BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440806.2.1
(1136 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK070509.1| Oryza sativa (japonica cultivar-group) cDNA... 351 5e-094
gb|AACV01013018.1| Oryza sativa (japonica cultivar-group) c... 301 4e-079
dbj|AP003487.2| Oryza sativa (japonica cultivar-group) geno... 301 4e-079
dbj|AP003767.3| Oryza sativa (japonica cultivar-group) geno... 301 4e-079
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 301 4e-079
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 301 4e-079
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 301 4e-079
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 301 4e-079
gb|AACV01013020.1| Oryza sativa (japonica cultivar-group) c... 170 1e-039
dbj|AK100191.1| Oryza sativa (japonica cultivar-group) cDNA... 163 3e-037
dbj|AP004780.1| Oryza sativa (japonica cultivar-group) chro... 161 1e-036
dbj|AK101009.1| Oryza sativa (japonica cultivar-group) cDNA... 161 1e-036
dbj|AP004039.3| Oryza sativa (japonica cultivar-group) geno... 161 1e-036
gb|AACV01003607.1| Oryza sativa (japonica cultivar-group) c... 161 1e-036
ref|XM_464629.1| Oryza sativa (japonica cultivar-group), mRNA 161 1e-036
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 161 1e-036
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 161 1e-036
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 161 1e-036
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 161 1e-036
gb|AU172672.1|AU172672 AU172672 Rice panicle at flowering s... 157 2e-035
gb|CV733041.1|CV733041 FLO--07-M13.b1 Rice flower lambda ph... 147 2e-032
gb|C73240.1|C73240 C73240 Rice panicle at flowering stage O... 113 2e-022
dbj|AK071525.1| Oryza sativa (japonica cultivar-group) cDNA... 111 8e-022
dbj|AP003204.3| Oryza sativa (japonica cultivar-group) geno... 111 8e-022
gb|AACV01001142.1| Oryza sativa (japonica cultivar-group) c... 111 8e-022
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 111 8e-022
ref|NM_193876.1| Oryza sativa (japonica cultivar-group), p... 111 8e-022
ref|NT_079947.2| Oryza sativa (japonica cultivar-group) 111 8e-022
gb|CH401165.1| Oryza sativa (japonica cultivar-group) chrom... 111 8e-022
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 111 8e-022
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 111 8e-022
dbj|AP005708.1| Oryza sativa (japonica cultivar-group) chro... 109 3e-021
dbj|AK072583.1| Oryza sativa (japonica cultivar-group) cDNA... 109 3e-021
ref|NT_107232.1| Oryza sativa (japonica cultivar-group) 109 3e-021
dbj|AP003724.2| Oryza sativa (japonica cultivar-group) geno... 109 3e-021
gb|CZ444110.1|CZ444110 UCDRdSpm486_3.1 UCD RdSpm Rice Inser... 105 5e-020
gb|AACV01014424.1| Oryza sativa (japonica cultivar-group) c... 101 8e-019
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 101 8e-019
gb|CB674402.1|CB674402 OSJNEe09G23.r OSJNEe Oryza sativa (j... 90 3e-015
gb|CV723992.1|CV723992 root--05-H13.g1 Rice root lambda pha... 90 3e-015
dbj|AK063330.1| Oryza sativa (japonica cultivar-group) cDNA... 90 3e-015
dbj|AP005649.3| Oryza sativa (japonica cultivar-group) geno... 90 3e-015
gb|AACV01003332.1| Oryza sativa (japonica cultivar-group) c... 90 3e-015
ref|XM_464125.1| Oryza sativa (japonica cultivar-group), mRNA 90 3e-015
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 90 3e-015
gb|AQ865437.1|AQ865437 nbeb0025I06f CUGI Rice BAC Library (... 82 8e-013
gb|AQ862064.1|AQ862064 nbeb0018O13f CUGI Rice BAC Library (... 64 2e-007
gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A0... 62 7e-007
gb|AC025905.3| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
gb|AACV01021719.1| Oryza sativa (japonica cultivar-group) c... 62 7e-007
ref|NM_196827.1| Oryza sativa (japonica cultivar-group) put... 62 7e-007
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 62 7e-007
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 62 7e-007
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
gb|AACV01014423.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
dbj|AK064563.1| Oryza sativa (japonica cultivar-group) cDNA... 58 1e-005
gb|AC124142.2| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|AACV01010873.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 58 1e-005
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
gb|CB659556.1|CB659556 OSJNEc16K08.f OSJNEc Oryza sativa (j... 46 0.042
gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 ... 46 0.042
gb|AC145384.2| Oryza sativa chromosome 3 BAC OSJNBa0060M17 ... 46 0.042
dbj|AP005541.3| Oryza sativa (japonica cultivar-group) geno... 46 0.042
gb|AACV01008134.1| Oryza sativa (japonica cultivar-group) c... 46 0.042
gb|AACV01017899.1| Oryza sativa (japonica cultivar-group) c... 46 0.042
ref|XM_470041.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.042
ref|XM_473862.1| Oryza sativa (japonica cultivar-group), p... 46 0.042
ref|XM_481288.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.042
ref|NT_079866.2| Oryza sativa (japonica cultivar-group) 46 0.042
ref|NT_107188.1| Oryza sativa (japonica cultivar-group) 46 0.042
dbj|AP004696.3| Oryza sativa (japonica cultivar-group) geno... 46 0.042
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 46 0.042
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.042
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.042
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.042
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.042
emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromoso... 46 0.042
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 46 0.042
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 46 0.042
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 46 0.042
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.042
dbj|AB156340.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.16
dbj|AK066636.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.16
gb|AACV01001496.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
gb|AACV01008547.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
gb|AACV01010416.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
ref|NM_193350.1| Oryza sativa (japonica cultivar-group), p... 44 0.16
ref|XM_471234.1| Oryza sativa (japonica cultivar-group), p... 44 0.16
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 44 0.16
ref|NT_107194.1| Oryza sativa (japonica cultivar-group) 44 0.16
dbj|AP004231.3| Oryza sativa (japonica cultivar-group) geno... 44 0.16
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
gb|CH401184.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromoso... 44 0.16
emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromoso... 44 0.16
emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromoso... 44 0.16
>dbj|AK070509.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054E18, full
insert sequence
Length = 1870
Score = 351 bits (177), Expect = 5e-094
Identities = 378/445 (84%)
Strand = Plus / Minus
Query: 387 tggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactggttga 446
||||||||||||||||||||| || |||| |||||||||| |||||||||||| |||||
Sbjct: 1468 tggcctggatgaggtcgagccggttgtaccggcgctcgttccggccgccggactcgttga 1409
Query: 447 agaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtactcgc 506
||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||
Sbjct: 1408 agaaggcgccgttgaggaagaggtcgtcctgcgacttccacacccactccttgtactcgt 1349
Query: 507 tgtactgcgtgtactcccgcttggtcacctccttgaacctgctgtcgtcgacggcgcgga 566
||| ||||||||||| ||||||||||||||||| | | |||||||| || | ||
Sbjct: 1348 cgtagctcgtgtactccctcttggtcacctccttgagcttcatgtcgtcgcttgccctga 1289
Query: 567 agcggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagcc 626
| | ||| |||||||||||||| || |||||| | ||||||||||||||||||||||||
Sbjct: 1288 acctgttcccctggctgatgatcgtcgggttcatgttgccgccgatggcgtacatgagcc 1229
Query: 627 agtgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgct 686
|||||||||||||||||||||||| ||||||||| || | ||| | |||||||| ||
Sbjct: 1228 agtgcgtgtagtcgttgttcaccatgtggaagaatccaaacctgcacctcggcatcctct 1169
Query: 687 gcaccagccccttgccgaagtggttgaaggcgacggtgacctgcatctccctgtccttgg 746
|||| ||||||||||| ||||||||||| || | || |||||||| | ||||||| |
Sbjct: 1168 gcacgagccccttgccaaagtggttgaatgccagcgttacctgcatgatcttgtccttcg 1109
Query: 747 acgcggcgtcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttgg 806
|| | |||||| || ||||||||||| ||||| |||||| | ||||||||| |||||
Sbjct: 1108 gcgagtcgtcgcgtgcaccgaacagcatcacgtgatcgtgcttggtgaagtgggagttgg 1049
Query: 807 agacggtgatggcggtggagccgtc 831
||| |||||||||||||||||||||
Sbjct: 1048 agatggtgatggcggtggagccgtc 1024
Score = 157 bits (79), Expect = 2e-035
Identities = 208/251 (82%)
Strand = Plus / Minus
Query: 865 catggacaggtggtcgatccagatatcgctggaccccatcacggagacgccgtcgccgtc 924
|||||| | ||||||||||||||| | |||||| ||||| ||||||| ||||||||||||
Sbjct: 990 catggagacgtggtcgatccagatgttgctggagcccatgacggagatgccgtcgccgtc 931
Query: 925 gctctccccgcgcacgccccagtggtgctgcgagtcccggatcgcgccgccgccgtgcgc 984
|||||| ||||| | ||| |||||||| ||||| ||||| ||||||| | |||
Sbjct: 930 gctctcgccgcggatgccgaagtggtgcatggagtcgcggatgaggccgccggagcgcgg 871
Query: 985 cgcggcgtcgtggacgtgcaggttgtggaggatcacgttgcgcacgttctgcagcgtgat 1044
| ||| || ||||| ||| |||||||||| ||| ||||||| ||| ||||| ||||||
Sbjct: 870 cacggagttgtggatgtggaggttgtggatgatgacgttgctcaccgcctgcaccgtgat 811
Query: 1045 ctgcgcgcccacgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcac 1104
||||||||| || |||||||||||| ||||| ||||||||||||||||||||| | ||
Sbjct: 810 ctgcgcgccggtgacgtgcacctgcgcgccgcggccgtcgatggtcttgtcgctggtgac 751
Query: 1105 gatgagctcct 1115
|||||||||||
Sbjct: 750 gatgagctcct 740
>gb|AACV01013018.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013018, whole
genome shotgun sequence
Length = 32067
Score = 301 bits (152), Expect = 4e-079
Identities = 284/328 (86%)
Strand = Plus / Minus
Query: 387 tggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactggttga 446
||||||||||||||||||||| || |||| |||||||||| |||||||||||| |||||
Sbjct: 7995 tggcctggatgaggtcgagccggttgtaccggcgctcgttccggccgccggactcgttga 7936
Query: 447 agaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtactcgc 506
||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||
Sbjct: 7935 agaaggcgccgttgaggaagaggtcgtcctgcgacttccacacccactccttgtactcgt 7876
Query: 507 tgtactgcgtgtactcccgcttggtcacctccttgaacctgctgtcgtcgacggcgcgga 566
||| ||||||||||| ||||||||||||||||| | | |||||||| || | ||
Sbjct: 7875 cgtagctcgtgtactccctcttggtcacctccttgagcttcatgtcgtcgcttgccctga 7816
Query: 567 agcggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagcc 626
| | ||| |||||||||||||| || |||||| | ||||||||||||||||||||||||
Sbjct: 7815 acctgttcccctggctgatgatcgtcgggttcatgttgccgccgatggcgtacatgagcc 7756
Query: 627 agtgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgct 686
|||||||||||||||||||||||| ||||||||| || | ||| | |||||||| ||
Sbjct: 7755 agtgcgtgtagtcgttgttcaccatgtggaagaatccaaacctgcacctcggcatcctct 7696
Query: 687 gcaccagccccttgccgaagtggttgaa 714
|||| ||||||||||| |||||||||||
Sbjct: 7695 gcacgagccccttgccaaagtggttgaa 7668
Score = 170 bits (86), Expect = 1e-039
Identities = 185/218 (84%)
Strand = Plus / Minus
Query: 324 tgccgacgcggcagttgagcgcgccggcgtacctggtgagcgactcggcgtactggccgc 383
|||||||| |||||||||||| ||||||| || |||||||| || |||||| ||||
Sbjct: 12713 tgccgacgtggcagttgagcgtgccggcgaacttggtgagctggccgacgtacttgccgt 12654
Query: 384 ccttggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactggt 443
|||||| |||||| ||||||| |||||| |||||||||||||||||||||||| ||
Sbjct: 12653 gcttggcagggatgaagtcgagctggtcgtagctgcgctcgttctggccgccggactcgt 12594
Query: 444 tgaagaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtact 503
| |||||||||||||| | | || |||| ||||||||||||||||||| | ||||||||
Sbjct: 12593 taaagaaggcgccgttcatcatcacgtcgccctgcgacttccacacccactccttgtact 12534
Query: 504 cgctgtactgcgtgtactcccgcttggtcacctccttg 541
|| |||| |||||||||||| ||||||||||||||||
Sbjct: 12533 cgtcgtacggcgtgtactccctcttggtcacctccttg 12496
Score = 157 bits (79), Expect = 2e-035
Identities = 208/251 (82%)
Strand = Plus / Minus
Query: 865 catggacaggtggtcgatccagatatcgctggaccccatcacggagacgccgtcgccgtc 924
|||||| | ||||||||||||||| | |||||| ||||| ||||||| ||||||||||||
Sbjct: 7429 catggagacgtggtcgatccagatgttgctggagcccatgacggagatgccgtcgccgtc 7370
Query: 925 gctctccccgcgcacgccccagtggtgctgcgagtcccggatcgcgccgccgccgtgcgc 984
|||||| ||||| | ||| |||||||| ||||| ||||| ||||||| | |||
Sbjct: 7369 gctctcgccgcggatgccgaagtggtgcatggagtcgcggatgaggccgccggagcgcgg 7310
Query: 985 cgcggcgtcgtggacgtgcaggttgtggaggatcacgttgcgcacgttctgcagcgtgat 1044
| ||| || ||||| ||| |||||||||| ||| ||||||| ||| ||||| ||||||
Sbjct: 7309 cacggagttgtggatgtggaggttgtggatgatgacgttgctcaccgcctgcaccgtgat 7250
Query: 1045 ctgcgcgcccacgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcac 1104
||||||||| || |||||||||||| ||||| ||||||||||||||||||||| | ||
Sbjct: 7249 ctgcgcgccggtgacgtgcacctgcgcgccgcggccgtcgatggtcttgtcgctggtgac 7190
Query: 1105 gatgagctcct 1115
|||||||||||
Sbjct: 7189 gatgagctcct 7179
Score = 139 bits (70), Expect = 4e-030
Identities = 334/422 (79%)
Strand = Plus / Minus
Query: 695 cccttgccgaagtggttgaaggcgacggtgacctgcatctccctgtccttggacgcggcg 754
|||||||||||||||||||| || ||||||| ||||||| || ||||| || || |
Sbjct: 12253 cccttgccgaagtggttgaacgccacggtgatctgcatcacctcgtcctgggcgtcgctg 12194
Query: 755 tcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggagacggtg 814
| |||||| ||||| ||||| |||||||||||| | ||||||||||||||||||| ||||
Sbjct: 12193 ttgctggcgccgaagagcatgacgtggtcgtgcttggtgaagtggccgttggagatggtg 12134
Query: 815 atggcggtggagccgtccaccgcgtccaccagcccgtccgcgcagctgctcatggacagg 874
||||||||||||||| || ||||| | || ||||| | |||| || |||||| | |
Sbjct: 12133 atggcggtggagccgctgacggcgtcgatgaggccgtcggagcagttggacatggagacg 12074
