg 103894
Query: 456 cagcaggcggcgccgtcgtgctcaccgcctagg 488
| || ||||||||||||||||||||||||||||
Sbjct: 103893 ccgccggcggcgccgtcgtgctcaccgcctagg 103861
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
PAC clone:P0616D06
Length = 153800
Score = 529 bits (267), Expect = e-148
Identities = 407/453 (89%), Gaps = 3/453 (0%)
Strand = Plus / Minus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| ||| || | | ||||||||||||||||||||||||||||||||
Sbjct: 497 cggcggcggcgatgacgacgagcctgaggaagaaccgcaagaagcgcggccacgtgtccg 438
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||| |||||||||||||| |||||| |||||||||||||||| || || |||||||| |
Sbjct: 437 ccggccacggccgcatcgggaagcaccggaagcacccgggaggccggggcaacgccggag 378
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 377 gcatgcaccaccaccgcatcctcttcgacaagtaccacccgggctacttcggcaaggtcg 318
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
||||||| |||||||| | |||||||||||||||||||| ||| ||||| ||| | ||||
Sbjct: 317 gcatgcgctacttccacaggctccgcaacaagttctactccccggcggtgaacgtggagc 258
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgac---aaggccc 335
| |||||||||||||||||| |||| ||||||||||||||| ||||| | ||||| |
Sbjct: 257 ggctctggtcgatggtgcccgccgagcaggcggcggaggccgccggcgccggcaaggcgc 198
Query: 336 cgcagatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgc 395
| | | | ||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 197 ccctgctggacgtgacgcagttcggctacttcaaggtgctcgggaagggtctgctgccgg 138
Query: 396 caaagcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaagg 455
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 agaagcccatcgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaagg 78
Query: 456 cagcaggcggcgccgtcgtgctcaccgcctagg 488
| || ||||||||||||||||||||||||||||
Sbjct: 77 ccgccggcggcgccgtcgtgctcaccgcctagg 45
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
Length = 17249721
Score = 529 bits (267), Expect = e-148
Identities = 407/453 (89%), Gaps = 3/453 (0%)
Strand = Plus / Minus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| ||| || | | ||||||||||||||||||||||||||||||||
Sbjct: 12796831 cggcggcggcgatgacgacgagcctgaggaagaaccgcaagaagcgcggccacgtgtccg 12796772
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||| |||||||||||||| |||||| |||||||||||||||| || || |||||||| |
Sbjct: 12796771 ccggccacggccgcatcgggaagcaccggaagcacccgggaggccggggcaacgccggag 12796712
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 12796711 gcatgcaccaccaccgcatcctcttcgacaagtaccacccgggctacttcggcaaggtcg 12796652
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
||||||| |||||||| | |||||||||||||||||||| ||| ||||| ||| | ||||
Sbjct: 12796651 gcatgcgctacttccacaggctccgcaacaagttctactccccggcggtgaacgtggagc 12796592
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgac---aaggccc 335
| |||||||||||||||||| |||| ||||||||||||||| ||||| | ||||| |
Sbjct: 12796591 ggctctggtcgatggtgcccgccgagcaggcggcggaggccgccggcgccggcaaggcgc 12796532
Query: 336 cgcagatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgc 395
| | | | ||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 12796531 ccctgctggacgtgacgcagttcggctacttcaaggtgctcgggaagggtctgctgccgg 12796472
Query: 396 caaagcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaagg 455
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12796471 agaagcccatcgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaagg 12796412
Query: 456 cagcaggcggcgccgtcgtgctcaccgcctagg 488
| || ||||||||||||||||||||||||||||
Sbjct: 12796411 ccgccggcggcgccgtcgtgctcaccgcctagg 12796379
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 529 bits (267), Expect = e-148
Identities = 407/453 (89%), Gaps = 3/453 (0%)
Strand = Plus / Minus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| ||| || | | ||||||||||||||||||||||||||||||||
Sbjct: 25183826 cggcggcggcgatgacgacgagcctgaggaagaaccgcaagaagcgcggccacgtgtccg 25183767
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||| |||||||||||||| |||||| |||||||||||||||| || || |||||||| |
Sbjct: 25183766 ccggccacggccgcatcgggaagcaccggaagcacccgggaggccggggcaacgccggag 25183707
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 25183706 gcatgcaccaccaccgcatcctcttcgacaagtaccacccgggctacttcggcaaggtcg 25183647
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
||||||| |||||||| | |||||||||||||||||||| ||| ||||| ||| | ||||
Sbjct: 25183646 gcatgcgctacttccacaggctccgcaacaagttctactccccggcggtgaacgtggagc 25183587
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgac---aaggccc 335
| |||||||||||||||||| |||| ||||||||||||||| ||||| | ||||| |
Sbjct: 25183586 ggctctggtcgatggtgcccgccgagcaggcggcggaggccgccggcgccggcaaggcgc 25183527
Query: 336 cgcagatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgc 395
| | | | ||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 25183526 ccctgctggacgtgacgcagttcggctacttcaaggtgctcgggaagggtctgctgccgg 25183467
Query: 396 caaagcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaagg 455
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25183466 agaagcccatcgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaagg 25183407
Query: 456 cagcaggcggcgccgtcgtgctcaccgcctagg 488
| || ||||||||||||||||||||||||||||
Sbjct: 25183406 ccgccggcggcgccgtcgtgctcaccgcctagg 25183374
>gb|AACV01016777.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016777, whole
genome shotgun sequence
Length = 24609
Score = 521 bits (263), Expect = e-145
Identities = 406/453 (89%), Gaps = 3/453 (0%)
Strand = Plus / Minus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| ||| || | | ||||||||||||||||||||||||||||||||
Sbjct: 8060 cggcggcggcgatgacgacgagcctgaggaagaaccgcaagaagcgcggccacgtgtccg 8001
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||| |||||||||||||| |||||| |||||||||||||||| || || |||||||| |
Sbjct: 8000 ccggccacggccgcatcgggaagcaccggaagcacccgggaggccggggcaacgccggag 7941
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 7940 gcatgcaccaccaccgcatcctcttcgacaagtaccacccgggctacttcggcaaggtcg 7881
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
||||||| |||||||| | |||||||||||||||||||| ||| ||||| ||| | ||||
Sbjct: 7880 gcatgcgctacttccacaggctccgcaacaagttctactccccggcggtgaacgtggagc 7821
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgac---aaggccc 335
| |||||||||||||||||| |||| |||||||| |||||| ||||| | ||||| |
Sbjct: 7820 ggctctggtcgatggtgcccgccgagcaggcggcgaaggccgccggcgccggcaaggcgc 7761
Query: 336 cgcagatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgc 395
| | | | ||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 7760 ccctgctggacgtgacgcagttcggctacttcaaggtgctcgggaagggtctgctgccgg 7701
Query: 396 caaagcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaagg 455
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7700 agaagcccatcgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaagg 7641
Query: 456 cagcaggcggcgccgtcgtgctcaccgcctagg 488
| || ||||||||||||||||||||||||||||
Sbjct: 7640 ccgccggcggcgccgtcgtgctcaccgcctagg 7608
>gb|CH401226.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000063 genomic
scaffold, whole genome shotgun sequence
Length = 15204090
Score = 521 bits (263), Expect = e-145
Identities = 406/453 (89%), Gaps = 3/453 (0%)
Strand = Plus / Minus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| ||| || | | ||||||||||||||||||||||||||||||||
Sbjct: 10657595 cggcggcggcgatgacgacgagcctgaggaagaaccgcaagaagcgcggccacgtgtccg 10657536
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||| |||||||||||||| |||||| |||||||||||||||| || || |||||||| |
Sbjct: 10657535 ccggccacggccgcatcgggaagcaccggaagcacccgggaggccggggcaacgccggag 10657476
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 10657475 gcatgcaccaccaccgcatcctcttcgacaagtaccacccgggctacttcggcaaggtcg 10657416
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
||||||| |||||||| | |||||||||||||||||||| ||| ||||| ||| | ||||
Sbjct: 10657415 gcatgcgctacttccacaggctccgcaacaagttctactccccggcggtgaacgtggagc 10657356
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgac---aaggccc 335
| |||||||||||||||||| |||| |||||||| |||||| ||||| | ||||| |
Sbjct: 10657355 ggctctggtcgatggtgcccgccgagcaggcggcgaaggccgccggcgccggcaaggcgc 10657296
Query: 336 cgcagatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgc 395
| | | | ||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 10657295 ccctgctggacgtgacgcagttcggctacttcaaggtgctcgggaagggtctgctgccgg 10657236
Query: 396 caaagcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaagg 455
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10657235 agaagcccatcgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaagg 10657176
Query: 456 cagcaggcggcgccgtcgtgctcaccgcctagg 488
| || ||||||||||||||||||||||||||||
Sbjct: 10657175 ccgccggcggcgccgtcgtgctcaccgcctagg 10657143
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 521 bits (263), Expect = e-145
Identities = 406/453 (89%), Gaps = 3/453 (0%)
