BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440570.2.2
(905 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU182775.1|AU182775 AU182775 Rice panicle shorter than 3... 640 0.0
dbj|AK061929.1| Oryza sativa (japonica cultivar-group) cDNA... 640 0.0
dbj|AK120877.1| Oryza sativa (japonica cultivar-group) cDNA... 640 0.0
ref|NM_185271.1| Oryza sativa (japonica cultivar-group), p... 636 e-180
dbj|AK102810.1| Oryza sativa (japonica cultivar-group) cDNA... 624 e-176
gb|CF329310.1|CF329310 NACL--04-J11.g1 Rice callus plasmid ... 559 e-157
gb|CF282056.1|CF282056 14ETL--09-G06.b1 Rice etiolated leaf... 533 e-149
gb|CF310085.1|CF310085 ABF--04-J02.b1 ABF3-overexpressing t... 533 e-149
gb|CF297823.1|CF297823 30DGS--08-O22.b1 Rice leaf plasmid c... 527 e-147
gb|CF340548.1|CF340548 RCL1--08-F24.g1 Regenerated callus l... 476 e-131
gb|AU088579.1|AU088579 AU088579 Rice callus Oryza sativa (j... 472 e-130
gb|CF322760.1|CF322760 HDN--01-P22.g1 OsHDAC1-overexpressin... 462 e-127
gb|CD670723.1|CD670723 OsMR139 5MT resistant rice mutant cD... 458 e-126
gb|CB000150.1|CB000150 S345X_E10 Rice cold stress germinati... 454 e-125
gb|CF329309.1|CF329309 NACL--04-J11.b1 Rice callus plasmid ... 452 e-124
gb|AU095900.1|AU095900 AU095900 Rice green shoot Oryza sati... 446 e-123
gb|CF282057.1|CF282057 14ETL--09-G06.g1 Rice etiolated leaf... 444 e-122
gb|CF320096.1|CF320096 HD--10-N13.g1 OsHDAC1-overexpressing... 392 e-106
gb|AU062406.1|AU062406 AU062406 Rice callus Oryza sativa (j... 355 3e-095
gb|AU063056.2|AU063056 AU063056 Rice callus Oryza sativa (j... 355 3e-095
gb|AU182776.1|AU182776 AU182776 Rice panicle shorter than 3... 321 4e-085
gb|CV721809.1|CV721809 YBH--05-G12.b1 Rice before heading y... 317 6e-084
gb|D24909.1|D24909 RICR2751A Rice root Oryza sativa (japoni... 268 5e-069
gb|D38863.1|D38863 RICC1763A Rice callus Oryza sativa (japo... 262 3e-067
gb|CV732089.1|CV732089 FLO--06-G14.b1 Rice flower lambda ph... 262 3e-067
gb|CV724476.1|CV724476 14Salt--01-B05.b1 Salt treated rice ... 260 1e-066
gb|D46667.1|D46667 RICS11476A Rice green shoot Oryza sativa... 254 7e-065
dbj|AK121580.1| Oryza sativa (japonica cultivar-group) cDNA... 250 1e-063
gb|C74736.1|C74736 C74736 Rice cDNA from immature leaf incl... 246 2e-062
gb|AC087551.3| Oryza sativa (japonica cultivar-group) chrom... 246 2e-062
gb|AACV01010916.1| Oryza sativa (japonica cultivar-group) c... 246 2e-062
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 246 2e-062
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 246 2e-062
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 246 2e-062
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 246 2e-062
gb|AU160828.1|AU160828 AU160828 Rice callus Oryza sativa (j... 244 7e-062
gb|CF277818.1|CF277818 14ETL--03-H24.b1 Rice etiolated leaf... 238 4e-060
gb|CF336041.1|CF336041 JMT--05-P07.b1 AtJMT-overexpressing ... 230 1e-057
gb|CA998057.1|CA998057 S234X_H08 Rice cold stress germinati... 228 4e-057
gb|CF332557.1|CF332557 JMT--01-B20.b1 AtJMT-overexpressing ... 218 4e-054
gb|CF294993.1|CF294993 30DGS--04-L19.b1 Rice leaf plasmid c... 208 4e-051
gb|CV725647.1|CV725647 14Salt--02-N11.b1 Salt treated rice ... 200 9e-049
gb|CV729906.1|CV729906 FLO--03-C24.b1 Rice flower lambda ph... 198 4e-048
gb|AU164919.1|AU164919 AU164919 Rice cDNA from immature lea... 196 1e-047
gb|CF300905.1|CF300905 7LEAF--05-I22.b1 Rice leaf plasmid c... 196 1e-047
gb|CV726120.1|CV726120 14Salt--03-J12.g1 Salt treated rice ... 196 1e-047
gb|CV729581.1|CV729581 FLO--02-J17.b1 Rice flower lambda ph... 196 1e-047
gb|CV730920.1|CV730920 FLO--04-L09.b1 Rice flower lambda ph... 196 1e-047
gb|CV728080.1|CV728080 14Salt--06-J11.b1 Salt treated rice ... 194 6e-047
gb|CV726495.1|CV726495 14Salt--04-C20.b1 Salt treated rice ... 192 2e-046
gb|CV728321.1|CV728321 14Salt--06-P13.b1 Salt treated rice ... 192 2e-046
gb|CV733044.1|CV733044 FLO--07-M15.b1 Rice flower lambda ph... 192 2e-046
gb|CV734091.1|CV734091 FLO--09-E21.b1 Rice flower lambda ph... 192 2e-046
gb|CV730689.1|CV730689 FLO--04-F21.b1 Rice flower lambda ph... 190 9e-046
gb|CV731204.1|CV731204 FLO--05-C04.b1 Rice flower lambda ph... 190 9e-046
gb|CV732390.1|CV732390 FLO--06-N14.b1 Rice flower lambda ph... 190 9e-046
gb|CV730389.1|CV730389 FLO--03-O14.b1 Rice flower lambda ph... 186 1e-044
gb|CV725750.1|CV725750 14Salt--02-P23.b1 Salt treated rice ... 184 6e-044
gb|CV724509.1|CV724509 14Salt--01-C03.b1 Salt treated rice ... 182 2e-043
gb|CV724789.1|CV724789 14Salt--01-I24.b1 Salt treated rice ... 182 2e-043
gb|CV728261.1|CV728261 14Salt--06-O02.b1 Salt treated rice ... 182 2e-043
gb|CV733443.1|CV733443 FLO--08-F19.b1 Rice flower lambda ph... 182 2e-043
gb|AU058362.1|AU058362 AU058362 Oryza sativa Nipponbare imm... 176 1e-041
gb|AU071053.1|AU071053 AU071053 Rice cDNA from young root O... 172 2e-040
gb|CF281911.1|CF281911 14ETL--09-C21.b1 Rice etiolated leaf... 172 2e-040
gb|CF293256.1|CF293256 30DGS--02-G01.g1 Rice leaf plasmid c... 172 2e-040
gb|CF293717.1|CF293717 30DGS--03-A01.g1 Rice leaf plasmid c... 172 2e-040
gb|CF293798.1|CF293798 30DGS--03-B18.b1 Rice leaf plasmid c... 172 2e-040
gb|CF300891.1|CF300891 7LEAF--05-I15.b1 Rice leaf plasmid c... 172 2e-040
gb|CF328157.1|CF328157 NACL--02-O21.b1 Rice callus plasmid ... 172 2e-040
gb|CV720992.1|CV720992 YBH--02-I10.b1 Rice before heading y... 172 2e-040
gb|CV725996.1|CV725996 14Salt--03-G11.g1 Salt treated rice ... 172 2e-040
gb|CV728734.1|CV728734 FLO--01-D14.g1 Rice flower lambda ph... 172 2e-040
dbj|AK066329.1| Oryza sativa (japonica cultivar-group) cDNA... 172 2e-040
ref|XM_479492.1| Oryza sativa (japonica cultivar-group), mRNA 172 2e-040
gb|CF281332.1|CF281332 14ETL--08-F15.b1 Rice etiolated leaf... 167 1e-038
gb|CF292064.1|CF292064 14ROOT--02-L23.b1 Rice root plasmid ... 165 5e-038
gb|CF333134.1|CF333134 JMT--01-O13.g1 AtJMT-overexpressing ... 163 2e-037
gb|CF333633.1|CF333633 JMT--02-J18.g1 AtJMT-overexpressing ... 163 2e-037
gb|AU062875.2|AU062875 AU062875 Rice callus Oryza sativa (j... 161 8e-037
gb|CF313488.1|CF313488 HD--01-K05.g1 OsHDAC1-overexpressing... 155 5e-035
gb|CF293716.1|CF293716 30DGS--03-A01.b1 Rice leaf plasmid c... 153 2e-034
gb|CF328158.1|CF328158 NACL--02-O21.g1 Rice callus plasmid ... 153 2e-034
gb|CF313487.1|CF313487 HD--01-K05.b1 OsHDAC1-overexpressing... 145 5e-032
gb|CF293255.1|CF293255 30DGS--02-G01.b1 Rice leaf plasmid c... 135 5e-029
gb|CF324959.1|CF324959 JMT1--01-O23.g1 AtJMT-overexpressing... 135 5e-029
gb|CF336042.1|CF336042 JMT--05-P07.g1 AtJMT-overexpressing ... 135 5e-029
gb|CV725751.1|CV725751 14Salt--02-P23.g1 Salt treated rice ... 135 5e-029
gb|CV729582.1|CV729582 FLO--02-J17.g1 Rice flower lambda ph... 135 5e-029
gb|CV729907.1|CV729907 FLO--03-C24.g1 Rice flower lambda ph... 135 5e-029
gb|CV734092.1|CV734092 FLO--09-E21.g1 Rice flower lambda ph... 135 5e-029
gb|AU166709.1|AU166709 AU166709 Rice callus (2001) Oryza sa... 129 3e-027
gb|CV725648.1|CV725648 14Salt--02-N11.g1 Salt treated rice ... 129 3e-027
gb|CV732090.1|CV732090 FLO--06-G14.g1 Rice flower lambda ph... 127 1e-026
gb|CV733045.1|CV733045 FLO--07-M15.g1 Rice flower lambda ph... 127 1e-026
gb|AC118671.1| Oryza sativa (japonica cultivar-group) chrom... 125 4e-026
gb|AC121491.2| Oryza sativa (japonica cultivar-group) chrom... 125 4e-026
gb|AACV01006568.1| Oryza sativa (japonica cultivar-group) c... 125 4e-026
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 125 4e-026
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 125 4e-026
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 125 4e-026
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 125 4e-026
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 125 4e-026
gb|CV725995.1|CV725995 14Salt--03-G11.b1 Salt treated rice ... 123 2e-025
gb|CV727988.1|CV727988 14Salt--06-G23.g1 Salt treated rice ... 123 2e-025
gb|CF293799.1|CF293799 30DGS--03-B18.g1 Rice leaf plasmid c... 121 7e-025
gb|CV726496.1|CV726496 14Salt--04-C20.g1 Salt treated rice ... 121 7e-025
gb|CV730183.1|CV730183 FLO--03-J13.g1 Rice flower lambda ph... 121 7e-025
gb|CV730390.1|CV730390 FLO--03-O14.g1 Rice flower lambda ph... 121 7e-025
gb|CV732391.1|CV732391 FLO--06-N14.g1 Rice flower lambda ph... 121 7e-025
gb|C98158.1|C98158 C98158 Rice callus Oryza sativa (japonic... 115 4e-023
gb|CF281333.1|CF281333 14ETL--08-F15.g1 Rice etiolated leaf... 113 2e-022
gb|CV728081.1|CV728081 14Salt--06-J11.g1 Salt treated rice ... 113 2e-022
gb|AU162616.1|AU162616 AU162616 Rice cDNA from young root O... 109 3e-021
gb|CV724790.1|CV724790 14Salt--01-I24.g1 Salt treated rice ... 109 3e-021
gb|CV727987.1|CV727987 14Salt--06-G23.b1 Salt treated rice ... 109 3e-021
dbj|AP004343.2| Oryza sativa (japonica cultivar-group) geno... 109 3e-021
dbj|AP006268.4| Oryza sativa (japonica cultivar-group) geno... 109 3e-021
gb|AACV01017004.1| Oryza sativa (japonica cultivar-group) c... 109 3e-021
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 109 3e-021
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 109 3e-021
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 109 3e-021
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 109 3e-021
gb|D15568.1|D15568 RICC0844A Rice callus Oryza sativa (japo... 107 1e-020
gb|CF292065.1|CF292065 14ROOT--02-L23.g1 Rice root plasmid ... 100 3e-018
gb|CV730690.1|CV730690 FLO--04-F21.g1 Rice flower lambda ph... 96 4e-017
gb|C97289.1|C97289 C97289 Rice callus Oryza sativa (japonic... 94 2e-016
gb|CF281912.1|CF281912 14ETL--09-C21.g1 Rice etiolated leaf... 94 2e-016
gb|AU068327.1|AU068327 AU068327 Rice callus Oryza sativa (j... 92 6e-016
gb|CF300892.1|CF300892 7LEAF--05-I15.g1 Rice leaf plasmid c... 90 2e-015
gb|CF300906.1|CF300906 7LEAF--05-I22.g1 Rice leaf plasmid c... 90 2e-015
gb|D23370.1|D23370 RICC2709A Rice callus Oryza sativa (japo... 88 1e-014
gb|AU091867.1|AU091867 AU091867 Rice panicle at flowering s... 86 4e-014
gb|CV724477.1|CV724477 14Salt--01-B05.g1 Salt treated rice ... 76 4e-011
gb|CV728733.1|CV728733 FLO--01-D14.b1 Rice flower lambda ph... 72 6e-010
gb|CF277819.1|CF277819 14ETL--03-H24.g1 Rice etiolated leaf... 70 2e-009
gb|AU031524.1|AU031524 AU031524 Rice cDNA from immature lea... 60 2e-006
dbj|AK110540.1| Oryza sativa (japonica cultivar-group) cDNA... 60 2e-006
gb|AACV01009084.1| Oryza sativa (japonica cultivar-group) c... 46 0.033
ref|XM_471494.1| Oryza sativa (japonica cultivar-group), p... 46 0.033
ref|NT_079855.2| Oryza sativa (japonica cultivar-group) 46 0.033
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.033
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.033
emb|AL606602.2|OSJN00067 Oryza sativa genomic DNA, chromoso... 46 0.033
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 46 0.033
gb|BU099199.1|BU099199 S234-XH8 Rice cold stress germinatio... 44 0.13
>gb|AU182775.1|AU182775 AU182775 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30924, mRNA sequence
Length = 628
Score = 640 bits (323), Expect = 0.0
Identities = 525/591 (88%), Gaps = 6/591 (1%)
Strand = Plus / Plus
Query: 61 ccctagcgccgccgcacccgcagga---atgggtatcgacctcgtcgccggtgggaggaa 117
|||||||||||||||| | |||| | ||||||||||||||||| ||||| ||||||||
Sbjct: 13 ccctagcgccgccgcagcagcagcagccatgggtatcgacctcgttgccggcgggaggaa 72
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaa 177
|||||||| |||||||| ||||| | ||| |||||||||||||||||||||||||||||
Sbjct: 73 caagaagacgaagcgcaccgcgccgaggtcggacgatgtctacctcaagctcctcgtcaa 132
Query: 178 gctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagag 237
||| ||||||||| |||| ||||| |||||||| || ||||| || || || ||||||||
Sbjct: 133 gctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaagag 192
Query: 238 gcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtcaagtttat 297
||| |||||||| || |||||||| || || ||||| |||||||||| | |||||| ||
Sbjct: 193 gctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttcat 252
Query: 298 ggaaggaaaggagaagaaca---ttgctgtcattgttggcacagtcacagatgacaaaag 354
|||||| |||||| |||||| ||||||| |||||||| |||||||| |||||||| ||
Sbjct: 253 ggaaggcaaggaggagaacaacattgctgtgattgttggtacagtcactgatgacaagag 312
Query: 355 gatccaggaggttccagcaatgaaggttactgccctgaggttcacggagacagcaagggc 414
|||||| ||| |||| ||||||||||||||||||||||||||||||||| || |||||
Sbjct: 313 gatccaagagattccgaaaatgaaggttactgccctgaggttcacggagacggctagggc 372
Query: 415 caggattgtcaatgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctcc 474
||||||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 373 aaggattgtcaatgctggcggcgagtgcctcaccttcgaccagcttgctctccgtgctcc 432
Query: 475 acttggcgagaacacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggca 534
||||| ||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 433 gcttggggagaacacggtcctcttgaggggtcccaagaatgcccgtgaggccgtcaggca 492
Query: 535 ctttggcaaggctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaaggg 594
|||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 493 ctttggtaaggctcctggtgtgccgcacagccacacgaagccatatgtgcgctccaaggg 552
Query: 595 aaggaagttcgagaaggctcgtggcaggaggaacagccgtggattcaaggt 645
|||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 553 aaggaagttcgagaaggcccgtggcaggaggaacagccgtggattcaaggt 603
>dbj|AK061929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-C09, full
insert sequence
Length = 839
Score = 640 bits (323), Expect = 0.0
Identities = 525/591 (88%), Gaps = 6/591 (1%)
Strand = Plus / Plus
Query: 61 ccctagcgccgccgcacccgcagga---atgggtatcgacctcgtcgccggtgggaggaa 117
|||||||||||||||| | |||| | ||||||||||||||||| ||||| ||||||||
Sbjct: 36 ccctagcgccgccgcagcagcagcagccatgggtatcgacctcgttgccggcgggaggaa 95
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaa 177