Query: 875 tggtcgatccagatatcgctggaccccatcacggagacgccgtcgccgtcgctctccccg 934
|||||||||||||| | | ||| ||| | ||||| ||||||||||||||| | |
Sbjct: 12073 tggtcgatccagatgttggaggaggacatgatggagatgccgtcgccgtcgctgcgcgtg 12014
Query: 935 cgcacgccccagtggtgctgcgagtcccggatcgcgccgccgccgtgcgccgcggcgtcg 994
|| | ||| ||||| ||| ||||| |||||| |||||||||||||| | | | || |
Sbjct: 12013 cggaggccgtagtggcgcttggagtcgcggatcatgccgccgccgtgcggcaccgagtgg 11954
Query: 995 tggacgtgcaggttgtggaggatcacgttgcgcacgttctgcagcgtgatctgcgcgccc 1054
|||| ||| | |||||||| |||||| | | ||| ||| ||||||||||| |||||
Sbjct: 11953 tggatgtggacgttgtggatgatcacatgctggacgccctggagcgtgatctgggcgccg 11894
Query: 1055 acgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcc 1114
||||||||||||||| || || |||||||||||||||| | | ||||||| ||||||
Sbjct: 11893 gtgatgtgcacctgcgcgccacggccgtcgatggtcttgttgtggttcacgatcagctcc 11834
Query: 1115 tg 1116
||
Sbjct: 11833 tg 11832
Score = 107 bits (54), Expect = 1e-020
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || |||||| | |||| |||||||||||||||||||||||||||
Sbjct: 12462 ccctggctgatgatcgtcgggttcatgttgccaccgatggcgtacatgagccagtgcgtg 12403
Query: 635 tagtcgttgttcaccacgtggaagaa 660
||||||||||| || |||||||||||
Sbjct: 12402 tagtcgttgttgacgacgtggaagaa 12377
Score = 63.9 bits (32), Expect = 2e-007
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 776 acgtggtcgtgcctcgtgaagtggccgttggagacggtgatggcggtggagccgtc 831
||||| |||||| | ||||||||| |||||||| |||||||||||||||||||||
Sbjct: 7518 acgtgatcgtgcttggtgaagtgggagttggagatggtgatggcggtggagccgtc 7463
>dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0007O20
Length = 147363
Score = 301 bits (152), Expect = 4e-079
Identities = 284/328 (86%)
Strand = Plus / Minus
Query: 387 tggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactggttga 446
||||||||||||||||||||| || |||| |||||||||| |||||||||||| |||||
Sbjct: 95337 tggcctggatgaggtcgagccggttgtaccggcgctcgttccggccgccggactcgttga 95278
Query: 447 agaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtactcgc 506
||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||
Sbjct: 95277 agaaggcgccgttgaggaagaggtcgtcctgcgacttccacacccactccttgtactcgt 95218
Query: 507 tgtactgcgtgtactcccgcttggtcacctccttgaacctgctgtcgtcgacggcgcgga 566
||| ||||||||||| ||||||||||||||||| | | |||||||| || | ||
Sbjct: 95217 cgtagctcgtgtactccctcttggtcacctccttgagcttcatgtcgtcgcttgccctga 95158
Query: 567 agcggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagcc 626
| | ||| |||||||||||||| || |||||| | ||||||||||||||||||||||||
Sbjct: 95157 acctgttcccctggctgatgatcgtcgggttcatgttgccgccgatggcgtacatgagcc 95098
Query: 627 agtgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgct 686
|||||||||||||||||||||||| ||||||||| || | ||| | |||||||| ||
Sbjct: 95097 agtgcgtgtagtcgttgttcaccatgtggaagaatccaaacctgcacctcggcatcctct 95038
Query: 687 gcaccagccccttgccgaagtggttgaa 714
|||| ||||||||||| |||||||||||
Sbjct: 95037 gcacgagccccttgccaaagtggttgaa 95010
Score = 170 bits (86), Expect = 1e-039
Identities = 185/218 (84%)
Strand = Plus / Minus
Query: 324 tgccgacgcggcagttgagcgcgccggcgtacctggtgagcgactcggcgtactggccgc 383
|||||||| |||||||||||| ||||||| || |||||||| || |||||| ||||
Sbjct: 100055 tgccgacgtggcagttgagcgtgccggcgaacttggtgagctggccgacgtacttgccgt 99996
Query: 384 ccttggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactggt 443
|||||| |||||| ||||||| |||||| |||||||||||||||||||||||| ||
Sbjct: 99995 gcttggcagggatgaagtcgagctggtcgtagctgcgctcgttctggccgccggactcgt 99936
Query: 444 tgaagaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtact 503
| |||||||||||||| | | || |||| ||||||||||||||||||| | ||||||||
Sbjct: 99935 taaagaaggcgccgttcatcatcacgtcgccctgcgacttccacacccactccttgtact 99876
Query: 504 cgctgtactgcgtgtactcccgcttggtcacctccttg 541
|| |||| |||||||||||| ||||||||||||||||
Sbjct: 99875 cgtcgtacggcgtgtactccctcttggtcacctccttg 99838
Score = 170 bits (86), Expect = 1e-039
Identities = 185/218 (84%)
Strand = Plus / Plus
Query: 324 tgccgacgcggcagttgagcgcgccggcgtacctggtgagcgactcggcgtactggccgc 383
|||||||| |||||||||||| ||||||| || |||||||| || |||||| ||||
Sbjct: 57389 tgccgacgtggcagttgagcgtgccggcgaacttggtgagctggccgacgtacttgccgt 57448
Query: 384 ccttggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactggt 443
|||||| |||||| ||||||| |||||| |||||||||||||||||||||||| ||
Sbjct: 57449 gcttggcagggatgaagtcgagctggtcgtagctgcgctcgttctggccgccggactcgt 57508
Query: 444 tgaagaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtact 503
| |||||||||||||| | | || |||| ||||||||||||||||||| | ||||||||
Sbjct: 57509 taaagaaggcgccgttcatcatcacgtcgccctgcgacttccacacccactccttgtact 57568
Query: 504 cgctgtactgcgtgtactcccgcttggtcacctccttg 541
|| |||| |||||||||||| ||||||||||||||||
Sbjct: 57569 cgtcgtacggcgtgtactccctcttggtcacctccttg 57606
Score = 157 bits (79), Expect = 2e-035
Identities = 208/251 (82%)
Strand = Plus / Minus
Query: 865 catggacaggtggtcgatccagatatcgctggaccccatcacggagacgccgtcgccgtc 924
|||||| | ||||||||||||||| | |||||| ||||| ||||||| ||||||||||||
Sbjct: 94771 catggagacgtggtcgatccagatgttgctggagcccatgacggagatgccgtcgccgtc 94712
Query: 925 gctctccccgcgcacgccccagtggtgctgcgagtcccggatcgcgccgccgccgtgcgc 984
|||||| ||||| | ||| |||||||| ||||| ||||| ||||||| | |||
Sbjct: 94711 gctctcgccgcggatgccgaagtggtgcatggagtcgcggatgaggccgccggagcgcgg 94652
Query: 985 cgcggcgtcgtggacgtgcaggttgtggaggatcacgttgcgcacgttctgcagcgtgat 1044
| ||| || ||||| ||| |||||||||| ||| ||||||| ||| ||||| ||||||
Sbjct: 94651 cacggagttgtggatgtggaggttgtggatgatgacgttgctcaccgcctgcaccgtgat 94592
Query: 1045 ctgcgcgcccacgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcac 1104
||||||||| || |||||||||||| ||||| ||||||||||||||||||||| | ||
Sbjct: 94591 ctgcgcgccggtgacgtgcacctgcgcgccgcggccgtcgatggtcttgtcgctggtgac 94532
Query: 1105 gatgagctcct 1115
|||||||||||
Sbjct: 94531 gatgagctcct 94521
Score = 139 bits (70), Expect = 4e-030
Identities = 334/422 (79%)
Strand = Plus / Minus
Query: 695 cccttgccgaagtggttgaaggcgacggtgacctgcatctccctgtccttggacgcggcg 754
|||||||||||||||||||| || ||||||| ||||||| || ||||| || || |
Sbjct: 99595 cccttgccgaagtggttgaacgccacggtgatctgcatcacctcgtcctgggcgtcgctg 99536
Query: 755 tcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggagacggtg 814
| |||||| ||||| ||||| |||||||||||| | ||||||||||||||||||| ||||
Sbjct: 99535 ttgctggcgccgaagagcatgacgtggtcgtgcttggtgaagtggccgttggagatggtg 99476
Query: 815 atggcggtggagccgtccaccgcgtccaccagcccgtccgcgcagctgctcatggacagg 874
||||||||||||||| || ||||| | || ||||| | |||| || |||||| | |
Sbjct: 99475 atggcggtggagccgctgacggcgtcgatgaggccgtcggagcagttggacatggagacg 99416
Query: 875 tggtcgatccagatatcgctggaccccatcacggagacgccgtcgccgtcgctctccccg 934
|||||||||||||| | | ||| ||| | ||||| ||||||||||||||| | |
Sbjct: 99415 tggtcgatccagatgttggaggaggacatgatggagatgccgtcgccgtcgctgcgcgtg 99356
Query: 935 cgcacgccccagtggtgctgcgagtcccggatcgcgccgccgccgtgcgccgcggcgtcg 994
|| | ||| ||||| ||| ||||| |||||| |||||||||||||| | | | || |
Sbjct: 99355 cggaggccgtagtggcgcttggagtcgcggatcatgccgccgccgtgcggcaccgagtgg 99296
Query: 995 tggacgtgcaggttgtggaggatcacgttgcgcacgttctgcagcgtgatctgcgcgccc 1054
|||| ||| | |||||||| |||||| | | ||| ||| ||||||||||| |||||
Sbjct: 99295 tggatgtggacgttgtggatgatcacatgctggacgccctggagcgtgatctgggcgccg 99236
Query: 1055 acgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcc 1114
||||||||||||||| || || |||||||||||||||| | | ||||||| ||||||
Sbjct: 99235 gtgatgtgcacctgcgcgccacggccgtcgatggtcttgttgtggttcacgatcagctcc 99176
Query: 1115 tg 1116
||
Sbjct: 99175 tg 99174
Score = 139 bits (70), Expect = 4e-030
Identities = 334/422 (79%)
Strand = Plus / Plus
Query: 695 cccttgccgaagtggttgaaggcgacggtgacctgcatctccctgtccttggacgcggcg 754
|||||||||||||||||||| || ||||||| ||||||| || ||||| || || |
Sbjct: 57849 cccttgccgaagtggttgaacgccacggtgatctgcatcacctcgtcctgggcgtcgctg 57908
Query: 755 tcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggagacggtg 814
| |||||| ||||| ||||| |||||||||||| | ||||||||||||||||||| ||||
Sbjct: 57909 ttgctggcgccgaagagcatgacgtggtcgtgcttggtgaagtggccgttggagatggtg 57968
Query: 815 atggcggtggagccgtccaccgcgtccaccagcccgtccgcgcagctgctcatggacagg 874
||||||||||||||| || ||||| | || ||||| | |||| || |||||| | |
Sbjct: 57969 atggcggtggagccgctgacggcgtcgatgaggccgtcggagcagttggacatggagacg 58028
Query: 875 tggtcgatccagatatcgctggaccccatcacggagacgccgtcgccgtcgctctccccg 934
|||||||||||||| | | ||| ||| | ||||| ||||||||||||||| | |
Sbjct: 58029 tggtcgatccagatgttggaggaggacatgatggagatgccgtcgccgtcgctgcgcgtg 58088
Query: 935 cgcacgccccagtggtgctgcgagtcccggatcgcgccgccgccgtgcgccgcggcgtcg 994
|| | ||| ||||| ||| ||||| |||||| |||||||||||||| | | | || |
Sbjct: 58089 cggaggccgtagtggcgcttggagtcgcggatcatgccgccgccgtgcggcaccgagtgg 58148
Query: 995 tggacgtgcaggttgtggaggatcacgttgcgcacgttctgcagcgtgatctgcgcgccc 1054
|||| ||| | |||||||| |||||| | | ||| ||| ||||||||||| |||||
Sbjct: 58149 tggatgtggacgttgtggatgatcacatgctggacgccctggagcgtgatctgggcgccg 58208
Query: 1055 acgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcc 1114
||||||||||||||| || || |||||||||||||||| | | ||||||| ||||||
Sbjct: 58209 gtgatgtgcacctgcgcgccacggccgtcgatggtcttgttgtggttcacgatcagctcc 58268
Query: 1115 tg 1116
||
Sbjct: 58269 tg 58270
Score = 107 bits (54), Expect = 1e-020
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || |||||| | |||| |||||||||||||||||||||||||||
Sbjct: 99804 ccctggctgatgatcgtcgggttcatgttgccaccgatggcgtacatgagccagtgcgtg 99745
Query: 635 tagtcgttgttcaccacgtggaagaa 660
||||||||||| || |||||||||||
Sbjct: 99744 tagtcgttgttgacgacgtggaagaa 99719
Score = 107 bits (54), Expect = 1e-020
Identities = 78/86 (90%)
Strand = Plus / Plus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || |||||| | |||| |||||||||||||||||||||||||||
Sbjct: 57640 ccctggctgatgatcgtcgggttcatgttgccaccgatggcgtacatgagccagtgcgtg 57699
Query: 635 tagtcgttgttcaccacgtggaagaa 660
||||||||||| || |||||||||||
Sbjct: 57700 tagtcgttgttgacgacgtggaagaa 57725
Score = 63.9 bits (32), Expect = 2e-007
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 776 acgtggtcgtgcctcgtgaagtggccgttggagacggtgatggcggtggagccgtc 831
||||| |||||| | ||||||||| |||||||| |||||||||||||||||||||
Sbjct: 94860 acgtgatcgtgcttggtgaagtgggagttggagatggtgatggcggtggagccgtc 94805
>dbj|AP003767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0036F10
Length = 149415
Score = 301 bits (152), Expect = 4e-079
Identities = 284/328 (86%)
Strand = Plus / Minus
Query: 387 tggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactggttga 446
||||||||||||||||||||| || |||| |||||||||| |||||||||||| |||||
Sbjct: 4994 tggcctggatgaggtcgagccggttgtaccggcgctcgttccggccgccggactcgttga 4935
Query: 447 agaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtactcgc 506
||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||
Sbjct: 4934 agaaggcgccgttgaggaagaggtcgtcctgcgacttccacacccactccttgtactcgt 4875
Query: 507 tgtactgcgtgtactcccgcttggtcacctccttgaacctgctgtcgtcgacggcgcgga 566
||| ||||||||||| ||||||||||||||||| | | |||||||| || | ||
Sbjct: 4874 cgtagctcgtgtactccctcttggtcacctccttgagcttcatgtcgtcgcttgccctga 4815
Query: 567 agcggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagcc 626
| | ||| |||||||||||||| || |||||| | ||||||||||||||||||||||||
Sbjct: 4814 acctgttcccctggctgatgatcgtcgggttcatgttgccgccgatggcgtacatgagcc 4755
Query: 627 agtgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgct 686
|||||||||||||||||||||||| ||||||||| || | ||| | |||||||| ||
Sbjct: 4754 agtgcgtgtagtcgttgttcaccatgtggaagaatccaaacctgcacctcggcatcctct 4695
Query: 687 gcaccagccccttgccgaagtggttgaa 714
|||| ||||||||||| |||||||||||
Sbjct: 4694 gcacgagccccttgccaaagtggttgaa 4667
Score = 170 bits (86), Expect = 1e-039
Identities = 185/218 (84%)
Strand = Plus / Minus
Query: 324 tgccgacgcggcagttgagcgcgccggcgtacctggtgagcgactcggcgtactggccgc 383
|||||||| |||||||||||| ||||||| || |||||||| || |||||| ||||
Sbjct: 9712 tgccgacgtggcagttgagcgtgccggcgaacttggtgagctggccgacgtacttgccgt 9653
Query: 384 ccttggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactggt 443
|||||| |||||| ||||||| |||||| |||||||||||||||||||||||| ||
Sbjct: 9652 gcttggcagggatgaagtcgagctggtcgtagctgcgctcgttctggccgccggactcgt 9593
Query: 444 tgaagaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtact 503
| |||||||||||||| | | || |||| ||||||||||||||||||| | ||||||||
Sbjct: 9592 taaagaaggcgccgttcatcatcacgtcgccctgcgacttccacacccactccttgtact 9533
Query: 504 cgctgtactgcgtgtactcccgcttggtcacctccttg 541
|| |||| |||||||||||| ||||||||||||||||
Sbjct: 9532 cgtcgtacggcgtgtactccctcttggtcacctccttg 9495
Score = 157 bits (79), Expect = 2e-035
Identities = 208/251 (82%)
Strand = Plus / Minus
Query: 865 catggacaggtggtcgatccagatatcgctggaccccatcacggagacgccgtcgccgtc 924
|||||| | ||||||||||||||| | |||||| ||||| ||||||| ||||||||||||
Sbjct: 4428 catggagacgtggtcgatccagatgttgctggagcccatgacggagatgccgtcgccgtc 4369
Query: 925 gctctccccgcgcacgccccagtggtgctgcgagtcccggatcgcgccgccgccgtgcgc 984
|||||| ||||| | ||| |||||||| ||||| ||||| ||||||| | |||
Sbjct: 4368 gctctcgccgcggatgccgaagtggtgcatggagtcgcggatgaggccgccggagcgcgg 4309
Query: 985 cgcggcgtcgtggacgtgcaggttgtggaggatcacgttgcgcacgttctgcagcgtgat 1044
| ||| || ||||| ||| |||||||||| ||| ||||||| ||| ||||| ||||||
Sbjct: 4308 cacggagttgtggatgtggaggttgtggatgatgacgttgctcaccgcctgcaccgtgat 4249
Query: 1045 ctgcgcgcccacgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcac 1104
||||||||| || |||||||||||| ||||| ||||||||||||||||||||| | ||
Sbjct: 4248 ctgcgcgccggtgacgtgcacctgcgcgccgcggccgtcgatggtcttgtcgctggtgac 4189
Query: 1105 gatgagctcct 1115
|||||||||||
Sbjct: 4188 gatgagctcct 4178
Score = 139 bits (70), Expect = 4e-030
Identities = 334/422 (79%)
Strand = Plus / Minus
Query: 695 cccttgccgaagtggttgaaggcgacggtgacctgcatctccctgtccttggacgcggcg 754
|||||||||||||||||||| || ||||||| ||||||| || ||||| || || |
Sbjct: 9252 cccttgccgaagtggttgaacgccacggtgatctgcatcacctcgtcctgggcgtcgctg 9193