Strand = Plus / Minus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| ||| || | | ||||||||||||||||||||||||||||||||
Sbjct: 24057034 cggcggcggcgatgacgacgagcctgaggaagaaccgcaagaagcgcggccacgtgtccg 24056975
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||| |||||||||||||| |||||| |||||||||||||||| || || |||||||| |
Sbjct: 24056974 ccggccacggccgcatcgggaagcaccggaagcacccgggaggccggggcaacgccggag 24056915
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 24056914 gcatgcaccaccaccgcatcctcttcgacaagtaccacccgggctacttcggcaaggtcg 24056855
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
||||||| |||||||| | |||||||||||||||||||| ||| ||||| ||| | ||||
Sbjct: 24056854 gcatgcgctacttccacaggctccgcaacaagttctactccccggcggtgaacgtggagc 24056795
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgac---aaggccc 335
| |||||||||||||||||| |||| |||||||| |||||| ||||| | ||||| |
Sbjct: 24056794 ggctctggtcgatggtgcccgccgagcaggcggcgaaggccgccggcgccggcaaggcgc 24056735
Query: 336 cgcagatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgc 395
| | | | ||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 24056734 ccctgctggacgtgacgcagttcggctacttcaaggtgctcgggaagggtctgctgccgg 24056675
Query: 396 caaagcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaagg 455
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24056674 agaagcccatcgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaagg 24056615
Query: 456 cagcaggcggcgccgtcgtgctcaccgcctagg 488
| || ||||||||||||||||||||||||||||
Sbjct: 24056614 ccgccggcggcgccgtcgtgctcaccgcctagg 24056582
>ref|XM_479144.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 441
Score = 511 bits (258), Expect = e-142
Identities = 383/424 (90%), Gaps = 3/424 (0%)
Strand = Plus / Plus
Query: 67 gaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaagcacag 126
|||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |
Sbjct: 18 gaagaaccgcaagaagcgcggccacgtgtccgccggccacggccgcatcgggaagcaccg 77
Query: 127 gaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctcttcga 186
||||||||||||||| || || |||||||| ||||||||||||||||| |||||||||||
Sbjct: 78 gaagcacccgggaggccggggcaacgccggaggcatgcaccaccaccgcatcctcttcga 137
Query: 187 caagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctccgcaa 246
||||||||| |||||||||||||||||||| |||||||| |||||||| | |||||||||
Sbjct: 138 caagtaccacccgggctacttcggcaaggtcggcatgcgctacttccacaggctccgcaa 197
Query: 247 caagttctactgccccgcggtcaacatcgagcgcctctggtcgatggtgcccaccgacaa 306
||||||||||| ||| ||||| ||| | ||||| |||||||||||||||||| |||| |
Sbjct: 198 caagttctactccccggcggtgaacgtggagcggctctggtcgatggtgcccgccgagca 257
Query: 307 ggcggcggaggccggcggcgac---aaggccccgcagatcgacgtcacgcagttcggcta 363
|||||||||||||| ||||| | ||||| || | | | ||||| ||||||||||||||
Sbjct: 258 ggcggcggaggccgccggcgccggcaaggcgcccctgctggacgtgacgcagttcggcta 317
Query: 364 cttcaaggtgctcgggaagggggtgctgccgccaaagcccattgtcgtcaaggccaagct 423
||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||
Sbjct: 318 cttcaaggtgctcgggaagggtctgctgccggagaagcccatcgtcgtcaaggccaagct 377
Query: 424 catctccaaggtcgccgagaagaagatcaaggcagcaggcggcgccgtcgtgctcaccgc 483
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 378 catctccaaggtcgccgagaagaagatcaaggccgccggcggcgccgtcgtgctcaccgc 437
Query: 484 ctag 487
||||
Sbjct: 438 ctag 441
>gb|C98390.1|C98390 C98390 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C3073_6Z, mRNA sequence
Length = 695
Score = 505 bits (255), Expect = e-141
Identities = 406/453 (89%), Gaps = 5/453 (1%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| ||| |||| | ||||||||||||||||||||||||||||||||
Sbjct: 19 cggcggcggcgatgacgacgagcttgaggaagaaccgcaagaagcgcggccacgtgtccg 78
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||| |||||||||||||| |||||| |||||||||||||||| || || |||||||| |
Sbjct: 79 ccggccacggccgcatcgggaagcaccggaagcacccgggaggccggggcaacgccggag 138
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 139 gcatgcaccaccaccgcatcctcttcgacaagtaccacccgggctacttcggcaaggtcg 198
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
||||||| |||||||| | | |||||||||||||||||| ||| ||||| ||| | ||||
Sbjct: 199 gcatgcgctacttccacagg-tccgcaacaagttctactccccggcggtgaacgtggagc 257
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgac---aaggccc 335
| |||||||||||||||||| |||| ||||||||||||||| ||||| | ||||| |
Sbjct: 258 ggctctggtcgatggtgcccgccgagcaggcggcggaggccgccggcgccggcaaggcgc 317
Query: 336 cgcagatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgc 395
| | | | ||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 318 ccctgctggacgtgacgcagttcggctacttcaaggtgctcgggaagggtctgctgccgg 377
Query: 396 caaagcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaagg 455
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 agaagcccatcgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaagg 437
Query: 456 cagcaggcggcgccgtcgtgctcaccgcctagg 488
| | ||||||||||||||||||||||||||||
Sbjct: 438 c-cccggcggcgccgtcgtgctcaccgcctagg 469
>gb|AC135559.4| Oryza sativa chromosome 3 BAC OSJNBa0030J19 genomic sequence, complete
sequence
Length = 133843
Score = 502 bits (253), Expect = e-139
Identities = 396/443 (89%), Gaps = 3/443 (0%)
Strand = Plus / Minus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 54543 atgacaacgcgcttcaagaagaaccggaagaagcgcggccacgtgtcggccgggcacggg 54484
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|||||||| |||||| | |||||||| ||||| |||||||||||||| || |||||||||
Sbjct: 54483 cgcatcgggaagcaccgcaagcaccccggaggccgcggtaacgccggagggatgcaccac 54424
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
||||| ||||| |||||||||||||| |||||||||||||||||||| |||||||| |||
Sbjct: 54423 caccggatcctgttcgacaagtaccacccgggctacttcggcaaggtcggcatgcgctac 54364
Query: 230 ttccataagctccgcaacaagttctactgccccgcggtcaacatcgagcgcctctggtcg 289
||||| |||||| |||||| |||| |||||||||| |||||| ||||||||||||||||
Sbjct: 54363 ttccacaagctcagcaacaggttccactgccccgccgtcaacgtcgagcgcctctggtcc 54304
Query: 290 atggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgcagatcgacgtc 349
|||||||||||||||||||| || |||||||||| || ||||||||| |||||||||
Sbjct: 54303 atggtgcccaccgacaaggccgccgaggccggcgccggcaaggcccccgtcatcgacgtc 54244
Query: 350 acgcagttcggctacttcaaggtgctcgggaagggggtgct---gccgccaaagcccatt 406
|| |||||||||||| |||||||||||| |||||| |||| |||| | ||||||
Sbjct: 54243 acccagttcggctacaccaaggtgctcggcaaggggatgcttcccccgcagaggcccatc 54184
Query: 407 gtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggc 466
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 54183 gtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggc 54124
Query: 467 gccgtcgtgctcaccgcctaggt 489
|||||| | ||||||||||||||
Sbjct: 54123 gccgtcctcctcaccgcctaggt 54101
>gb|AACV01006879.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006879, whole
genome shotgun sequence
Length = 26150
Score = 502 bits (253), Expect = e-139
Identities = 396/443 (89%), Gaps = 3/443 (0%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 19171 atgacaacgcgcttcaagaagaaccggaagaagcgcggccacgtgtcggccgggcacggg 19230
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|||||||| |||||| | |||||||| ||||| |||||||||||||| || |||||||||
Sbjct: 19231 cgcatcgggaagcaccgcaagcaccccggaggccgcggtaacgccggagggatgcaccac 19290
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
||||| ||||| |||||||||||||| |||||||||||||||||||| |||||||| |||
Sbjct: 19291 caccggatcctgttcgacaagtaccacccgggctacttcggcaaggtcggcatgcgctac 19350
Query: 230 ttccataagctccgcaacaagttctactgccccgcggtcaacatcgagcgcctctggtcg 289
||||| |||||| |||||| |||| |||||||||| |||||| ||||||||||||||||
Sbjct: 19351 ttccacaagctcagcaacaggttccactgccccgccgtcaacgtcgagcgcctctggtcc 19410
Query: 290 atggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgcagatcgacgtc 349
|||||||||||||||||||| || |||||||||| || ||||||||| |||||||||
Sbjct: 19411 atggtgcccaccgacaaggccgccgaggccggcgccggcaaggcccccgtcatcgacgtc 19470
Query: 350 acgcagttcggctacttcaaggtgctcgggaagggggtgct---gccgccaaagcccatt 406
|| |||||||||||| |||||||||||| |||||| |||| |||| | ||||||
Sbjct: 19471 acccagttcggctacaccaaggtgctcggcaaggggatgcttcccccgcagaggcccatc 19530
Query: 407 gtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggc 466
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 19531 gtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggc 19590
Query: 467 gccgtcgtgctcaccgcctaggt 489
|||||| | ||||||||||||||
Sbjct: 19591 gccgtcctcctcaccgcctaggt 19613
>ref|XM_468609.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 694
Score = 502 bits (253), Expect = e-139
Identities = 396/443 (89%), Gaps = 3/443 (0%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 31 atgacaacgcgcttcaagaagaaccggaagaagcgcggccacgtgtcggccgggcacggg 90
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|||||||| |||||| | |||||||| ||||| |||||||||||||| || |||||||||
Sbjct: 91 cgcatcgggaagcaccgcaagcaccccggaggccgcggtaacgccggagggatgcaccac 150
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
||||| ||||| |||||||||||||| |||||||||||||||||||| |||||||| |||