|||||||| |||||||| ||||| | ||| |||||||||||||||||||||||||||||
Sbjct: 96 caagaagacgaagcgcaccgcgccgaggtcggacgatgtctacctcaagctcctcgtcaa 155
Query: 178 gctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagag 237
||| ||||||||| |||| ||||| |||||||| || ||||| || || || ||||||||
Sbjct: 156 gctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaagag 215
Query: 238 gcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtcaagtttat 297
||| |||||||| || |||||||| || || ||||| |||||||||| | |||||| ||
Sbjct: 216 gctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttcat 275
Query: 298 ggaaggaaaggagaagaaca---ttgctgtcattgttggcacagtcacagatgacaaaag 354
|||||| |||||| |||||| ||||||| |||||||| |||||||| |||||||| ||
Sbjct: 276 ggaaggcaaggaggagaacaacattgctgtgattgttggtacagtcactgatgacaagag 335
Query: 355 gatccaggaggttccagcaatgaaggttactgccctgaggttcacggagacagcaagggc 414
|||||| ||| |||| ||||||||||||||||||||||||||||||||| || |||||
Sbjct: 336 gatccaagagattccgaaaatgaaggttactgccctgaggttcacggagacggctagggc 395
Query: 415 caggattgtcaatgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctcc 474
||||||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 396 aaggattgtcaatgctggcggcgagtgcctcaccttcgaccagcttgctctccgtgctcc 455
Query: 475 acttggcgagaacacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggca 534
||||| ||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 456 gcttggggagaacacggtcctcttgaggggtcccaagaatgcccgtgaggccgtcaggca 515
Query: 535 ctttggcaaggctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaaggg 594
|||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 516 ctttggtaaggctcctggtgtgccgcacagccacacgaagccatatgtgcgctccaaggg 575
Query: 595 aaggaagttcgagaaggctcgtggcaggaggaacagccgtggattcaaggt 645
|||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 576 aaggaagttcgagaaggcccgtggcaggaggaacagccgtggattcaaggt 626
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 668 gtgttgccatcagcatagtgcaaccgttgtgtttgatcagtcgacagtaattagtaatca 727
||||||| ||| |||| |||| |||||| ||||||| || |||||||||||||||| |||
Sbjct: 649 gtgttgcgatcggcattgtgcgaccgttctgtttgagcaatcgacagtaattagtagtca 708
Query: 728 ct 729
||
Sbjct: 709 ct 710
>dbj|AK120877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027I12, full
insert sequence
Length = 997
Score = 640 bits (323), Expect = 0.0
Identities = 525/591 (88%), Gaps = 6/591 (1%)
Strand = Plus / Plus
Query: 61 ccctagcgccgccgcacccgcagga---atgggtatcgacctcgtcgccggtgggaggaa 117
|||||||||||||||| | |||| | ||||||||||||||||| ||||| ||||||||
Sbjct: 37 ccctagcgccgccgcagcagcagcagccatgggtatcgacctcgttgccggcgggaggaa 96
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaa 177
|||||||| |||||||| ||||| | ||| |||||||||||||||||||||||||||||
Sbjct: 97 caagaagacgaagcgcaccgcgccgaggtcggacgatgtctacctcaagctcctcgtcaa 156
Query: 178 gctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagag 237
||| ||||||||| |||| ||||| |||||||| || ||||| || || || ||||||||
Sbjct: 157 gctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaagag 216
Query: 238 gcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtcaagtttat 297
||| |||||||| || |||||||| || || ||||| |||||||||| | |||||| ||
Sbjct: 217 gctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttcat 276
Query: 298 ggaaggaaaggagaagaaca---ttgctgtcattgttggcacagtcacagatgacaaaag 354
|||||| |||||| |||||| ||||||| |||||||| |||||||| |||||||| ||
Sbjct: 277 ggaaggcaaggaggagaacaacattgctgtgattgttggtacagtcactgatgacaagag 336
Query: 355 gatccaggaggttccagcaatgaaggttactgccctgaggttcacggagacagcaagggc 414
|||||| ||| |||| ||||||||||||||||||||||||||||||||| || |||||
Sbjct: 337 gatccaagagattccgaaaatgaaggttactgccctgaggttcacggagacggctagggc 396
Query: 415 caggattgtcaatgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctcc 474
||||||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 397 aaggattgtcaatgctggcggcgagtgcctcaccttcgaccagcttgctctccgtgctcc 456
Query: 475 acttggcgagaacacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggca 534
||||| ||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 457 gcttggggagaacacggtcctcttgaggggtcccaagaatgcccgtgaggccgtcaggca 516
Query: 535 ctttggcaaggctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaaggg 594
|||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 517 ctttggtaaggctcctggtgtgccgcacagccacacgaagccatatgtgcgctccaaggg 576
Query: 595 aaggaagttcgagaaggctcgtggcaggaggaacagccgtggattcaaggt 645
|||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 577 aaggaagttcgagaaggcccgtggcaggaggaacagccgtggattcaaggt 627
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 668 gtgttgccatcagcatagtgcaaccgttgtgtttgatcagtcgacagtaattagtaatca 727
||||||| ||| |||| |||| |||||| ||||||| || |||||||||||||||| |||
Sbjct: 650 gtgttgcgatcggcattgtgcgaccgttctgtttgagcaatcgacagtaattagtagtca 709
Query: 728 ct 729
||
Sbjct: 710 ct 711
>ref|NM_185271.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 567
Score = 636 bits (321), Expect = e-180
Identities = 503/563 (89%), Gaps = 3/563 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
||||||||||||||||| ||||| |||||||| |||||||| |||||||| ||||| | |
Sbjct: 1 atgggtatcgacctcgttgccggcgggaggaacaagaagacgaagcgcaccgcgccgagg 60
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||||||||||||||||||||||||||| ||||||||| |||| ||||| |||
Sbjct: 61 tcggacgatgtctacctcaagctcctcgtcaagctgtaccgtttcctggtgaggagaacc 120
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
||||| || ||||| || || || ||||||||||| |||||||| || |||||||| ||
Sbjct: 121 aagagtaacttcaatgccgtgatcctcaagaggctcttcatgagcaagaccaaccgcccg 180
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaaaggagaagaaca---ttgct 322
|| ||||| |||||||||| | |||||| |||||||| |||||| |||||| |||||
Sbjct: 181 ccgctctccctgcgccgcctcgccaagttcatggaaggcaaggaggagaacaacattgct 240
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| |||||||| |||||||| |||||||| |||||||| ||| |||| ||||||||||
Sbjct: 241 gtgattgttggtacagtcactgatgacaagaggatccaagagattccgaaaatgaaggtt 300
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
||||||||||||||||||||||| || ||||| ||||||||||||||||| |||||||||
Sbjct: 301 actgccctgaggttcacggagacggctagggcaaggattgtcaatgctggcggcgagtgc 360
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| || |||||||||||||| |||||||| ||||| |||||||||||||||||||||
Sbjct: 361 ctcaccttcgaccagcttgctctccgtgctccgcttggggagaacacggtcctcttgagg 420
Query: 503 ggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcac 562
|| |||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||
Sbjct: 421 ggtcccaagaatgcccgtgaggccgtcaggcactttggtaaggctcctggtgtgccgcac 480
Query: 563 agccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcagg 622
|||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 481 agccacacgaagccatatgtgcgctccaagggaaggaagttcgagaaggcccgtggcagg 540
Query: 623 aggaacagccgtggattcaaggt 645
|||||||||||||||||||||||
Sbjct: 541 aggaacagccgtggattcaaggt 563
>dbj|AK102810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108L02, full
insert sequence
Length = 824
Score = 624 bits (315), Expect = e-176
Identities = 523/591 (88%), Gaps = 6/591 (1%)
Strand = Plus / Plus
Query: 61 ccctagcgccgccgcacccgcagga---atgggtatcgacctcgtcgccggtgggaggaa 117
|||||||||||||||| | |||| | ||||||||||||||||| ||||| ||||||||
Sbjct: 37 ccctagcgccgccgcagcagcagcagccatgggtatcgacctcgttgccggcgggaggaa 96
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaa 177
|||||||| |||||||| ||||| | ||| |||||||||||||||||||||||||||||
Sbjct: 97 caagaagacgaagcgcaccgcgccgaggtcggacgatgtctacctcaagctcctcgtcaa 156
Query: 178 gctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagag 237
||| ||||||||| |||| ||||| |||||||| || ||||| || || || ||||||||
Sbjct: 157 gctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaagag 216
Query: 238 gcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtcaagtttat 297
||| |||||||| || |||||||| || || ||||| |||||||||| | |||||| ||
Sbjct: 217 gctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttcat 276
Query: 298 ggaaggaaaggagaagaaca---ttgctgtcattgttggcacagtcacagatgacaaaag 354
|||||| |||||| |||||| ||||||| |||||||| |||||||| |||||||| ||
Sbjct: 277 ggaaggcaaggaggagaacaacattgctgtgattgttggtacagtcactgatgacaagag 336
Query: 355 gatccaggaggttccagcaatgaaggttactgccctgaggttcacggagacagcaagggc 414
|||||| ||| |||| ||||||||||||||||||||||||||||||||| || |||||
Sbjct: 337 gatccaagagattccgaaaatgaaggttactgccctgaggttcacggagacggctagggc 396
Query: 415 caggattgtcaatgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctcc 474
||||||||||||||||| |||||||||||||| || |||||||||||||| |||||||
Sbjct: 397 aaggattgtcaatgctggcggcgagtgcctcaccttcgaccagcttgctctcagtgctcc 456
Query: 475 acttggcgagaacacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggca 534
||||| |||||||||||||||||| |||| |||||||||||||||||||| || |||||
Sbjct: 457 gcttggggagaacacggtcctcttggggggtcccaagaatgcccgtgaggccgtcaggca 516
Query: 535 ctttggcaaggctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaaggg 594
|||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 517 ctttggtaaggctcctggtgtgccgcacagccacacgaagccatatgtgcgctccaaggg 576
Query: 595 aaggaagttcgagaaggctcgtggcaggaggaacagccgtggattcaaggt 645
|||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 577 aaggaagttcgagaaggcccgtggcaggaggaacagccgtggattcaaggt 627
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 668 gtgttgccatcagcatagtgcaaccgttgtgtttgatcagtcgacagtaattagtaatca 727
||||||| ||| |||| |||| |||||| ||||||| || |||||||||||||||| |||
Sbjct: 650 gtgttgcgatcggcattgtgcgaccgttctgtttgagcaatcgacagtaattagtagtca 709
Query: 728 ct 729
||
Sbjct: 710 ct 711
>gb|CF329310.1|CF329310 NACL--04-J11.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--04-J11, mRNA sequence
Length = 635
Score = 559 bits (282), Expect = e-157
Identities = 446/500 (89%), Gaps = 3/500 (0%)
Strand = Plus / Plus
Query: 149 gacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaag 208
|||||||||||||||||||||||||||||||| ||||||||| ||| ||||| ||||||
Sbjct: 13 gacgatgtctacctcaagctcctcgtcaagctgtaccgtttcctggcgaggagaaccaag 72
Query: 209 agcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgaccacca 268
|| || ||||| || || || ||||||||||| |||||||| || |||||||| || ||
Sbjct: 73 agtaacttcaatgccgtgatcctcaagaggctcttcatgagcaagaccaaccgcccgcct 132
Query: 269 atctccatgcgccgccttgtcaagtttatggaaggaaaggagaagaaca---ttgctgtc 325
||||| |||||||||| | |||||| |||||||| |||||| |||||| |||||||
Sbjct: 133 ctctccctgcgccgcctcgccaagttcatggaaggcaaggaggagaacaacattgctgtg 192
Query: 326 attgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttact 385
|||||||| |||||||| |||||||| ||||||| ||| |||| |||||||||||||
Sbjct: 193 attgttggtacagtcactgatgacaagaggatccgagagattccgaaaatgaaggttact 252
Query: 386 gccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgcctc 445
|||||||||||||||||||| || ||||| ||||||||||||||||| ||||||||||||
Sbjct: 253 gccctgaggttcacggagacggctagggcaaggattgtcaatgctggcggcgagtgcctc 312
Query: 446 acatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggggc 505
|| || |||||||||||||| |||||||| ||||| |||||||||||||||||||||||
Sbjct: 313 accttcgaccagcttgctctccgtgctccgcttggggagaacacggtcctcttgaggggt 372
Query: 506 cccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcacagc 565
|||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||||
Sbjct: 373 cccaagaatgcccgtgaggccgtcaggcactttggtaaggctcctggtgtgccgcacagc 432
Query: 566 cacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcaggagg 625
||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 433 cacacgaagccatatgtgcgctccaagggaaggaagttcgagaaggcccgtggcaggagg 492
Query: 626 aacagccgtggattcaaggt 645
||||||||||||||||||||
Sbjct: 493 aacagccgtggattcaaggt 512
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 668 gtgttgccatcagcatagtgcaaccgttgtgtttgatcagtcgacagtaattagtaatca 727
||||||| ||| |||| |||| |||||| ||||||| || |||||||||||||||| |||
Sbjct: 535 gtgttgcgatcggcattgtgcgaccgttctgtttgagcaatcgacagtaattagtagtca 594
Query: 728 ct 729
||
Sbjct: 595 ct 596
>gb|CF282056.1|CF282056 14ETL--09-G06.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--09-G06, mRNA sequence
Length = 578
Score = 533 bits (269), Expect = e-149
Identities = 471/537 (87%), Gaps = 6/537 (1%)
Strand = Plus / Plus
Query: 61 ccctagcgccgccgcacccgcagga---atgggtatcgacctcgtcgccggtgggaggaa 117
|||||||||||||||| | |||| | ||||||||||||||||| ||||| ||||||||
Sbjct: 42 ccctagcgccgccgcagcagcagcagccatgggtatcgacctcgttgccggcgggaggaa 101
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaa 177
|||||||| |||||||| ||||| | ||| |||||||||||||| ||||||||||||||
Sbjct: 102 caagaagacgaagcgcaccgcgccgaggtcggacgatgtctacctaaagctcctcgtcaa 161
Query: 178 gctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagag 237
||| ||||||||| |||| ||||| |||||||| || ||||| || || || ||||||||
Sbjct: 162 gctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaagag 221
Query: 238 gcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtcaagtttat 297
||| |||||||| || |||||||| || || ||||| |||||||||| | |||||| ||
Sbjct: 222 gctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttcat 281
Query: 298 ggaaggaaaggagaagaaca---ttgctgtcattgttggcacagtcacagatgacaaaag 354
|||||| |||||| |||||| ||||||| |||||||| |||||||| |||||||| ||
Sbjct: 282 ggaaggcaaggaggagaacaacattgctgtgattgttggtacagtcactgatgacaagag 341
Query: 355 gatccaggaggttccagcaatgaaggttactgccctgaggttcacggagacagcaagggc 414
|||||| ||| |||| ||||||||||||||||||||||||||||||||| || |||||
Sbjct: 342 gatccaagagattccgaaaatgaaggttactgccctgaggttcacggagacggctagggc 401
Query: 415 caggattgtcaatgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctcc 474
||||||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 402 aaggattgtcaatgctggcggcgagtgcctcaccttcgaccagcttgctctccgtgctcc 461
Query: 475 acttggcgagaacacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggca 534
||||| ||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 462 gcttggggagaacacggtcctcttgaggggtcccaagaatgcccgtgaggccgtcaggca 521