Query: 755 tcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggagacggtg 814
| |||||| ||||| ||||| |||||||||||| | ||||||||||||||||||| ||||
Sbjct: 9192 ttgctggcgccgaagagcatgacgtggtcgtgcttggtgaagtggccgttggagatggtg 9133
Query: 815 atggcggtggagccgtccaccgcgtccaccagcccgtccgcgcagctgctcatggacagg 874
||||||||||||||| || ||||| | || ||||| | |||| || |||||| | |
Sbjct: 9132 atggcggtggagccgctgacggcgtcgatgaggccgtcggagcagttggacatggagacg 9073
Query: 875 tggtcgatccagatatcgctggaccccatcacggagacgccgtcgccgtcgctctccccg 934
|||||||||||||| | | ||| ||| | ||||| ||||||||||||||| | |
Sbjct: 9072 tggtcgatccagatgttggaggaggacatgatggagatgccgtcgccgtcgctgcgcgtg 9013
Query: 935 cgcacgccccagtggtgctgcgagtcccggatcgcgccgccgccgtgcgccgcggcgtcg 994
|| | ||| ||||| ||| ||||| |||||| |||||||||||||| | | | || |
Sbjct: 9012 cggaggccgtagtggcgcttggagtcgcggatcatgccgccgccgtgcggcaccgagtgg 8953
Query: 995 tggacgtgcaggttgtggaggatcacgttgcgcacgttctgcagcgtgatctgcgcgccc 1054
|||| ||| | |||||||| |||||| | | ||| ||| ||||||||||| |||||
Sbjct: 8952 tggatgtggacgttgtggatgatcacatgctggacgccctggagcgtgatctgggcgccg 8893
Query: 1055 acgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcc 1114
||||||||||||||| || || |||||||||||||||| | | ||||||| ||||||
Sbjct: 8892 gtgatgtgcacctgcgcgccacggccgtcgatggtcttgttgtggttcacgatcagctcc 8833
Query: 1115 tg 1116
||
Sbjct: 8832 tg 8831
Score = 107 bits (54), Expect = 1e-020
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || |||||| | |||| |||||||||||||||||||||||||||
Sbjct: 9461 ccctggctgatgatcgtcgggttcatgttgccaccgatggcgtacatgagccagtgcgtg 9402
Query: 635 tagtcgttgttcaccacgtggaagaa 660
||||||||||| || |||||||||||
Sbjct: 9401 tagtcgttgttgacgacgtggaagaa 9376
Score = 63.9 bits (32), Expect = 2e-007
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 776 acgtggtcgtgcctcgtgaagtggccgttggagacggtgatggcggtggagccgtc 831
||||| |||||| | ||||||||| |||||||| |||||||||||||||||||||
Sbjct: 4517 acgtgatcgtgcttggtgaagtgggagttggagatggtgatggcggtggagccgtc 4462
>ref|NT_107230.2| Oryza sativa (japonica cultivar-group)
Length = 2805126
Score = 301 bits (152), Expect = 4e-079
Identities = 284/328 (86%)
Strand = Plus / Minus
Query: 387 tggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactggttga 446
||||||||||||||||||||| || |||| |||||||||| |||||||||||| |||||
Sbjct: 2337113 tggcctggatgaggtcgagccggttgtaccggcgctcgttccggccgccggactcgttga 2337054
Query: 447 agaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtactcgc 506
||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||
Sbjct: 2337053 agaaggcgccgttgaggaagaggtcgtcctgcgacttccacacccactccttgtactcgt 2336994
Query: 507 tgtactgcgtgtactcccgcttggtcacctccttgaacctgctgtcgtcgacggcgcgga 566
||| ||||||||||| ||||||||||||||||| | | |||||||| || | ||
Sbjct: 2336993 cgtagctcgtgtactccctcttggtcacctccttgagcttcatgtcgtcgcttgccctga 2336934
Query: 567 agcggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagcc 626
| | ||| |||||||||||||| || |||||| | ||||||||||||||||||||||||
Sbjct: 2336933 acctgttcccctggctgatgatcgtcgggttcatgttgccgccgatggcgtacatgagcc 2336874
Query: 627 agtgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgct 686
|||||||||||||||||||||||| ||||||||| || | ||| | |||||||| ||
Sbjct: 2336873 agtgcgtgtagtcgttgttcaccatgtggaagaatccaaacctgcacctcggcatcctct 2336814
Query: 687 gcaccagccccttgccgaagtggttgaa 714
|||| ||||||||||| |||||||||||
Sbjct: 2336813 gcacgagccccttgccaaagtggttgaa 2336786
Score = 170 bits (86), Expect = 1e-039
Identities = 185/218 (84%)
Strand = Plus / Minus
Query: 324 tgccgacgcggcagttgagcgcgccggcgtacctggtgagcgactcggcgtactggccgc 383
|||||||| |||||||||||| ||||||| || |||||||| || |||||| ||||
Sbjct: 2341831 tgccgacgtggcagttgagcgtgccggcgaacttggtgagctggccgacgtacttgccgt 2341772
Query: 384 ccttggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactggt 443
|||||| |||||| ||||||| |||||| |||||||||||||||||||||||| ||
Sbjct: 2341771 gcttggcagggatgaagtcgagctggtcgtagctgcgctcgttctggccgccggactcgt 2341712
Query: 444 tgaagaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtact 503
| |||||||||||||| | | || |||| ||||||||||||||||||| | ||||||||
Sbjct: 2341711 taaagaaggcgccgttcatcatcacgtcgccctgcgacttccacacccactccttgtact 2341652
Query: 504 cgctgtactgcgtgtactcccgcttggtcacctccttg 541
|| |||| |||||||||||| ||||||||||||||||
Sbjct: 2341651 cgtcgtacggcgtgtactccctcttggtcacctccttg 2341614
Score = 170 bits (86), Expect = 1e-039
Identities = 185/218 (84%)
Strand = Plus / Plus
Query: 324 tgccgacgcggcagttgagcgcgccggcgtacctggtgagcgactcggcgtactggccgc 383
|||||||| |||||||||||| ||||||| || |||||||| || |||||| ||||
Sbjct: 2299165 tgccgacgtggcagttgagcgtgccggcgaacttggtgagctggccgacgtacttgccgt 2299224
Query: 384 ccttggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactggt 443
|||||| |||||| ||||||| |||||| |||||||||||||||||||||||| ||
Sbjct: 2299225 gcttggcagggatgaagtcgagctggtcgtagctgcgctcgttctggccgccggactcgt 2299284
Query: 444 tgaagaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtact 503
| |||||||||||||| | | || |||| ||||||||||||||||||| | ||||||||
Sbjct: 2299285 taaagaaggcgccgttcatcatcacgtcgccctgcgacttccacacccactccttgtact 2299344
Query: 504 cgctgtactgcgtgtactcccgcttggtcacctccttg 541
|| |||| |||||||||||| ||||||||||||||||
Sbjct: 2299345 cgtcgtacggcgtgtactccctcttggtcacctccttg 2299382
Score = 157 bits (79), Expect = 2e-035
Identities = 208/251 (82%)
Strand = Plus / Minus
Query: 865 catggacaggtggtcgatccagatatcgctggaccccatcacggagacgccgtcgccgtc 924
|||||| | ||||||||||||||| | |||||| ||||| ||||||| ||||||||||||
Sbjct: 2336547 catggagacgtggtcgatccagatgttgctggagcccatgacggagatgccgtcgccgtc 2336488
Query: 925 gctctccccgcgcacgccccagtggtgctgcgagtcccggatcgcgccgccgccgtgcgc 984
|||||| ||||| | ||| |||||||| ||||| ||||| ||||||| | |||
Sbjct: 2336487 gctctcgccgcggatgccgaagtggtgcatggagtcgcggatgaggccgccggagcgcgg 2336428
Query: 985 cgcggcgtcgtggacgtgcaggttgtggaggatcacgttgcgcacgttctgcagcgtgat 1044
| ||| || ||||| ||| |||||||||| ||| ||||||| ||| ||||| ||||||
Sbjct: 2336427 cacggagttgtggatgtggaggttgtggatgatgacgttgctcaccgcctgcaccgtgat 2336368
Query: 1045 ctgcgcgcccacgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcac 1104
||||||||| || |||||||||||| ||||| ||||||||||||||||||||| | ||
Sbjct: 2336367 ctgcgcgccggtgacgtgcacctgcgcgccgcggccgtcgatggtcttgtcgctggtgac 2336308
Query: 1105 gatgagctcct 1115
|||||||||||
Sbjct: 2336307 gatgagctcct 2336297
Score = 139 bits (70), Expect = 4e-030
Identities = 334/422 (79%)
Strand = Plus / Minus
Query: 695 cccttgccgaagtggttgaaggcgacggtgacctgcatctccctgtccttggacgcggcg 754
|||||||||||||||||||| || ||||||| ||||||| || ||||| || || |
Sbjct: 2341371 cccttgccgaagtggttgaacgccacggtgatctgcatcacctcgtcctgggcgtcgctg 2341312
Query: 755 tcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggagacggtg 814
| |||||| ||||| ||||| |||||||||||| | ||||||||||||||||||| ||||
Sbjct: 2341311 ttgctggcgccgaagagcatgacgtggtcgtgcttggtgaagtggccgttggagatggtg 2341252
Query: 815 atggcggtggagccgtccaccgcgtccaccagcccgtccgcgcagctgctcatggacagg 874
||||||||||||||| || ||||| | || ||||| | |||| || |||||| | |
Sbjct: 2341251 atggcggtggagccgctgacggcgtcgatgaggccgtcggagcagttggacatggagacg 2341192
Query: 875 tggtcgatccagatatcgctggaccccatcacggagacgccgtcgccgtcgctctccccg 934
|||||||||||||| | | ||| ||| | ||||| ||||||||||||||| | |
Sbjct: 2341191 tggtcgatccagatgttggaggaggacatgatggagatgccgtcgccgtcgctgcgcgtg 2341132
Query: 935 cgcacgccccagtggtgctgcgagtcccggatcgcgccgccgccgtgcgccgcggcgtcg 994
|| | ||| ||||| ||| ||||| |||||| |||||||||||||| | | | || |
Sbjct: 2341131 cggaggccgtagtggcgcttggagtcgcggatcatgccgccgccgtgcggcaccgagtgg 2341072
Query: 995 tggacgtgcaggttgtggaggatcacgttgcgcacgttctgcagcgtgatctgcgcgccc 1054
|||| ||| | |||||||| |||||| | | ||| ||| ||||||||||| |||||
Sbjct: 2341071 tggatgtggacgttgtggatgatcacatgctggacgccctggagcgtgatctgggcgccg 2341012
Query: 1055 acgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcc 1114
||||||||||||||| || || |||||||||||||||| | | ||||||| ||||||
Sbjct: 2341011 gtgatgtgcacctgcgcgccacggccgtcgatggtcttgttgtggttcacgatcagctcc 2340952
Query: 1115 tg 1116
||
Sbjct: 2340951 tg 2340950
Score = 139 bits (70), Expect = 4e-030
Identities = 334/422 (79%)
Strand = Plus / Plus
Query: 695 cccttgccgaagtggttgaaggcgacggtgacctgcatctccctgtccttggacgcggcg 754
|||||||||||||||||||| || ||||||| ||||||| || ||||| || || |
Sbjct: 2299625 cccttgccgaagtggttgaacgccacggtgatctgcatcacctcgtcctgggcgtcgctg 2299684
Query: 755 tcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggagacggtg 814
| |||||| ||||| ||||| |||||||||||| | ||||||||||||||||||| ||||
Sbjct: 2299685 ttgctggcgccgaagagcatgacgtggtcgtgcttggtgaagtggccgttggagatggtg 2299744
Query: 815 atggcggtggagccgtccaccgcgtccaccagcccgtccgcgcagctgctcatggacagg 874
||||||||||||||| || ||||| | || ||||| | |||| || |||||| | |
Sbjct: 2299745 atggcggtggagccgctgacggcgtcgatgaggccgtcggagcagttggacatggagacg 2299804
Query: 875 tggtcgatccagatatcgctggaccccatcacggagacgccgtcgccgtcgctctccccg 934
|||||||||||||| | | ||| ||| | ||||| ||||||||||||||| | |
Sbjct: 2299805 tggtcgatccagatgttggaggaggacatgatggagatgccgtcgccgtcgctgcgcgtg 2299864
Query: 935 cgcacgccccagtggtgctgcgagtcccggatcgcgccgccgccgtgcgccgcggcgtcg 994
|| | ||| ||||| ||| ||||| |||||| |||||||||||||| | | | || |
Sbjct: 2299865 cggaggccgtagtggcgcttggagtcgcggatcatgccgccgccgtgcggcaccgagtgg 2299924
Query: 995 tggacgtgcaggttgtggaggatcacgttgcgcacgttctgcagcgtgatctgcgcgccc 1054
|||| ||| | |||||||| |||||| | | ||| ||| ||||||||||| |||||
Sbjct: 2299925 tggatgtggacgttgtggatgatcacatgctggacgccctggagcgtgatctgggcgccg 2299984
Query: 1055 acgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcc 1114
||||||||||||||| || || |||||||||||||||| | | ||||||| ||||||
Sbjct: 2299985 gtgatgtgcacctgcgcgccacggccgtcgatggtcttgttgtggttcacgatcagctcc 2300044
Query: 1115 tg 1116
||
Sbjct: 2300045 tg 2300046
Score = 107 bits (54), Expect = 1e-020
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || |||||| | |||| |||||||||||||||||||||||||||
Sbjct: 2341580 ccctggctgatgatcgtcgggttcatgttgccaccgatggcgtacatgagccagtgcgtg 2341521
Query: 635 tagtcgttgttcaccacgtggaagaa 660
||||||||||| || |||||||||||
Sbjct: 2341520 tagtcgttgttgacgacgtggaagaa 2341495
Score = 107 bits (54), Expect = 1e-020
Identities = 78/86 (90%)
Strand = Plus / Plus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || |||||| | |||| |||||||||||||||||||||||||||
Sbjct: 2299416 ccctggctgatgatcgtcgggttcatgttgccaccgatggcgtacatgagccagtgcgtg 2299475
Query: 635 tagtcgttgttcaccacgtggaagaa 660
||||||||||| || |||||||||||
Sbjct: 2299476 tagtcgttgttgacgacgtggaagaa 2299501
Score = 63.9 bits (32), Expect = 2e-007
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 776 acgtggtcgtgcctcgtgaagtggccgttggagacggtgatggcggtggagccgtc 831
||||| |||||| | ||||||||| |||||||| |||||||||||||||||||||
Sbjct: 2336636 acgtgatcgtgcttggtgaagtgggagttggagatggtgatggcggtggagccgtc 2336581
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046 genomic
scaffold, whole genome shotgun sequence
Length = 8607552
Score = 301 bits (152), Expect = 4e-079
Identities = 284/328 (86%)
Strand = Plus / Plus
Query: 387 tggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactggttga 446
||||||||||||||||||||| || |||| |||||||||| |||||||||||| |||||
Sbjct: 2290174 tggcctggatgaggtcgagccggttgtaccggcgctcgttccggccgccggactcgttga 2290233
Query: 447 agaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtactcgc 506
||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||
Sbjct: 2290234 agaaggcgccgttgaggaagaggtcgtcctgcgacttccacacccactccttgtactcgt 2290293
Query: 507 tgtactgcgtgtactcccgcttggtcacctccttgaacctgctgtcgtcgacggcgcgga 566
||| ||||||||||| ||||||||||||||||| | | |||||||| || | ||
Sbjct: 2290294 cgtagctcgtgtactccctcttggtcacctccttgagcttcatgtcgtcgcttgccctga 2290353
Query: 567 agcggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagcc 626
| | ||| |||||||||||||| || |||||| | ||||||||||||||||||||||||
Sbjct: 2290354 acctgttcccctggctgatgatcgtcgggttcatgttgccgccgatggcgtacatgagcc 2290413
Query: 627 agtgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgct 686
|||||||||||||||||||||||| ||||||||| || | ||| | |||||||| ||
Sbjct: 2290414 agtgcgtgtagtcgttgttcaccatgtggaagaatccaaacctgcacctcggcatcctct 2290473
Query: 687 gcaccagccccttgccgaagtggttgaa 714
|||| ||||||||||| |||||||||||
Sbjct: 2290474 gcacgagccccttgccaaagtggttgaa 2290501
Score = 170 bits (86), Expect = 1e-039
Identities = 185/218 (84%)
Strand = Plus / Minus
Query: 324 tgccgacgcggcagttgagcgcgccggcgtacctggtgagcgactcggcgtactggccgc 383
|||||||| |||||||||||| ||||||| || |||||||| || |||||| ||||
Sbjct: 2324483 tgccgacgtggcagttgagcgtgccggcgaacttggtgagctggccgacgtacttgccgt 2324424
Query: 384 ccttggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactggt 443
|||||| |||||| ||||||| |||||| |||||||||||||||||||||||| ||
Sbjct: 2324423 gcttggcagggatgaagtcgagctggtcgtagctgcgctcgttctggccgccggactcgt 2324364
Query: 444 tgaagaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtact 503
| |||||||||||||| | | || |||| ||||||||||||||||||| | ||||||||
Sbjct: 2324363 taaagaaggcgccgttcatcatcacgtcgccctgcgacttccacacccactccttgtact 2324304
Query: 504 cgctgtactgcgtgtactcccgcttggtcacctccttg 541
|| |||| |||||||||||| ||||||||||||||||
Sbjct: 2324303 cgtcgtacggcgtgtactccctcttggtcacctccttg 2324266
Score = 170 bits (86), Expect = 1e-039
Identities = 185/218 (84%)
Strand = Plus / Plus
Query: 324 tgccgacgcggcagttgagcgcgccggcgtacctggtgagcgactcggcgtactggccgc 383
|||||||| |||||||||||| ||||||| || |||||||| || |||||| ||||
Sbjct: 2285456 tgccgacgtggcagttgagcgtgccggcgaacttggtgagctggccgacgtacttgccgt 2285515
Query: 384 ccttggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactggt 443
|||||| |||||| ||||||| |||||| |||||||||||||||||||||||| ||
Sbjct: 2285516 gcttggcagggatgaagtcgagctggtcgtagctgcgctcgttctggccgccggactcgt 2285575
Query: 444 tgaagaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtact 503
| |||||||||||||| | | || |||| ||||||||||||||||||| | ||||||||