Sbjct: 151 caccggatcctgttcgacaagtaccacccgggctacttcggcaaggtcggcatgcgctac 210
Query: 230 ttccataagctccgcaacaagttctactgccccgcggtcaacatcgagcgcctctggtcg 289
||||| |||||| |||||| |||| |||||||||| |||||| ||||||||||||||||
Sbjct: 211 ttccacaagctcagcaacaggttccactgccccgccgtcaacgtcgagcgcctctggtcc 270
Query: 290 atggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgcagatcgacgtc 349
|||||||||||||||||||| || |||||||||| || ||||||||| |||||||||
Sbjct: 271 atggtgcccaccgacaaggccgccgaggccggcgccggcaaggcccccgtcatcgacgtc 330
Query: 350 acgcagttcggctacttcaaggtgctcgggaagggggtgct---gccgccaaagcccatt 406
|| |||||||||||| |||||||||||| |||||| |||| |||| | ||||||
Sbjct: 331 acccagttcggctacaccaaggtgctcggcaaggggatgcttcccccgcagaggcccatc 390
Query: 407 gtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggc 466
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 391 gtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggc 450
Query: 467 gccgtcgtgctcaccgcctaggt 489
|||||| | ||||||||||||||
Sbjct: 451 gccgtcctcctcaccgcctaggt 473
>ref|NT_079921.2| Oryza sativa (japonica cultivar-group)
Length = 1595909
Score = 502 bits (253), Expect = e-139
Identities = 396/443 (89%), Gaps = 3/443 (0%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 79301 atgacaacgcgcttcaagaagaaccggaagaagcgcggccacgtgtcggccgggcacggg 79360
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|||||||| |||||| | |||||||| ||||| |||||||||||||| || |||||||||
Sbjct: 79361 cgcatcgggaagcaccgcaagcaccccggaggccgcggtaacgccggagggatgcaccac 79420
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
||||| ||||| |||||||||||||| |||||||||||||||||||| |||||||| |||
Sbjct: 79421 caccggatcctgttcgacaagtaccacccgggctacttcggcaaggtcggcatgcgctac 79480
Query: 230 ttccataagctccgcaacaagttctactgccccgcggtcaacatcgagcgcctctggtcg 289
||||| |||||| |||||| |||| |||||||||| |||||| ||||||||||||||||
Sbjct: 79481 ttccacaagctcagcaacaggttccactgccccgccgtcaacgtcgagcgcctctggtcc 79540
Query: 290 atggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgcagatcgacgtc 349
|||||||||||||||||||| || |||||||||| || ||||||||| |||||||||
Sbjct: 79541 atggtgcccaccgacaaggccgccgaggccggcgccggcaaggcccccgtcatcgacgtc 79600
Query: 350 acgcagttcggctacttcaaggtgctcgggaagggggtgct---gccgccaaagcccatt 406
|| |||||||||||| |||||||||||| |||||| |||| |||| | ||||||
Sbjct: 79601 acccagttcggctacaccaaggtgctcggcaaggggatgcttcccccgcagaggcccatc 79660
Query: 407 gtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggc 466
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 79661 gtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggc 79720
Query: 467 gccgtcgtgctcaccgcctaggt 489
|||||| | ||||||||||||||
Sbjct: 79721 gccgtcctcctcaccgcctaggt 79743
>gb|CH401174.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000011 genomic
scaffold, whole genome shotgun sequence
Length = 12704415
Score = 502 bits (253), Expect = e-139
Identities = 396/443 (89%), Gaps = 3/443 (0%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 3268934 atgacaacgcgcttcaagaagaaccggaagaagcgcggccacgtgtcggccgggcacggg 3268993
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|||||||| |||||| | |||||||| ||||| |||||||||||||| || |||||||||
Sbjct: 3268994 cgcatcgggaagcaccgcaagcaccccggaggccgcggtaacgccggagggatgcaccac 3269053
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
||||| ||||| |||||||||||||| |||||||||||||||||||| |||||||| |||
Sbjct: 3269054 caccggatcctgttcgacaagtaccacccgggctacttcggcaaggtcggcatgcgctac 3269113
Query: 230 ttccataagctccgcaacaagttctactgccccgcggtcaacatcgagcgcctctggtcg 289
||||| |||||| |||||| |||| |||||||||| |||||| ||||||||||||||||
Sbjct: 3269114 ttccacaagctcagcaacaggttccactgccccgccgtcaacgtcgagcgcctctggtcc 3269173
Query: 290 atggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgcagatcgacgtc 349
|||||||||||||||||||| || |||||||||| || ||||||||| |||||||||
Sbjct: 3269174 atggtgcccaccgacaaggccgccgaggccggcgccggcaaggcccccgtcatcgacgtc 3269233
Query: 350 acgcagttcggctacttcaaggtgctcgggaagggggtgct---gccgccaaagcccatt 406
|| |||||||||||| |||||||||||| |||||| |||| |||| | ||||||
Sbjct: 3269234 acccagttcggctacaccaaggtgctcggcaaggggatgcttcccccgcagaggcccatc 3269293
Query: 407 gtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggc 466
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 3269294 gtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggc 3269353
Query: 467 gccgtcgtgctcaccgcctaggt 489
|||||| | ||||||||||||||
Sbjct: 3269354 gccgtcctcctcaccgcctaggt 3269376
Score = 42.1 bits (21), Expect = 0.40
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 306 aggcggcggaggccggcggcg 326
|||||||||||||||||||||
Sbjct: 2419250 aggcggcggaggccggcggcg 2419230
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 502 bits (253), Expect = e-139
Identities = 396/443 (89%), Gaps = 3/443 (0%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 17319641 atgacaacgcgcttcaagaagaaccggaagaagcgcggccacgtgtcggccgggcacggg 17319700
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|||||||| |||||| | |||||||| ||||| |||||||||||||| || |||||||||
Sbjct: 17319701 cgcatcgggaagcaccgcaagcaccccggaggccgcggtaacgccggagggatgcaccac 17319760
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
||||| ||||| |||||||||||||| |||||||||||||||||||| |||||||| |||
Sbjct: 17319761 caccggatcctgttcgacaagtaccacccgggctacttcggcaaggtcggcatgcgctac 17319820
Query: 230 ttccataagctccgcaacaagttctactgccccgcggtcaacatcgagcgcctctggtcg 289
||||| |||||| |||||| |||| |||||||||| |||||| ||||||||||||||||
Sbjct: 17319821 ttccacaagctcagcaacaggttccactgccccgccgtcaacgtcgagcgcctctggtcc 17319880
Query: 290 atggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgcagatcgacgtc 349
|||||||||||||||||||| || |||||||||| || ||||||||| |||||||||
Sbjct: 17319881 atggtgcccaccgacaaggccgccgaggccggcgccggcaaggcccccgtcatcgacgtc 17319940
Query: 350 acgcagttcggctacttcaaggtgctcgggaagggggtgct---gccgccaaagcccatt 406
|| |||||||||||| |||||||||||| |||||| |||| |||| | ||||||
Sbjct: 17319941 acccagttcggctacaccaaggtgctcggcaaggggatgcttcccccgcagaggcccatc 17320000
Query: 407 gtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggc 466
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 17320001 gtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggc 17320060
Query: 467 gccgtcgtgctcaccgcctaggt 489
|||||| | ||||||||||||||
Sbjct: 17320061 gccgtcctcctcaccgcctaggt 17320083
Score = 42.1 bits (21), Expect = 0.40
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 306 aggcggcggaggccggcggcg 326
|||||||||||||||||||||
Sbjct: 16469957 aggcggcggaggccggcggcg 16469937
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 502 bits (253), Expect = e-139
Identities = 396/443 (89%), Gaps = 3/443 (0%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 16593133 atgacaacgcgcttcaagaagaaccggaagaagcgcggccacgtgtcggccgggcacggg 16593192
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|||||||| |||||| | |||||||| ||||| |||||||||||||| || |||||||||
Sbjct: 16593193 cgcatcgggaagcaccgcaagcaccccggaggccgcggtaacgccggagggatgcaccac 16593252
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
||||| ||||| |||||||||||||| |||||||||||||||||||| |||||||| |||
Sbjct: 16593253 caccggatcctgttcgacaagtaccacccgggctacttcggcaaggtcggcatgcgctac 16593312
Query: 230 ttccataagctccgcaacaagttctactgccccgcggtcaacatcgagcgcctctggtcg 289
||||| |||||| |||||| |||| |||||||||| |||||| ||||||||||||||||
Sbjct: 16593313 ttccacaagctcagcaacaggttccactgccccgccgtcaacgtcgagcgcctctggtcc 16593372
Query: 290 atggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgcagatcgacgtc 349
|||||||||||||||||||| || |||||||||| || ||||||||| |||||||||
Sbjct: 16593373 atggtgcccaccgacaaggccgccgaggccggcgccggcaaggcccccgtcatcgacgtc 16593432
Query: 350 acgcagttcggctacttcaaggtgctcgggaagggggtgct---gccgccaaagcccatt 406
|| |||||||||||| |||||||||||| |||||| |||| |||| | ||||||
Sbjct: 16593433 acccagttcggctacaccaaggtgctcggcaaggggatgcttcccccgcagaggcccatc 16593492
Query: 407 gtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggc 466
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 16593493 gtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggc 16593552
Query: 467 gccgtcgtgctcaccgcctaggt 489
|||||| | ||||||||||||||
Sbjct: 16593553 gccgtcctcctcaccgcctaggt 16593575
Score = 42.1 bits (21), Expect = 0.40
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 306 aggcggcggaggccggcggcg 326
|||||||||||||||||||||
Sbjct: 15832165 aggcggcggaggccggcggcg 15832145
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 502 bits (253), Expect = e-139
Identities = 396/443 (89%), Gaps = 3/443 (0%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 16599500 atgacaacgcgcttcaagaagaaccggaagaagcgcggccacgtgtcggccgggcacggg 16599559
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|||||||| |||||| | |||||||| ||||| |||||||||||||| || |||||||||
Sbjct: 16599560 cgcatcgggaagcaccgcaagcaccccggaggccgcggtaacgccggagggatgcaccac 16599619