Query: 535 ctttggcaaggctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaa 591
|||||| ||||||||||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct: 522 ctttggtaaggctcctggtgtgccgcacagccacacgaagccatatgtgcgctccaa 578
>gb|CF310085.1|CF310085 ABF--04-J02.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--04-J02, mRNA sequence
Length = 581
Score = 533 bits (269), Expect = e-149
Identities = 468/533 (87%), Gaps = 6/533 (1%)
Strand = Plus / Plus
Query: 61 ccctagcgccgccgcacccgcagga---atgggtatcgacctcgtcgccggtgggaggaa 117
|||||||||||||||| | |||| | ||||||||||||||||| ||||| ||||||||
Sbjct: 49 ccctagcgccgccgcagcagcagcagccatgggtatcgacctcgttgccggcgggaggaa 108
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaa 177
|||||||| |||||||| ||||| | ||| |||||||||||||||||||||||||||||
Sbjct: 109 caagaagacgaagcgcaccgcgccgaggtcggacgatgtctacctcaagctcctcgtcaa 168
Query: 178 gctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagag 237
||| ||||||||| |||| ||||| |||||||| || ||||| || || || ||||||||
Sbjct: 169 gctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaagag 228
Query: 238 gcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtcaagtttat 297
||| |||||||| || |||||||| || || ||||| |||||||||| | |||||| ||
Sbjct: 229 gctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttcat 288
Query: 298 ggaaggaaaggagaagaaca---ttgctgtcattgttggcacagtcacagatgacaaaag 354
|||||| |||||| |||||| ||||||| |||||||| |||||||| |||||||| ||
Sbjct: 289 ggaaggcaaggaggagaacaacattgctgtgattgttggtacagtcactgatgacaagag 348
Query: 355 gatccaggaggttccagcaatgaaggttactgccctgaggttcacggagacagcaagggc 414
|||||| ||| |||| ||||||||||||||||||||||||||||||||| || |||||
Sbjct: 349 gatccaagagattccgaaaatgaaggttactgccctgaggttcacggagacggctagggc 408
Query: 415 caggattgtcaatgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctcc 474
||||||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 409 aaggattgtcaatgctggcggcgagtgcctcaccttcgaccagcttgctctccgtgctcc 468
Query: 475 acttggcgagaacacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggca 534
||||| ||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 469 gcttggggagaacacggtcctcttgaggggtcccaagaatgcccgtgaggccgtcaggca 528
Query: 535 ctttggcaaggctcctggagtgccgcacagccacaccaagccgtatgtgcgct 587
|||||| ||||||||||| ||||||||||||||||| ||||| ||||||||||
Sbjct: 529 ctttggtaaggctcctggtgtgccgcacagccacacgaagccatatgtgcgct 581
>gb|CF297823.1|CF297823 30DGS--08-O22.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--08-O22, mRNA sequence
Length = 570
Score = 527 bits (266), Expect = e-147
Identities = 468/534 (87%), Gaps = 6/534 (1%)
Strand = Plus / Plus
Query: 61 ccctagcgccgccgcacccgcagga---atgggtatcgacctcgtcgccggtgggaggaa 117
|||||||||||||||| | |||| | ||||||||||||||||| | ||| ||||||||
Sbjct: 37 ccctagcgccgccgcagcagcagcagccatgggtatcgacctcgttgtcggcgggaggaa 96
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaa 177
|||||||| |||||||| ||||| | ||| |||||||||||||||||||||||||||||
Sbjct: 97 caagaagacgaagcgcaccgcgccgaggtcggacgatgtctacctcaagctcctcgtcaa 156
Query: 178 gctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagag 237
||| ||||||||| |||| ||||| |||||||| || ||||| || || || ||||||||
Sbjct: 157 gctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaagag 216
Query: 238 gcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtcaagtttat 297
||| |||||||| || |||||||| || || ||||| |||||||||| | |||||| ||
Sbjct: 217 gctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttcat 276
Query: 298 ggaaggaaaggagaagaaca---ttgctgtcattgttggcacagtcacagatgacaaaag 354
|||||| |||||| |||||| ||||||| |||||||| |||||||| |||||||| ||
Sbjct: 277 ggaaggcaaggaggagaacaacattgctgtgattgttggtacagtcactgatgacaagag 336
Query: 355 gatccaggaggttccagcaatgaaggttactgccctgaggttcacggagacagcaagggc 414
|||||| ||| |||| ||||||||||||||||||||||||||||||||| || |||||
Sbjct: 337 gatccaagagattccgaaaatgaaggttactgccctgaggttcacggagacggctagggc 396
Query: 415 caggattgtcaatgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctcc 474
||||||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 397 aaggattgtcaatgctggcggcgagtgcctcaccttcgaccagcttgctctccgtgctcc 456
Query: 475 acttggcgagaacacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggca 534
||||| ||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 457 gcttggggagaacacggtcctcttgaggggtcccaagaatgcccgtgaggccgtcaggca 516
Query: 535 ctttggcaaggctcctggagtgccgcacagccacaccaagccgtatgtgcgctc 588
|||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||
Sbjct: 517 ctttggtaaggctcctggtgtgccgcacagccacacgaagccatatgtgcgctc 570
>gb|CF340548.1|CF340548 RCL1--08-F24.g1 Regenerated callus lambda phage cDNA library (RCL1)
Oryza sativa (japonica cultivar-group) cDNA clone
RCL1--08-F24, mRNA sequence
Length = 545
Score = 476 bits (240), Expect = e-131
Identities = 430/492 (87%), Gaps = 6/492 (1%)
Strand = Plus / Plus
Query: 61 ccctagcgccgccgcacccgcagga---atgggtatcgacctcgtcgccggtgggaggaa 117
|||||||||||||||| | |||| | ||||||||||||||||| ||||| ||||||||
Sbjct: 54 ccctagcgccgccgcagcagcagcagccatgggtatcgacctcgttgccggcgggaggaa 113
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaa 177
|||||||| |||||||| ||||| | ||| |||||||||||||||||||||||||||||
Sbjct: 114 caagaagacgaagcgcaccgcgccgaggtcggacgatgtctacctcaagctcctcgtcaa 173
Query: 178 gctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagag 237
||| ||||||||| |||| ||||| |||||||| || ||||| || || || ||||||||
Sbjct: 174 gctgtaccgtttcctggttaggagaaccaagagtaacttcaatgccgtgatcctcaagag 233
Query: 238 gcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtcaagtttat 297
||| |||||||| || |||||||| || || ||||| |||||||||| | |||||| ||
Sbjct: 234 gctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttcat 293
Query: 298 ggaaggaaaggagaagaaca---ttgctgtcattgttggcacagtcacagatgacaaaag 354
|||||| |||||| |||||| ||||||| |||||||| |||||||| |||||||| ||
Sbjct: 294 ggaaggcaaggaggagaacaacattgctgtgattgttggtacagtcactgatgacaagag 353
Query: 355 gatccaggaggttccagcaatgaaggttactgccctgaggttcacggagacagcaagggc 414
|||||| ||| |||| ||||||||||||||||||||||||||||||||| || |||||
Sbjct: 354 gatccaagagattccgaaaatgaaggttactgccctgaggttcacggagacggctagggc 413
Query: 415 caggattgtcaatgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctcc 474
||||||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 414 aaggattgtcaatgctggcggcgagtgcctcaccttcgaccagcttgctctccgtgctcc 473
Query: 475 acttggcgagaacacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggca 534
||||| ||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 474 gcttggggagaacacggtcctcttgaggggtcccaagaatgcccgtgaggccgtcaggca 533
Query: 535 ctttggcaaggc 546
|||||| |||||
Sbjct: 534 ctttggtaaggc 545
>gb|AU088579.1|AU088579 AU088579 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52717, mRNA sequence
Length = 674
Score = 472 bits (238), Expect = e-130
Identities = 375/419 (89%), Gaps = 4/419 (0%)
Strand = Plus / Plus
Query: 231 tcaagaggcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtca 290
|||| ||||| |||||||| || |||||||| || || ||||| |||||||||| | ||
Sbjct: 26 tcaanaggctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgcca 85
Query: 291 agtttatggaaggaaaggagaagaaca---ttgctgtcattgttggcacagtcacagatg 347
|||| |||||||| |||||| |||||| ||||||| |||||||| |||||||| ||||
Sbjct: 86 agttcatggaaggcaaggaggagaacaacattgctgtgattgttggtacagtcactgatg 145
Query: 348 acaaaaggatccaggaggttccagcaatgaaggttactgccctgaggttcacggagacag 407
|||| |||||||| ||| |||| ||||||||||||||||||||||||||||||||| |
Sbjct: 146 acaagaggatccaagagattccgaaaatgaaggttactgccctgaggttcacggagacgg 205
Query: 408 -caagggccaggattgtcaatgctggtggcgagtgcctcacatttgaccagcttgctctt 466
| ||||| ||||||||||||||||| |||||||||||||| || ||||||||||||||
Sbjct: 206 gctagggcaaggattgtcaatgctggcggcgagtgcctcaccttcgaccagcttgctctc 265
Query: 467 cgtgctccacttggcgagaacacggtcctcttgaggggccccaagaatgcccgtgaggca 526
|||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 266 cgtgctccgcttggggagaacacggtcctcttgaggggtcccaagaatgcccgtgaggcc 325
Query: 527 gtgaggcactttggcaaggctcctggagtgccgcacagccacaccaagccgtatgtgcgc 586
|| ||||||||||| ||||||||||| ||||||||||||||||| ||||| |||||||||
Sbjct: 326 gtcaggcactttggtaaggctcctggtgtgccgcacagccacacgaagccatatgtgcgc 385
Query: 587 tccaagggaaggaagttcgagaaggctcgtggcaggaggaacagccgtggattcaaggt 645
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 386 tccaagggaaggaagttcgagaaggcccgtggcaggaggaacagccgtggattcaaggt 444
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 668 gtgttgccatcagcatagtgcaaccgttgtgtttgatcagtcgacagtaattagtaatca 727
||||||| ||| |||| |||| |||||| ||||||| || |||||||||||||||| |||
Sbjct: 467 gtgttgcgatcggcattgtgcgaccgttctgtttgagcaatcgacagtaattagtagtca 526
Query: 728 ct 729
||
Sbjct: 527 ct 528
>gb|CF322760.1|CF322760 HDN--01-P22.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--01-P22, mRNA sequence
Length = 508
Score = 462 bits (233), Expect = e-127
Identities = 430/493 (87%), Gaps = 7/493 (1%)
Strand = Plus / Plus
Query: 61 ccctagcgccgccgcacccgcagga---atgggtatcgacctcgtcgccggtgggaggaa 117
|||||||||||||||| | |||| | ||||||||||||||||| ||||| ||||||||
Sbjct: 16 ccctagcgccgccgcagcagcagcagccatgggtatcgacctcgttgccggcgggaggaa 75
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaa 177
|||||||| |||||||| ||||| | ||| |||||||||||||||||||||||||||||
Sbjct: 76 caagaagacgaagcgcaccgcgccgaggtcggacgatgtctacctcaagctcctcgtcaa 135
Query: 178 gctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagag 237
||| ||||||||| |||| ||||| |||||||| || ||||| || || || ||||||||
Sbjct: 136 gctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaagag 195
Query: 238 gcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtcaagtttat 297
||| |||||||| || |||||||| || || ||||| |||||||||| | |||||| ||
Sbjct: 196 gctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttcat 255
Query: 298 ggaaggaaaggagaagaaca---ttgctgtcattgttggcacagtcacagatgacaaaag 354
|||||| |||||| |||||| ||||||| |||||||| |||||||| |||||||| ||
Sbjct: 256 ggaaggcaaggaggagaacaacattgctgtgattgttggtacagtcactgatgacaagag 315
Query: 355 gatccaggaggttccagcaatgaaggttactgccctgaggttcacggagacagcaagggc 414
|||||| ||| |||| ||||||||||||||||||||||||||||||||| || |||||
Sbjct: 316 gatccaagagattccgaaaatgaaggttactgccctgaggttcacggagacggctagggc 375
Query: 415 caggattgtcaatgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctcc 474
||||||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 376 aaggattgtcaatgctggcggcgagtgcctcaccttcgaccagcttgctctccgtgctcc 435
Query: 475 acttggcgagaacacggtcc-tcttgaggggccccaagaatgcccgtgaggcagtgaggc 533
||||| ||||||||||||| |||||||||| |||||||||||||||||||| || ||||
Sbjct: 436 gcttggggagaacacggtccntcttgaggggtcccaagaatgcccgtgaggccgtcaggc 495
Query: 534 actttggcaaggc 546
||||||| |||||
Sbjct: 496 actttggtaaggc 508
>gb|CD670723.1|CD670723 OsMR139 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 538
Score = 458 bits (231), Expect = e-126
Identities = 312/339 (92%)
Strand = Plus / Plus
Query: 307 ggagaagaacattgctgtcattgttggcacagtcacagatgacaaaaggatccaggaggt 366
|||||| ||||||||||| |||||||| |||||||| |||||||| |||||||| ||| |
Sbjct: 55 ggagaacaacattgctgtgattgttggtacagtcactgatgacaagaggatccaagagat 114
Query: 367 tccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtcaa 426
||| ||||||||||||||||||||||||||||||||| || ||||| |||||||||||
Sbjct: 115 tccgaaaatgaaggttactgccctgaggttcacggagacggctagggcaaggattgtcaa 174
Query: 427 tgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaa 486
|||||| |||||||||||||| || |||||||||||||| |||||||| ||||| |||||
Sbjct: 175 tgctggcggcgagtgcctcaccttcgaccagcttgctctccgtgctccgcttggggagaa 234
Query: 487 cacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggc 546
|||||||||||||||||| |||||||||||||||||||| || ||||||||||| |||||
Sbjct: 235 cacggtcctcttgaggggtcccaagaatgcccgtgaggccgtcaggcactttggtaaggc 294
Query: 547 tcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcga 606
|||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 295 tcctggtgtgccgcacagccacacgaagccatatgtgcgctccaagggaaggaagttcga 354
Query: 607 gaaggctcgtggcaggaggaacagccgtggattcaaggt 645
|||||| ||||||||||||||||||||||||||||||||
Sbjct: 355 gaaggcccgtggcaggaggaacagccgtggattcaaggt 393
>gb|CB000150.1|CB000150 S345X_E10 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 494
Score = 454 bits (229), Expect = e-125
Identities = 390/443 (88%), Gaps = 3/443 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
||||||||||||||||| ||||| |||||||| |||||||| |||||||| ||||| | |
Sbjct: 52 atgggtatcgacctcgttgccggcgggaggaacaagaagacgaagcgcaccgcgccgagg 111
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| |||||||||||||||||||||||||||||||| ||||||||| |||| ||||| |||
Sbjct: 112 tcggacgatgtctacctcaagctcctcgtcaagctgtaccgtttcctggtgaggagaacc 171
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
||||| || ||||| || || || ||||||||||| |||||||| || |||||||| ||
Sbjct: 172 aagagtaacttcaatgccgtgatcctcaagaggctcttcatgagcaagaccaaccgcccg 231
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaaaggagaagaaca---ttgct 322
|| ||||| |||||||||| | |||||| |||||||| |||||| |||||| |||||
Sbjct: 232 ccgctctccctgcgccgcctcgccaagttcatggaaggcaaggaggagaacaacattgct 291
Query: 323 gtcattgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggtt 382
|| |||||||| |||||||| |||||||| |||||||| ||| |||| ||||||||||
Sbjct: 292 gtgattgttggtacagtcactgatgacaagaggatccaagagattccgaaaatgaaggtt 351
Query: 383 actgccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgc 442
||||||||||||||||||||||| || ||||| ||||||||||||||||| |||||||||
Sbjct: 352 actgccctgaggttcacggagacggctagggcaaggattgtcaatgctggcggcgagtgc 411
Query: 443 ctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagg 502
||||| || |||||||||||||| |||||||| ||||| |||||||||||||||||||||
Sbjct: 412 ctcaccttcgaccagcttgctctccgtgctccgcttggggagaacacggtcctcttgagg 471