Sbjct: 2285576 taaagaaggcgccgttcatcatcacgtcgccctgcgacttccacacccactccttgtact 2285635
Query: 504 cgctgtactgcgtgtactcccgcttggtcacctccttg 541
|| |||| |||||||||||| ||||||||||||||||
Sbjct: 2285636 cgtcgtacggcgtgtactccctcttggtcacctccttg 2285673
Score = 157 bits (79), Expect = 2e-035
Identities = 208/251 (82%)
Strand = Plus / Plus
Query: 865 catggacaggtggtcgatccagatatcgctggaccccatcacggagacgccgtcgccgtc 924
|||||| | ||||||||||||||| | |||||| ||||| ||||||| ||||||||||||
Sbjct: 2290740 catggagacgtggtcgatccagatgttgctggagcccatgacggagatgccgtcgccgtc 2290799
Query: 925 gctctccccgcgcacgccccagtggtgctgcgagtcccggatcgcgccgccgccgtgcgc 984
|||||| ||||| | ||| |||||||| ||||| ||||| ||||||| | |||
Sbjct: 2290800 gctctcgccgcggatgccgaagtggtgcatggagtcgcggatgaggccgccggagcgcgg 2290859
Query: 985 cgcggcgtcgtggacgtgcaggttgtggaggatcacgttgcgcacgttctgcagcgtgat 1044
| ||| || ||||| ||| |||||||||| ||| ||||||| ||| ||||| ||||||
Sbjct: 2290860 cacggagttgtggatgtggaggttgtggatgatgacgttgctcaccgcctgcaccgtgat 2290919
Query: 1045 ctgcgcgcccacgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcac 1104
||||||||| || |||||||||||| ||||| ||||||||||||||||||||| | ||
Sbjct: 2290920 ctgcgcgccggtgacgtgcacctgcgcgccgcggccgtcgatggtcttgtcgctggtgac 2290979
Query: 1105 gatgagctcct 1115
|||||||||||
Sbjct: 2290980 gatgagctcct 2290990
Score = 139 bits (70), Expect = 4e-030
Identities = 334/422 (79%)
Strand = Plus / Plus
Query: 695 cccttgccgaagtggttgaaggcgacggtgacctgcatctccctgtccttggacgcggcg 754
|||||||||||||||||||| || ||||||| ||||||| || ||||| || || |
Sbjct: 2285916 cccttgccgaagtggttgaacgccacggtgatctgcatcacctcgtcctgggcgtcgctg 2285975
Query: 755 tcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggagacggtg 814
| |||||| ||||| ||||| |||||||||||| | ||||||||||||||||||| ||||
Sbjct: 2285976 ttgctggcgccgaagagcatgacgtggtcgtgcttggtgaagtggccgttggagatggtg 2286035
Query: 815 atggcggtggagccgtccaccgcgtccaccagcccgtccgcgcagctgctcatggacagg 874
||||||||||||||| || ||||| | || ||||| | |||| || |||||| | |
Sbjct: 2286036 atggcggtggagccgctgacggcgtcgatgaggccgtcggagcagttggacatggagacg 2286095
Query: 875 tggtcgatccagatatcgctggaccccatcacggagacgccgtcgccgtcgctctccccg 934
|||||||||||||| | | ||| ||| | ||||| ||||||||||||||| | |
Sbjct: 2286096 tggtcgatccagatgttggaggaggacatgatggagatgccgtcgccgtcgctgcgcgtg 2286155
Query: 935 cgcacgccccagtggtgctgcgagtcccggatcgcgccgccgccgtgcgccgcggcgtcg 994
|| | ||| ||||| ||| ||||| |||||| |||||||||||||| | | | || |
Sbjct: 2286156 cggaggccgtagtggcgcttggagtcgcggatcatgccgccgccgtgcggcaccgagtgg 2286215
Query: 995 tggacgtgcaggttgtggaggatcacgttgcgcacgttctgcagcgtgatctgcgcgccc 1054
|||| ||| | |||||||| |||||| | | ||| ||| ||||||||||| |||||
Sbjct: 2286216 tggatgtggacgttgtggatgatcacatgctggacgccctggagcgtgatctgggcgccg 2286275
Query: 1055 acgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcc 1114
||||||||||||||| || || |||||||||||||||| | | ||||||| ||||||
Sbjct: 2286276 gtgatgtgcacctgcgcgccacggccgtcgatggtcttgttgtggttcacgatcagctcc 2286335
Query: 1115 tg 1116
||
Sbjct: 2286336 tg 2286337
Score = 109 bits (55), Expect = 3e-021
Identities = 115/135 (85%)
Strand = Plus / Minus
Query: 695 cccttgccgaagtggttgaaggcgacggtgacctgcatctccctgtccttggacgcggcg 754
|||||||||||||||||||| || ||||||| ||||||| || ||||| || || |
Sbjct: 2324023 cccttgccgaagtggttgaacgccacggtgatctgcatcacctcgtcctgggcgtcgctg 2323964
Query: 755 tcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggagacggtg 814
| |||||| ||||| ||||| |||||||||||| | ||||||||||| ||||||| ||||
Sbjct: 2323963 ttgctggcgccgaagagcatgacgtggtcgtgcttggtgaagtggcctttggagatggtg 2323904
Query: 815 atggcggtggagccg 829
|||||||||||||||
Sbjct: 2323903 atggcggtggagccg 2323889
Score = 107 bits (54), Expect = 1e-020
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || |||||| | |||| |||||||||||||||||||||||||||
Sbjct: 2324232 ccctggctgatgatcgtcgggttcatgttgccaccgatggcgtacatgagccagtgcgtg 2324173
Query: 635 tagtcgttgttcaccacgtggaagaa 660
||||||||||| || |||||||||||
Sbjct: 2324172 tagtcgttgttgacgacgtggaagaa 2324147
Score = 107 bits (54), Expect = 1e-020
Identities = 78/86 (90%)
Strand = Plus / Plus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || |||||| | |||| |||||||||||||||||||||||||||
Sbjct: 2285707 ccctggctgatgatcgtcgggttcatgttgccaccgatggcgtacatgagccagtgcgtg 2285766
Query: 635 tagtcgttgttcaccacgtggaagaa 660
||||||||||| || |||||||||||
Sbjct: 2285767 tagtcgttgttgacgacgtggaagaa 2285792
Score = 63.9 bits (32), Expect = 2e-007
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 776 acgtggtcgtgcctcgtgaagtggccgttggagacggtgatggcggtggagccgtc 831
||||| |||||| | ||||||||| |||||||| |||||||||||||||||||||
Sbjct: 2290651 acgtgatcgtgcttggtgaagtgggagttggagatggtgatggcggtggagccgtc 2290706
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 301 bits (152), Expect = 4e-079
Identities = 284/328 (86%)
Strand = Plus / Plus
Query: 387 tggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactggttga 446
||||||||||||||||||||| || |||| |||||||||| |||||||||||| |||||
Sbjct: 2290174 tggcctggatgaggtcgagccggttgtaccggcgctcgttccggccgccggactcgttga 2290233
Query: 447 agaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtactcgc 506
||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||
Sbjct: 2290234 agaaggcgccgttgaggaagaggtcgtcctgcgacttccacacccactccttgtactcgt 2290293
Query: 507 tgtactgcgtgtactcccgcttggtcacctccttgaacctgctgtcgtcgacggcgcgga 566
||| ||||||||||| ||||||||||||||||| | | |||||||| || | ||
Sbjct: 2290294 cgtagctcgtgtactccctcttggtcacctccttgagcttcatgtcgtcgcttgccctga 2290353
Query: 567 agcggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagcc 626
| | ||| |||||||||||||| || |||||| | ||||||||||||||||||||||||
Sbjct: 2290354 acctgttcccctggctgatgatcgtcgggttcatgttgccgccgatggcgtacatgagcc 2290413
Query: 627 agtgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgct 686
|||||||||||||||||||||||| ||||||||| || | ||| | |||||||| ||
Sbjct: 2290414 agtgcgtgtagtcgttgttcaccatgtggaagaatccaaacctgcacctcggcatcctct 2290473
Query: 687 gcaccagccccttgccgaagtggttgaa 714
|||| ||||||||||| |||||||||||
Sbjct: 2290474 gcacgagccccttgccaaagtggttgaa 2290501
Score = 170 bits (86), Expect = 1e-039
Identities = 185/218 (84%)
Strand = Plus / Minus
Query: 324 tgccgacgcggcagttgagcgcgccggcgtacctggtgagcgactcggcgtactggccgc 383
|||||||| |||||||||||| ||||||| || |||||||| || |||||| ||||
Sbjct: 2324483 tgccgacgtggcagttgagcgtgccggcgaacttggtgagctggccgacgtacttgccgt 2324424
Query: 384 ccttggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactggt 443
|||||| |||||| ||||||| |||||| |||||||||||||||||||||||| ||
Sbjct: 2324423 gcttggcagggatgaagtcgagctggtcgtagctgcgctcgttctggccgccggactcgt 2324364
Query: 444 tgaagaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtact 503
| |||||||||||||| | | || |||| ||||||||||||||||||| | ||||||||
Sbjct: 2324363 taaagaaggcgccgttcatcatcacgtcgccctgcgacttccacacccactccttgtact 2324304
Query: 504 cgctgtactgcgtgtactcccgcttggtcacctccttg 541
|| |||| |||||||||||| ||||||||||||||||
Sbjct: 2324303 cgtcgtacggcgtgtactccctcttggtcacctccttg 2324266
Score = 170 bits (86), Expect = 1e-039
Identities = 185/218 (84%)
Strand = Plus / Plus
Query: 324 tgccgacgcggcagttgagcgcgccggcgtacctggtgagcgactcggcgtactggccgc 383
|||||||| |||||||||||| ||||||| || |||||||| || |||||| ||||
Sbjct: 2285456 tgccgacgtggcagttgagcgtgccggcgaacttggtgagctggccgacgtacttgccgt 2285515
Query: 384 ccttggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactggt 443
|||||| |||||| ||||||| |||||| |||||||||||||||||||||||| ||
Sbjct: 2285516 gcttggcagggatgaagtcgagctggtcgtagctgcgctcgttctggccgccggactcgt 2285575
Query: 444 tgaagaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtact 503
| |||||||||||||| | | || |||| ||||||||||||||||||| | ||||||||
Sbjct: 2285576 taaagaaggcgccgttcatcatcacgtcgccctgcgacttccacacccactccttgtact 2285635
Query: 504 cgctgtactgcgtgtactcccgcttggtcacctccttg 541
|| |||| |||||||||||| ||||||||||||||||
Sbjct: 2285636 cgtcgtacggcgtgtactccctcttggtcacctccttg 2285673
Score = 157 bits (79), Expect = 2e-035
Identities = 208/251 (82%)
Strand = Plus / Plus
Query: 865 catggacaggtggtcgatccagatatcgctggaccccatcacggagacgccgtcgccgtc 924
|||||| | ||||||||||||||| | |||||| ||||| ||||||| ||||||||||||
Sbjct: 2290740 catggagacgtggtcgatccagatgttgctggagcccatgacggagatgccgtcgccgtc 2290799
Query: 925 gctctccccgcgcacgccccagtggtgctgcgagtcccggatcgcgccgccgccgtgcgc 984
|||||| ||||| | ||| |||||||| ||||| ||||| ||||||| | |||
Sbjct: 2290800 gctctcgccgcggatgccgaagtggtgcatggagtcgcggatgaggccgccggagcgcgg 2290859
Query: 985 cgcggcgtcgtggacgtgcaggttgtggaggatcacgttgcgcacgttctgcagcgtgat 1044
| ||| || ||||| ||| |||||||||| ||| ||||||| ||| ||||| ||||||
Sbjct: 2290860 cacggagttgtggatgtggaggttgtggatgatgacgttgctcaccgcctgcaccgtgat 2290919
Query: 1045 ctgcgcgcccacgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcac 1104
||||||||| || |||||||||||| ||||| ||||||||||||||||||||| | ||
Sbjct: 2290920 ctgcgcgccggtgacgtgcacctgcgcgccgcggccgtcgatggtcttgtcgctggtgac 2290979
Query: 1105 gatgagctcct 1115
|||||||||||
Sbjct: 2290980 gatgagctcct 2290990
Score = 139 bits (70), Expect = 4e-030
Identities = 334/422 (79%)
Strand = Plus / Plus
Query: 695 cccttgccgaagtggttgaaggcgacggtgacctgcatctccctgtccttggacgcggcg 754
|||||||||||||||||||| || ||||||| ||||||| || ||||| || || |
Sbjct: 2285916 cccttgccgaagtggttgaacgccacggtgatctgcatcacctcgtcctgggcgtcgctg 2285975
Query: 755 tcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggagacggtg 814
| |||||| ||||| ||||| |||||||||||| | ||||||||||||||||||| ||||
Sbjct: 2285976 ttgctggcgccgaagagcatgacgtggtcgtgcttggtgaagtggccgttggagatggtg 2286035
Query: 815 atggcggtggagccgtccaccgcgtccaccagcccgtccgcgcagctgctcatggacagg 874
||||||||||||||| || ||||| | || ||||| | |||| || |||||| | |
Sbjct: 2286036 atggcggtggagccgctgacggcgtcgatgaggccgtcggagcagttggacatggagacg 2286095
Query: 875 tggtcgatccagatatcgctggaccccatcacggagacgccgtcgccgtcgctctccccg 934
|||||||||||||| | | ||| ||| | ||||| ||||||||||||||| | |
Sbjct: 2286096 tggtcgatccagatgttggaggaggacatgatggagatgccgtcgccgtcgctgcgcgtg 2286155
Query: 935 cgcacgccccagtggtgctgcgagtcccggatcgcgccgccgccgtgcgccgcggcgtcg 994
|| | ||| ||||| ||| ||||| |||||| |||||||||||||| | | | || |
Sbjct: 2286156 cggaggccgtagtggcgcttggagtcgcggatcatgccgccgccgtgcggcaccgagtgg 2286215
Query: 995 tggacgtgcaggttgtggaggatcacgttgcgcacgttctgcagcgtgatctgcgcgccc 1054
|||| ||| | |||||||| |||||| | | ||| ||| ||||||||||| |||||
Sbjct: 2286216 tggatgtggacgttgtggatgatcacatgctggacgccctggagcgtgatctgggcgccg 2286275
Query: 1055 acgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcc 1114
||||||||||||||| || || |||||||||||||||| | | ||||||| ||||||
Sbjct: 2286276 gtgatgtgcacctgcgcgccacggccgtcgatggtcttgttgtggttcacgatcagctcc 2286335
Query: 1115 tg 1116
||
Sbjct: 2286336 tg 2286337
Score = 109 bits (55), Expect = 3e-021
Identities = 115/135 (85%)
Strand = Plus / Minus
Query: 695 cccttgccgaagtggttgaaggcgacggtgacctgcatctccctgtccttggacgcggcg 754
|||||||||||||||||||| || ||||||| ||||||| || ||||| || || |
Sbjct: 2324023 cccttgccgaagtggttgaacgccacggtgatctgcatcacctcgtcctgggcgtcgctg 2323964
Query: 755 tcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggagacggtg 814
| |||||| ||||| ||||| |||||||||||| | ||||||||||| ||||||| ||||
Sbjct: 2323963 ttgctggcgccgaagagcatgacgtggtcgtgcttggtgaagtggcctttggagatggtg 2323904
Query: 815 atggcggtggagccg 829
|||||||||||||||
Sbjct: 2323903 atggcggtggagccg 2323889
Score = 107 bits (54), Expect = 1e-020
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || |||||| | |||| |||||||||||||||||||||||||||
Sbjct: 2324232 ccctggctgatgatcgtcgggttcatgttgccaccgatggcgtacatgagccagtgcgtg 2324173
Query: 635 tagtcgttgttcaccacgtggaagaa 660
||||||||||| || |||||||||||
Sbjct: 2324172 tagtcgttgttgacgacgtggaagaa 2324147
Score = 107 bits (54), Expect = 1e-020
Identities = 78/86 (90%)
Strand = Plus / Plus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || |||||| | |||| |||||||||||||||||||||||||||
Sbjct: 2285707 ccctggctgatgatcgtcgggttcatgttgccaccgatggcgtacatgagccagtgcgtg 2285766
Query: 635 tagtcgttgttcaccacgtggaagaa 660
||||||||||| || |||||||||||
Sbjct: 2285767 tagtcgttgttgacgacgtggaagaa 2285792
Score = 101 bits (51), Expect = 8e-019
Identities = 75/83 (90%)
Strand = Plus / Minus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || || ||| ||| || |||||||| ||||||||||||||||||
Sbjct: 21522405 ccctggctgatgatcgtcggtttcttgctccctccgatggcatacatgagccagtgcgtg 21522346
Query: 635 tagtcgttgttcaccacgtggaa 657
|||||||||||||||||||||||
Sbjct: 21522345 tagtcgttgttcaccacgtggaa 21522323
Score = 97.6 bits (49), Expect = 1e-017
Identities = 79/89 (88%)
Strand = Plus / Minus
Query: 569 cggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccag 628
||||| |||||||| ||||| || |||||| ||| || |||||||||||||| ||||||
Sbjct: 21525826 cggttcccctggctaatgatcgtcgggttcttgctccctccgatggcgtacatcagccag 21525767
Query: 629 tgcgtgtagtcgttgttcaccacgtggaa 657
||||||||||| |||||||||||||||||
Sbjct: 21525766 tgcgtgtagtcattgttcaccacgtggaa 21525738
Score = 63.9 bits (32), Expect = 2e-007
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 776 acgtggtcgtgcctcgtgaagtggccgttggagacggtgatggcggtggagccgtc 831
||||| |||||| | ||||||||| |||||||| |||||||||||||||||||||
Sbjct: 2290651 acgtgatcgtgcttggtgaagtgggagttggagatggtgatggcggtggagccgtc 2290706
Score = 60.0 bits (30), Expect = 3e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 1062 gcacctgcgctccgcgcccgtcgatggtcttgtcgctg 1099
||||||||||||| ||||||||||| ||||||||||||
Sbjct: 21520868 gcacctgcgctccccgcccgtcgatcgtcttgtcgctg 21520831
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 700 gccgaagtggttgaaggcgacggtgacctgcat 732
||||||||||||||| |||||||||| ||||||
Sbjct: 21521233 gccgaagtggttgaaagcgacggtgatctgcat 21521201
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 301 bits (152), Expect = 4e-079
Identities = 284/328 (86%)
Strand = Plus / Minus
Query: 387 tggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactggttga 446