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
||||| ||||| |||||||||||||| |||||||||||||||||||| |||||||| |||
Sbjct: 16599620 caccggatcctgttcgacaagtaccacccgggctacttcggcaaggtcggcatgcgctac 16599679
Query: 230 ttccataagctccgcaacaagttctactgccccgcggtcaacatcgagcgcctctggtcg 289
||||| |||||| |||||| |||| |||||||||| |||||| ||||||||||||||||
Sbjct: 16599680 ttccacaagctcagcaacaggttccactgccccgccgtcaacgtcgagcgcctctggtcc 16599739
Query: 290 atggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgcagatcgacgtc 349
|||||||||||||||||||| || |||||||||| || ||||||||| |||||||||
Sbjct: 16599740 atggtgcccaccgacaaggccgccgaggccggcgccggcaaggcccccgtcatcgacgtc 16599799
Query: 350 acgcagttcggctacttcaaggtgctcgggaagggggtgct---gccgccaaagcccatt 406
|| |||||||||||| |||||||||||| |||||| |||| |||| | ||||||
Sbjct: 16599800 acccagttcggctacaccaaggtgctcggcaaggggatgcttcccccgcagaggcccatc 16599859
Query: 407 gtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggc 466
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 16599860 gtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggc 16599919
Query: 467 gccgtcgtgctcaccgcctaggt 489
|||||| | ||||||||||||||
Sbjct: 16599920 gccgtcctcctcaccgcctaggt 16599942
Score = 42.1 bits (21), Expect = 0.40
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 306 aggcggcggaggccggcggcg 326
|||||||||||||||||||||
Sbjct: 15837631 aggcggcggaggccggcggcg 15837611
>gb|CF290843.1|CF290843 14ROOT--01-A14.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-A14, mRNA sequence
Length = 457
Score = 468 bits (236), Expect = e-129
Identities = 373/418 (89%), Gaps = 3/418 (0%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
|||||||||||||||| ||| || | | ||||||||||||||||||||||||||||||||
Sbjct: 40 cggcggcggcgatgacgacgagcctgaggaagaaccgcaagaagcgcggccacgtgtccg 99
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||| |||||||||||||| |||||| |||||||||||||||| || || |||||||| |
Sbjct: 100 ccggccacggccgcatcgggaagcaccggaagcacccgggaggccggggcaacgccggag 159
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 160 gcatgcaccaccaccgcatcctcttcgacaagtaccacccgggctacttcggcaaggtcg 219
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
||||||| |||||||| | |||||||||||||||||||| ||| ||||| ||| | ||||
Sbjct: 220 gcatgcgctacttccacaggctccgcaacaagttctactccccggcggtgaacgtggagc 279
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgac---aaggccc 335
| |||||||||||||| ||| |||| ||||||||||||||| ||||| | ||||| |
Sbjct: 280 ggctctggtcgatggttcccgccgagcaggcggcggaggccgccggcgccggcaaggcgc 339
Query: 336 cgcagatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgc 395
| | | | ||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 340 ccctgctggacgtgacgcagttcggctacttcaaggtgctcgggaagggtctgctgccgg 399
Query: 396 caaagcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaa 453
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 agaagcccatcgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaa 457
>gb|AU057885.1|AU057885 AU057885 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S21874_1A, mRNA sequence
Length = 650
Score = 462 bits (233), Expect = e-127
Identities = 398/447 (89%), Gaps = 6/447 (1%)
Strand = Plus / Plus
Query: 45 cggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggc 104
|||||||||| ||| || | | |||||||||||||||||||||||||||||||||||| |
Sbjct: 24 cggcgatgacgacgagcctgaggaagaaccgcaagaagcgcggccacgtgtccgccggcc 83
Query: 105 acggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatg- 163
||||||||||||| |||||| |||||||||||||||| || || |||||||| | |||
Sbjct: 84 acggccgcatcgggaagcaccggaagcacccgggaggccggggcaacgccggagn-atga 142
Query: 164 caccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatg 223
||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 143 caccaccaccgcatcctcttcgacaagtaccacccgggctacttcggcaaggtcggcatg 202
Query: 224 cgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagcgcctc 283
|| |||||||| | |||||||||||||||||||| ||| ||||| ||| | ||||| |||
Sbjct: 203 cgctacttccacaggctccgcaacaagttctactccccggcggtgaacgtggagcggctc 262
Query: 284 tggtcgatggtgcccaccgacaaggcggcggaggccg--gcggcgacaaggccccgcaga 341
||||||||||||||| |||| ||||| ||||||||| ||| || |||||| || | |
Sbjct: 263 tggtcgatggtgcccgccgagcaggcg-cggaggccgcggcgccggcaaggcgcc-ctgc 320
Query: 342 tcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaaagc 401
| ||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 321 tggacgtgacgcagttcggctacttcaaggtgctcgggaagggtctgctgccggagaagc 380
Query: 402 ccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcagcag 461
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 381 ccatcgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggccgccg 440
Query: 462 gcggcgccgtcgtgctcaccgcctagg 488
|||||||||||||||||||||||||||
Sbjct: 441 gcggcgccgtcgtgctcaccgcctagg 467
>gb|AU092539.1|AU092539 AU092539 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52076, mRNA sequence
Length = 663
Score = 456 bits (230), Expect = e-126
Identities = 394/444 (88%), Gaps = 6/444 (1%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 9 atgacaacgcgcttcaagaagaaccggaagaagcgcggccacgtgtcggccgggcacggg 68
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|||||||| |||||| | |||||||| ||||| |||||||||||||| || |||||||||
Sbjct: 69 cgcatcgggaagcaccgcaagcaccccggaggccgcggtaacgccggagggatgcaccac 128
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
||||| ||||| |||||||||||||| |||||||| ||||||||||| |||||||| |||
Sbjct: 129 caccggatcctgttcgacaagtaccacccgggcta-ttcggcaaggtcggcatgcgctac 187
Query: 230 ttccataagctccgcaacaagttctactgccccgcggtcaacatcgagcgcctctggtcg 289
||||| |||||| ||||| ||||| | |||||||| |||||| ||||||||||||||||
Sbjct: 188 ttccacaagctcagcaac-agttccattgccccgccgtcaacgtcgagcgcctctggtcc 246
Query: 290 atggtg-cccaccgacaaggcggcggaggccggcggcgacaaggccccgcagatcgacgt 348
|||||| |||||||||||||| || |||||||||| || ||||||||| ||||||||
Sbjct: 247 atggtgccccaccgacaaggccgccgaggccggcgccggcaaggcccccgtcatcgacgt 306
Query: 349 cacgcagttcggctacttcaaggtgctcgggaagggggtgct---gccgccaaagcccat 405
||| |||||||||||| |||||||||||| |||||| |||| |||| | ||||||
Sbjct: 307 cacccagttcggctacaccaaggtgctcggcaaggggatgcttcccccgcagaggcccat 366
Query: 406 tgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcgg 465
|||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 367 cgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggccgccggcgg 426
Query: 466 cgccgtcgtgctcaccgcctaggt 489
||||||| | ||||||||||||||
Sbjct: 427 cgccgtcctcctcaccgcctaggt 450
>gb|CB679234.1|CB679234 OSJNEf02H20.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf02H20 5', mRNA sequence
Length = 638
Score = 408 bits (206), Expect = e-111
Identities = 375/431 (87%), Gaps = 9/431 (2%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||| |||
Sbjct: 38 ttcaagaagaaccggaagaagcgcgggcacgtgtcggccgggcacgggcggatcgggaag 97
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| |||||||||||||||| ||||| |||||||| || |||||||||||||| |||||
Sbjct: 98 caccggaagcacccgggagggcgcgggaacgccggcgggatgcaccaccaccgcatcctg 157
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
|||||||||||||| |||||||||||||||||||| || ||||| |||||||| | ||||
Sbjct: 158 ttcgacaagtaccacccgggctacttcggcaaggtcgggatgcgctacttccacaggctc 217
Query: 242 cgcaacaagttctactgccccgcggtcaacatcgagcgcctctggtcgatggtgcccacc 301
|||||| |||| |||||||||| |||||| |||||||||||||||| ||||||||| ||
Sbjct: 218 agcaacaggttccactgccccgccgtcaacgtcgagcgcctctggtccatggtgcccgcc 277
Query: 302 gacaaggcggcggaggccggcggcgacaaggccccgcagatcgacgtcacgcagttcggc 361
|| ||| | ||||||| || ||||||||| |||||||||||||||||||||
Sbjct: 278 ga------ggccggcgccggcgccggcaaggcccccgtcatcgacgtcacgcagttcggc 331
Query: 362 tacttcaaggtgctcgggaagggggtgctgccgcca---aagcccattgtcgtcaaggcc 418
||| |||||||||||| |||||| |||| || ||| | |||||| ||||||||||||
Sbjct: 332 tacaccaaggtgctcggcaaggggatgctccccccagagaggcccatcgtcgtcaaggcc 391
Query: 419 aagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggcgccgtcgtgctc 478
|||||||||||||||||||||||||||||||||||||| || |||||||||||| | |||
Sbjct: 392 aagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggcgccgtcctcctc 451
Query: 479 accgcctaggt 489
|||||||||||
Sbjct: 452 accgcctaggt 462
>dbj|AK121069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061G23, full
insert sequence
Length = 727
Score = 408 bits (206), Expect = e-111
Identities = 375/431 (87%), Gaps = 9/431 (2%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||| |||
Sbjct: 68 ttcaagaagaaccggaagaagcgcgggcacgtgtcggccgggcacgggcggatcgggaag 127
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| |||||||||||||||| ||||| |||||||| || |||||||||||||| |||||
Sbjct: 128 caccggaagcacccgggagggcgcgggaacgccggcgggatgcaccaccaccgcatcctg 187
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
|||||||||||||| |||||||||||||||||||| || ||||| |||||||| | ||||
Sbjct: 188 ttcgacaagtaccacccgggctacttcggcaaggtcgggatgcgctacttccacaggctc 247
Query: 242 cgcaacaagttctactgccccgcggtcaacatcgagcgcctctggtcgatggtgcccacc 301