Query: 503 ggccccaagaatgcccgtgaggc 525
|| ||||||||||||||||||||
Sbjct: 472 ggtcccaagaatgcccgtgaggc 494
>gb|CF329309.1|CF329309 NACL--04-J11.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--04-J11, mRNA sequence
Length = 534
Score = 452 bits (228), Expect = e-124
Identities = 312/340 (91%)
Strand = Plus / Minus
Query: 306 aggagaagaacattgctgtcattgttggcacagtcacagatgacaaaaggatccaggagg 365
||||||| ||||||||||| |||||||| |||||||| |||||||| ||||||| |||
Sbjct: 513 aggagaacaacattgctgtgattgttggtacagtcactgatgacaagaggatccgagaga 454
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
|||| ||||||||||||||||||||||||||||||||| || ||||| ||||||||||
Sbjct: 453 ttccgaaaatgaaggttactgccctgaggttcacggagacggctagggcaaggattgtca 394
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
||||||| |||||||||||||| || |||||||||||||| |||||||| ||||| ||||
Sbjct: 393 atgctggcggcgagtgcctcaccttcgaccagcttgctctccgtgctccgcttggggaga 334
Query: 486 acacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaagg 545
||||||||||||||||||| |||||||||||||||||||| || ||||||||||| ||||
Sbjct: 333 acacggtcctcttgaggggtcccaagaatgcccgtgaggccgtcaggcactttggtaagg 274
Query: 546 ctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcg 605
||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 273 ctcctggtgtgccgcacagccacacgaagccatatgtgcgctccaagggaaggaagttcg 214
Query: 606 agaaggctcgtggcaggaggaacagccgtggattcaaggt 645
||||||| ||||||||||||||||||||||||||||||||
Sbjct: 213 agaaggcccgtggcaggaggaacagccgtggattcaaggt 174
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 668 gtgttgccatcagcatagtgcaaccgttgtgtttgatcagtcgacagtaattagtaatca 727
||||||| ||| |||| |||| |||||| ||||||| || |||||||||||||||| |||
Sbjct: 151 gtgttgcgatcggcattgtgcgaccgttctgtttgagcaatcgacagtaattagtagtca 92
Query: 728 ct 729
||
Sbjct: 91 ct 90
>gb|AU095900.1|AU095900 AU095900 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11476, mRNA sequence
Length = 628
Score = 446 bits (225), Expect = e-123
Identities = 312/340 (91%), Gaps = 1/340 (0%)
Strand = Plus / Plus
Query: 306 aggagaagaacattgctgtcattgttggcacagtcacagatgacaaaaggatccaggagg 365
||||||| ||||||||||| |||||||| |||||||| |||||||| |||||||| |||
Sbjct: 35 aggagaacaacattgctgtgattgttggtacagtcactgatgacaagaggatccaagaga 94
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
|||| ||||||||||||||||||||||||||||||||| || ||||| ||||||||||
Sbjct: 95 ttccgaaaatgaaggttactgccctgaggttcacggagacggctagggcaaggattgtca 154
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
||||||| |||||||||||||| || |||||||||||||| |||| ||| ||||| ||||
Sbjct: 155 atgctggcggcgagtgcctcaccttcgaccagcttgctctccgtg-tccgcttggggaga 213
Query: 486 acacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaagg 545
||||||||||||||||||| |||||||||||||||||||| || ||||||||||| ||||
Sbjct: 214 acacggtcctcttgaggggtcccaagaatgcccgtgaggccgtnaggcactttggtaagg 273
Query: 546 ctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcg 605
||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 274 ctcctggtgtgccgcacagccacacgaagccatatgtgcgctccaagggaaggaagttcg 333
Query: 606 agaaggctcgtggcaggaggaacagccgtggattcaaggt 645
||||||| ||||||||||||||||||||||||||||||||
Sbjct: 334 agaaggcccgtggcaggaggaacagccgtggattcaaggt 373
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 668 gtgttgccatcagcatagtgcaaccgttgtgtttgatcagtcgacagtaattagtaatca 727
||||||| ||| |||| |||| |||||| ||||||| || |||||||||||||||| |||
Sbjct: 396 gtgttgcgatcggcattgtgcgaccgttctgtttgagcaatcgacagtaattagtagtca 455
Query: 728 ct 729
||
Sbjct: 456 ct 457
>gb|CF282057.1|CF282057 14ETL--09-G06.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--09-G06, mRNA sequence
Length = 591
Score = 444 bits (224), Expect = e-122
Identities = 311/340 (91%)
Strand = Plus / Minus
Query: 306 aggagaagaacattgctgtcattgttggcacagtcacagatgacaaaaggatccaggagg 365
||||||| ||||||||||| |||||||| |||||||| |||||||| |||||||| |||
Sbjct: 561 aggagaacaacattgctgtgattgttggtacagtcactgatgacaagaggatccaagaga 502
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
|||| ||||||||||||||||||||||||||||||||| || ||||| ||||||||||
Sbjct: 501 ttccgaaaatgaaggttactgccctgaggttcacggagacggctagggcaaggattgtca 442
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
||||||| |||||||||||||| || |||||||||||| | |||||||| ||||| ||||
Sbjct: 441 atgctggcggcgagtgcctcaccttggaccagcttgctatccgtgctccgcttggggaga 382
Query: 486 acacggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaagg 545
||||||||||||||||||| |||||||||||||||||||| || ||||||||||| ||||
Sbjct: 381 acacggtcctcttgaggggtcccaagaatgcccgtgaggccgtcaggcactttggtaagg 322
Query: 546 ctcctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcg 605
||||||| ||||||||||||||| | ||||| ||||||||||||||||||||||||||||
Sbjct: 321 ctcctggtgtgccgcacagccacccgaagccatatgtgcgctccaagggaaggaagttcg 262
Query: 606 agaaggctcgtggcaggaggaacagccgtggattcaaggt 645
||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 agaaggcccgtggcaggaggaacagccgtggattcaaggt 222
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 668 gtgttgccatcagcatagtgcaaccgttgtgtttgatcagtcgacagtaattagtaatca 727
||||||| ||| |||| |||| |||||| ||||||| || |||||||||||||||| |||
Sbjct: 199 gtgttgcgatcggcattgtgcgaccgttctgtttgagcaatcgacagtaattagtagtca 140
Query: 728 ct 729
||
Sbjct: 139 ct 138
>gb|CF320096.1|CF320096 HD--10-N13.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--10-N13, mRNA sequence
Length = 487
Score = 392 bits (198), Expect = e-106
Identities = 382/442 (86%), Gaps = 6/442 (1%)
Strand = Plus / Plus
Query: 61 ccctagcgccgccgcacccgcagga---atgggtatcgacctcgtcgccggtgggaggaa 117
|||||||||||||||| | |||| | ||||||||||||||||| ||||| ||||||||
Sbjct: 46 ccctagcgccgccgcagcagcagcagccatgggtatcgacctcgttgccggcgggaggaa 105
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaa 177
|||||||| |||||||| |||| | ||| |||||||||||||||||||||||||||||
Sbjct: 106 caagaagacgaagcgcaccgcgctgaggtcggacgatgtctacctcaagctcctcgtcaa 165
Query: 178 gctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagag 237
||| ||||||||| |||| ||||| |||||||| || ||||| || || || |||||||
Sbjct: 166 gctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaagaa 225
Query: 238 gcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtcaagtttat 297
||| |||||||| || |||||||| || || ||||| |||||||||| | |||||| ||
Sbjct: 226 gctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttcat 285
Query: 298 ggaaggaaaggagaagaaca---ttgctgtcattgttggcacagtcacagatgacaaaag 354
|||||| |||||| |||||| ||||||| |||||||| |||||||| |||||||| ||
Sbjct: 286 ggaaggcaaggaggagaacaacattgctgtgattgttggtacagtcactgatgacaagag 345
Query: 355 gatccaggaggttccagcaatgaaggttactgccctgaggttcacggagacagcaagggc 414
|||||| ||| |||| ||||||||||||||||||||||||||||||||| || |||||
Sbjct: 346 gatccaagagattccgaaaatgaaggttactgccctgaggttcacggagacggctagggc 405
Query: 415 caggattgtcaatgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctcc 474
||||||||||||||||| |||||||||||||| || |||||||||||||| ||||||||
Sbjct: 406 aaggattgtcaatgctggcggcgagtgcctcaccttcgaccagcttgctctccgtgctcc 465
Query: 475 acttggcgagaacacggtcctc 496
||||| |||||||||||||||
Sbjct: 466 gcttggggagaacacggtcctc 487
>gb|AU062406.1|AU062406 AU062406 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C10517_5A, mRNA sequence
Length = 423
Score = 355 bits (179), Expect = 3e-095
Identities = 355/411 (86%), Gaps = 7/411 (1%)
Strand = Plus / Plus
Query: 61 ccctagcgccgccgcacccgcagga---atgggtatcgacctcgtcgccggtgggaggaa 117
|||||||||||||||| | |||| | ||||||||||||||||| ||||| ||||||||
Sbjct: 11 ccctagcgccgccgcagcagcagcagccatgggtatcgacctcgttgccggcgggaggaa 70
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaa 177
|||||||| |||||||| || || | ||| |||||||||||||||||||||||||||||
Sbjct: 71 caagaagacgaagcgcaccgc-ccgaggtcggacgatgtctacctcaagctcctcgtcaa 129
Query: 178 gctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagag 237
||| ||||||||| |||| ||||| |||||||| || ||||| || || || ||||||||
Sbjct: 130 gctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaagag 189
Query: 238 gcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtcaagtttat 297
||| |||||||| || |||||||| || || ||||| |||||||||| | |||||| ||
Sbjct: 190 gctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttcat 249
Query: 298 ggaaggaaaggagaagaaca---ttgctgtcattgttggcacagtcacagatgacaaaag 354
|||||| |||||| |||||| ||||||| |||||||| |||||||| |||||||| ||
Sbjct: 250 ggaaggcaaggaggagaacaacattgctgtgattgttggtacagtcactgatgacaagag 309
Query: 355 gatccaggaggttccagcaatgaaggttactgccctgaggttcacggagacagcaagggc 414
|||||| ||| |||| ||||||||||||||||||||||||||||||||| || |||||
Sbjct: 310 gatccaagagattccgaaaatgaaggttactgccctgaggttcacggagacggctagggc 369
Query: 415 caggattgtcaatgctggtggcgagtgcctcacatttgaccagcttgctct 465
||||||||||||||||| |||||||||||||| || ||||||||||||||
Sbjct: 370 aaggattgtcaatgctggcggcgagtgcctcaccttcgaccagcttgctct 420
>gb|AU063056.2|AU063056 AU063056 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52717_5A, mRNA sequence
Length = 465
Score = 355 bits (179), Expect = 3e-095
Identities = 391/454 (86%), Gaps = 11/454 (2%)
Strand = Plus / Plus
Query: 61 ccctagcgccgccgcacccgcagga---atgggtatcgacctcgtcgccggtgggaggaa 117
|||||||||||||||| | |||| | ||||||||||||||||| ||||| ||||||||
Sbjct: 9 ccctagcgccgccgcagcagcagcagccatgggtatcgacctcgttgccggcgggaggaa 68
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaa 177
|||||||| |||||||| | | | | ||| |||||||||||||||||||||||||||||
Sbjct: 69 caagaagacgaagcgcaccg-gncgaggtcggacgatgtctacctcaagctcctcgtcaa 127
Query: 178 gctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagag 237
||| ||||||||| |||| ||||| |||||||| || ||||| || || || ||||||||
Sbjct: 128 gctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaagag 187
Query: 238 gcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtcaagtttat 297
||| |||||||| || |||||||| || || ||||| |||||||||| | |||||| ||
Sbjct: 188 gctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttcat 247
Query: 298 ggaaggaa---aggagaagaacattgctgtcattgttggcacagtcacagatgacaaaag 354
|||||| | ||||||| ||||||||||| |||||||| |||||||| |||||||| ||
Sbjct: 248 ggaaggcaaggaggagaacaacattgctgtgattgttggtacagtcactgatgacaagag 307
Query: 355 gatccaggaggttccagcaatgaaggttactgccctgaggttcacggagacagcaagggc 414
|||||| ||| |||| ||||||||||||||||||||||||||||||||| || |||||
Sbjct: 308 gatccaagagattccgaaaatgaaggttactgccctgaggttcacggagacggctagggc 367
Query: 415 caggattg-tcaatgctggtggcgagtgcctcacattt-gaccagcttgctctt-cgtgc 471
||| ||| |||||||||| |||||||||||||| ||| ||||||||||||||| |||||
Sbjct: 368 aaggtttgttcaatgctggcggcgagtgcctcacctttcgaccagcttgctcttccgtgc 427
Query: 472 -tccacttggcgagaacacggtcctcttgagggg 504
||| ||||| |||||||||||||||||||||||
Sbjct: 428 ttccgcttggggagaacacggtcctcttgagggg 461
>gb|AU182776.1|AU182776 AU182776 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30924, mRNA sequence
Length = 444
Score = 321 bits (162), Expect = 4e-085
Identities = 206/221 (93%)
Strand = Plus / Plus
Query: 429 ctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaaca 488
|||| |||||||||||||| || |||||||||||||| |||||||| ||||| |||||||
Sbjct: 1 ctggcggcgagtgcctcaccttcgaccagcttgctctccgtgctccgcttggggagaaca 60
Query: 489 cggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctc 548
|||||||||||||||| |||||||||||||||||||| || ||||||||||| |||||||
Sbjct: 61 cggtcctcttgaggggtcccaagaatgcccgtgaggccgtcaggcactttggtaaggctc 120
Query: 549 ctggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgaga 608
|||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 121 ctggtgtgccgcacagccacacgaagccatatgtgcgctccaagggaaggaagttcgaga 180
Query: 609 aggctcgtggcaggaggaacagccgtggattcaaggtttaa 649
|||| |||||||||||||||||||||||||||||||| |||
Sbjct: 181 aggcccgtggcaggaggaacagccgtggattcaaggtntaa 221
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 668 gtgttgccatcagcatagtgcaaccgttgtgtttgatcagtcgacagtaattagtaatca 727
||||||| ||| |||| |||| |||||| ||||||| || |||||||||||||||| |||
Sbjct: 240 gtgttgcgatcggcattgtgcgaccgttctgtttgagcaatcgacagtaattagtagtca 299
Query: 728 ct 729
||
Sbjct: 300 ct 301
>gb|CV721809.1|CV721809 YBH--05-G12.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--05-G12, mRNA sequence
Length = 456
Score = 317 bits (160), Expect = 6e-084
Identities = 199/212 (93%)
Strand = Plus / Minus
Query: 434 ggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtc 493
|||||||||||||| || |||||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 454 ggcgagtgcctcaccttcgaccagcttgctctccgtgctccgcttggggagaacacggtc 395
Query: 494 ctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctgga 553
||||||||||| |||||||||||||||||||| || ||||||||||| |||||||||||
Sbjct: 394 ctcttgaggggtcccaagaatgcccgtgaggccgtcaggcactttggtaaggctcctggt 335
Query: 554 gtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggct 613
||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 334 gtgccgcacagccacacgaagccatatgtgcgctccaagggaaggaagttcgagaaggcc 275
Query: 614 cgtggcaggaggaacagccgtggattcaaggt 645
||||||||||||||||||||||||||||||||
Sbjct: 274 cgtggcaggaggaacagccgtggattcaaggt 243
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 668 gtgttgccatcagcatagtgcaaccgttgtgtttgatcagtcgacagtaattagtaatca 727
||||||| ||| |||| |||| |||||| ||||||| || |||||||||||||||| |||
Sbjct: 220 gtgttgcgatcggcattgtgcgaccgttctgtttgagcaatcgacagtaattagtagtca 161
Query: 728 ct 729
||
Sbjct: 160 ct 159
>gb|D24909.1|D24909 RICR2751A Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2751_1A, mRNA sequence
Length = 298
Score = 268 bits (135), Expect = 5e-069
Identities = 242/278 (87%), Gaps = 3/278 (1%)
Strand = Plus / Plus
Query: 230 ctcaagaggcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtc 289
||||||||||| |||||||| || |||||||| || || ||||| |||||||||| | |
Sbjct: 19 ctcaagaggctcttcatgagcaagaccaaccgnccgccgctctccctgcgccgcctcgcc 78
Query: 290 aagtttatggaaggaaaggagaagaaca---ttgctgtcattgttggcacagtcacagat 346