||||||||||||||||||||| || |||| |||||||||| |||||||||||| |||||
Sbjct: 2373536 tggcctggatgaggtcgagccggttgtaccggcgctcgttccggccgccggactcgttga 2373477
Query: 447 agaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtactcgc 506
||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||
Sbjct: 2373476 agaaggcgccgttgaggaagaggtcgtcctgcgacttccacacccactccttgtactcgt 2373417
Query: 507 tgtactgcgtgtactcccgcttggtcacctccttgaacctgctgtcgtcgacggcgcgga 566
||| ||||||||||| ||||||||||||||||| | | |||||||| || | ||
Sbjct: 2373416 cgtagctcgtgtactccctcttggtcacctccttgagcttcatgtcgtcgcttgccctga 2373357
Query: 567 agcggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagcc 626
| | ||| |||||||||||||| || |||||| | ||||||||||||||||||||||||
Sbjct: 2373356 acctgttcccctggctgatgatcgtcgggttcatgttgccgccgatggcgtacatgagcc 2373297
Query: 627 agtgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgct 686
|||||||||||||||||||||||| ||||||||| || | ||| | |||||||| ||
Sbjct: 2373296 agtgcgtgtagtcgttgttcaccatgtggaagaatccaaacctgcacctcggcatcctct 2373237
Query: 687 gcaccagccccttgccgaagtggttgaa 714
|||| ||||||||||| |||||||||||
Sbjct: 2373236 gcacgagccccttgccaaagtggttgaa 2373209
Score = 170 bits (86), Expect = 1e-039
Identities = 185/218 (84%)
Strand = Plus / Minus
Query: 324 tgccgacgcggcagttgagcgcgccggcgtacctggtgagcgactcggcgtactggccgc 383
|||||||| |||||||||||| ||||||| || |||||||| || |||||| ||||
Sbjct: 2378254 tgccgacgtggcagttgagcgtgccggcgaacttggtgagctggccgacgtacttgccgt 2378195
Query: 384 ccttggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactggt 443
|||||| |||||| ||||||| |||||| |||||||||||||||||||||||| ||
Sbjct: 2378194 gcttggcagggatgaagtcgagctggtcgtagctgcgctcgttctggccgccggactcgt 2378135
Query: 444 tgaagaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtact 503
| |||||||||||||| | | || |||| ||||||||||||||||||| | ||||||||
Sbjct: 2378134 taaagaaggcgccgttcatcatcacgtcgccctgcgacttccacacccactccttgtact 2378075
Query: 504 cgctgtactgcgtgtactcccgcttggtcacctccttg 541
|| |||| |||||||||||| ||||||||||||||||
Sbjct: 2378074 cgtcgtacggcgtgtactccctcttggtcacctccttg 2378037
Score = 170 bits (86), Expect = 1e-039
Identities = 185/218 (84%)
Strand = Plus / Plus
Query: 324 tgccgacgcggcagttgagcgcgccggcgtacctggtgagcgactcggcgtactggccgc 383
|||||||| |||||||||||| ||||||| || |||||||| || |||||| ||||
Sbjct: 2335588 tgccgacgtggcagttgagcgtgccggcgaacttggtgagctggccgacgtacttgccgt 2335647
Query: 384 ccttggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactggt 443
|||||| |||||| ||||||| |||||| |||||||||||||||||||||||| ||
Sbjct: 2335648 gcttggcagggatgaagtcgagctggtcgtagctgcgctcgttctggccgccggactcgt 2335707
Query: 444 tgaagaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtact 503
| |||||||||||||| | | || |||| ||||||||||||||||||| | ||||||||
Sbjct: 2335708 taaagaaggcgccgttcatcatcacgtcgccctgcgacttccacacccactccttgtact 2335767
Query: 504 cgctgtactgcgtgtactcccgcttggtcacctccttg 541
|| |||| |||||||||||| ||||||||||||||||
Sbjct: 2335768 cgtcgtacggcgtgtactccctcttggtcacctccttg 2335805
Score = 157 bits (79), Expect = 2e-035
Identities = 208/251 (82%)
Strand = Plus / Minus
Query: 865 catggacaggtggtcgatccagatatcgctggaccccatcacggagacgccgtcgccgtc 924
|||||| | ||||||||||||||| | |||||| ||||| ||||||| ||||||||||||
Sbjct: 2372970 catggagacgtggtcgatccagatgttgctggagcccatgacggagatgccgtcgccgtc 2372911
Query: 925 gctctccccgcgcacgccccagtggtgctgcgagtcccggatcgcgccgccgccgtgcgc 984
|||||| ||||| | ||| |||||||| ||||| ||||| ||||||| | |||
Sbjct: 2372910 gctctcgccgcggatgccgaagtggtgcatggagtcgcggatgaggccgccggagcgcgg 2372851
Query: 985 cgcggcgtcgtggacgtgcaggttgtggaggatcacgttgcgcacgttctgcagcgtgat 1044
| ||| || ||||| ||| |||||||||| ||| ||||||| ||| ||||| ||||||
Sbjct: 2372850 cacggagttgtggatgtggaggttgtggatgatgacgttgctcaccgcctgcaccgtgat 2372791
Query: 1045 ctgcgcgcccacgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcac 1104
||||||||| || |||||||||||| ||||| ||||||||||||||||||||| | ||
Sbjct: 2372790 ctgcgcgccggtgacgtgcacctgcgcgccgcggccgtcgatggtcttgtcgctggtgac 2372731
Query: 1105 gatgagctcct 1115
|||||||||||
Sbjct: 2372730 gatgagctcct 2372720
Score = 139 bits (70), Expect = 4e-030
Identities = 334/422 (79%)
Strand = Plus / Minus
Query: 695 cccttgccgaagtggttgaaggcgacggtgacctgcatctccctgtccttggacgcggcg 754
|||||||||||||||||||| || ||||||| ||||||| || ||||| || || |
Sbjct: 2377794 cccttgccgaagtggttgaacgccacggtgatctgcatcacctcgtcctgggcgtcgctg 2377735
Query: 755 tcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggagacggtg 814
| |||||| ||||| ||||| |||||||||||| | ||||||||||||||||||| ||||
Sbjct: 2377734 ttgctggcgccgaagagcatgacgtggtcgtgcttggtgaagtggccgttggagatggtg 2377675
Query: 815 atggcggtggagccgtccaccgcgtccaccagcccgtccgcgcagctgctcatggacagg 874
||||||||||||||| || ||||| | || ||||| | |||| || |||||| | |
Sbjct: 2377674 atggcggtggagccgctgacggcgtcgatgaggccgtcggagcagttggacatggagacg 2377615
Query: 875 tggtcgatccagatatcgctggaccccatcacggagacgccgtcgccgtcgctctccccg 934
|||||||||||||| | | ||| ||| | ||||| ||||||||||||||| | |
Sbjct: 2377614 tggtcgatccagatgttggaggaggacatgatggagatgccgtcgccgtcgctgcgcgtg 2377555
Query: 935 cgcacgccccagtggtgctgcgagtcccggatcgcgccgccgccgtgcgccgcggcgtcg 994
|| | ||| ||||| ||| ||||| |||||| |||||||||||||| | | | || |
Sbjct: 2377554 cggaggccgtagtggcgcttggagtcgcggatcatgccgccgccgtgcggcaccgagtgg 2377495
Query: 995 tggacgtgcaggttgtggaggatcacgttgcgcacgttctgcagcgtgatctgcgcgccc 1054
|||| ||| | |||||||| |||||| | | ||| ||| ||||||||||| |||||
Sbjct: 2377494 tggatgtggacgttgtggatgatcacatgctggacgccctggagcgtgatctgggcgccg 2377435
Query: 1055 acgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcc 1114
||||||||||||||| || || |||||||||||||||| | | ||||||| ||||||
Sbjct: 2377434 gtgatgtgcacctgcgcgccacggccgtcgatggtcttgttgtggttcacgatcagctcc 2377375
Query: 1115 tg 1116
||
Sbjct: 2377374 tg 2377373
Score = 139 bits (70), Expect = 4e-030
Identities = 334/422 (79%)
Strand = Plus / Plus
Query: 695 cccttgccgaagtggttgaaggcgacggtgacctgcatctccctgtccttggacgcggcg 754
|||||||||||||||||||| || ||||||| ||||||| || ||||| || || |
Sbjct: 2336048 cccttgccgaagtggttgaacgccacggtgatctgcatcacctcgtcctgggcgtcgctg 2336107
Query: 755 tcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggagacggtg 814
| |||||| ||||| ||||| |||||||||||| | ||||||||||||||||||| ||||
Sbjct: 2336108 ttgctggcgccgaagagcatgacgtggtcgtgcttggtgaagtggccgttggagatggtg 2336167
Query: 815 atggcggtggagccgtccaccgcgtccaccagcccgtccgcgcagctgctcatggacagg 874
||||||||||||||| || ||||| | || ||||| | |||| || |||||| | |
Sbjct: 2336168 atggcggtggagccgctgacggcgtcgatgaggccgtcggagcagttggacatggagacg 2336227
Query: 875 tggtcgatccagatatcgctggaccccatcacggagacgccgtcgccgtcgctctccccg 934
|||||||||||||| | | ||| ||| | ||||| ||||||||||||||| | |
Sbjct: 2336228 tggtcgatccagatgttggaggaggacatgatggagatgccgtcgccgtcgctgcgcgtg 2336287
Query: 935 cgcacgccccagtggtgctgcgagtcccggatcgcgccgccgccgtgcgccgcggcgtcg 994
|| | ||| ||||| ||| ||||| |||||| |||||||||||||| | | | || |
Sbjct: 2336288 cggaggccgtagtggcgcttggagtcgcggatcatgccgccgccgtgcggcaccgagtgg 2336347
Query: 995 tggacgtgcaggttgtggaggatcacgttgcgcacgttctgcagcgtgatctgcgcgccc 1054
|||| ||| | |||||||| |||||| | | ||| ||| ||||||||||| |||||
Sbjct: 2336348 tggatgtggacgttgtggatgatcacatgctggacgccctggagcgtgatctgggcgccg 2336407
Query: 1055 acgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcc 1114
||||||||||||||| || || |||||||||||||||| | | ||||||| ||||||
Sbjct: 2336408 gtgatgtgcacctgcgcgccacggccgtcgatggtcttgttgtggttcacgatcagctcc 2336467
Query: 1115 tg 1116
||
Sbjct: 2336468 tg 2336469
Score = 109 bits (55), Expect = 3e-021
Identities = 76/83 (91%)
Strand = Plus / Minus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || |||||| ||| || |||||||| ||||||||||||||||||
Sbjct: 22474771 ccctggctgatgatcgtcgggttcttgctccctccgatggcatacatgagccagtgcgtg 22474712
Query: 635 tagtcgttgttcaccacgtggaa 657
|||||||||||||||||||||||
Sbjct: 22474711 tagtcgttgttcaccacgtggaa 22474689
Score = 107 bits (54), Expect = 1e-020
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || |||||| | |||| |||||||||||||||||||||||||||
Sbjct: 2378003 ccctggctgatgatcgtcgggttcatgttgccaccgatggcgtacatgagccagtgcgtg 2377944
Query: 635 tagtcgttgttcaccacgtggaagaa 660
||||||||||| || |||||||||||
Sbjct: 2377943 tagtcgttgttgacgacgtggaagaa 2377918
Score = 107 bits (54), Expect = 1e-020
Identities = 78/86 (90%)
Strand = Plus / Plus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || |||||| | |||| |||||||||||||||||||||||||||
Sbjct: 2335839 ccctggctgatgatcgtcgggttcatgttgccaccgatggcgtacatgagccagtgcgtg 2335898
Query: 635 tagtcgttgttcaccacgtggaagaa 660
||||||||||| || |||||||||||
Sbjct: 2335899 tagtcgttgttgacgacgtggaagaa 2335924
Score = 97.6 bits (49), Expect = 1e-017
Identities = 79/89 (88%)
Strand = Plus / Minus
Query: 569 cggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccag 628
||||| |||||||| ||||| || |||||| ||| || |||||||||||||| ||||||
Sbjct: 22478192 cggttcccctggctaatgatcgtcgggttcttgctccctccgatggcgtacatcagccag 22478133
Query: 629 tgcgtgtagtcgttgttcaccacgtggaa 657
||||||||||| |||||||||||||||||
Sbjct: 22478132 tgcgtgtagtcattgttcaccacgtggaa 22478104
Score = 63.9 bits (32), Expect = 2e-007
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 776 acgtggtcgtgcctcgtgaagtggccgttggagacggtgatggcggtggagccgtc 831
||||| |||||| | ||||||||| |||||||| |||||||||||||||||||||
Sbjct: 2373059 acgtgatcgtgcttggtgaagtgggagttggagatggtgatggcggtggagccgtc 2373004
Score = 60.0 bits (30), Expect = 3e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 1062 gcacctgcgctccgcgcccgtcgatggtcttgtcgctg 1099
||||||||||||| ||||||||||| ||||||||||||
Sbjct: 22474168 gcacctgcgctccccgcccgtcgatcgtcttgtcgctg 22474131
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 700 gccgaagtggttgaaggcgacggtgacctgcat 732
||||||||||||||| |||||||||| ||||||
Sbjct: 22474533 gccgaagtggttgaaagcgacggtgatctgcat 22474501
>gb|AACV01013020.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013020,
whole genome shotgun sequence
Length = 5783
Score = 170 bits (86), Expect = 1e-039
Identities = 185/218 (84%)
Strand = Plus / Minus
Query: 324 tgccgacgcggcagttgagcgcgccggcgtacctggtgagcgactcggcgtactggccgc 383
|||||||| |||||||||||| ||||||| || |||||||| || |||||| ||||
Sbjct: 670 tgccgacgtggcagttgagcgtgccggcgaacttggtgagctggccgacgtacttgccgt 611
Query: 384 ccttggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactggt 443
|||||| |||||| ||||||| |||||| |||||||||||||||||||||||| ||
Sbjct: 610 gcttggcagggatgaagtcgagctggtcgtagctgcgctcgttctggccgccggactcgt 551
Query: 444 tgaagaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtact 503
| |||||||||||||| | | || |||| ||||||||||||||||||| | ||||||||
Sbjct: 550 taaagaaggcgccgttcatcatcacgtcgccctgcgacttccacacccactccttgtact 491
Query: 504 cgctgtactgcgtgtactcccgcttggtcacctccttg 541
|| |||| |||||||||||| ||||||||||||||||
Sbjct: 490 cgtcgtacggcgtgtactccctcttggtcacctccttg 453
Score = 109 bits (55), Expect = 3e-021
Identities = 115/135 (85%)
Strand = Plus / Minus
Query: 695 cccttgccgaagtggttgaaggcgacggtgacctgcatctccctgtccttggacgcggcg 754
|||||||||||||||||||| || ||||||| ||||||| || ||||| || || |
Sbjct: 210 cccttgccgaagtggttgaacgccacggtgatctgcatcacctcgtcctgggcgtcgctg 151
Query: 755 tcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggagacggtg 814
| |||||| ||||| ||||| |||||||||||| | ||||||||||| ||||||| ||||
Sbjct: 150 ttgctggcgccgaagagcatgacgtggtcgtgcttggtgaagtggcctttggagatggtg 91
Query: 815 atggcggtggagccg 829
|||||||||||||||
Sbjct: 90 atggcggtggagccg 76
Score = 107 bits (54), Expect = 1e-020
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || |||||| | |||| |||||||||||||||||||||||||||
Sbjct: 419 ccctggctgatgatcgtcgggttcatgttgccaccgatggcgtacatgagccagtgcgtg 360
Query: 635 tagtcgttgttcaccacgtggaagaa 660
||||||||||| || |||||||||||
Sbjct: 359 tagtcgttgttgacgacgtggaagaa 334
>dbj|AK100191.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035P11, full
insert sequence
Length = 1659
Score = 163 bits (82), Expect = 3e-037
Identities = 184/218 (84%)
Strand = Plus / Minus
Query: 324 tgccgacgcggcagttgagcgcgccggcgtacctggtgagcgactcggcgtactggccgc 383
|||||||| |||||||||||| ||||||| || |||||||| || |||||| ||||
Sbjct: 1497 tgccgacgtggcagttgagcgtgccggcgaacttggtgagctggccgacgtacttgccgt 1438
Query: 384 ccttggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactggt 443
|||||| |||||| ||||||| |||||| |||||||||||||||||||||||| ||
Sbjct: 1437 gcttggcagggatgaagtcgagctggtcgtagctgcgctcgttctggccgccggactcgt 1378
Query: 444 tgaagaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtact 503
| | |||||||||||| | | || |||| ||||||||||||||||||| | ||||||||
Sbjct: 1377 taaggaaggcgccgttcatcatcacgtcgccctgcgacttccacacccactccttgtact 1318
Query: 504 cgctgtactgcgtgtactcccgcttggtcacctccttg 541
|| |||| |||||||||||| ||||||||||||||||
Sbjct: 1317 cgtcgtacggcgtgtactccctcttggtcacctccttg 1280
Score = 131 bits (66), Expect = 9e-028
Identities = 333/422 (78%)
Strand = Plus / Minus
Query: 695 cccttgccgaagtggttgaaggcgacggtgacctgcatctccctgtccttggacgcggcg 754
|||||||||||||||||||| || ||||||| ||||||| || ||||| || || |
Sbjct: 1135 cccttgccgaagtggttgaacgccacggtgatctgcatcacctcgtcctgggcgtcgctg 1076
Query: 755 tcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggagacggtg 814
| || ||| ||||| ||||| |||||||||||| | ||||||||||||||||||| ||||
Sbjct: 1075 ttgccggcgccgaagagcatgacgtggtcgtgcttggtgaagtggccgttggagatggtg 1016
Query: 815 atggcggtggagccgtccaccgcgtccaccagcccgtccgcgcagctgctcatggacagg 874
||||||||||||||| || ||||| | || ||||| | |||| || |||||| | |
Sbjct: 1015 atggcggtggagccgctgacggcgtcgatgaggccgtcggagcagttggacatggagacg 956
Query: 875 tggtcgatccagatatcgctggaccccatcacggagacgccgtcgccgtcgctctccccg 934
|||||||||||||| | | ||| ||| | ||||| ||||||||||||||| | |
Sbjct: 955 tggtcgatccagatgttggaggaggacatgatggagatgccgtcgccgtcgctgcgcgtg 896
Query: 935 cgcacgccccagtggtgctgcgagtcccggatcgcgccgccgccgtgcgccgcggcgtcg 994
|| | ||| ||||| ||| ||||| |||||| |||||||||||||| | | | || |