|||||| |||| |||||||||| |||||| |||||||||||||||| ||||||||| ||
Sbjct: 248 agcaacaggttccactgccccgccgtcaacgtcgagcgcctctggtccatggtgcccgcc 307
Query: 302 gacaaggcggcggaggccggcggcgacaaggccccgcagatcgacgtcacgcagttcggc 361
|| ||| | ||||||| || ||||||||| |||||||||||||||||||||
Sbjct: 308 ga------ggccggcgccggcgccggcaaggcccccgtcatcgacgtcacgcagttcggc 361
Query: 362 tacttcaaggtgctcgggaagggggtgctgccgcca---aagcccattgtcgtcaaggcc 418
||| |||||||||||| |||||| |||| || ||| | |||||| ||||||||||||
Sbjct: 362 tacaccaaggtgctcggcaaggggatgctccccccagagaggcccatcgtcgtcaaggcc 421
Query: 419 aagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggcgccgtcgtgctc 478
|||||||||||||||||||||||||||||||||||||| || |||||||||||| | |||
Sbjct: 422 aagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggcgccgtcctcctc 481
Query: 479 accgcctaggt 489
|||||||||||
Sbjct: 482 accgcctaggt 492
>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1077_E05
Length = 116305
Score = 408 bits (206), Expect = e-111
Identities = 375/431 (87%), Gaps = 9/431 (2%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||| |||
Sbjct: 44980 ttcaagaagaaccggaagaagcgcgggcacgtgtcggccgggcacgggcggatcgggaag 45039
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| |||||||||||||||| ||||| |||||||| || |||||||||||||| |||||
Sbjct: 45040 caccggaagcacccgggagggcgcgggaacgccggcgggatgcaccaccaccgcatcctg 45099
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
|||||||||||||| |||||||||||||||||||| || ||||| |||||||| | ||||
Sbjct: 45100 ttcgacaagtaccacccgggctacttcggcaaggtcgggatgcgctacttccacaggctc 45159
Query: 242 cgcaacaagttctactgccccgcggtcaacatcgagcgcctctggtcgatggtgcccacc 301
|||||| |||| |||||||||| |||||| |||||||||||||||| ||||||||| ||
Sbjct: 45160 agcaacaggttccactgccccgccgtcaacgtcgagcgcctctggtccatggtgcccgcc 45219
Query: 302 gacaaggcggcggaggccggcggcgacaaggccccgcagatcgacgtcacgcagttcggc 361
|| ||| | ||||||| || ||||||||| |||||||||||||||||||||
Sbjct: 45220 ga------ggccggcgccggcgccggcaaggcccccgtcatcgacgtcacgcagttcggc 45273
Query: 362 tacttcaaggtgctcgggaagggggtgctgccgcca---aagcccattgtcgtcaaggcc 418
||| |||||||||||| |||||| |||| || ||| | |||||| ||||||||||||
Sbjct: 45274 tacaccaaggtgctcggcaaggggatgctccccccagagaggcccatcgtcgtcaaggcc 45333
Query: 419 aagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggcgccgtcgtgctc 478
|||||||||||||||||||||||||||||||||||||| || |||||||||||| | |||
Sbjct: 45334 aagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggcgccgtcctcctc 45393
Query: 479 accgcctaggt 489
|||||||||||
Sbjct: 45394 accgcctaggt 45404
>ref|NT_107176.1| Oryza sativa (japonica cultivar-group)
Length = 1593847
Score = 408 bits (206), Expect = e-111
Identities = 375/431 (87%), Gaps = 9/431 (2%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||| |||
Sbjct: 1100814 ttcaagaagaaccggaagaagcgcgggcacgtgtcggccgggcacgggcggatcgggaag 1100873
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| |||||||||||||||| ||||| |||||||| || |||||||||||||| |||||
Sbjct: 1100874 caccggaagcacccgggagggcgcgggaacgccggcgggatgcaccaccaccgcatcctg 1100933
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
|||||||||||||| |||||||||||||||||||| || ||||| |||||||| | ||||
Sbjct: 1100934 ttcgacaagtaccacccgggctacttcggcaaggtcgggatgcgctacttccacaggctc 1100993
Query: 242 cgcaacaagttctactgccccgcggtcaacatcgagcgcctctggtcgatggtgcccacc 301
|||||| |||| |||||||||| |||||| |||||||||||||||| ||||||||| ||
Sbjct: 1100994 agcaacaggttccactgccccgccgtcaacgtcgagcgcctctggtccatggtgcccgcc 1101053
Query: 302 gacaaggcggcggaggccggcggcgacaaggccccgcagatcgacgtcacgcagttcggc 361
|| ||| | ||||||| || ||||||||| |||||||||||||||||||||
Sbjct: 1101054 ga------ggccggcgccggcgccggcaaggcccccgtcatcgacgtcacgcagttcggc 1101107
Query: 362 tacttcaaggtgctcgggaagggggtgctgccgcca---aagcccattgtcgtcaaggcc 418
||| |||||||||||| |||||| |||| || ||| | |||||| ||||||||||||
Sbjct: 1101108 tacaccaaggtgctcggcaaggggatgctccccccagagaggcccatcgtcgtcaaggcc 1101167
Query: 419 aagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggcgccgtcgtgctc 478
|||||||||||||||||||||||||||||||||||||| || |||||||||||| | |||
Sbjct: 1101168 aagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggcgccgtcctcctc 1101227
Query: 479 accgcctaggt 489
|||||||||||
Sbjct: 1101228 accgcctaggt 1101238
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 408 bits (206), Expect = e-111
Identities = 375/431 (87%), Gaps = 9/431 (2%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||| |||
Sbjct: 4134966 ttcaagaagaaccggaagaagcgcgggcacgtgtcggccgggcacgggcggatcgggaag 4135025
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| |||||||||||||||| ||||| |||||||| || |||||||||||||| |||||
Sbjct: 4135026 caccggaagcacccgggagggcgcgggaacgccggcgggatgcaccaccaccgcatcctg 4135085
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
|||||||||||||| |||||||||||||||||||| || ||||| |||||||| | ||||
Sbjct: 4135086 ttcgacaagtaccacccgggctacttcggcaaggtcgggatgcgctacttccacaggctc 4135145
Query: 242 cgcaacaagttctactgccccgcggtcaacatcgagcgcctctggtcgatggtgcccacc 301
|||||| |||| |||||||||| |||||| |||||||||||||||| ||||||||| ||
Sbjct: 4135146 agcaacaggttccactgccccgccgtcaacgtcgagcgcctctggtccatggtgcccgcc 4135205
Query: 302 gacaaggcggcggaggccggcggcgacaaggccccgcagatcgacgtcacgcagttcggc 361
|| ||| | ||||||| || ||||||||| |||||||||||||||||||||
Sbjct: 4135206 ga------ggccggcgccggcgccggcaaggcccccgtcatcgacgtcacgcagttcggc 4135259
Query: 362 tacttcaaggtgctcgggaagggggtgctgccgcca---aagcccattgtcgtcaaggcc 418
||| |||||||||||| |||||| |||| || ||| | |||||| ||||||||||||
Sbjct: 4135260 tacaccaaggtgctcggcaaggggatgctccccccagagaggcccatcgtcgtcaaggcc 4135319
Query: 419 aagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggcgccgtcgtgctc 478
|||||||||||||||||||||||||||||||||||||| || |||||||||||| | |||
Sbjct: 4135320 aagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggcgccgtcctcctc 4135379
Query: 479 accgcctaggt 489
|||||||||||
Sbjct: 4135380 accgcctaggt 4135390
>gb|AACV01003455.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003455, whole
genome shotgun sequence
Length = 34861
Score = 404 bits (204), Expect = e-110
Identities = 376/431 (87%), Gaps = 8/431 (1%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||| |||
Sbjct: 19272 ttcaagaagaaccggaagaagcgcgggcacgtgtcggccgggcacgggcggatcgggaag 19331
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| |||||||||||||||| ||||| |||||||| || |||||||||||||| |||||
Sbjct: 19332 caccggaagcacccgggagggcgcgggaacgccggcgggatgcaccaccaccgcatcctg 19391
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
|||||||||||||| |||||||||||||||||||| || ||||| |||||||| | ||||
Sbjct: 19392 ttcgacaagtaccacccgggctacttcggcaaggtcgggatgcgctacttccacaggctc 19451
Query: 242 cgcaacaagttctactgccccgcggtcaacatcgagcgcctctggtcgatggtgcccacc 301
|||||| |||| |||||||||| |||||| |||||||||||||||| ||||||||| ||
Sbjct: 19452 agcaacaggttccactgccccgccgtcaacgtcgagcgcctctggtccatggtgcccgcc 19511
Query: 302 gacaaggcggcggaggccggcggcgacaaggccccgcagatcgacgtcacgcagttcggc 361
| |||| | | ||||||| || ||||||||| |||||||||||||||||||||
Sbjct: 19512 g---aggc--ccggcgccggcgccggcaaggcccccgtcatcgacgtcacgcagttcggc 19566
Query: 362 tacttcaaggtgctcgggaagggggtgctgccgcca---aagcccattgtcgtcaaggcc 418
||| |||||||||||| |||||| |||| || ||| | |||||| ||||||||||||
Sbjct: 19567 tacaccaaggtgctcggcaaggggatgctccccccagagaggcccatcgtcgtcaaggcc 19626
Query: 419 aagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggcgccgtcgtgctc 478
|||||||||||||||||||||||||||||||||||||| || |||||||||||| | |||
Sbjct: 19627 aagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggcgccgtcctcctc 19686
Query: 479 accgcctaggt 489
|||||||||||
Sbjct: 19687 accgcctaggt 19697
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 404 bits (204), Expect = e-110
Identities = 376/431 (87%), Gaps = 8/431 (1%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||| |||
Sbjct: 4198635 ttcaagaagaaccggaagaagcgcgggcacgtgtcggccgggcacgggcggatcgggaag 4198694
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| |||||||||||||||| ||||| |||||||| || |||||||||||||| |||||
Sbjct: 4198695 caccggaagcacccgggagggcgcgggaacgccggcgggatgcaccaccaccgcatcctg 4198754
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
|||||||||||||| |||||||||||||||||||| || ||||| |||||||| | ||||
Sbjct: 4198755 ttcgacaagtaccacccgggctacttcggcaaggtcgggatgcgctacttccacaggctc 4198814
Query: 242 cgcaacaagttctactgccccgcggtcaacatcgagcgcctctggtcgatggtgcccacc 301
|||||| |||| |||||||||| |||||| |||||||||||||||| ||||||||| ||
Sbjct: 4198815 agcaacaggttccactgccccgccgtcaacgtcgagcgcctctggtccatggtgcccgcc 4198874
Query: 302 gacaaggcggcggaggccggcggcgacaaggccccgcagatcgacgtcacgcagttcggc 361
| |||| | | ||||||| || ||||||||| |||||||||||||||||||||
Sbjct: 4198875 g---aggc--ccggcgccggcgccggcaaggcccccgtcatcgacgtcacgcagttcggc 4198929
Query: 362 tacttcaaggtgctcgggaagggggtgctgccgcca---aagcccattgtcgtcaaggcc 418
||| |||||||||||| |||||| |||| || ||| | |||||| ||||||||||||