||||| |||||||| |||||| |||||| ||||||| |||||||| |||||||| |||
Sbjct: 79 aagttcatggaaggcaaggaggagaacaacattgctgtgattgttggtacagtcactgat 138
Query: 347 gacaaaaggatccaggaggttccagcaatgaaggttactgccctgaggttcacggagaca 406
||||| |||||||| ||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 139 gacaagaggatccaagagattccgaaaatgaaggttactgccctgaggttcacggagacg 198
Query: 407 gcaagggccaggattgtcaatgctggtggcgagtgcctcacatttgaccagcttgctctt 466
|| ||||| |||||||||||| |||| ||||||| |||||| || ||||||||||||||
Sbjct: 199 gctagggcaaggattgtcaatnctggcggcgagtncctcaccttcgaccagcttgctctc 258
Query: 467 cgtgctccacttggcgagaacacggtcctcttgagggg 504
|||||||| ||||| |||||||||||||||||||||||
Sbjct: 259 cgtgctccgcttggggagaacacggtcctcttgagggg 296
>gb|D38863.1|D38863 RICC1763A Rice callus Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 346
Score = 262 bits (132), Expect = 3e-067
Identities = 286/336 (85%), Gaps = 6/336 (1%)
Strand = Plus / Plus
Query: 61 ccctagcgccgccgcacccgcagga---atgggtatcgacctcgtcgccggtgggaggaa 117
|||||||||||||||| | |||| | ||||||||||||||||| ||||| ||||||||
Sbjct: 11 ccctagcgccgccgcagcagcagcagccatgggtatcgacctcgttgccggcgggaggaa 70
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaa 177
|||||||| |||||||| |||| | ||| |||||||||||||||||||||||||||||
Sbjct: 71 caagaagacgaagcgcaccgcgcggaggtcggacgatgtctacctcaagctcctcgtcaa 130
Query: 178 gctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagag 237
||| ||||||||| |||| ||||| |||||||| || ||||| || || || ||||||||
Sbjct: 131 gctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaagag 190
Query: 238 gcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtcaagtttat 297
||| |||||||| || |||||||| || || ||||| |||||||||| | |||||| ||
Sbjct: 191 gctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttcat 250
Query: 298 ggaaggaa---aggagaagaacattgctgtcattgttggcacagtcacagatgacaaaag 354
|||||| | ||||||| ||||||||||| |||||||| |||||||| |||||||| ||
Sbjct: 251 ggaaggcaaggaggagaacaacattgctgtgattgttggtacagtcactgatgacaagag 310
Query: 355 gatccaggaggttccagcaatgaaggttactgccct 390
|||||| ||| |||| ||||||||||||||||||
Sbjct: 311 gatccaagagattccgaaaatgaaggttactgccct 346
>gb|CV732089.1|CV732089 FLO--06-G14.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--06-G14,
mRNA sequence
Length = 526
Score = 262 bits (132), Expect = 3e-067
Identities = 354/428 (82%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
||||||||||||||||||||||| || |||| ||||||||||||||||| ||||||| |
Sbjct: 97 atgggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcccagg 156
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| || |||||||||||||||||| |||||||||||||||| ||| |||| ||||||||
Sbjct: 157 tccgaggatgtctacctcaagctcatcgtcaagctctaccgcttcctggtgcggaggacc 216
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||| | |||||||| || || || ||| |||| |||||||| || |||||||| ||
Sbjct: 217 aagagccacttcaacgccgtgatcctgaagcggctcttcatgagcaagaccaaccgcccg 276
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaaaggagaagaacattgctgtc 325
|| |||| |||||||| || |||| ||| ||||| || |||| | | | || || ||
Sbjct: 277 ccgctctcgatgcgccgtctcgtcaggttcatggaggggaagggggaccagatcgccgtg 336
Query: 326 attgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttact 385
|| || ||||| |||||||||||||| |||||| | ||||| || || |||||||| ||
Sbjct: 337 atcgtgggcaccgtcacagatgacaagaggatctatgaggtgccggcgatgaaggtggct 396
Query: 386 gccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgcctc 445
|| || |||||||| ||||| || || || |||| ||||||| |||||||||||||||
Sbjct: 397 gctctcaggttcaccgagaccgcgagagcacggatcatcaatgccggtggcgagtgcctc 456
Query: 446 acatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggggc 505
|| || |||||||| ||||| || || || |||||| |||||||||||||| |||||||
Sbjct: 457 acgttcgaccagctcgctctccgcgccccgcttggccagaacacggtcctcctgaggggt 516
Query: 506 cccaagaa 513
||||||||
Sbjct: 517 cccaagaa 524
>gb|CV724476.1|CV724476 14Salt--01-B05.b1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--01-B05, mRNA sequence
Length = 548
Score = 260 bits (131), Expect = 1e-066
Identities = 353/427 (82%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
||||||||||||||||||||||| || |||| ||||||||||||||||| ||||||| |
Sbjct: 122 atgggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcccagg 181
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| || |||||||||||||||||| |||||||||||||||| ||| |||| ||||||||
Sbjct: 182 tccgaggatgtctacctcaagctcatcgtcaagctctaccgcttcctggtgcggaggacc 241
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||| | |||||||| || || || ||| |||| |||||||| || |||||||| ||
Sbjct: 242 aagagccacttcaacgccgtgatcctgaagcggctcttcatgagcaagaccaaccgcccg 301
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaaaggagaagaacattgctgtc 325
|| |||| |||||||| || |||| ||| ||||| || |||| | | | || || ||
Sbjct: 302 ccgctctcgatgcgccgtctcgtcaggttcatggaggggaagggggaccagatcgccgtg 361
Query: 326 attgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttact 385
|| || ||||| |||||||||||||| |||||| | ||||| || || |||||||| ||
Sbjct: 362 atcgtgggcaccgtcacagatgacaagaggatctatgaggtgccggcgatgaaggtggct 421
Query: 386 gccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgcctc 445
|| || |||||||| ||||| || || || |||| ||||||| |||||||||||||||
Sbjct: 422 gctctcaggttcaccgagaccgcgagagcacggatcatcaatgccggtggcgagtgcctc 481
Query: 446 acatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggggc 505
|| || |||||||| ||||| || || || |||||| |||||||||||||| |||||||
Sbjct: 482 acgttcgaccagctcgctctccgcgccccgcttggccagaacacggtcctcctgaggggt 541
Query: 506 cccaaga 512
|||||||
Sbjct: 542 cccaaga 548
>gb|D46667.1|D46667 RICS11476A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 334
Score = 254 bits (128), Expect = 7e-065
Identities = 283/335 (84%), Gaps = 4/335 (1%)
Strand = Plus / Plus
Query: 90 gtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaagtctg 149
||||||||||||| ||||| |||||||| |||||||| |||||||| | ||| | ||| |
Sbjct: 1 gtatcgacctcgttgccggcgggaggaacaagaagacgaagcgcaccg-gccgaggtcgg 59
Query: 150 acgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggaccaaga 209
||||||||||||||||||||||||||||||| ||||||||| |||| ||||| |||||||
Sbjct: 60 acgatgtctacctcaagctcctcgtcaagctgtaccgtttcctggtgaggagaaccaaga 119
Query: 210 gcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgaccaccaa 269
| || ||||| || || || ||||||||||| |||||||| || |||||||| || ||
Sbjct: 120 gtaacttcaatgccgtnatcctcaagaggctcttcatgagcaagaccaaccggccgccgn 179
Query: 270 tctccatgcgccgccttgtcaagtttatggaaggaa---aggagaagaacattgctgtca 326
||||| | ||||| || | |||||| |||||||| | ||||||| |||||| |||| |
Sbjct: 180 tctccctncgccggctcgncaagttcatggaaggcaaggaggagaacaacattnctgtna 239
Query: 327 ttgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttactg 386
||||||| |||||||| |||||||| |||||||| ||| |||| |||||||||||||
Sbjct: 240 ttgttggtacagtcactgatgacaagaggatccaagagattccgaaaatgaaggttactn 299
Query: 387 ccctgaggttcacggagacagcaagggccaggatt 421
|||| |||||||||||||| || ||||| ||||||
Sbjct: 300 cccttaggttcacggagacggctagggcaaggatt 334
>dbj|AK121580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037B18, full
insert sequence
Length = 769
Score = 250 bits (126), Expect = 1e-063
Identities = 442/546 (80%), Gaps = 1/546 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
||||||||||||||||||||||| || |||| ||||||||||||||||| ||||| |||
Sbjct: 45 atgggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcc-aag 103
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| ||||||||||||||||||||| |||||||||||||||| ||| |||| ||||||||
Sbjct: 104 tccgacgatgtctacctcaagctcatcgtcaagctctaccgcttcctggtgcggaggacc 163
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||| |||||||| || || || | | |||| |||||||| || |||||||| ||
Sbjct: 164 aagagccccttcaacgccgtgatcctgaggcggctcttcatgagcaagaccaaccgcccg 223
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaaaggagaagaacattgctgtc 325
|| |||| | |||||||| |||| ||| |||| || |||||||| | || || ||
Sbjct: 224 ccgctctcgctccgccgcctcgtcaggttcgtggagggcaaggagaaccagatcgccgtg 283
Query: 326 attgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttact 385
|| || ||||| || || || ||||| ||| || | ||||| || || |||||||| |
Sbjct: 284 atcgtgggcaccgttaccgacgacaagagggtctacgaggtgccggcgatgaaggtggcc 343
Query: 386 gccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgcctc 445
|| || |||||||| ||||| || ||||| | ||||| ||| ||||||| ||||||||
Sbjct: 344 gcgctcaggttcaccgagaccgcgagggctcgcattgtgaatactggtggagagtgcctt 403
Query: 446 acatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggggc 505
|| || || ||||| || || || ||||| || ||| |||||||||| ||| |||||||
Sbjct: 404 accttcgatcagctggcgctccgcgctcctctgggccagaacacggttctcctgaggggt 463
Query: 506 cccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcacagc 565
|| ||||| ||| | || ||||||| ||||||||| |||||||||||||| ||||||
Sbjct: 464 cctaagaacgccagggaagcagtgaagcactttggtcctgctcctggagtgccacacagc 523
Query: 566 cacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtggcaggagg 625
|||||||||| || |||||||| |||||||||||||| |||||||| | || ||||||
Sbjct: 524 aacaccaagccttacgtgcgctcaaagggaaggaagtttgagaaggcgagaggaaggagg 583
Query: 626 aacagc 631
||||||
Sbjct: 584 aacagc 589
>gb|C74736.1|C74736 C74736 Rice cDNA from immature leaf including apical meristem Oryza
sativa (japonica cultivar-group) cDNA clone E50731_1A,
mRNA sequence
Length = 358
Score = 246 bits (124), Expect = 2e-062
Identities = 296/350 (84%), Gaps = 8/350 (2%)
Strand = Plus / Plus
Query: 61 ccctagcgccgccgcacccgcagga---atgggtatcgacctcgtcgccggtgggaggaa 117
|||||||||||||||| | |||| | ||||||||||||||||| ||||| ||||||||
Sbjct: 9 ccctagcgccgccgcagcagcagcagccatgggtatcgacctcgttgccggcgggaggaa 68
Query: 118 taagaagaccaagcgcactgcgcccaagtctgacgatgtctacctcaagctcctcgtcaa 177
|||||||| |||||||| || || | ||| |||||||||||||||||||||||||||||
Sbjct: 69 caagaagacgaagcgcaccgccccgaggtcggacgatgtctacctcaagctcctcgtcaa 128
Query: 178 gctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaagag 237
||| ||||||||| |||| ||||| |||||||| || ||||| || || || ||||||||
Sbjct: 129 gctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaagag 188
Query: 238 gcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtcaagtttat 297
||| |||||||| || |||||||| || || ||||| |||||||||| | |||||| ||
Sbjct: 189 gctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttcat 248
Query: 298 ggaaggaa---aggagaagaacattgctgtcattgttggcacagtcac-agatgacaaaa 353
|||||| | ||||||| ||||||||||| |||||||| |||||||| |||||||| |
Sbjct: 249 ggaaggcaaggaggagaacaacattgctgtgattgttggtacagtcacttgatgacaaga 308
Query: 354 ggatccaggaggttccag-caatgaaggttactgccctgaggttcacgga 402
||||||| ||| |||| | |||||||||||||| ||| | |||||||||
Sbjct: 309 ggatccaagagattccggaaaatgaaggttactgnccttangttcacgga 358
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05,
complete sequence
Length = 145044
Score = 246 bits (124), Expect = 2e-062
Identities = 148/156 (94%)
Strand = Plus / Plus
Query: 490 ggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcc 549
||||||||||||||| |||||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 49717 ggtcctcttgaggggtcccaagaatgcccgtgaggccgtcaggcactttggtaaggctcc 49776
Query: 550 tggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaa 609
||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 49777 tggtgtgccgcacagccacacgaagccatatgtgcgctccaagggaaggaagttcgagaa 49836
Query: 610 ggctcgtggcaggaggaacagccgtggattcaaggt 645
||| ||||||||||||||||||||||||||||||||
Sbjct: 49837 ggcccgtggcaggaggaacagccgtggattcaaggt 49872
Score = 220 bits (111), Expect = 1e-054
Identities = 168/187 (89%)
Strand = Plus / Plus
Query: 306 aggagaagaacattgctgtcattgttggcacagtcacagatgacaaaaggatccaggagg 365
||||||| ||||||||||| |||||||| |||||||| |||||||| |||||||| |||
Sbjct: 48532 aggagaacaacattgctgtgattgttggtacagtcactgatgacaagaggatccaagaga 48591
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
|||| ||||||||||||||||||||||||||||||||| || ||||| ||||||||||
Sbjct: 48592 ttccgaaaatgaaggttactgccctgaggttcacggagacggctagggcaaggattgtca 48651
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
||||||| |||||||||||||| || |||||||||||||| |||||||| ||||| ||||
Sbjct: 48652 atgctggcggcgagtgcctcaccttcgaccagcttgctctccgtgctccgcttggggaga 48711
Query: 486 acacggt 492
|||||||
Sbjct: 48712 acacggt 48718
Score = 117 bits (59), Expect = 1e-023
Identities = 83/91 (91%)
Strand = Plus / Plus
Query: 88 gggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaagtc 147
||||||||||||||| ||||| |||||||| |||||||| |||||||| ||||| | |||
Sbjct: 47787 gggtatcgacctcgttgccggcgggaggaacaagaagacgaagcgcaccgcgccgaggtc 47846
Query: 148 tgacgatgtctacctcaagctcctcgtcaag 178
||||||||||||||||||||||||||||||
Sbjct: 47847 ggacgatgtctacctcaagctcctcgtcaag 47877
Score = 87.7 bits (44), Expect = 1e-014
Identities = 110/132 (83%)
Strand = Plus / Plus
Query: 177 agctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaaga 236
|||| ||||||||| |||| ||||| |||||||| || ||||| || || || |||||||
Sbjct: 48271 agctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaaga 48330
Query: 237 ggcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtcaagttta 296
|||| |||||||| || |||||||| || || ||||| |||||||||| | |||||| |
Sbjct: 48331 ggctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttca 48390
Query: 297 tggaaggaaagg 308
||||||| ||||
Sbjct: 48391 tggaaggcaagg 48402
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 668 gtgttgccatcagcatagtgcaaccgttgtgtttgatcagtcgacagtaattagtaatca 727
||||||| ||| |||| |||| |||||| ||||||| || |||||||||||||||| |||
Sbjct: 49895 gtgttgcgatcggcattgtgcgaccgttctgtttgagcaatcgacagtaattagtagtca 49954
Query: 728 ct 729
||
Sbjct: 49955 ct 49956
>gb|AACV01010916.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg010916, whole
genome shotgun sequence
Length = 44444
Score = 246 bits (124), Expect = 2e-062
Identities = 148/156 (94%)
Strand = Plus / Plus