Sbjct: 895 cggaggccgtagtggcgcttggagtcgcggatcatgccgccgccgtgcggcaccgagtgg 836
Query: 995 tggacgtgcaggttgtggaggatcacgttgcgcacgttctgcagcgtgatctgcgcgccc 1054
|||| ||| | |||||||| |||||| | | ||| ||| ||||||||||| |||||
Sbjct: 835 tggatgtggacgttgtggatgatcacatgctggacgccctggagcgtgatctgggcgccg 776
Query: 1055 acgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcc 1114
||||||||||||||| || || |||||||||||||||| | | ||||||| ||||||
Sbjct: 775 gtgatgtgcacctgcgcgccacggccgtcgatggtcttgttgtggttcacgatcagctcc 716
Query: 1115 tg 1116
||
Sbjct: 715 tg 714
Score = 107 bits (54), Expect = 1e-020
Identities = 93/106 (87%)
Strand = Plus / Minus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || |||||| | |||| |||||||||||||||||||||||||||
Sbjct: 1246 ccctggctgatgatcgtcgggttcatgttgccaccgatggcgtacatgagccagtgcgtg 1187
Query: 635 tagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggca 680
||||||||||| || ||||||||||| ||| | |||||||||||
Sbjct: 1186 tagtcgttgttgacgacgtggaagaatccgaacctgcagcgcggca 1141
>dbj|AP004780.1| Oryza sativa (japonica cultivar-group) chromosome 2 clone P0542A02, ***
SEQUENCING IN PROGRESS ***
Length = 137445
Score = 161 bits (81), Expect = 1e-036
Identities = 144/165 (87%)
Strand = Plus / Minus
Query: 569 cggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccag 628
|||||||||||||||| |||||| ||| || || |||||||||||||||||||||||||
Sbjct: 126803 cggttgccctggctgaggatggtagggctcatgccgccgccgatggcgtacatgagccag 126744
Query: 629 tgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgctgc 688
||||||||||||||||| || ||||||||||| || ||||| |||||||||||||||
Sbjct: 126743 tgcgtgtagtcgttgttgacgacgtggaagaacccccaccggcatcgcggcatccgctgc 126684
Query: 689 accagccccttgccgaagtggttgaaggcgacggtgacctgcatc 733
|| ||||| ||||||||||||||| || ||||||| |||||||
Sbjct: 126683 acgagcccacggccgaagtggttgaacgccacggtgatctgcatc 126639
Score = 73.8 bits (37), Expect = 2e-010
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 1056 cgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcct 1115
|||||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||||
Sbjct: 126129 cgatgtgcacctgcgcgccgcggccgtcgatggtcttgtcgctggcgacgaggagctcct 126070
Query: 1116 g 1116
|
Sbjct: 126069 g 126069
Score = 48.1 bits (24), Expect = 0.011
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 754 gtcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggaga 809
||||||||| ||||||||||| |||| || ||| | |||||||||| ||||||||
Sbjct: 126437 gtcgctggcgccgaacagcatgacgtcgttgtggttggtgaagtggctgttggaga 126382
>dbj|AK101009.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023148H12, full
insert sequence
Length = 1825
Score = 161 bits (81), Expect = 1e-036
Identities = 201/241 (83%)
Strand = Plus / Minus
Query: 569 cggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccag 628
|||||||||||||||| |||||| ||| || || |||||||||||||||||||||||||
Sbjct: 1255 cggttgccctggctgaggatggtagggctcatgccgccgccgatggcgtacatgagccag 1196
Query: 629 tgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgctgc 688
||||||||||||||||| || ||||||||||| || ||||| |||||||||||||||
Sbjct: 1195 tgcgtgtagtcgttgttgacgacgtggaagaacccccaccggcatcgcggcatccgctgc 1136
Query: 689 accagccccttgccgaagtggttgaaggcgacggtgacctgcatctccctgtccttggac 748
|| ||||| ||||||||||||||| || ||||||| ||||||| || | |||| |
Sbjct: 1135 acgagcccacggccgaagtggttgaacgccacggtgatctgcatcaccttatcctgcggg 1076
Query: 749 gcggcgtcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggag 808
| ||||||||| ||||||||||| |||| || ||| | |||||||||| |||||||
Sbjct: 1075 tacgagtcgctggcgccgaacagcatgacgtcgttgtggttggtgaagtggctgttggag 1016
Query: 809 a 809
|
Sbjct: 1015 a 1015
Score = 73.8 bits (37), Expect = 2e-010
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 1056 cgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcct 1115
|||||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||||
Sbjct: 762 cgatgtgcacctgcgcgccgcggccgtcgatggtcttgtcgctggcgacgaggagctcct 703
Query: 1116 g 1116
|
Sbjct: 702 g 702
>dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1006_D05
Length = 128178
Score = 161 bits (81), Expect = 1e-036
Identities = 144/165 (87%)
Strand = Plus / Plus
Query: 569 cggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccag 628
|||||||||||||||| |||||| ||| || || |||||||||||||||||||||||||
Sbjct: 41497 cggttgccctggctgaggatggtagggctcatgccgccgccgatggcgtacatgagccag 41556
Query: 629 tgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgctgc 688
||||||||||||||||| || ||||||||||| || ||||| |||||||||||||||
Sbjct: 41557 tgcgtgtagtcgttgttgacgacgtggaagaacccccaccggcatcgcggcatccgctgc 41616
Query: 689 accagccccttgccgaagtggttgaaggcgacggtgacctgcatc 733
|| ||||| ||||||||||||||| || ||||||| |||||||
Sbjct: 41617 acgagcccacggccgaagtggttgaacgccacggtgatctgcatc 41661
Score = 73.8 bits (37), Expect = 2e-010
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 1056 cgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcct 1115
|||||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||||
Sbjct: 42171 cgatgtgcacctgcgcgccgcggccgtcgatggtcttgtcgctggcgacgaggagctcct 42230
Query: 1116 g 1116
|
Sbjct: 42231 g 42231
Score = 48.1 bits (24), Expect = 0.011
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 754 gtcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggaga 809
||||||||| ||||||||||| |||| || ||| | |||||||||| ||||||||
Sbjct: 41863 gtcgctggcgccgaacagcatgacgtcgttgtggttggtgaagtggctgttggaga 41918
>gb|AACV01003607.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003607, whole
genome shotgun sequence
Length = 8977
Score = 161 bits (81), Expect = 1e-036
Identities = 144/165 (87%)
Strand = Plus / Minus
Query: 569 cggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccag 628
|||||||||||||||| |||||| ||| || || |||||||||||||||||||||||||
Sbjct: 7888 cggttgccctggctgaggatggtagggctcatgccgccgccgatggcgtacatgagccag 7829
Query: 629 tgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgctgc 688
||||||||||||||||| || ||||||||||| || ||||| |||||||||||||||
Sbjct: 7828 tgcgtgtagtcgttgttgacgacgtggaagaacccccaccggcatcgcggcatccgctgc 7769
Query: 689 accagccccttgccgaagtggttgaaggcgacggtgacctgcatc 733
|| ||||| ||||||||||||||| || ||||||| |||||||
Sbjct: 7768 acgagcccacggccgaagtggttgaacgccacggtgatctgcatc 7724
Score = 73.8 bits (37), Expect = 2e-010
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 1056 cgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcct 1115
|||||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||||
Sbjct: 7214 cgatgtgcacctgcgcgccgcggccgtcgatggtcttgtcgctggcgacgaggagctcct 7155
Query: 1116 g 1116
|
Sbjct: 7154 g 7154
Score = 48.1 bits (24), Expect = 0.011
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 754 gtcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggaga 809
||||||||| ||||||||||| |||| || ||| | |||||||||| ||||||||
Sbjct: 7522 gtcgctggcgccgaacagcatgacgtcgttgtggttggtgaagtggctgttggaga 7467
>ref|XM_464629.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1825
Score = 161 bits (81), Expect = 1e-036
Identities = 201/241 (83%)
Strand = Plus / Minus
Query: 569 cggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccag 628
|||||||||||||||| |||||| ||| || || |||||||||||||||||||||||||
Sbjct: 1255 cggttgccctggctgaggatggtagggctcatgccgccgccgatggcgtacatgagccag 1196
Query: 629 tgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgctgc 688
||||||||||||||||| || ||||||||||| || ||||| |||||||||||||||
Sbjct: 1195 tgcgtgtagtcgttgttgacgacgtggaagaacccccaccggcatcgcggcatccgctgc 1136
Query: 689 accagccccttgccgaagtggttgaaggcgacggtgacctgcatctccctgtccttggac 748
|| ||||| ||||||||||||||| || ||||||| ||||||| || | |||| |
Sbjct: 1135 acgagcccacggccgaagtggttgaacgccacggtgatctgcatcaccttatcctgcggg 1076
Query: 749 gcggcgtcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggag 808
| ||||||||| ||||||||||| |||| || ||| | |||||||||| |||||||
Sbjct: 1075 tacgagtcgctggcgccgaacagcatgacgtcgttgtggttggtgaagtggctgttggag 1016
Query: 809 a 809
|
Sbjct: 1015 a 1015
Score = 73.8 bits (37), Expect = 2e-010
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 1056 cgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcct 1115
|||||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||||
Sbjct: 762 cgatgtgcacctgcgcgccgcggccgtcgatggtcttgtcgctggcgacgaggagctcct 703
Query: 1116 g 1116
|
Sbjct: 702 g 702
>ref|NT_107178.1| Oryza sativa (japonica cultivar-group)
Length = 7645238
Score = 161 bits (81), Expect = 1e-036
Identities = 144/165 (87%)
Strand = Plus / Plus
Query: 569 cggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccag 628
|||||||||||||||| |||||| ||| || || |||||||||||||||||||||||||
Sbjct: 429886 cggttgccctggctgaggatggtagggctcatgccgccgccgatggcgtacatgagccag 429945
Query: 629 tgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgctgc 688
||||||||||||||||| || ||||||||||| || ||||| |||||||||||||||
Sbjct: 429946 tgcgtgtagtcgttgttgacgacgtggaagaacccccaccggcatcgcggcatccgctgc 430005
Query: 689 accagccccttgccgaagtggttgaaggcgacggtgacctgcatc 733
|| ||||| ||||||||||||||| || ||||||| |||||||
Sbjct: 430006 acgagcccacggccgaagtggttgaacgccacggtgatctgcatc 430050
Score = 73.8 bits (37), Expect = 2e-010
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 1056 cgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcct 1115
|||||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||||
Sbjct: 430560 cgatgtgcacctgcgcgccgcggccgtcgatggtcttgtcgctggcgacgaggagctcct 430619
Query: 1116 g 1116
|
Sbjct: 430620 g 430620
Score = 48.1 bits (24), Expect = 0.011
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 754 gtcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggaga 809
||||||||| ||||||||||| |||| || ||| | |||||||||| ||||||||
Sbjct: 430252 gtcgctggcgccgaacagcatgacgtcgttgtggttggtgaagtggctgttggaga 430307
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 161 bits (81), Expect = 1e-036
Identities = 144/165 (87%)
Strand = Plus / Plus
Query: 569 cggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccag 628
|||||||||||||||| |||||| ||| || || |||||||||||||||||||||||||
Sbjct: 6517562 cggttgccctggctgaggatggtagggctcatgccgccgccgatggcgtacatgagccag 6517621
Query: 629 tgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgctgc 688
||||||||||||||||| || ||||||||||| || ||||| |||||||||||||||
Sbjct: 6517622 tgcgtgtagtcgttgttgacgacgtggaagaacccccaccggcatcgcggcatccgctgc 6517681
Query: 689 accagccccttgccgaagtggttgaaggcgacggtgacctgcatc 733
|| ||||| ||||||||||||||| || ||||||| |||||||
Sbjct: 6517682 acgagcccacggccgaagtggttgaacgccacggtgatctgcatc 6517726
Score = 89.7 bits (45), Expect = 3e-015
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaac 112
||||||||||||||||||| ||| || |||||||||||||||| |||||||| |||||
Sbjct: 2436795 agtctgtccacccatgctctgtatttcttcccttgtttgtcaccgtaacatgaccccaat 2436736
Query: 113 gcatcaatggatgcatg 129
|||||||| ||||||||
Sbjct: 2436735 gcatcaattgatgcatg 2436719
Score = 73.8 bits (37), Expect = 2e-010
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 1056 cgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcct 1115
|||||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||||
Sbjct: 6518236 cgatgtgcacctgcgcgccgcggccgtcgatggtcttgtcgctggcgacgaggagctcct 6518295
Query: 1116 g 1116
|
Sbjct: 6518296 g 6518296
Score = 48.1 bits (24), Expect = 0.011
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 754 gtcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggaga 809
||||||||| ||||||||||| |||| || ||| | |||||||||| ||||||||
Sbjct: 6517928 gtcgctggcgccgaacagcatgacgtcgttgtggttggtgaagtggctgttggaga 6517983
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 161 bits (81), Expect = 1e-036
Identities = 144/165 (87%)
Strand = Plus / Plus
Query: 569 cggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccag 628
|||||||||||||||| |||||| ||| || || |||||||||||||||||||||||||
Sbjct: 6517562 cggttgccctggctgaggatggtagggctcatgccgccgccgatggcgtacatgagccag 6517621
Query: 629 tgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgctgc 688
||||||||||||||||| || ||||||||||| || ||||| |||||||||||||||
Sbjct: 6517622 tgcgtgtagtcgttgttgacgacgtggaagaacccccaccggcatcgcggcatccgctgc 6517681
Query: 689 accagccccttgccgaagtggttgaaggcgacggtgacctgcatc 733
|| ||||| ||||||||||||||| || ||||||| |||||||
Sbjct: 6517682 acgagcccacggccgaagtggttgaacgccacggtgatctgcatc 6517726
Score = 89.7 bits (45), Expect = 3e-015
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaac 112
||||||||||||||||||| ||| || |||||||||||||||| |||||||| |||||
Sbjct: 2436795 agtctgtccacccatgctctgtatttcttcccttgtttgtcaccgtaacatgaccccaat 2436736
Query: 113 gcatcaatggatgcatg 129
|||||||| ||||||||
Sbjct: 2436735 gcatcaattgatgcatg 2436719
Score = 73.8 bits (37), Expect = 2e-010
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 1056 cgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcct 1115
|||||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||||
Sbjct: 6518236 cgatgtgcacctgcgcgccgcggccgtcgatggtcttgtcgctggcgacgaggagctcct 6518295
Query: 1116 g 1116
|
Sbjct: 6518296 g 6518296
Score = 48.1 bits (24), Expect = 0.011
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 754 gtcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggaga 809
||||||||| ||||||||||| |||| || ||| | |||||||||| ||||||||
Sbjct: 6517928 gtcgctggcgccgaacagcatgacgtcgttgtggttggtgaagtggctgttggaga 6517983
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 161 bits (81), Expect = 1e-036
Identities = 144/165 (87%)
Strand = Plus / Plus
Query: 569 cggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccag 628
|||||||||||||||| |||||| ||| || || |||||||||||||||||||||||||
Sbjct: 6399504 cggttgccctggctgaggatggtagggctcatgccgccgccgatggcgtacatgagccag 6399563
Query: 629 tgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgctgc 688
||||||||||||||||| || ||||||||||| || ||||| |||||||||||||||