Sbjct: 4198930 tacaccaaggtgctcggcaaggggatgctccccccagagaggcccatcgtcgtcaaggcc 4198989
Query: 419 aagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggcgccgtcgtgctc 478
|||||||||||||||||||||||||||||||||||||| || |||||||||||| | |||
Sbjct: 4198990 aagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggcgccgtcctcctc 4199049
Query: 479 accgcctaggt 489
|||||||||||
Sbjct: 4199050 accgcctaggt 4199060
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 404 bits (204), Expect = e-110
Identities = 376/431 (87%), Gaps = 8/431 (1%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||| |||
Sbjct: 4198635 ttcaagaagaaccggaagaagcgcgggcacgtgtcggccgggcacgggcggatcgggaag 4198694
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| |||||||||||||||| ||||| |||||||| || |||||||||||||| |||||
Sbjct: 4198695 caccggaagcacccgggagggcgcgggaacgccggcgggatgcaccaccaccgcatcctg 4198754
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
|||||||||||||| |||||||||||||||||||| || ||||| |||||||| | ||||
Sbjct: 4198755 ttcgacaagtaccacccgggctacttcggcaaggtcgggatgcgctacttccacaggctc 4198814
Query: 242 cgcaacaagttctactgccccgcggtcaacatcgagcgcctctggtcgatggtgcccacc 301
|||||| |||| |||||||||| |||||| |||||||||||||||| ||||||||| ||
Sbjct: 4198815 agcaacaggttccactgccccgccgtcaacgtcgagcgcctctggtccatggtgcccgcc 4198874
Query: 302 gacaaggcggcggaggccggcggcgacaaggccccgcagatcgacgtcacgcagttcggc 361
| |||| | | ||||||| || ||||||||| |||||||||||||||||||||
Sbjct: 4198875 g---aggc--ccggcgccggcgccggcaaggcccccgtcatcgacgtcacgcagttcggc 4198929
Query: 362 tacttcaaggtgctcgggaagggggtgctgccgcca---aagcccattgtcgtcaaggcc 418
||| |||||||||||| |||||| |||| || ||| | |||||| ||||||||||||
Sbjct: 4198930 tacaccaaggtgctcggcaaggggatgctccccccagagaggcccatcgtcgtcaaggcc 4198989
Query: 419 aagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggcgccgtcgtgctc 478
|||||||||||||||||||||||||||||||||||||| || |||||||||||| | |||
Sbjct: 4198990 aagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggcgccgtcctcctc 4199049
Query: 479 accgcctaggt 489
|||||||||||
Sbjct: 4199050 accgcctaggt 4199060
>gb|CO436043.1|CO436043 OsMR965 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 652
Score = 394 bits (199), Expect = e-107
Identities = 324/365 (88%), Gaps = 3/365 (0%)
Strand = Plus / Plus
Query: 128 aagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctcttcgac 187
|||||||| ||||| |||||||||||||| || |||||||||||||| ||||| ||||||
Sbjct: 69 aagcaccccggaggccgcggtaacgccggagggatgcaccaccaccggatcctgttcgac 128
Query: 188 aagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctccgcaac 247
|||||||| |||||||||||||||||||| |||||||| |||||||| |||||| |||||
Sbjct: 129 aagtaccacccgggctacttcggcaaggtcggcatgcgctacttccacaagctcagcaac 188
Query: 248 aagttctactgccccgcggtcaacatcgagcgcctctggtcgatggtgcccaccgacaag 307
| |||| |||||||||| |||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 189 aggttccactgccccgccgtcaacgtcgagcgcctctggtccatggtgcccaccgacaag 248
Query: 308 gcggcggaggccggcggcgacaaggccccgcagatcgacgtcacgcagttcggctacttc 367
|| || |||||||||| || ||||||||| ||||||||||| |||||||||||| |
Sbjct: 249 gccgccgaggccggcgccggcaaggcccccgtcatcgacgtcacccagttcggctacacc 308
Query: 368 aaggtgctcgggaagggggtgct---gccgccaaagcccattgtcgtcaaggccaagctc 424
||||||||||| |||||| |||| |||| | |||||| ||||||||||||||||||
Sbjct: 309 aaggtgctcggcaaggggatgcttcccccgcagaggcccatcgtcgtcaaggccaagctc 368
Query: 425 atctccaaggtcgccgagaagaagatcaaggcagcaggcggcgccgtcgtgctcaccgcc 484
|||||||||||||||||||||||||||||||| || |||||||||||| | |||||||||
Sbjct: 369 atctccaaggtcgccgagaagaagatcaaggccgccggcggcgccgtcctcctcaccgcc 428
Query: 485 taggt 489
|||||
Sbjct: 429 taggt 433
>gb|CB679235.1|CB679235 OSJNEf02H20.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf02H20 3', mRNA sequence
Length = 691
Score = 392 bits (198), Expect = e-107
Identities = 373/431 (86%), Gaps = 9/431 (2%)
Strand = Plus / Minus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||| |||
Sbjct: 611 ttcaagaagaaccggaagaagcgcgggcacgtgtcggccgggcacgggcggatcgggaag 552
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| |||||||||||||||| ||||| |||||||| || |||||||||| ||| |||||
Sbjct: 551 caccggaagcacccgggagggcgcgggaacgccggcgggatgcaccacccccgcatcctg 492
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
|||||||||| ||| |||||||||||||||||||| || ||||| |||||||| | ||||
Sbjct: 491 ttcgacaagtcccacccgggctacttcggcaaggtcgggatgcgctacttccacaggctc 432
Query: 242 cgcaacaagttctactgccccgcggtcaacatcgagcgcctctggtcgatggtgcccacc 301
|||||| |||| |||||||||| |||||| |||||||||||||||| ||||||||| ||
Sbjct: 431 agcaacaggttccactgccccgccgtcaacgtcgagcgcctctggtccatggtgcccgcc 372
Query: 302 gacaaggcggcggaggccggcggcgacaaggccccgcagatcgacgtcacgcagttcggc 361
|| ||| | ||||||| || ||||||||| |||||||||||||||||||||
Sbjct: 371 ga------ggccggcgccggcgccggcaaggcccccgtcatcgacgtcacgcagttcggc 318
Query: 362 tacttcaaggtgctcgggaagggggtgctgccgcca---aagcccattgtcgtcaaggcc 418
||| |||||||||||| |||||| |||| || ||| | |||||| ||||||||||||
Sbjct: 317 taccccaaggtgctcggcaaggggatgctccccccagagaggcccatcgtcgtcaaggcc 258
Query: 419 aagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggcgccgtcgtgctc 478
|||||||||||||||||||||||||||||||||||||| || |||||||||||| | |||
Sbjct: 257 aagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggcgccgtcctcctc 198
Query: 479 accgcctaggt 489
|||||||||||
Sbjct: 197 accgcctaggt 187
>gb|C27507.1|C27507 C27507 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C52076_1A, mRNA sequence
Length = 290
Score = 291 bits (147), Expect = 3e-076
Identities = 231/259 (89%), Gaps = 1/259 (0%)
Strand = Plus / Plus
Query: 50 atgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggc 109
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 19 atgacaacgcgcttcaagaagaaccggaagaagcgcggccacgtgtcggccgggcacggg 78
Query: 110 cgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccac 169
|||||||| |||||| | |||||||| ||||| ||||||||||| || || |||||||||
Sbjct: 79 cgcatcgggaagcaccgcaagcaccccggaggccgcggtaacgc-ggagggatgcaccac 137
Query: 170 caccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttac 229
||||| |||| |||||||||||||| |||||||||||||||||||| |||||||| |||
Sbjct: 138 caccggntcctgttcgacaagtaccacccgggctacttcggcaaggtcggcatgcgctac 197
Query: 230 ttccataagctccgcaacaagttctactgccccgcggtcaacatcgagcgcctctggtcg 289
||||| |||||| |||||| |||| |||||||||| || ||| | ||||| ||||||||
Sbjct: 198 ttccacaagctcagcaacaggttccactgccccgccgtnaacgtngagcggctctggtcc 257
Query: 290 atggtgcccaccgacaagg 308
|||||||||||| ||||||
Sbjct: 258 atggtgcccaccnacaagg 276
>gb|C27541.1|C27541 C27541 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C52159_1A, mRNA sequence
Length = 457
Score = 274 bits (138), Expect = 6e-071
Identities = 243/276 (88%), Gaps = 2/276 (0%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
||||| |||||||||| ||| || | | ||||||||||||||||||||||||||||||||
Sbjct: 18 cggcgacggcgatgacgacgagcctgaggaagaaccgcaagaagcgcggccacgtgtccg 77
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||| |||||| ||||||| |||||| |||||||||||||||| || || ||||| || |
Sbjct: 78 ccggccacggc-gcatcgggaagcaccggaagcacccgggaggccggggcaacgc-ggag 135
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
| |||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 136 gatngcaccaccaccgnatcctcttcgacaagtaccacccgggctacttcggcaaggtcg 195
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
||||||| |||||||| | |||||||||||||||||||| ||| ||||| ||| | ||||
Sbjct: 196 gcatgcgctacttccacaggctccgcaacaagttctactccccggcggtgaacgtggagc 255
Query: 279 gcctctggtcgatggtgcccaccgacaaggcggcgg 314
| |||||||||||||||||| |||| |||||||||
Sbjct: 256 ggctctggtcgatggtgcccgccgagcaggcggcgg 291
Score = 73.8 bits (37), Expect = 1e-010
Identities = 100/113 (88%), Gaps = 6/113 (5%)
Strand = Plus / Plus
Query: 344 gacgtcacgcagttcgg-ctactt-caaggtgct-cgggaagggggtgct-gccgccaaa 399
||||| ||||||||||| |||||| ||||||||| ||||||||| |||| |||| ||
Sbjct: 327 gacgtgacgcagttcgggctactttcaaggtgcttcgggaagggtctgcttgccggagaa 386
Query: 400 gcccattgtcgtcaaggccaagc-tcatctccaagg-tcgccgagaagaagat 450
|||||| |||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 387 gcccatcgtcgtcaaggccaagcttcatctccaaggttcgccgagaagaagat 439
>gb|AU085696.1|AU085696 AU085696 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C20016, mRNA sequence
Length = 381
Score = 274 bits (138), Expect = 6e-071
Identities = 216/242 (89%)
Strand = Plus / Minus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||| |||
Sbjct: 319 ttcaagaagaaccggaagaagcgcgggcacgtgtcggccgggcacgggcggatcgggaag 260
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| |||||||||||||||| ||||| |||||||| || |||||||||||||| |||||
Sbjct: 259 caccggaagcacccgggagggcgcgggaacgccggcgggatgcaccaccaccgcatcctg 200
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
|||||||||||||| |||||||||||||||||||| || ||||| |||||||| | ||||
Sbjct: 199 ttcgacaagtaccacccgggctacttcggcaaggtcgggatgcgctacttccacaggctc 140
Query: 242 cgcaacaagttctactgccccgcggtcaacatcgagcgcctctggtcgatggtgcccacc 301