Query: 490 ggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcc 549
||||||||||||||| |||||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 6773 ggtcctcttgaggggtcccaagaatgcccgtgaggccgtcaggcactttggtaaggctcc 6832
Query: 550 tggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaa 609
||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 6833 tggtgtgccgcacagccacacgaagccatatgtgcgctccaagggaaggaagttcgagaa 6892
Query: 610 ggctcgtggcaggaggaacagccgtggattcaaggt 645
||| ||||||||||||||||||||||||||||||||
Sbjct: 6893 ggcccgtggcaggaggaacagccgtggattcaaggt 6928
Score = 220 bits (111), Expect = 1e-054
Identities = 168/187 (89%)
Strand = Plus / Plus
Query: 306 aggagaagaacattgctgtcattgttggcacagtcacagatgacaaaaggatccaggagg 365
||||||| ||||||||||| |||||||| |||||||| |||||||| |||||||| |||
Sbjct: 5588 aggagaacaacattgctgtgattgttggtacagtcactgatgacaagaggatccaagaga 5647
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
|||| ||||||||||||||||||||||||||||||||| || ||||| ||||||||||
Sbjct: 5648 ttccgaaaatgaaggttactgccctgaggttcacggagacggctagggcaaggattgtca 5707
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
||||||| |||||||||||||| || |||||||||||||| |||||||| ||||| ||||
Sbjct: 5708 atgctggcggcgagtgcctcaccttcgaccagcttgctctccgtgctccgcttggggaga 5767
Query: 486 acacggt 492
|||||||
Sbjct: 5768 acacggt 5774
Score = 117 bits (59), Expect = 1e-023
Identities = 83/91 (91%)
Strand = Plus / Plus
Query: 88 gggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaagtc 147
||||||||||||||| ||||| |||||||| |||||||| |||||||| ||||| | |||
Sbjct: 4843 gggtatcgacctcgttgccggcgggaggaacaagaagacgaagcgcaccgcgccgaggtc 4902
Query: 148 tgacgatgtctacctcaagctcctcgtcaag 178
||||||||||||||||||||||||||||||
Sbjct: 4903 ggacgatgtctacctcaagctcctcgtcaag 4933
Score = 87.7 bits (44), Expect = 1e-014
Identities = 110/132 (83%)
Strand = Plus / Plus
Query: 177 agctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaaga 236
|||| ||||||||| |||| ||||| |||||||| || ||||| || || || |||||||
Sbjct: 5327 agctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaaga 5386
Query: 237 ggcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtcaagttta 296
|||| |||||||| || |||||||| || || ||||| |||||||||| | |||||| |
Sbjct: 5387 ggctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttca 5446
Query: 297 tggaaggaaagg 308
||||||| ||||
Sbjct: 5447 tggaaggcaagg 5458
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 668 gtgttgccatcagcatagtgcaaccgttgtgtttgatcagtcgacagtaattagtaatca 727
||||||| ||| |||| |||| |||||| ||||||| || |||||||||||||||| |||
Sbjct: 6951 gtgttgcgatcggcattgtgcgaccgttctgtttgagcaatcgacagtaattagtagtca 7010
Query: 728 ct 729
||
Sbjct: 7011 ct 7012
>ref|NT_107216.1| Oryza sativa (japonica cultivar-group)
Length = 2910826
Score = 246 bits (124), Expect = 2e-062
Identities = 148/156 (94%)
Strand = Plus / Plus
Query: 490 ggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcc 549
||||||||||||||| |||||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 2262387 ggtcctcttgaggggtcccaagaatgcccgtgaggccgtcaggcactttggtaaggctcc 2262446
Query: 550 tggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaa 609
||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 2262447 tggtgtgccgcacagccacacgaagccatatgtgcgctccaagggaaggaagttcgagaa 2262506
Query: 610 ggctcgtggcaggaggaacagccgtggattcaaggt 645
||| ||||||||||||||||||||||||||||||||
Sbjct: 2262507 ggcccgtggcaggaggaacagccgtggattcaaggt 2262542
Score = 220 bits (111), Expect = 1e-054
Identities = 168/187 (89%)
Strand = Plus / Plus
Query: 306 aggagaagaacattgctgtcattgttggcacagtcacagatgacaaaaggatccaggagg 365
||||||| ||||||||||| |||||||| |||||||| |||||||| |||||||| |||
Sbjct: 2261202 aggagaacaacattgctgtgattgttggtacagtcactgatgacaagaggatccaagaga 2261261
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
|||| ||||||||||||||||||||||||||||||||| || ||||| ||||||||||
Sbjct: 2261262 ttccgaaaatgaaggttactgccctgaggttcacggagacggctagggcaaggattgtca 2261321
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
||||||| |||||||||||||| || |||||||||||||| |||||||| ||||| ||||
Sbjct: 2261322 atgctggcggcgagtgcctcaccttcgaccagcttgctctccgtgctccgcttggggaga 2261381
Query: 486 acacggt 492
|||||||
Sbjct: 2261382 acacggt 2261388
Score = 117 bits (59), Expect = 1e-023
Identities = 83/91 (91%)
Strand = Plus / Plus
Query: 88 gggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaagtc 147
||||||||||||||| ||||| |||||||| |||||||| |||||||| ||||| | |||
Sbjct: 2260457 gggtatcgacctcgttgccggcgggaggaacaagaagacgaagcgcaccgcgccgaggtc 2260516
Query: 148 tgacgatgtctacctcaagctcctcgtcaag 178
||||||||||||||||||||||||||||||
Sbjct: 2260517 ggacgatgtctacctcaagctcctcgtcaag 2260547
Score = 87.7 bits (44), Expect = 1e-014
Identities = 110/132 (83%)
Strand = Plus / Plus
Query: 177 agctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaaga 236
|||| ||||||||| |||| ||||| |||||||| || ||||| || || || |||||||
Sbjct: 2260941 agctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaaga 2261000
Query: 237 ggcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtcaagttta 296
|||| |||||||| || |||||||| || || ||||| |||||||||| | |||||| |
Sbjct: 2261001 ggctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttca 2261060
Query: 297 tggaaggaaagg 308
||||||| ||||
Sbjct: 2261061 tggaaggcaagg 2261072
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 668 gtgttgccatcagcatagtgcaaccgttgtgtttgatcagtcgacagtaattagtaatca 727
||||||| ||| |||| |||| |||||| ||||||| || |||||||||||||||| |||
Sbjct: 2262565 gtgttgcgatcggcattgtgcgaccgttctgtttgagcaatcgacagtaattagtagtca 2262624
Query: 728 ct 729
||
Sbjct: 2262625 ct 2262626
>gb|CH401191.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000028 genomic
scaffold, whole genome shotgun sequence
Length = 7678539
Score = 246 bits (124), Expect = 2e-062
Identities = 148/156 (94%)
Strand = Plus / Plus
Query: 490 ggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcc 549
||||||||||||||| |||||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 3182246 ggtcctcttgaggggtcccaagaatgcccgtgaggccgtcaggcactttggtaaggctcc 3182305
Query: 550 tggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaa 609
||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 3182306 tggtgtgccgcacagccacacgaagccatatgtgcgctccaagggaaggaagttcgagaa 3182365
Query: 610 ggctcgtggcaggaggaacagccgtggattcaaggt 645
||| ||||||||||||||||||||||||||||||||
Sbjct: 3182366 ggcccgtggcaggaggaacagccgtggattcaaggt 3182401
Score = 220 bits (111), Expect = 1e-054
Identities = 168/187 (89%)
Strand = Plus / Plus
Query: 306 aggagaagaacattgctgtcattgttggcacagtcacagatgacaaaaggatccaggagg 365
||||||| ||||||||||| |||||||| |||||||| |||||||| |||||||| |||
Sbjct: 3181061 aggagaacaacattgctgtgattgttggtacagtcactgatgacaagaggatccaagaga 3181120
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
|||| ||||||||||||||||||||||||||||||||| || ||||| ||||||||||
Sbjct: 3181121 ttccgaaaatgaaggttactgccctgaggttcacggagacggctagggcaaggattgtca 3181180
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
||||||| |||||||||||||| || |||||||||||||| |||||||| ||||| ||||
Sbjct: 3181181 atgctggcggcgagtgcctcaccttcgaccagcttgctctccgtgctccgcttggggaga 3181240
Query: 486 acacggt 492
|||||||
Sbjct: 3181241 acacggt 3181247
Score = 117 bits (59), Expect = 1e-023
Identities = 83/91 (91%)
Strand = Plus / Plus
Query: 88 gggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaagtc 147
||||||||||||||| ||||| |||||||| |||||||| |||||||| ||||| | |||
Sbjct: 3180316 gggtatcgacctcgttgccggcgggaggaacaagaagacgaagcgcaccgcgccgaggtc 3180375
Query: 148 tgacgatgtctacctcaagctcctcgtcaag 178
||||||||||||||||||||||||||||||
Sbjct: 3180376 ggacgatgtctacctcaagctcctcgtcaag 3180406
Score = 87.7 bits (44), Expect = 1e-014
Identities = 110/132 (83%)
Strand = Plus / Plus
Query: 177 agctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaaga 236
|||| ||||||||| |||| ||||| |||||||| || ||||| || || || |||||||
Sbjct: 3180800 agctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaaga 3180859
Query: 237 ggcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtcaagttta 296
|||| |||||||| || |||||||| || || ||||| |||||||||| | |||||| |
Sbjct: 3180860 ggctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttca 3180919
Query: 297 tggaaggaaagg 308
||||||| ||||
Sbjct: 3180920 tggaaggcaagg 3180931
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 668 gtgttgccatcagcatagtgcaaccgttgtgtttgatcagtcgacagtaattagtaatca 727
||||||| ||| |||| |||| |||||| ||||||| || |||||||||||||||| |||
Sbjct: 3182424 gtgttgcgatcggcattgtgcgaccgttctgtttgagcaatcgacagtaattagtagtca 3182483
Query: 728 ct 729
||
Sbjct: 3182484 ct 3182485
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 246 bits (124), Expect = 2e-062
Identities = 148/156 (94%)
Strand = Plus / Plus
Query: 490 ggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcc 549
||||||||||||||| |||||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 3182246 ggtcctcttgaggggtcccaagaatgcccgtgaggccgtcaggcactttggtaaggctcc 3182305
Query: 550 tggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaa 609
||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 3182306 tggtgtgccgcacagccacacgaagccatatgtgcgctccaagggaaggaagttcgagaa 3182365
Query: 610 ggctcgtggcaggaggaacagccgtggattcaaggt 645
||| ||||||||||||||||||||||||||||||||
Sbjct: 3182366 ggcccgtggcaggaggaacagccgtggattcaaggt 3182401
Score = 220 bits (111), Expect = 1e-054
Identities = 168/187 (89%)
Strand = Plus / Plus
Query: 306 aggagaagaacattgctgtcattgttggcacagtcacagatgacaaaaggatccaggagg 365
||||||| ||||||||||| |||||||| |||||||| |||||||| |||||||| |||
Sbjct: 3181061 aggagaacaacattgctgtgattgttggtacagtcactgatgacaagaggatccaagaga 3181120
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
|||| ||||||||||||||||||||||||||||||||| || ||||| ||||||||||
Sbjct: 3181121 ttccgaaaatgaaggttactgccctgaggttcacggagacggctagggcaaggattgtca 3181180
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
||||||| |||||||||||||| || |||||||||||||| |||||||| ||||| ||||
Sbjct: 3181181 atgctggcggcgagtgcctcaccttcgaccagcttgctctccgtgctccgcttggggaga 3181240
Query: 486 acacggt 492
|||||||
Sbjct: 3181241 acacggt 3181247
Score = 117 bits (59), Expect = 1e-023
Identities = 83/91 (91%)
Strand = Plus / Plus
Query: 88 gggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaagtc 147
||||||||||||||| ||||| |||||||| |||||||| |||||||| ||||| | |||
Sbjct: 3180316 gggtatcgacctcgttgccggcgggaggaacaagaagacgaagcgcaccgcgccgaggtc 3180375
Query: 148 tgacgatgtctacctcaagctcctcgtcaag 178
||||||||||||||||||||||||||||||
Sbjct: 3180376 ggacgatgtctacctcaagctcctcgtcaag 3180406
Score = 87.7 bits (44), Expect = 1e-014
Identities = 110/132 (83%)
Strand = Plus / Plus
Query: 177 agctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaaga 236
|||| ||||||||| |||| ||||| |||||||| || ||||| || || || |||||||
Sbjct: 3180800 agctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaaga 3180859
Query: 237 ggcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtcaagttta 296
|||| |||||||| || |||||||| || || ||||| |||||||||| | |||||| |
Sbjct: 3180860 ggctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttca 3180919
Query: 297 tggaaggaaagg 308
||||||| ||||
Sbjct: 3180920 tggaaggcaagg 3180931
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 668 gtgttgccatcagcatagtgcaaccgttgtgtttgatcagtcgacagtaattagtaatca 727
||||||| ||| |||| |||| |||||| ||||||| || |||||||||||||||| |||
Sbjct: 3182424 gtgttgcgatcggcattgtgcgaccgttctgtttgagcaatcgacagtaattagtagtca 3182483
Query: 728 ct 729
||
Sbjct: 3182484 ct 3182485
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 246 bits (124), Expect = 2e-062
Identities = 148/156 (94%)
Strand = Plus / Plus
Query: 490 ggtcctcttgaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcc 549
||||||||||||||| |||||||||||||||||||| || ||||||||||| ||||||||
Sbjct: 3172000 ggtcctcttgaggggtcccaagaatgcccgtgaggccgtcaggcactttggtaaggctcc 3172059
Query: 550 tggagtgccgcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaa 609
||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 3172060 tggtgtgccgcacagccacacgaagccatatgtgcgctccaagggaaggaagttcgagaa 3172119
Query: 610 ggctcgtggcaggaggaacagccgtggattcaaggt 645
||| ||||||||||||||||||||||||||||||||
Sbjct: 3172120 ggcccgtggcaggaggaacagccgtggattcaaggt 3172155
Score = 220 bits (111), Expect = 1e-054
Identities = 168/187 (89%)
Strand = Plus / Plus
Query: 306 aggagaagaacattgctgtcattgttggcacagtcacagatgacaaaaggatccaggagg 365
||||||| ||||||||||| |||||||| |||||||| |||||||| |||||||| |||
Sbjct: 3170815 aggagaacaacattgctgtgattgttggtacagtcactgatgacaagaggatccaagaga 3170874
Query: 366 ttccagcaatgaaggttactgccctgaggttcacggagacagcaagggccaggattgtca 425
|||| ||||||||||||||||||||||||||||||||| || ||||| ||||||||||
Sbjct: 3170875 ttccgaaaatgaaggttactgccctgaggttcacggagacggctagggcaaggattgtca 3170934
Query: 426 atgctggtggcgagtgcctcacatttgaccagcttgctcttcgtgctccacttggcgaga 485
||||||| |||||||||||||| || |||||||||||||| |||||||| ||||| ||||
Sbjct: 3170935 atgctggcggcgagtgcctcaccttcgaccagcttgctctccgtgctccgcttggggaga 3170994
Query: 486 acacggt 492
|||||||
Sbjct: 3170995 acacggt 3171001
Score = 117 bits (59), Expect = 1e-023
Identities = 83/91 (91%)
Strand = Plus / Plus
Query: 88 gggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaagtc 147
||||||||||||||| ||||| |||||||| |||||||| |||||||| ||||| | |||
Sbjct: 3170070 gggtatcgacctcgttgccggcgggaggaacaagaagacgaagcgcaccgcgccgaggtc 3170129
Query: 148 tgacgatgtctacctcaagctcctcgtcaag 178
||||||||||||||||||||||||||||||
Sbjct: 3170130 ggacgatgtctacctcaagctcctcgtcaag 3170160
Score = 87.7 bits (44), Expect = 1e-014
Identities = 110/132 (83%)
Strand = Plus / Plus
Query: 177 agctctaccgtttcttggtcaggaggaccaagagcaatttcaacgctgtcattctcaaga 236
|||| ||||||||| |||| ||||| |||||||| || ||||| || || || |||||||