Sbjct: 6399564 tgcgtgtagtcgttgttgacgacgtggaagaacccccaccggcatcgcggcatccgctgc 6399623
Query: 689 accagccccttgccgaagtggttgaaggcgacggtgacctgcatc 733
|| ||||| ||||||||||||||| || ||||||| |||||||
Sbjct: 6399624 acgagcccacggccgaagtggttgaacgccacggtgatctgcatc 6399668
Score = 89.7 bits (45), Expect = 3e-015
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaac 112
||||||||||||||||||| ||| || |||||||||||||||| |||||||| |||||
Sbjct: 2392066 agtctgtccacccatgctctgtatttcttcccttgtttgtcaccgtaacatgaccccaat 2392007
Query: 113 gcatcaatggatgcatg 129
|||||||| ||||||||
Sbjct: 2392006 gcatcaattgatgcatg 2391990
Score = 73.8 bits (37), Expect = 2e-010
Identities = 55/61 (90%)
Strand = Plus / Plus
Query: 1056 cgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcct 1115
|||||||||||||||| ||||| ||||||||||||||||||||| |||| ||||||||
Sbjct: 6400178 cgatgtgcacctgcgcgccgcggccgtcgatggtcttgtcgctggcgacgaggagctcct 6400237
Query: 1116 g 1116
|
Sbjct: 6400238 g 6400238
Score = 48.1 bits (24), Expect = 0.011
Identities = 48/56 (85%)
Strand = Plus / Plus
Query: 754 gtcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggaga 809
||||||||| ||||||||||| |||| || ||| | |||||||||| ||||||||
Sbjct: 6399870 gtcgctggcgccgaacagcatgacgtcgttgtggttggtgaagtggctgttggaga 6399925
>gb|AU172672.1|AU172672 AU172672 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3490, mRNA sequence
Length = 451
Score = 157 bits (79), Expect = 2e-035
Identities = 185/219 (84%), Gaps = 1/219 (0%)
Strand = Plus / Minus
Query: 324 tgccgacgcggcagttgagcgc-gccggcgtacctggtgagcgactcggcgtactggccg 382
|||||||| |||||||||||| ||||||| || |||||||| || |||||| ||||
Sbjct: 265 tgccgacgtggcagttgagcggtgccggcgaacttggtgagctggccgacgtacttgccg 206
Query: 383 cccttggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggccgccggactgg 442
|||||| |||||| ||||||| |||||| |||||||||||||||||||||||| |
Sbjct: 205 tgcttggcagggatgaagtcgagctggtcgtagctgcgctcgttctggccgccggactcg 146
Query: 443 ttgaagaaggcgccgttgaggaacaggtcgtcctgcgacttccacacccagttcttgtac 502
|| |||||||||||||| | | || |||| ||||||||||||||||||| | |||||||
Sbjct: 145 ttaaagaaggcgccgttcatcatcacgtcgccctgcgacttccacacccactccttgtac 86
Query: 503 tcgctgtactgcgtgtactcccgcttggtcacctccttg 541
||| |||| |||||||||||| ||||||||||||||||
Sbjct: 85 tcgtcgtacggcgtgtactccctcttggtcacctccttg 47
>gb|CV733041.1|CV733041 FLO--07-M13.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--07-M13,
mRNA sequence
Length = 503
Score = 147 bits (74), Expect = 2e-032
Identities = 146/170 (85%)
Strand = Plus / Minus
Query: 372 cgtactggccgcccttggcctggatgaggtcgagcctgtcgtacttgcgctcgttctggc 431
|||||| |||| |||||| |||||| ||||||| |||||| |||||||||||||||
Sbjct: 483 cgtacttgccgtgcttggcagggatgaagtcgagctggtcgtagctgcgctcgttctggc 424
Query: 432 cgccggactggttgaagaaggcgccgttgaggaacaggtcgtcctgcgacttccacaccc 491
||||||||| ||| |||||||||||||| | | || |||| ||||||||||||||||||
Sbjct: 423 cgccggactcgttaaagaaggcgccgttcatcatcacgtcgccctgcgacttccacaccc 364
Query: 492 agttcttgtactcgctgtactgcgtgtactcccgcttggtcacctccttg 541
| | |||||||||| |||| |||||||||||| ||||||||||||||||
Sbjct: 363 actccttgtactcgtcgtacggcgtgtactccctcttggtcacctccttg 314
Score = 117 bits (59), Expect = 1e-023
Identities = 116/135 (85%)
Strand = Plus / Minus
Query: 695 cccttgccgaagtggttgaaggcgacggtgacctgcatctccctgtccttggacgcggcg 754
|||||||||||||||||||| || ||||||| ||||||| || ||||| || || |
Sbjct: 169 cccttgccgaagtggttgaacgccacggtgatctgcatcacctcgtcctgggcgtcgctg 110
Query: 755 tcgctggccccgaacagcataacgtggtcgtgcctcgtgaagtggccgttggagacggtg 814
| |||||| ||||| ||||| |||||||||||| | ||||||||||||||||||| ||||
Sbjct: 109 ttgctggcgccgaagagcatgacgtggtcgtgcttggtgaagtggccgttggagatggtg 50
Query: 815 atggcggtggagccg 829
|||||||||||||||
Sbjct: 49 atggcggtggagccg 35
Score = 107 bits (54), Expect = 1e-020
Identities = 93/106 (87%)
Strand = Plus / Minus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || |||||| | |||| |||||||||||||||||||||||||||
Sbjct: 280 ccctggctgatgatcgtcgggttcatgttgccaccgatggcgtacatgagccagtgcgtg 221
Query: 635 tagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggca 680
||||||||||| || ||||||||||| ||| | |||||||||||
Sbjct: 220 tagtcgttgttgacgacgtggaagaatccgaacctgcagcgcggca 175
>gb|C73240.1|C73240 C73240 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3490_1A, mRNA sequence
Length = 405
Score = 113 bits (57), Expect = 2e-022
Identities = 108/125 (86%)
Strand = Plus / Minus
Query: 417 tgcgctcgttctggccgccggactggttgaagaaggcgccgttgaggaacaggtcgtcct 476
|||||||||||||||||||||||| ||| |||||||||||||| | | | || |||
Sbjct: 265 tgcgctcgttctggccgccggactcgttaaagaaggcgccgttcatcatccacgcgccct 206
Query: 477 gcgacttccacacccagttcttgtactcgctgtactgcgtgtactcccgcttggtcacct 536
|||||||||||||||| | |||||||||| |||| |||||||||||| |||||||||||
Sbjct: 205 gcgacttccacacccactccttgtactcgtcgtacggcgtgtactccctcttggtcacct 146
Query: 537 ccttg 541
|||||
Sbjct: 145 ccttg 141
Score = 107 bits (54), Expect = 1e-020
Identities = 93/106 (87%)
Strand = Plus / Minus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || |||||| | |||| |||||||||||||||||||||||||||
Sbjct: 107 ccctggctgatgatcgtcgggttcatgttgccaccgatggcgtacatgagccagtgcgtg 48
Query: 635 tagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggca 680
||||||||||| || ||||||||||| ||| | |||||||||||
Sbjct: 47 tagtcgttgttgacgacgtggaagaatccgaacctgcagcgcggca 2
>dbj|AK071525.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099K18, full
insert sequence
Length = 1610
Score = 111 bits (56), Expect = 8e-022
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 1 ccacaagtcaaacctccccacccaactatctgaaccagtctgtgtgataaaaagtctgtc 60
|||||||||||| || ||| |||||| |||||||||| ||||| || ||| ||||||||
Sbjct: 1241 ccacaagtcaaatctgaccagccaactgtctgaaccagactgtgagacaaatagtctgtc 1182
Query: 61 cacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaacgcatcaat 120
|||||||| |||||| ||| |||||||||| |||||||||||||| | ||| |||||||
Sbjct: 1181 cacccatgttcggtattttttcccttgtttctcaccataacatgaactcaatgcatcaac 1122
Query: 121 ggatgcatggag 132
|| ||||||||
Sbjct: 1121 agaggcatggag 1110
>dbj|AP003204.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1111C09
Length = 156393
Score = 111 bits (56), Expect = 8e-022
Identities = 113/132 (85%)
Strand = Plus / Plus
Query: 1 ccacaagtcaaacctccccacccaactatctgaaccagtctgtgtgataaaaagtctgtc 60
|||||||||||| || ||| |||||| |||||||||| ||||| || ||| ||||||||
Sbjct: 109768 ccacaagtcaaatctgaccagccaactgtctgaaccagactgtgagacaaatagtctgtc 109827
Query: 61 cacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaacgcatcaat 120
|||||||| |||||| ||| |||||||||| |||||||||||||| | ||| |||||||
Sbjct: 109828 cacccatgttcggtattttttcccttgtttctcaccataacatgaactcaatgcatcaac 109887
Query: 121 ggatgcatggag 132
|| ||||||||
Sbjct: 109888 agaggcatggag 109899
>gb|AACV01001142.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001142, whole
genome shotgun sequence
Length = 8995
Score = 111 bits (56), Expect = 8e-022
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 1 ccacaagtcaaacctccccacccaactatctgaaccagtctgtgtgataaaaagtctgtc 60
|||||||||||| || ||| |||||| |||||||||| ||||| || ||| ||||||||
Sbjct: 8791 ccacaagtcaaatctgaccagccaactgtctgaaccagactgtgagacaaatagtctgtc 8732
Query: 61 cacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaacgcatcaat 120
|||||||| |||||| ||| |||||||||| |||||||||||||| | ||| |||||||
Sbjct: 8731 cacccatgttcggtattttttcccttgtttctcaccataacatgaactcaatgcatcaac 8672
Query: 121 ggatgcatggag 132
|| ||||||||
Sbjct: 8671 agaggcatggag 8660
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 111 bits (56), Expect = 8e-022
Identities = 113/132 (85%)
Strand = Plus / Plus
Query: 1 ccacaagtcaaacctccccacccaactatctgaaccagtctgtgtgataaaaagtctgtc 60
|||||||||||| || ||| |||||| |||||||||| ||||| || ||| ||||||||
Sbjct: 15550041 ccacaagtcaaatctgaccagccaactgtctgaaccagactgtgagacaaatagtctgtc 15550100
Query: 61 cacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaacgcatcaat 120
|||||||| |||||| ||| |||||||||| |||||||||||||| | ||| |||||||
Sbjct: 15550101 cacccatgttcggtattttttcccttgtttctcaccataacatgaactcaatgcatcaac 15550160
Query: 121 ggatgcatggag 132
|| ||||||||
Sbjct: 15550161 agaggcatggag 15550172
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1073 ccgcgcccgtcgatggtcttgt 1094
||||||||||||||||||||||
Sbjct: 20393587 ccgcgcccgtcgatggtcttgt 20393608
>ref|NM_193876.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1272
Score = 111 bits (56), Expect = 8e-022
Identities = 113/132 (85%)
Strand = Plus / Minus
Query: 1 ccacaagtcaaacctccccacccaactatctgaaccagtctgtgtgataaaaagtctgtc 60
|||||||||||| || ||| |||||| |||||||||| ||||| || ||| ||||||||
Sbjct: 1122 ccacaagtcaaatctgaccagccaactgtctgaaccagactgtgagacaaatagtctgtc 1063
Query: 61 cacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaacgcatcaat 120
|||||||| |||||| ||| |||||||||| |||||||||||||| | ||| |||||||
Sbjct: 1062 cacccatgttcggtattttttcccttgtttctcaccataacatgaactcaatgcatcaac 1003
Query: 121 ggatgcatggag 132
|| ||||||||
Sbjct: 1002 agaggcatggag 991
>ref|NT_079947.2| Oryza sativa (japonica cultivar-group)
Length = 1767736
Score = 111 bits (56), Expect = 8e-022
Identities = 113/132 (85%)
Strand = Plus / Plus
Query: 1 ccacaagtcaaacctccccacccaactatctgaaccagtctgtgtgataaaaagtctgtc 60
|||||||||||| || ||| |||||| |||||||||| ||||| || ||| ||||||||
Sbjct: 578506 ccacaagtcaaatctgaccagccaactgtctgaaccagactgtgagacaaatagtctgtc 578565
Query: 61 cacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaacgcatcaat 120
|||||||| |||||| ||| |||||||||| |||||||||||||| | ||| |||||||
Sbjct: 578566 cacccatgttcggtattttttcccttgtttctcaccataacatgaactcaatgcatcaac 578625
Query: 121 ggatgcatggag 132
|| ||||||||
Sbjct: 578626 agaggcatggag 578637
>gb|CH401165.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000002 genomic
scaffold, whole genome shotgun sequence
Length = 5008528
Score = 111 bits (56), Expect = 8e-022
Identities = 113/132 (85%)
Strand = Plus / Plus
Query: 1 ccacaagtcaaacctccccacccaactatctgaaccagtctgtgtgataaaaagtctgtc 60
|||||||||||| || ||| |||||| |||||||||| ||||| || ||| ||||||||
Sbjct: 3963633 ccacaagtcaaatctgaccagccaactgtctgaaccagactgtgagacaaatagtctgtc 3963692
Query: 61 cacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaacgcatcaat 120
|||||||| |||||| ||| |||||||||| |||||||||||||| | ||| |||||||
Sbjct: 3963693 cacccatgttcggtattttttcccttgtttctcaccataacatgaactcaatgcatcaac 3963752
Query: 121 ggatgcatggag 132
|| ||||||||
Sbjct: 3963753 agaggcatggag 3963764
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 111 bits (56), Expect = 8e-022
Identities = 113/132 (85%)
Strand = Plus / Plus
Query: 1 ccacaagtcaaacctccccacccaactatctgaaccagtctgtgtgataaaaagtctgtc 60
|||||||||||| || ||| |||||| |||||||||| ||||| || ||| ||||||||
Sbjct: 15580128 ccacaagtcaaatctgaccagccaactgtctgaaccagactgtgagacaaatagtctgtc 15580187
Query: 61 cacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaacgcatcaat 120
|||||||| |||||| ||| |||||||||| |||||||||||||| | ||| |||||||
Sbjct: 15580188 cacccatgttcggtattttttcccttgtttctcaccataacatgaactcaatgcatcaac 15580247
Query: 121 ggatgcatggag 132
|| ||||||||
Sbjct: 15580248 agaggcatggag 15580259
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1073 ccgcgcccgtcgatggtcttgt 1094
||||||||||||||||||||||
Sbjct: 19978597 ccgcgcccgtcgatggtcttgt 19978618
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 111 bits (56), Expect = 8e-022
Identities = 113/132 (85%)
Strand = Plus / Plus
Query: 1 ccacaagtcaaacctccccacccaactatctgaaccagtctgtgtgataaaaagtctgtc 60
|||||||||||| || ||| |||||| |||||||||| ||||| || ||| ||||||||
Sbjct: 15552259 ccacaagtcaaatctgaccagccaactgtctgaaccagactgtgagacaaatagtctgtc 15552318
Query: 61 cacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaacgcatcaat 120
|||||||| |||||| ||| |||||||||| |||||||||||||| | ||| |||||||
Sbjct: 15552319 cacccatgttcggtattttttcccttgtttctcaccataacatgaactcaatgcatcaac 15552378
Query: 121 ggatgcatggag 132
|| ||||||||
Sbjct: 15552379 agaggcatggag 15552390
Score = 44.1 bits (22), Expect = 0.16
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1073 ccgcgcccgtcgatggtcttgt 1094
||||||||||||||||||||||
Sbjct: 20314870 ccgcgcccgtcgatggtcttgt 20314891
>dbj|AP005708.1| Oryza sativa (japonica cultivar-group) chromosome 6 clone P0507H07, ***
SEQUENCING IN PROGRESS ***
Length = 101786
Score = 109 bits (55), Expect = 3e-021
Identities = 76/83 (91%)
Strand = Plus / Plus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || |||||| ||| || |||||||| ||||||||||||||||||
Sbjct: 35249 ccctggctgatgatcgtcgggttcttgctccctccgatggcatacatgagccagtgcgtg 35308
Query: 635 tagtcgttgttcaccacgtggaa 657
|||||||||||||||||||||||
Sbjct: 35309 tagtcgttgttcaccacgtggaa 35331
Score = 97.6 bits (49), Expect = 1e-017
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 569 cggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccag 628
||||| |||||||| ||||| || |||||| ||| || |||||||||||||| ||||||
Sbjct: 31828 cggttcccctggctaatgatcgtcgggttcttgctccctccgatggcgtacatcagccag 31887
Query: 629 tgcgtgtagtcgttgttcaccacgtggaa 657
||||||||||| |||||||||||||||||
Sbjct: 31888 tgcgtgtagtcattgttcaccacgtggaa 31916
Score = 60.0 bits (30), Expect = 3e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 1062 gcacctgcgctccgcgcccgtcgatggtcttgtcgctg 1099
||||||||||||| ||||||||||| ||||||||||||
Sbjct: 35852 gcacctgcgctccccgcccgtcgatcgtcttgtcgctg 35889
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 700 gccgaagtggttgaaggcgacggtgacctgcat 732
||||||||||||||| |||||||||| ||||||
Sbjct: 35487 gccgaagtggttgaaagcgacggtgatctgcat 35519
>dbj|AK072583.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132G06, full
insert sequence
Length = 2078
Score = 109 bits (55), Expect = 3e-021
Identities = 76/83 (91%)
Strand = Plus / Minus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || |||||| ||| || |||||||| ||||||||||||||||||
Sbjct: 1281 ccctggctgatgatcgtcgggttcttgctccctccgatggcatacatgagccagtgcgtg 1222