|||||| |||| |||||||||| |||||| |||||||||||||||| ||||||||| ||
Sbjct: 139 agcaacaggttccactgccccgccgtcaacgtcgagcgcctctggtccatggtgcccgcc 80
Query: 302 ga 303
||
Sbjct: 79 ga 78
Score = 52.0 bits (26), Expect = 4e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 348 tcacgcagttcggctacttcaaggtgctcgggaagggg 385
||||||||||||||||| |||||||||||| ||||||
Sbjct: 39 tcacgcagttcggctacaccaaggtgctcggcaagggg 2
>gb|CV730110.1|CV730110 FLO--03-H19.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--03-H19,
mRNA sequence
Length = 326
Score = 264 bits (133), Expect = 6e-068
Identities = 237/269 (88%), Gaps = 2/269 (0%)
Strand = Plus / Plus
Query: 57 cgcgcttcaag-aagaaccgc-aagaagcgcggccacgtgtccgccgggcacggccgcat 114
||||||||||| |||||||| || ||||||||||||||||| ||||||||||| |||||
Sbjct: 52 cgcgcttcaagtaagaaccggtaataagcgcggccacgtgtcggccgggcacgggcgcat 111
Query: 115 cggcaagcacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccg 174
||| |||||| | |||||||| ||||| |||||||||||||| || ||||||||||||||
Sbjct: 112 cgggaagcaccgcaagcaccccggaggccgcggtaacgccggagggatgcaccaccaccg 171
Query: 175 tatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttcca 234
||||| |||||||||||||| ||||||||||| |||| |||||||| ||||||||
Sbjct: 172 gatcctgttcgacaagtaccacccgggctactttttttaggtcggcatgcgctacttcca 231
Query: 235 taagctccgcaacaagttctactgccccgcggtcaacatcgagcgcctctggtcgatggt 294
|||||| |||||| |||| |||||||||| |||||| |||||||||||||||| |||||
Sbjct: 232 caagctcagcaacaggttccactgccccgccgtcaacgtcgagcgcctctggtccatggt 291
Query: 295 gcccaccgacaaggcggcggaggccggcg 323
||||||||||||||| || ||||||||||
Sbjct: 292 gcccaccgacaaggccgccgaggccggcg 320
>gb|D16093.1|D16093 RICC3073A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C3073A, mRNA sequence
Length = 371
Score = 262 bits (132), Expect = 2e-067
Identities = 228/260 (87%), Gaps = 1/260 (0%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
||||| |||||||||| ||| || | | ||||||||||||||||||||||||||||||||
Sbjct: 20 cggcgncggcgatgacgacgagcctnaggaagaaccgcaagaagcgcggccacgtgtccg 79
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||| ||||| |||||||| |||||| |||||||||||||||| || || |||| || |
Sbjct: 80 ccggccacggacgcatcgggaagcaccggaagcacccgggaggccggggcaacgn-ggag 138
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttg 218
|||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 139 natagcaccaccaccgcatcctcttcgacaagtaccacccgggctacttcggcaaggtcg 198
Query: 219 gcatgcgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagc 278
||||||| |||||||| | |||||||||||||||||||| ||| ||||| ||| | ||||
Sbjct: 199 gcatgcgctacttccacaggctccgcaacaagttctactccccggcggtgaacgtggagc 258
Query: 279 gcctctggtcgatggtgccc 298
| ||||||||||||||||||
Sbjct: 259 ggctctggtcgatggtgccc 278
Score = 56.0 bits (28), Expect = 3e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 356 ttcggctacttcaaggtgctcgggaagg 383
||||||||||||||||||||||||||||
Sbjct: 340 ttcggctacttcaaggtgctcgggaagg 367
>gb|AU160891.1|AU160891 AU160891 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52159, mRNA sequence
Length = 476
Score = 262 bits (132), Expect = 2e-067
Identities = 222/252 (88%), Gaps = 3/252 (1%)
Strand = Plus / Plus
Query: 240 tccgcaacaagttctactgccccgcggtcaacatcgagcgcctctggtcgatggtgccca 299
|||||||||||||||||| ||| ||||| ||| | ||||| |||||||||||||| |||
Sbjct: 13 tccgcaacaagttctactccccggcggtgaacgtggagcggctctggtcgatggtncccg 72
Query: 300 ccgacaaggcggcggaggccggcggcgac---aaggccccgcagatcgacgtcacgcagt 356
|||| ||||||||||||||| ||||| | ||||| || | | | ||||| |||||||
Sbjct: 73 ccgagcaggcggcggaggccgccggcgccggcaaggcgcccctgctggacgtgacgcagt 132
Query: 357 tcggctacttcaaggtgctcgggaagggggtgctgccgccaaagcccattgtcgtcaagg 416
|||||||||||||||||||||||||||| |||||||| ||||| || ||||||||||
Sbjct: 133 tcggctacttcaaggtgctcgggaagggtctgctgccggagaagccnatcgtcgtcaagg 192
Query: 417 ccaagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggcgccgtcgtgc 476
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 193 ccaagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggcgccgtcgtgc 252
Query: 477 tcaccgcctagg 488
||||||||||||
Sbjct: 253 tcaccgcctagg 264
>gb|AU091401.1|AU091401 AU091401 Rice immature leaf including apical meristem (under long
day condition) Oryza sativa (japonica cultivar-group)
cDNA clone E50442, mRNA sequence
Length = 463
Score = 244 bits (123), Expect = 5e-062
Identities = 194/217 (89%), Gaps = 3/217 (1%)
Strand = Plus / Plus
Query: 275 gagcgcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgac---aag 331
||||| |||||||||||||||||| |||| ||||||||||||||| ||||| | |||
Sbjct: 1 gagcggctctggtcgatggtgcccgccgagcaggcggcggaggccgccggcgccggcaag 60
Query: 332 gccccgcagatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctg 391
|| || | | | ||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61 gcgcccctgctggacgtgacgcagttcggctacttcaaggtgctcgggaagggtctgctg 120
Query: 392 ccgccaaagcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatc 451
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccggagaagcccatcgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatc 180
Query: 452 aaggcagcaggcggcgccgtcgtgctcaccgcctagg 488
||||| || ||||||||||||||||||||||||||||
Sbjct: 181 aaggccgccggcggcgccgtcgtgctcaccgcctagg 217
>gb|CV722617.1|CV722617 root--01-A22.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone
root--01-A22, mRNA sequence
Length = 265
Score = 230 bits (116), Expect = 8e-058
Identities = 185/208 (88%)
Strand = Plus / Plus
Query: 62 ttcaagaagaaccgcaagaagcgcggccacgtgtccgccgggcacggccgcatcggcaag 121
|||||||||||||| ||||||||||| |||||||| ||||||||||| || ||||| |||
Sbjct: 58 ttcaagaagaaccggaagaagcgcgggcacgtgtcggccgggcacgggcggatcgggaag 117
Query: 122 cacaggaagcacccgggaggtcgcggtaacgccggtggcatgcaccaccaccgtatcctc 181
||| |||||||||||||||| ||||| |||||||| || |||||||||||||| |||||
Sbjct: 118 caccggaagcacccgggagggcgcgggaacgccggcgggatgcaccaccaccgcatcctg 177
Query: 182 ttcgacaagtaccatccgggctacttcggcaaggttggcatgcgttacttccataagctc 241
|||||||||||||| |||||||||||||||||||| || ||||| |||||||| | ||||
Sbjct: 178 ttcgacaagtaccacccgggctacttcggcaaggtcgggatgcgctacttccacaggctc 237
Query: 242 cgcaacaagttctactgccccgcggtca 269
|||||| |||| |||||||||| ||||
Sbjct: 238 agcaacaggttccactgccccgccgtca 265
>gb|CX728879.1|CX728879 OSJNEf15A01.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf15A01 3', mRNA sequence
Length = 421
Score = 224 bits (113), Expect = 5e-056
Identities = 211/243 (86%), Gaps = 3/243 (1%)
Strand = Plus / Minus
Query: 250 gttctactgccccgcggtcaacatcgagcgcctctggtcgatggtgcccaccgacaaggc 309
|||| |||||||||| |||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 417 gttccactgccccgccgtcaacgtcgagcgcctctggtccatggtgcccaccgacaaggc 358
Query: 310 ggcggaggccggcggcgacaaggccccgcagatcgacgtcacgcagttcggctacttcaa 369
|| |||||||||| || ||||||||| || |||||||| |||||||||||| |||
Sbjct: 357 cgccgaggccggcgccggcaaggcccccgtcatggacgtcacccagttcggctacaccaa 298
Query: 370 ggtgctcgggaagggggtgct---gccgccaaagcccattgtcgtcaaggccaagctcat 426
||||||||| |||||| |||| |||| | |||||||||||||||||||||||||||
Sbjct: 297 ggtgctcggcaaggggatgcttcccccgcagaggcccattgtcgtcaaggccaagctcat 238
Query: 427 ctccaaggtcgccgagaagaagatcaaggcagcaggcggcgccgtcgtgctcaccgccta 486
|||||||||||||| ||||||||||||| | || |||||||||||| | ||| |||||||
Sbjct: 237 ctccaaggtcgccgcgaagaagatcaagtccgccggcggcgccgtcctcctccccgccta 178
Query: 487 ggt 489
|||
Sbjct: 177 ggt 175
>gb|CB684973.1|CB684973 OSJNEf15A01.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf15A01 5', mRNA sequence
Length = 428
Score = 218 bits (110), Expect = 3e-054
Identities = 193/220 (87%), Gaps = 3/220 (1%)
Strand = Plus / Plus
Query: 273 tcgagcgcctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaagg 332
|||||||||||||||| |||||||||||||||||||| || |||||||||| || ||| |
Sbjct: 28 tcgagcgcctctggtccatggtgcccaccgacaaggccgccgaggccggcgccggcaacg 87
Query: 333 ccccgcagatcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgc 392
|||| ||||||||||| |||||||||||| |||||||||||| |||||| |||| |
Sbjct: 88 cccccgtcatcgacgtcacccagttcggctacaccaaggtgctcggcaaggggatgcttc 147
Query: 393 cgccaaag---cccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaaga 449
| || || ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 ccccgcagaggcccatcgtcgtcaaggccaagctcatctccaaggtcgccgagaagaaga 207
Query: 450 tcaaggcagcaggcggcgccgtcgtgctcaccgcctaggt 489
||||||| || |||||||||||| | ||||||||||||||
Sbjct: 208 tcaaggccgccggcggcgccgtcctcctcaccgcctaggt 247
>gb|CB685679.1|CB685679 OSJNEf16E24.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf16E24 5', mRNA sequence
Length = 426
Score = 210 bits (106), Expect = 7e-052
Identities = 186/212 (87%), Gaps = 3/212 (1%)
Strand = Plus / Plus
Query: 281 ctctggtcgatggtgcccaccgacaaggcggcggaggccggcggcgacaaggccccgcag 340
|||||||| |||||||||||||||||||| || |||||||||| || |||||||||
Sbjct: 16 ctctggtccatggtgcccaccgacaaggccgccgaggccggcgccggcaaggcccccgtc 75
Query: 341 atcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaaag 400