Sbjct: 3170554 agctgtaccgtttcctggtgaggagaaccaagagtaacttcaatgccgtgatcctcaaga 3170613
Query: 237 ggcttttcatgagtaaaaccaaccgaccaccaatctccatgcgccgccttgtcaagttta 296
|||| |||||||| || |||||||| || || ||||| |||||||||| | |||||| |
Sbjct: 3170614 ggctcttcatgagcaagaccaaccgcccgccgctctccctgcgccgcctcgccaagttca 3170673
Query: 297 tggaaggaaagg 308
||||||| ||||
Sbjct: 3170674 tggaaggcaagg 3170685
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 668 gtgttgccatcagcatagtgcaaccgttgtgtttgatcagtcgacagtaattagtaatca 727
||||||| ||| |||| |||| |||||| ||||||| || |||||||||||||||| |||
Sbjct: 3172178 gtgttgcgatcggcattgtgcgaccgttctgtttgagcaatcgacagtaattagtagtca 3172237
Query: 728 ct 729
||
Sbjct: 3172238 ct 3172239
>gb|AU160828.1|AU160828 AU160828 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C30632, mRNA sequence
Length = 535
Score = 244 bits (123), Expect = 7e-062
Identities = 417/515 (80%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
||||||||||||||||||||||| || |||| ||||||||||||||||| |||||||||
Sbjct: 17 atgggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcccaag 76
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| ||||||||||||||||||||| |||||||||||||||| ||| |||| ||||||||
Sbjct: 77 tccgacgatgtctacctcaagctcatcgtcaagctctaccgcttcctggtgcggaggacc 136
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||| |||||||| || || || | | |||| |||||||| || |||||||| ||
Sbjct: 137 aagagccccttcaacgccgtgatcctgaggcggctcttcatgagcaagaccaaccgcccg 196
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaaaggagaagaacattgctgtc 325
|| |||| | |||||||| |||| ||| ||||| || |||||||| | || || ||
Sbjct: 197 ccgctctcgctccgccgcctcgtcaggttcatggagggcaaggagaaccagatcgccgtg 256
Query: 326 attgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttact 385
|| || ||||| || || || ||||| ||| || | ||||| || || |||||||| |
Sbjct: 257 atcgtgggcaccgttaccgacgacaagagggtctacgaggtgccggcgatgaaggtggcc 316
Query: 386 gccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgcctc 445
|| || |||||||| ||||| || ||||| | ||||| ||| ||||||| ||||||||
Sbjct: 317 gcgctcaggttcaccgagaccgcgagggctcgcattgtgaatactggtggagagtgcctt 376
Query: 446 acatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggggc 505
|| || || ||||| || || || | ||| || ||| |||||||||| ||| |||||||
Sbjct: 377 accttcgatcagctggcgctccgcgttcctctgggccagaacacggttctcctgaggggt 436
Query: 506 cccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcacagc 565
|| ||||| ||| | || ||||||| ||||||||| |||||||||||||| ||||||
Sbjct: 437 cctaagaacgccagggaagcagtgaagcactttggtcctgctcctggagtgccacacagc 496
Query: 566 cacaccaagccgtatgtgcgctccaagggaaggaa 600
|||||||||| || |||||||| |||||||||||
Sbjct: 497 aacaccaagccttacgtgcgctcaaagggaaggaa 531
>gb|CF277818.1|CF277818 14ETL--03-H24.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--03-H24, mRNA sequence
Length = 510
Score = 238 bits (120), Expect = 4e-060
Identities = 351/428 (82%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
||||||||||||||||||||||| || |||| ||||||||||||||||| ||||||| |
Sbjct: 57 atgggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcccagg 116
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| || |||||||||||||||||| |||||||||||||||| ||| |||| ||||||||
Sbjct: 117 tccgaggatgtctacctcaagctcatcgtcaagctctaccgcttcctggtgcggaggacc 176
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||| | |||||||| || || || ||| || | |||||||| || |||||||| ||
Sbjct: 177 aagagccacttcaacgccgtgatcctgaagcgggtcttcatgagcaagaccaaccgcccg 236
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaaaggagaagaacattgctgtc 325
|| |||| |||||||| || |||| ||| ||||| || || | | | | || || ||
Sbjct: 237 ccgctctcgatgcgccgtctcgtcatgttcatggatgggaatggggaccagatcgccgtg 296
Query: 326 attgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttact 385
|| || ||||| |||||||||||||| | |||| | ||||| || || |||||||| ||
Sbjct: 297 atcgtgggcaccgtcacagatgacaagatgatctatgaggtgccggcgatgaaggtggct 356
Query: 386 gccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgcctc 445
|| || |||||||| ||||| || || || |||| ||||||| |||||||||||||||
Sbjct: 357 gctctcaggttcaccgagaccgcgagagcacggatcatcaatgccggtggcgagtgcctc 416
Query: 446 acatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggggc 505
|| || |||||||| ||||| || || || |||||| |||||||||||||| |||||||
Sbjct: 417 acgttcgaccagctcgctctccgcgccccgcttggccagaacacggtcctcctgaggggt 476
Query: 506 cccaagaa 513
||||||||
Sbjct: 477 cccaagaa 484
>gb|CF336041.1|CF336041 JMT--05-P07.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--05-P07, mRNA sequence
Length = 564
Score = 230 bits (116), Expect = 1e-057
Identities = 414/512 (80%), Gaps = 1/512 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
||||||||||||||||||||||| || |||| ||||||||||||||||| |||||||||
Sbjct: 43 atgggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcccaag 102
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| ||||||||||||||||||||| |||||||||||||||| ||| |||| ||||||||
Sbjct: 103 tccgacgatgtctacctcaagctcatcgtcaagctctaccgcttcctggtgcggaggacc 162
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||| |||||||| || || || | | |||| |||||||| || |||||||| ||
Sbjct: 163 aagagccccttcaacgccgtgatcctgaggcggctcttcatgagcaagaccaaccgcccg 222
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaaaggagaagaacattgctgtc 325
|| |||| | |||||||| |||| ||| ||||| || |||||||| | || || ||
Sbjct: 223 ccgctctcgctccgccgcctcgtcaggttcatggagggcaaggagaaccagatcgccgtg 282
Query: 326 attgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttact 385
|| || ||||| || || || ||||| ||| || | ||||| || || |||||||| |
Sbjct: 283 atcgtgggcaccgttaccgacgacaagagggtctacgaggtgccggcgatgaaggtggcc 342
Query: 386 gccctgaggttcacggagacagcaagggccaggattgtcaatgctggt-ggcgagtgcct 444
|| || |||||||| ||||| || ||||| | ||||| ||| ||||| || ||||||||
Sbjct: 343 gcgctcaggttcaccgagaccgcgagggctcgcattgtgaatactggtgggagagtgcct 402
Query: 445 cacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagggg 504
|| || || ||||| || || || ||||| || ||| |||||||||| ||| |||||||
Sbjct: 403 taccttcgatcagctggcgctccgcgctcctctgggccagaacacggttctcctgagggg 462
Query: 505 ccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcacag 564
|| ||||| ||| | || ||||||| ||||||||| |||||||||||||| |||||
Sbjct: 463 tcctaagaacgccagggaagcagtgaagcactttggtcctgctcctggagtgccacacag 522
Query: 565 ccacaccaagccgtatgtgcgctccaagggaa 596
| |||||||||| || |||||||| |||||||
Sbjct: 523 caacaccaagccttacgtgcgctcaaagggaa 554
>gb|CA998057.1|CA998057 S234X_H08 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 457
Score = 228 bits (115), Expect = 4e-057
Identities = 139/147 (94%)
Strand = Plus / Minus
Query: 499 gaggggccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgcc 558
|||||| |||||||||||||||||||| || ||||||||||| ||||||||||| |||||
Sbjct: 457 gaggggtcccaagaatgcccgtgaggccgtcaggcactttggtaaggctcctggtgtgcc 398
Query: 559 gcacagccacaccaagccgtatgtgcgctccaagggaaggaagttcgagaaggctcgtgg 618
|||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 397 gcacagccacacgaagccatatgtgcgctccaagggaaggaagttcgagaaggcccgtgg 338
Query: 619 caggaggaacagccgtggattcaaggt 645
|||||||||||||||||||||||||||
Sbjct: 337 caggaggaacagccgtggattcaaggt 311
Score = 60.0 bits (30), Expect = 2e-006
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 668 gtgttgccatcagcatagtgcaaccgttgtgtttgatcagtcgacagtaattagtaatca 727
||||||| ||| |||| |||| |||||| ||||||| || |||||||||||||||| |||
Sbjct: 288 gtgttgcgatcggcattgtgcgaccgttctgtttgagcaatcgacagtaattagtagtca 229
Query: 728 ct 729
||
Sbjct: 228 ct 227
>gb|CF332557.1|CF332557 JMT--01-B20.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--01-B20, mRNA sequence
Length = 560
Score = 218 bits (110), Expect = 4e-054
Identities = 411/510 (80%), Gaps = 1/510 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
||||||||||||||||||||||| || |||| ||||||||||||||||| |||||||||
Sbjct: 51 atgggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcccaag 110
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| ||||||||||||||||||||| |||||||||||||||| ||| |||| ||||||||
Sbjct: 111 tccgacgatgtctacctcaagctcatcgtcaagctctaccgcttcctggtgcggaggacc 170
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||| |||||||| || || || | | |||| |||||||| || |||||||| ||
Sbjct: 171 aagagccccttcaacgccgtgatcctgaggcggctcttcatgagcaagaccaaccgcccg 230
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaaaggagaagaacattgctgtc 325
|| |||| | |||||||| |||| ||| ||||| || |||||||| | || || ||
Sbjct: 231 ccgctctcgctccgccgcctcgtcaggttcatggagggcaaggagaaccagatcgccgtg 290
Query: 326 attgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttact 385
|| || ||||| || || || ||||| ||| || | ||||| || || |||||||| |
Sbjct: 291 atcgtgggcaccgttaccgacgacaagagggtctacgaggtgccggcgatgaaggtggcc 350
Query: 386 gccctgaggttcacggagacagcaagggccaggattgtcaatgct-ggtggcgagtgcct 444
|| || ||||||| ||||| || ||||| | ||||| ||| || ||||| ||||||||
Sbjct: 351 gcgctcgggttcaccgagaccgcgagggctcgcattgtgaatactgggtggagagtgcct 410
Query: 445 cacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgagggg 504
|| || || ||||| || || || ||||| || ||| |||||||||| ||| |||||||
Sbjct: 411 taccttcgatcagctggcgctccgcgctcctctgggccagaacacggttctcctgagggg 470
Query: 505 ccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcacag 564
|| ||||| ||| | || ||||||| ||||||||| |||||||||||||| |||||
Sbjct: 471 tcctaagaacgccagggaagcagtgaagcactttggtcctgctcctggagtgccacacag 530
Query: 565 ccacaccaagccgtatgtgcgctccaaggg 594
| |||||||||| || |||||||| |||||
Sbjct: 531 caacaccaagccttacgtgcgctcaaaggg 560
>gb|CF294993.1|CF294993 30DGS--04-L19.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--04-L19, mRNA sequence
Length = 585
Score = 208 bits (105), Expect = 4e-051
Identities = 408/508 (80%), Gaps = 1/508 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
||||||||||||||||||||||| || |||| ||||||||||||||||| |||||||||
Sbjct: 79 atgggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcccaag 138
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| ||||||||||||||||||||| |||||||||||||||| ||| |||| ||||||||
Sbjct: 139 tccgacgatgtctacctcaagctcatcgtcaagctctaccgcttcctggtgcggaggacc 198
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||| |||||||| || || || | | |||| |||||||| || |||||||| ||
Sbjct: 199 aagagccccttcaacgccgtgatcctgaggcggctcttcatgagcaagaccaaccgcccg 258
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaaaggagaagaacattgctgtc 325
|| |||| | |||||||| |||| ||| ||||| || |||||||| | || || ||
Sbjct: 259 ccgctctcgctccgccgcctcgtcaggttcatggagggcaaggagaaccanatcgccgtg 318
Query: 326 attgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttact 385
|| || ||||| || || || ||||| ||| || | ||||| || || |||||||| |
Sbjct: 319 atcgtgggcaccgttaccgacgacaagagggtctacgaggtgccggcgatgaaggtggcc 378
Query: 386 gccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgcctc 445
|| || |||||||| ||||| || ||||| | ||||| ||| ||||||| ||||||||
Sbjct: 379 gcgctcaggttcaccgagaccgcgagggctcgcattgtgaatactggtggagagtgcctt 438
Query: 446 acatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggggc 505
|| || | ||| | || || || ||||| || ||| |||||||||| ||| |||||||
Sbjct: 439 ac-cttcatcaggtggcgctccgcgctcctctgggccagaacacggttctcctgaggggt 497
Query: 506 cccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcacagc 565
|| ||||| ||| | || || |||| ||||||||| |||||||||||||| ||||||
Sbjct: 498 cctaagaacgccagggaagcggtgaagcactttggtcctgctcctggagtgccacacagc 557
Query: 566 cacaccaagccgtatgtgcgctccaagg 593
|||||||||| || |||||||| ||||
Sbjct: 558 aacaccaagccttacgtgcgctcaaagg 585
>gb|CV725647.1|CV725647 14Salt--02-N11.b1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--02-N11, mRNA sequence
Length = 494
Score = 200 bits (101), Expect = 9e-049
Identities = 365/453 (80%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
||||||||||||||||||||||| || |||| ||||||||||||||||| |||||||||
Sbjct: 42 atgggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcccaag 101
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| ||||||||||||||||||||| |||||||||||||||| ||| |||| ||||||||
Sbjct: 102 tccgacgatgtctacctcaagctcatcgtcaagctctaccgcttcctggtgcggaggacc 161
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||| |||||||| || || || | | |||| |||||||| || |||||||| ||
Sbjct: 162 aagagccccttcaacgccgtgatcctgaggcggctcttcatgagcaagaccaaccgcccg 221
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaaaggagaagaacattgctgtc 325
|| |||| | |||||||| |||| ||| ||||| || |||||||| | || || ||
Sbjct: 222 ccgctctcgctccgccgcctcgtcaggttcatggagggcaaggagaaccagatcgccgtg 281
Query: 326 attgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttact 385
|| || ||||| || || || ||||| ||| || | ||||| || || |||||||| |
Sbjct: 282 atcgtgggcaccgttaccgacgacaagagggtctacgaggtgccggcgatgaaggtggcc 341
Query: 386 gccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgcctc 445
|| || |||||||| ||||| || ||||| | ||||| ||| ||||||| ||||||||
Sbjct: 342 gcgctcaggttcaccgagaccgcgagggctcgcattgtgaatactggtggagagtgcctt 401
Query: 446 acatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggggc 505
|| || || ||||| || || || ||||| || ||| |||||||||| ||| |||||||
Sbjct: 402 accttcgatcagctggcgctccgcgctcctctgggccagaacacggttctcctgaggggt 461
Query: 506 cccaagaatgcccgtgaggcagtgaggcacttt 538
|| ||||| ||| | || ||||||| |||||||
Sbjct: 462 cctaagaacgccagggaagcagtgaagcacttt 494
>gb|CV729906.1|CV729906 FLO--03-C24.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--03-C24,
mRNA sequence
Length = 493
Score = 198 bits (100), Expect = 4e-048
Identities = 346/428 (80%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
||||||||||||||||||||||| || |||| ||||||||||||||||| |||||||||
Sbjct: 51 atgggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcccaag 110
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| ||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||
Sbjct: 111 tccgacgatgtctacctcaagctcatcgtcaagctctaccgcttcttggtgcggaggacc 170