Query: 635 tagtcgttgttcaccacgtggaa 657
|||||||||||||||||||||||
Sbjct: 1221 tagtcgttgttcaccacgtggaa 1199
Score = 60.0 bits (30), Expect = 3e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 1062 gcacctgcgctccgcgcccgtcgatggtcttgtcgctg 1099
||||||||||||| ||||||||||| ||||||||||||
Sbjct: 791 gcacctgcgctccccgcccgtcgatcgtcttgtcgctg 754
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 700 gccgaagtggttgaaggcgacggtgacctgcat 732
||||||||||||||| |||||||||| ||||||
Sbjct: 1156 gccgaagtggttgaaagcgacggtgatctgcat 1124
>ref|NT_107232.1| Oryza sativa (japonica cultivar-group)
Length = 367211
Score = 109 bits (55), Expect = 3e-021
Identities = 76/83 (91%)
Strand = Plus / Minus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || |||||| ||| || |||||||| ||||||||||||||||||
Sbjct: 332721 ccctggctgatgatcgtcgggttcttgctccctccgatggcatacatgagccagtgcgtg 332662
Query: 635 tagtcgttgttcaccacgtggaa 657
|||||||||||||||||||||||
Sbjct: 332661 tagtcgttgttcaccacgtggaa 332639
Score = 97.6 bits (49), Expect = 1e-017
Identities = 79/89 (88%)
Strand = Plus / Minus
Query: 569 cggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccag 628
||||| |||||||| ||||| || |||||| ||| || |||||||||||||| ||||||
Sbjct: 336142 cggttcccctggctaatgatcgtcgggttcttgctccctccgatggcgtacatcagccag 336083
Query: 629 tgcgtgtagtcgttgttcaccacgtggaa 657
||||||||||| |||||||||||||||||
Sbjct: 336082 tgcgtgtagtcattgttcaccacgtggaa 336054
Score = 60.0 bits (30), Expect = 3e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 1062 gcacctgcgctccgcgcccgtcgatggtcttgtcgctg 1099
||||||||||||| ||||||||||| ||||||||||||
Sbjct: 332118 gcacctgcgctccccgcccgtcgatcgtcttgtcgctg 332081
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 700 gccgaagtggttgaaggcgacggtgacctgcat 732
||||||||||||||| |||||||||| ||||||
Sbjct: 332483 gccgaagtggttgaaagcgacggtgatctgcat 332451
>dbj|AP003724.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0498C03
Length = 146394
Score = 109 bits (55), Expect = 3e-021
Identities = 76/83 (91%)
Strand = Plus / Minus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || |||||| ||| || |||||||| ||||||||||||||||||
Sbjct: 111904 ccctggctgatgatcgtcgggttcttgctccctccgatggcatacatgagccagtgcgtg 111845
Query: 635 tagtcgttgttcaccacgtggaa 657
|||||||||||||||||||||||
Sbjct: 111844 tagtcgttgttcaccacgtggaa 111822
Score = 97.6 bits (49), Expect = 1e-017
Identities = 79/89 (88%)
Strand = Plus / Minus
Query: 569 cggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccag 628
||||| |||||||| ||||| || |||||| ||| || |||||||||||||| ||||||
Sbjct: 115325 cggttcccctggctaatgatcgtcgggttcttgctccctccgatggcgtacatcagccag 115266
Query: 629 tgcgtgtagtcgttgttcaccacgtggaa 657
||||||||||| |||||||||||||||||
Sbjct: 115265 tgcgtgtagtcattgttcaccacgtggaa 115237
Score = 60.0 bits (30), Expect = 3e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 1062 gcacctgcgctccgcgcccgtcgatggtcttgtcgctg 1099
||||||||||||| ||||||||||| ||||||||||||
Sbjct: 111301 gcacctgcgctccccgcccgtcgatcgtcttgtcgctg 111264
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 700 gccgaagtggttgaaggcgacggtgacctgcat 732
||||||||||||||| |||||||||| ||||||
Sbjct: 111666 gccgaagtggttgaaagcgacggtgatctgcat 111634
>gb|CZ444110.1|CZ444110 UCDRdSpm486_3.1 UCD RdSpm Rice Insertions Oryza sativa (japonica
cultivar-group) genomic clone RdSpm486_3.1, DNA sequence
Length = 439
Score = 105 bits (53), Expect = 5e-020
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 569 cggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccag 628
|||||||||||||||| |||||| ||| || || |||||||||||||||||||||||||
Sbjct: 360 cggttgccctggctgaggatggtagggctcatgccgccgccgatggcgtacatgagccag 419
Query: 629 tgcgtgtagtcgttgtt 645
|||||||||||||||||
Sbjct: 420 tgcgtgtagtcgttgtt 436
>gb|AACV01014424.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014424,
whole genome shotgun sequence
Length = 13752
Score = 101 bits (51), Expect = 8e-019
Identities = 75/83 (90%)
Strand = Plus / Minus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || || ||| ||| || |||||||| ||||||||||||||||||
Sbjct: 127 ccctggctgatgatcgtcggtttcttgctccctccgatggcatacatgagccagtgcgtg 68
Query: 635 tagtcgttgttcaccacgtggaa 657
|||||||||||||||||||||||
Sbjct: 67 tagtcgttgttcaccacgtggaa 45
Score = 97.6 bits (49), Expect = 1e-017
Identities = 79/89 (88%)
Strand = Plus / Minus
Query: 569 cggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccag 628
||||| |||||||| ||||| || |||||| ||| || |||||||||||||| ||||||
Sbjct: 3548 cggttcccctggctaatgatcgtcgggttcttgctccctccgatggcgtacatcagccag 3489
Query: 629 tgcgtgtagtcgttgttcaccacgtggaa 657
||||||||||| |||||||||||||||||
Sbjct: 3488 tgcgtgtagtcattgttcaccacgtggaa 3460
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 101 bits (51), Expect = 8e-019
Identities = 75/83 (90%)
Strand = Plus / Minus
Query: 575 ccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccagtgcgtg 634
|||||||||||||| || || ||| ||| || |||||||| ||||||||||||||||||
Sbjct: 3823668 ccctggctgatgatcgtcggtttcttgctccctccgatggcatacatgagccagtgcgtg 3823609
Query: 635 tagtcgttgttcaccacgtggaa 657
|||||||||||||||||||||||
Sbjct: 3823608 tagtcgttgttcaccacgtggaa 3823586
Score = 97.6 bits (49), Expect = 1e-017
Identities = 79/89 (88%)
Strand = Plus / Minus
Query: 569 cggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagccag 628
||||| |||||||| ||||| || |||||| ||| || |||||||||||||| ||||||
Sbjct: 3827089 cggttcccctggctaatgatcgtcgggttcttgctccctccgatggcgtacatcagccag 3827030
Query: 629 tgcgtgtagtcgttgttcaccacgtggaa 657
||||||||||| |||||||||||||||||
Sbjct: 3827029 tgcgtgtagtcattgttcaccacgtggaa 3827001
Score = 60.0 bits (30), Expect = 3e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 1062 gcacctgcgctccgcgcccgtcgatggtcttgtcgctg 1099
||||||||||||| ||||||||||| ||||||||||||
Sbjct: 3822131 gcacctgcgctccccgcccgtcgatcgtcttgtcgctg 3822094
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 700 gccgaagtggttgaaggcgacggtgacctgcat 732
||||||||||||||| |||||||||| ||||||
Sbjct: 3822496 gccgaagtggttgaaagcgacggtgatctgcat 3822464
>gb|CB674402.1|CB674402 OSJNEe09G23.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe09G23 3', mRNA sequence
Length = 879
Score = 89.7 bits (45), Expect = 3e-015
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaac 112
||||||||||||||||||| ||| || |||||||||||||||| |||||||| |||||
Sbjct: 274 agtctgtccacccatgctctgtatttcttcccttgtttgtcaccgtaacatgaccccaat 333
Query: 113 gcatcaatggatgcatg 129
|||||||| ||||||||
Sbjct: 334 gcatcaattgatgcatg 350
>gb|CV723992.1|CV723992 root--05-H13.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone
root--05-H13, mRNA sequence
Length = 479
Score = 89.7 bits (45), Expect = 3e-015
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaac 112
||||||||||||||||||| ||| || |||||||||||||||| |||||||| |||||
Sbjct: 370 agtctgtccacccatgctctgtatttcttcccttgtttgtcaccgtaacatgaccccaat 311
Query: 113 gcatcaatggatgcatg 129
|||||||| ||||||||
Sbjct: 310 gcatcaattgatgcatg 294
>dbj|AK063330.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-A01, full
insert sequence
Length = 1686
Score = 89.7 bits (45), Expect = 3e-015
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaac 112
||||||||||||||||||| ||| || |||||||||||||||| |||||||| |||||
Sbjct: 1215 agtctgtccacccatgctctgtatttcttcccttgtttgtcaccgtaacatgaccccaat 1156
Query: 113 gcatcaatggatgcatg 129
|||||||| ||||||||
Sbjct: 1155 gcatcaattgatgcatg 1139
>dbj|AP005649.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBa0064G16
Length = 166453
Score = 89.7 bits (45), Expect = 3e-015
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaac 112
||||||||||||||||||| ||| || |||||||||||||||| |||||||| |||||
Sbjct: 7987 agtctgtccacccatgctctgtatttcttcccttgtttgtcaccgtaacatgaccccaat 7928
Query: 113 gcatcaatggatgcatg 129
|||||||| ||||||||
Sbjct: 7927 gcatcaattgatgcatg 7911
>gb|AACV01003332.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003332, whole
genome shotgun sequence
Length = 44353
Score = 89.7 bits (45), Expect = 3e-015
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaac 112
||||||||||||||||||| ||| || |||||||||||||||| |||||||| |||||
Sbjct: 12126 agtctgtccacccatgctctgtatttcttcccttgtttgtcaccgtaacatgaccccaat 12067
Query: 113 gcatcaatggatgcatg 129
|||||||| ||||||||
Sbjct: 12066 gcatcaattgatgcatg 12050
>ref|XM_464125.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1686
Score = 89.7 bits (45), Expect = 3e-015
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaac 112
||||||||||||||||||| ||| || |||||||||||||||| |||||||| |||||
Sbjct: 1215 agtctgtccacccatgctctgtatttcttcccttgtttgtcaccgtaacatgaccccaat 1156
Query: 113 gcatcaatggatgcatg 129
|||||||| ||||||||
Sbjct: 1155 gcatcaattgatgcatg 1139
>ref|NT_107175.1| Oryza sativa (japonica cultivar-group)
Length = 2882457
Score = 89.7 bits (45), Expect = 3e-015
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 53 agtctgtccacccatgctcggtactttctcccttgtttgtcaccataacatgatcccaac 112
||||||||||||||||||| ||| || |||||||||||||||| |||||||| |||||
Sbjct: 2392066 agtctgtccacccatgctctgtatttcttcccttgtttgtcaccgtaacatgaccccaat 2392007
Query: 113 gcatcaatggatgcatg 129
|||||||| ||||||||
Sbjct: 2392006 gcatcaattgatgcatg 2391990
>gb|AQ865437.1|AQ865437 nbeb0025I06f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0025I06f, DNA sequence
Length = 714
Score = 81.8 bits (41), Expect = 8e-013
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 1057 gatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctgctcacgatgagctc 1113
||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||
Sbjct: 713 gatgtgcacctgcgctccgcgccagtcgatggtcttgtcgctgccgacgaggagctc 657
>gb|AQ862064.1|AQ862064 nbeb0018O13f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0018O13f, DNA sequence
Length = 787
Score = 63.9 bits (32), Expect = 2e-007
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 1056 cgatgtgcacctgcgctccgcgcccgtcgatggtcttgtcgctg 1099
|||||||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 717 cgatgtgcacatgcgcgccgcggccgtcgatggtcttgtcgctg 674
>gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 genomic sequence, complete
sequence
Length = 117157
Score = 61.9 bits (31), Expect = 7e-007
Identities = 133/167 (79%)
Strand = Plus / Minus
Query: 567 agcggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagcc 626
||||||||||||||||| ||||||||||| || ||| || || ||||||||||| ||
Sbjct: 112456 agcggttgccctggctgttgatggtggggctcgcgctccctccaatggcgtacatctccc 112397
Query: 627 agtgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgct 686
| ||||||||||||||| || | ||||||| | || | ||| || ||||||||||
Sbjct: 112396 acgccgtgtagtcgttgttgacgatgtggaagtaccccctcctgcaccgaggcatccgct 112337
Query: 687 gcaccagccccttgccgaagtggttgaaggcgacggtgacctgcatc 733
|||| ||| | |||||||||||||| |||| ||| |||||||||
Sbjct: 112336 gcacgagctggatcccgaagtggttgaacgcgatggtcacctgcatc 112290
Score = 54.0 bits (27), Expect = 2e-004
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 1073 ccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcct 1115
||||| |||||||||||||||| |||| |||||| ||||||||
Sbjct: 111944 ccgcggccgtcgatggtcttgtagctgttcacgaggagctcct 111902
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16,
complete sequence
Length = 179157
Score = 61.9 bits (31), Expect = 7e-007
Identities = 133/167 (79%)
Strand = Plus / Plus
Query: 567 agcggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagcc 626
||||||||||||||||| ||||||||||| || ||| || || ||||||||||| ||
Sbjct: 124509 agcggttgccctggctgttgatggtggggctcgcgctccctccaatggcgtacatctccc 124568
Query: 627 agtgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgct 686
| ||||||||||||||| || | ||||||| | || | ||| || ||||||||||
Sbjct: 124569 acgccgtgtagtcgttgttgacgatgtggaagtaccccctcctgcaccgaggcatccgct 124628
Query: 687 gcaccagccccttgccgaagtggttgaaggcgacggtgacctgcatc 733
|||| ||| | |||||||||||||| |||| ||| |||||||||
Sbjct: 124629 gcacgagctggatcccgaagtggttgaacgcgatggtcacctgcatc 124675
Score = 54.0 bits (27), Expect = 2e-004
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 1073 ccgcgcccgtcgatggtcttgtcgctgctcacgatgagctcct 1115
||||| |||||||||||||||| |||| |||||| ||||||||
Sbjct: 125021 ccgcggccgtcgatggtcttgtagctgttcacgaggagctcct 125063
>gb|AACV01021719.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021719, whole
genome shotgun sequence
Length = 27956
Score = 61.9 bits (31), Expect = 7e-007
Identities = 133/167 (79%)
Strand = Plus / Plus
Query: 567 agcggttgccctggctgatgatggtggggttccggctgccgccgatggcgtacatgagcc 626
||||||||||||||||| ||||||||||| || ||| || || ||||||||||| ||
Sbjct: 11283 agcggttgccctggctgttgatggtggggctcgcgctccctccaatggcgtacatctccc 11342
Query: 627 agtgcgtgtagtcgttgttcaccacgtggaagaagccgtgacggcagcgcggcatccgct 686
| ||||||||||||||| || | ||||||| | || | ||| || ||||||||||
Sbjct: 11343 acgccgtgtagtcgttgttgacgatgtggaagtaccccctcctgcaccgaggcatccgct 11402
Query: 687 gcaccagccccttgccgaagtggttgaaggcgacggtgacctgcatc 733
|||| ||| | |||||||||||||| |||| ||| |||||||||
Sbjct: 11403 gcacgagctggatcccgaagtggttgaacgcgatggtcacctgcatc 11449
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 1079 ccgtcgatggtcttgtcgctgctcacgatgagctcct 1115
|||||||||||||||| |||| |||||| ||||||||
Sbjct: 11803 ccgtcgatggtcttgtagctgttcacgaggagctcct 11839
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,248,764
Number of Sequences: 438736
Number of extensions: 2248764
Number of successful extensions: 29320
Number of sequences better than 0.5: 103
Number of HSP's better than 0.5 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 26578
Number of HSP's gapped (non-prelim): 2692
length of query: 1136
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1115
effective length of database: 2,791,206,460
effective search space: 3112195202900
effective search space used: 3112195202900
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)