||||||||||| |||||||||||| |||||||||||| |||||| |||| || || ||
Sbjct: 76 atcgacgtcacccagttcggctacaccaaggtgctcggcaaggggatgcttcccccgcag 135
Query: 401 ---cccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggca 457
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 aggcccatcgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcc 195
Query: 458 gcaggcggcgccgtcgtgctcaccgcctaggt 489
|| |||||||||||| | ||||||||||||||
Sbjct: 196 gccggcggcgccgtcctcctcaccgcctaggt 227
>gb|AU225500.1|AU225500 AU225500 Oryza sativa Koshihikari pistil Oryza sativa (japonica
cultivar-group) cDNA clone KP3-0463, mRNA sequence
Length = 376
Score = 200 bits (101), Expect = 7e-049
Identities = 125/133 (93%)
Strand = Plus / Minus
Query: 356 ttcggctacttcaaggtgctcgggaagggggtgctgccgccaaagcccattgtcgtcaag 415
||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||
Sbjct: 362 ttcggctacttcaaggtgctcgggaagggtctgctgccggagaagcccatcgtcgtcaag 303
Query: 416 gccaagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggcgccgtcgtg 475
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 302 gccaagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggcgccgtcgtg 243
Query: 476 ctcaccgcctagg 488
|||||||||||||
Sbjct: 242 ctcaccgcctagg 230
>gb|AU029992.1|AU029992 AU029992 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E50442_1A, mRNA sequence
Length = 275
Score = 182 bits (92), Expect = 2e-043
Identities = 199/230 (86%), Gaps = 4/230 (1%)
Strand = Plus / Plus
Query: 39 cggcggcggcgatgacaacgcgcttcaagaagaaccgcaagaagcgcggccacgtgtccg 98
||||| |||||||||| ||| || | | ||||||||||||||||||||||||||||||||
Sbjct: 26 cggcgacggcgatgacgacgagcctgaggaagaaccgcaagaagcgcggccacgtgtccg 85
Query: 99 ccgggcacggccgcatcggcaagcacaggaagcacccgggaggtcgcggtaacgccggtg 158
|||| ||| |||||||||| |||||| |||||||||||||||| || || |||| ||| |
Sbjct: 86 ccggccac-gccgcatcgggaagcaccggaagcacccgggaggccggggcaacg-cggag 143
Query: 159 gcatgcaccaccaccgtatcctcttcgacaagtaccatccgggctac-ttcggcaaggtt 217
| ||||||||||||| |||||||||||||||||||| ||||||||| |||||||| ||
Sbjct: 144 gattgcaccaccaccgcatcctcttcgacaagtaccacccgggctactttcggcaangtc 203
Query: 218 ggcatgcgttacttccataagctccgcaacaagttctactgccccgcggt 267
|||||||| || ||||| | | |||||||||| ||||| | ||| |||||
Sbjct: 204 ggcatgcg-tatttccacaggttccgcaacaatttctattncccggcggt 252
>gb|C97181.1|C97181 C97181 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52905_1A, mRNA sequence
Length = 298
Score = 174 bits (88), Expect = 4e-041
Identities = 127/140 (90%)
Strand = Plus / Plus
Query: 164 caccaccaccgtatcctcttcgacaagtaccatccgggctacttcggcaaggttggcatg 223
||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 141 caccaccaccgcatcctcttcgacaagtaccacccgggctacttcggcaaggtcggcatg 200
Query: 224 cgttacttccataagctccgcaacaagttctactgccccgcggtcaacatcgagcgcctc 283
|| |||||||| | |||||||||||||||||||| ||| ||||| ||| | ||||| |||
Sbjct: 201 cgctacttccacaggctccgcaacaagttctactccccggcggtgaacgtggagcggctc 260
Query: 284 tggtcgatggtgcccaccga 303
||||||||||||||| ||||
Sbjct: 261 tggtcgatggtgcccgccga 280
Score = 67.9 bits (34), Expect = 7e-009
Identities = 66/74 (89%), Gaps = 2/74 (2%)
Strand = Plus / Plus
Query: 67 gaagaaccgcaagaagcgcggccacgtgtccgccgggcacg-gccgcatcggcaagcaca 125
|||||||||||| ||||||||||||||||||||||| |||| || | | ||| ||||||
Sbjct: 46 gaagaaccgcaataagcgcggccacgtgtccgccggccacgcgcagta-cgggaagcacc 104
Query: 126 ggaagcacccggga 139
||||||||||||||
Sbjct: 105 ggaagcacccggga 118
>gb|C72433.1|C72433 C72433 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1613_1A, mRNA sequence
Length = 458
Score = 170 bits (86), Expect = 6e-040
Identities = 142/161 (88%)
Strand = Plus / Plus
Query: 143 cgcggtaacgccggtggcatgcaccaccaccgtatcctcttcgacaagtaccatccgggc 202
||||| |||| ||| || |||||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 10 cgcgggaacgncggcgggatgcaccaccaccgcatcctgttcgacaagtaccacccgggc 69
Query: 203 tacttcggcaaggttggcatgcgttacttccataagctccgcaacaagttctactgcccc 262
|||||||||||||| || ||||| |||||||| | |||| |||||| |||| ||||||||
Sbjct: 70 tacttcggcaaggtcgggatgcgctacttccacaggctcagcaacaggttccactgcccc 129
Query: 263 gcggtcaacatcgagcgcctctggtcgatggtgcccaccga 303
|| |||||| |||||||||||||||| ||||||||| ||||
Sbjct: 130 gccgtcaacgtcgagcgcctctggtccatggtgcccgccga 170
Score = 153 bits (77), Expect = 2e-034
Identities = 136/153 (88%), Gaps = 5/153 (3%)
Strand = Plus / Plus
Query: 341 atcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaaag 400
|||||||||||||||||||||||| |||||||||||| |||||| |||| || ||| ||
Sbjct: 202 atcgacgtcacgcagttcggctacaccaaggtgctcggcaaggggatgctccccccagag 261
Query: 401 ---cccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggca 457
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aggcccatcgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcc 321
Query: 458 gcaggcggcgccgt-cgtgctcaccgcctaggt 489
|| ||||| ||||| ||| |||| |||||||||
Sbjct: 322 gccggcgg-gccgtccgtnctcancgcctaggt 353
>gb|AU173389.1|AU173389 AU173389 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2715, mRNA sequence
Length = 387
Score = 170 bits (86), Expect = 6e-040
Identities = 168/195 (86%), Gaps = 3/195 (1%)
Strand = Plus / Plus
Query: 298 caccgacaaggcggcggaggccggcggcgacaaggccccgcagatcgacgtcacgcagtt 357
|||||||||||| || |||||||||| || ||||||||| || ||||||| |||||
Sbjct: 2 caccgacaaggccgccgaggccggcgccggcaaggcccccgtcattnacgtcacccagtt 61
Query: 358 cggctacttcaaggtgctcgggaagggggtgctgccgccaaag---cccattgtcgtcaa 414
||||||| |||||||||||| |||||| |||| || || || ||||| ||||||||
Sbjct: 62 cggctacaccaaggtgctcggcaaggggatgcttcccccgcagaggcccatcgtcgtcaa 121
Query: 415 ggccaagctcatctccaaggtcgccgagaagaagatcaaggcagcaggcggcgccgtcgt 474
|||||||||||||||||||||||||||||||||||||||||| || |||||||||||| |
Sbjct: 122 ggccaagctcatctccaaggtcgccgagaagaagatcaaggccgccggcggcgccgtcct 181
Query: 475 gctcaccgcctaggt 489
||||||||||||||
Sbjct: 182 cctcaccgcctaggt 196
>gb|AU088563.1|AU088563 AU088563 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C20016, mRNA sequence
Length = 343
Score = 165 bits (83), Expect = 4e-038
Identities = 137/153 (89%), Gaps = 4/153 (2%)
Strand = Plus / Minus
Query: 341 atcgacgtcacgcagttcggctacttc-aaggtgctcgggaagggggtgctgccgccaaa 399
|||||||||||||||||||||||| | ||||||||||| |||||| |||| || ||| |
Sbjct: 308 atcgacgtcacgcagttcggctacaccnaaggtgctcggcaaggggatgctccccccaga 249
Query: 400 g---cccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggc 456
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gaggcccatcgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggc 189
Query: 457 agcaggcggcgccgtcgtgctcaccgcctaggt 489
|| |||||||||||| | ||||||||||||||
Sbjct: 188 cgccggcggcgccgtcctcctcaccgcctaggt 156
>gb|AU058360.1|AU058360 AU058360 Oryza sativa Nipponbare immature leaf including apical
meristem (under long day condition) Oryza sativa
(japonica cultivar-group) cDNA clone E50664_2Z, mRNA
sequence
Length = 603
Score = 151 bits (76), Expect = 6e-034
Identities = 133/152 (87%), Gaps = 3/152 (1%)
Strand = Plus / Plus
Query: 341 atcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgct---gccgcca 397
||||||||||| |||||||||||| |||||||||||| |||||| |||| ||||
Sbjct: 238 atcgacgtcacccagttcggctacaccaaggtgctcggcaaggggatgcttcccccgcag 297
Query: 398 aagcccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggca 457
| |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 298 aggcccatcgtcgtcaaggccaagctcatctccaaggtcgccgagaagnngatcaaggcc 357
Query: 458 gcaggcggcgccgtcgtgctcaccgcctaggt 489
|| |||||||||||| | ||||||||||||||
Sbjct: 358 gccggcggcgccgtcctcctcaccgcctaggt 389
>gb|AU058021.1|AU058021 AU058021 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C60318_1A, mRNA sequence
Length = 396
Score = 147 bits (74), Expect = 9e-033
Identities = 134/152 (88%), Gaps = 4/152 (2%)
Strand = Plus / Plus
Query: 341 atcgacgtcacgcagttcggctacttcaaggtgctcgggaagggggtgctgccgccaaag 400
||||||||||| |||||||||||| |||||||||||| |||||| |||| || || ||
Sbjct: 6 atcgacgtcacccagttcggctacaccaaggtgctcggcaaggggatgcttcccccgcag 65
Query: 401 ---cccattgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggca 457
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 aggcccatcgtcgtcaaggccaagctcatctccaaggtcgccgagaagaagatcaaggcc 125
Query: 458 gcaggcggcgccgtcgtgctcaccgcctaggt 489
|| ||||| |||||| | ||||||||||||||
Sbjct: 126 gccggcgg-gccgtcctcctcaccgcctaggt 156
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,875,235
Number of Sequences: 438736
Number of extensions: 1875235
Number of successful extensions: 21181
Number of sequences better than 0.5: 74
Number of HSP's better than 0.5 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20438
Number of HSP's gapped (non-prelim): 700
length of query: 699
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 678
effective length of database: 2,791,206,460
effective search space: 1892437979880
effective search space used: 1892437979880
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)