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||| |||||||| || || || | | |||| |||||||| || |||||||| ||
Sbjct: 171 aagagccccttcaacgccgtgatcctgaggcggctcttcatgagcaagaccaaccgcccg 230
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaaaggagaagaacattgctgtc 325
|| |||| | |||||||| |||| ||| ||||| || |||||||| | || || ||
Sbjct: 231 ccgctctcgctccgccgcctcgtcaggttcatggagggcaaggagaaccagatcgccgtg 290
Query: 326 attgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttact 385
|| || ||||| || || || ||||| ||| || | ||||| || || |||||||| |
Sbjct: 291 atcgtgggcaccgttaccgacgacaagagggtctacgaggtgccggcgatgaaggtggcc 350
Query: 386 gccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgcctc 445
|| || |||||||| ||||| || ||||| | ||||| ||| ||||||| ||||||||
Sbjct: 351 gcgctcaggttcaccgagaccgcgagggctcgcattgtgaatactggtggagagtgcctt 410
Query: 446 acatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggggc 505
|| || || ||||| || || || ||||| || ||| |||||||||| ||| |||||||
Sbjct: 411 accttcgatcagctggcgctccgcgctcctctgggccagaacacggttctcctgaggggt 470
Query: 506 cccaagaa 513
|| |||||
Sbjct: 471 cctaagaa 478
>gb|AU164919.1|AU164919 AU164919 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61780, mRNA sequence
Length = 241
Score = 196 bits (99), Expect = 1e-047
Identities = 193/225 (85%), Gaps = 3/225 (1%)
Strand = Plus / Plus
Query: 270 tctccatgcgccgccttgtcaagtttatggaaggaaaggagaagaaca---ttgctgtca 326
||||| |||||||||| | |||||| |||||||| |||||| |||||| ||||||| |
Sbjct: 17 tctccctgcgccgcctcgccaagttcatggaaggcaaggaggagaacaatattgctgtga 76
Query: 327 ttgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttactg 386
||||||| |||||||| |||||||| ||| |||| ||| |||| ||||||||||||||
Sbjct: 77 ttgttggtacagtcactgatgacaagaggntccaagagattccgaaaatgaaggttactg 136
Query: 387 ccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgcctca 446
||||||||||||||||||| || |||| ||||||||||||||||| |||||||||||||
Sbjct: 137 ccctgaggttcacggagacggctagggnaaggattgtcaatgctggcggcgagtgcctca 196
Query: 447 catttgaccagcttgctcttcgtgctccacttggcgagaacacgg 491
| || ||||| ||| |||| |||||||| ||| | ||||||||||
Sbjct: 197 ccttcgaccancttnctctccgtgctccgctttgggagaacacgg 241
>gb|CF300905.1|CF300905 7LEAF--05-I22.b1 Rice leaf plasmid cDNA library II (7LEAF) Oryza
sativa (japonica cultivar-group) cDNA clone
7LEAF--05-I22, mRNA sequence
Length = 560
Score = 196 bits (99), Expect = 1e-047
Identities = 409/510 (80%), Gaps = 2/510 (0%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
||||||||||||||||||||||| || |||| ||||||||||||||||| |||||||||
Sbjct: 51 atgggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcccaag 110
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| ||||||||||||||||||||| |||||||||||||||| ||| |||| ||||||||
Sbjct: 111 tccgacgatgtctacctcaagctcatcgtcaagctctaccgcttcctggtgcggaggacc 170
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||| |||||||| || || || | | |||| |||||||| || |||||||| ||
Sbjct: 171 aagagccccttcaacgccgtgatcctgaggcggctcttcatgagcaagaccaaccgcccg 230
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaaaggagaagaacattgctgtc 325
|| |||| | |||||||| |||| ||| ||||| || |||||||| | || || ||
Sbjct: 231 ccgctctcgctccgccgcctcgtcaggttcatggagggcaaggagaaccagatcgccgtg 290
Query: 326 attgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttact 385
|| || ||||| || || || ||||| ||| || | ||||| || || |||||||| |
Sbjct: 291 atcgtgggcaccgttaccgacgacaagagggtctacgaggtgccggcgatgaaggtggcc 350
Query: 386 gccctgaggttcacggagacagcaagggccaggattgtcaatgctggt-ggcgagtgcct 444
|| || |||||||| ||||| || ||||| | ||||| ||| ||||| || ||||||||
Sbjct: 351 gcgctcaggttcaccgagaccgcgagggctcgcattgtgaatactggtnggagagtgcct 410
Query: 445 cacatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcct-cttgaggg 503
|| || ||||| || || || ||||| || ||| |||||||||| || || |||||
Sbjct: 411 taccttcatncagctggcgctccgcgctcctctgggccagaacacggttctcctggaggg 470
Query: 504 gccccaagaatgcccgtgaggcagtgaggcactttggcaaggctcctggagtgccgcaca 563
| || ||||| ||| | || ||||||| ||||||||| |||||||||||||| ||||
Sbjct: 471 gtcctaagaacgccagggaagcagtgaagcactttggtcctgctcctggagtgccacaca 530
Query: 564 gccacaccaagccgtatgtgcgctccaagg 593
|| |||||||||| || |||||||| ||||
Sbjct: 531 gcaacaccaagccttacgtgcgctcaaagg 560
>gb|CV726120.1|CV726120 14Salt--03-J12.g1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--03-J12, mRNA sequence
Length = 497
Score = 196 bits (99), Expect = 1e-047
Identities = 366/455 (80%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
||||||||||||||||||||||| || |||| |||| |||||||||||| |||||||||
Sbjct: 43 atgggtatcgacctcgtcgccggcggccggaacaagacgaccaagcgcacggcgcccaag 102
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| ||||||||||||||||||||| |||||||||||||||| ||| |||| ||||||||
Sbjct: 103 tccgacgatgtctacctcaagctcatcgtcaagctctaccgcttcctggtgcggaggacc 162
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||| |||||||| || || || | | |||| |||||||| || |||||||| ||
Sbjct: 163 aagagccccttcaacgccgtgatcctgaggcggctcttcatgagcaagaccaaccgcccg 222
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaaaggagaagaacattgctgtc 325
|| |||| | |||||||| |||| ||| ||||| || |||||||| | || || ||
Sbjct: 223 ccgctctcgctccgccgcctcgtcaggttcatggagggcaaggagaaccagatcgccgtg 282
Query: 326 attgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttact 385
|| || ||||| || || || ||||| ||| || | ||||| || || |||||||| |
Sbjct: 283 atcgtgggcaccgttaccgacgacaagagggtctacgaggtgccggcgatgaaggtggcc 342
Query: 386 gccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgcctc 445
|| || |||||||| ||||| || ||||| | ||||| ||| ||||||| ||||||||
Sbjct: 343 gcgctcaggttcaccgagaccgcgagggctcgcattgtgaatactggtggagagtgcctt 402
Query: 446 acatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggggc 505
|| || || ||||| || || || ||||| || ||| |||||||||| ||| |||||||
Sbjct: 403 accttcgatcagctggcgctccgcgctcctctgggccagaacacggttctcctgaggggt 462
Query: 506 cccaagaatgcccgtgaggcagtgaggcactttgg 540
|| ||||| ||| | || ||||||| |||||||||
Sbjct: 463 cctaagaacgccagggaagcagtgaagcactttgg 497
>gb|CV729581.1|CV729581 FLO--02-J17.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--02-J17,
mRNA sequence
Length = 506
Score = 196 bits (99), Expect = 1e-047
Identities = 363/451 (80%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
||||||||||||||||||||||| || |||| ||||||||||||||||| |||||||||
Sbjct: 56 atgggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcccaag 115
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| ||||||||||||||||||||| |||||||||||||||| ||| |||| ||||||||
Sbjct: 116 tccgacgatgtctacctcaagctcatcgtcaagctctaccgcttcctggtgcggaggacc 175
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||| |||||||| || || || | | |||| |||||||| || |||||||| ||
Sbjct: 176 aagagccccttcaacgccgtgatcctgaggcggctcttcatgagcaagaccaaccgcccg 235
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaaaggagaagaacattgctgtc 325
|| |||| | |||||||| |||| ||| ||||| || |||||||| | || || ||
Sbjct: 236 ccgctctcgctccgccgcctcgtcaggttcatggagggcaaggagaaccagatcgccgtg 295
Query: 326 attgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttact 385
|| || ||||| || || || ||||| ||| || | ||||| || || |||||||| |
Sbjct: 296 atcgtgggcaccgttaccgacgacaagagggtctacgaggtgccggcgatgaaggtggcc 355
Query: 386 gccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgcctc 445
|| || |||||||| ||||| || ||||| | ||||| ||| ||||||| ||||||||
Sbjct: 356 gcgctcaggttcaccgagaccgcgagggctcgcattgtgaatactggtggagagtgcctt 415
Query: 446 acatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggggc 505
|| || || ||||| || || || ||||| || ||| |||||||||| ||| |||||||
Sbjct: 416 accttcgatcagctggcgctccgcgctcctctgggccagaacacggttctcctgaggggt 475
Query: 506 cccaagaatgcccgtgaggcagtgaggcact 536
|| ||||| ||| | || ||||||| |||||
Sbjct: 476 cctaagaacgccagggaagcagtgaagcact 506
>gb|CV730920.1|CV730920 FLO--04-L09.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--04-L09,
mRNA sequence
Length = 491
Score = 196 bits (99), Expect = 1e-047
Identities = 363/451 (80%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
||||||||||||||||||||||| || |||| ||||||||||||||||| |||||||||
Sbjct: 41 atgggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcccaag 100
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| ||||||||||||||||||||| |||||||||||||||| ||| |||| ||||||||
Sbjct: 101 tccgacgatgtctacctcaagctcatcgtcaagctctaccgcttcctggtgcggaggacc 160
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||| |||||||| || || || | | |||| |||||||| || |||||||| ||
Sbjct: 161 aagagccccttcaacgccgtgatcctgaggcggctcttcatgagcaagaccaaccgcccg 220
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaaaggagaagaacattgctgtc 325
|| |||| | |||||||| |||| ||| ||||| || |||||||| | || || ||
Sbjct: 221 ccgctctcgctccgccgcctcgtcaggttcatggagggcaaggagaaccagatcgccgtg 280
Query: 326 attgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttact 385
|| || ||||| || || || ||||| ||| || | ||||| || || |||||||| |
Sbjct: 281 atcgtgggcaccgttaccgacgacaagagggtctacgaggtgccggcgatgaaggtggcc 340
Query: 386 gccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgcctc 445
|| || |||||||| ||||| || ||||| | ||||| ||| ||||||| ||||||||
Sbjct: 341 gcgctcaggttcaccgagaccgcgagggctcgcattgtgaatactggtggagagtgcctt 400
Query: 446 acatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggggc 505
|| || || ||||| || || || ||||| || ||| |||||||||| ||| |||||||
Sbjct: 401 accttcgatcagctggcgctccgcgctcctctgggccagaacacggttctcctgaggggt 460
Query: 506 cccaagaatgcccgtgaggcagtgaggcact 536
|| ||||| ||| | || ||||||| |||||
Sbjct: 461 cctaagaacgccagggaagcagtgaagcact 491
>gb|CV728080.1|CV728080 14Salt--06-J11.b1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--06-J11, mRNA sequence
Length = 541
Score = 194 bits (98), Expect = 6e-047
Identities = 362/450 (80%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
||||||||||||||||||||||| || |||| ||||||||||||||||| |||||||||
Sbjct: 92 atgggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcccaag 151
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| ||||||||||||||||||||| |||||||||||||||| ||| |||| ||||||||
Sbjct: 152 tccgacgatgtctacctcaagctcatcgtcaagctctaccgcttcctggtgcggaggacc 211
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||| |||||||| || || || | | |||| |||||||| || |||||||| ||
Sbjct: 212 aagagccccttcaacgccgtgatcctgaggcggctcttcatgagcaagaccaaccgcccg 271
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaaaggagaagaacattgctgtc 325
|| |||| | |||||||| |||| ||| ||||| || |||||||| | || || ||
Sbjct: 272 ccgctctcgctccgccgcctcgtcaggttcatggagggcaaggagaaccagatcgccgtg 331
Query: 326 attgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttact 385
|| || ||||| || || || ||||| ||| || | ||||| || || |||||||| |
Sbjct: 332 atcgtgggcaccgttaccgacgacaagagggtctacgaggtgccggcgatgaaggtggcc 391
Query: 386 gccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgcctc 445
|| || |||||||| ||||| || ||||| | ||||| ||| ||||||| ||||||||
Sbjct: 392 gcgctcaggttcaccgagaccgcgagggctcgcattgtgaatactggtggagagtgcctt 451
Query: 446 acatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggggc 505
|| || || ||||| || || || ||||| || ||| |||||||||| ||| |||||||
Sbjct: 452 accttcgatcagctggcgctccgcgctcctctgggccagaacacggttctcctgaggggt 511
Query: 506 cccaagaatgcccgtgaggcagtgaggcac 535
|| ||||| ||| | || ||||||| ||||
Sbjct: 512 cctaagaacgccagggaagcagtgaagcac 541
>gb|CV726495.1|CV726495 14Salt--04-C20.b1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--04-C20, mRNA sequence
Length = 491
Score = 192 bits (97), Expect = 2e-046
Identities = 358/445 (80%)
Strand = Plus / Plus
Query: 86 atgggtatcgacctcgtcgccggtgggaggaataagaagaccaagcgcactgcgcccaag 145
||||||||||||||||||||||| || |||| ||||||||||||||||| |||||||||
Sbjct: 45 atgggtatcgacctcgtcgccggcggccggaacaagaagaccaagcgcacggcgcccaag 104
Query: 146 tctgacgatgtctacctcaagctcctcgtcaagctctaccgtttcttggtcaggaggacc 205
|| ||||||||||||||||||||| |||||||||||||||| ||| |||| ||||||||
Sbjct: 105 tccgacgatgtctacctcaagctcatcgtcaagctctaccgcttcctggtgcggaggacc 164
Query: 206 aagagcaatttcaacgctgtcattctcaagaggcttttcatgagtaaaaccaaccgacca 265
|||||| |||||||| || || || | | |||| |||||||| || |||||||| ||
Sbjct: 165 aagagccccttcaacgccgtgatcctgaggcggctcttcatgagcaagaccaaccgcccg 224
Query: 266 ccaatctccatgcgccgccttgtcaagtttatggaaggaaaggagaagaacattgctgtc 325
|| |||| | |||||||| |||| ||| ||||| || |||||||| | || || ||
Sbjct: 225 ccgctctcgctccgccgcctcgtcaggttcatggagggcaaggagaactagatcgccgtg 284
Query: 326 attgttggcacagtcacagatgacaaaaggatccaggaggttccagcaatgaaggttact 385
|| || ||||| || || || ||||| ||| || | ||||| || || |||||||| |
Sbjct: 285 atcgtgggcaccgttaccgacgacaagagggtctacgaggtgccggcgatgaaggtggcc 344
Query: 386 gccctgaggttcacggagacagcaagggccaggattgtcaatgctggtggcgagtgcctc 445
|| || |||||||| ||||| || ||||| | ||||| ||| ||||||| ||||||||
Sbjct: 345 gcgctcaggttcaccgagaccgcgagggctcgcattgtgaatactggtggagagtgcctt 404
Query: 446 acatttgaccagcttgctcttcgtgctccacttggcgagaacacggtcctcttgaggggc 505
|| || || ||||| || || || ||||| || ||| |||||||||| ||| |||||||
Sbjct: 405 accttcgatcagctggcgctccgcgctcctctgggccagaacacggttctcctgaggggt 464
Query: 506 cccaagaatgcccgtgaggcagtga 530
|| ||||| ||| | || |||||||
Sbjct: 465 cctaagaacgccagggaagcagtga 489
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,343,022
Number of Sequences: 438736
Number of extensions: 1343022
Number of successful extensions: 16885
Number of sequences better than 0.5: 146
Number of HSP's better than 0.5 without gapping: 145
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 16050
Number of HSP's gapped (non-prelim): 781
length of query: 905
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 884
effective length of database: 2,791,206,460
effective search space: 2467426510640
effective search space used: 2467426510640
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)