BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440568.2.1
(1135 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK104870.1| Oryza sativa (japonica cultivar-group) cDNA... 922 0.0
dbj|AK066258.1| Oryza sativa (japonica cultivar-group) cDNA... 914 0.0
gb|AY224476.1| Oryza sativa (japonica cultivar-group) isola... 745 0.0
gb|CB641455.1|CB641455 OSJNEb01B19.f OSJNEb Oryza sativa (j... 605 e-170
gb|CB649043.1|CB649043 OSJNEb12M03.f OSJNEb Oryza sativa (j... 603 e-170
gb|CB641896.1|CB641896 OSJNEb01M15.r OSJNEb Oryza sativa (j... 555 e-155
gb|CB658155.1|CB658155 OSJNEc13P16.f OSJNEc Oryza sativa (j... 553 e-155
gb|CB670761.1|CB670761 OSJNEe04A04.f OSJNEe Oryza sativa (j... 545 e-152
gb|CB670762.1|CB670762 OSJNEe04A04.r OSJNEe Oryza sativa (j... 527 e-147
gb|CB669235.1|CB669235 OSJNEe01J08.r OSJNEe Oryza sativa (j... 496 e-137
gb|AU032199.1|AU032199 AU032199 Rice root Oryza sativa (jap... 480 e-133
gb|AU032047.1|AU032047 AU032047 Rice root Oryza sativa (jap... 472 e-130
gb|AU162513.1|AU162513 AU162513 Rice root Oryza sativa (jap... 446 e-122
gb|D25141.1|D25141 RICR3332A Rice root Oryza sativa (japoni... 418 e-114
gb|AC087552.3| Oryza sativa (japonica cultivar-group) chrom... 317 7e-084
gb|AACV01010836.1| Oryza sativa (japonica cultivar-group) c... 317 7e-084
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 317 7e-084
gb|AC093490.2| Oryza sativa (japonica cultivar-group) chrom... 317 7e-084
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 317 7e-084
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 317 7e-084
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 317 7e-084
gb|CV724064.1|CV724064 root--05-L04.g1 Rice root lambda pha... 309 2e-081
gb|CF316206.1|CF316206 HD--05-G14.b1 OsHDAC1-overexpressing... 260 1e-066
gb|CA755064.1|CA755064 BR030012000_PLATE_C01_3_002.ab1 OA O... 206 2e-050
gb|CB641895.1|CB641895 OSJNEb01M15.f OSJNEb Oryza sativa (j... 196 2e-047
gb|CF569138.1|CF569138 EST00B09 Subtracted cDNA library of ... 172 3e-040
dbj|AG206448.1| Oryza sativa (japonica cultivar-group) DNA,... 157 2e-035
dbj|AK065231.1| Oryza sativa (japonica cultivar-group) cDNA... 103 2e-019
ref|NM_183791.1| Oryza sativa (japonica cultivar-group), p... 103 2e-019
gb|AU166986.1|AU166986 AU166986 Rice panicle at flowering s... 84 2e-013
gb|D15682.1|D15682 RICC1083A Rice callus Oryza sativa (japo... 82 8e-013
gb|AU065436.1|AU065436 AU065436 Rice root Oryza sativa (jap... 76 5e-011
gb|AU108280.1|AU108280 AU108280 Rice panicle at flowering s... 76 5e-011
gb|AU162536.1|AU162536 AU162536 Rice root Oryza sativa (jap... 76 5e-011
gb|CV723320.1|CV723320 root--03-D11.g1 Rice root lambda pha... 76 5e-011
dbj|AK067164.1| Oryza sativa (japonica cultivar-group) cDNA... 76 5e-011
ref|XM_470385.1| Oryza sativa (japonica cultivar-group), mRNA 76 5e-011
gb|C22473.1|C22473 C22473 Rice callus cDNA Oryza sativa (ja... 72 7e-010
gb|AU108281.1|AU108281 AU108281 Rice panicle at flowering s... 72 7e-010
gb|AU108282.1|AU108282 AU108282 Rice panicle at flowering s... 72 7e-010
gb|CF309692.1|CF309692 ABF--03-P14.g1 ABF3-overexpressing t... 72 7e-010
gb|CF334306.1|CF334306 JMT--03-I20.g1 AtJMT-overexpressing ... 72 7e-010
gb|AC108760.1| Oryza sativa (japonica cultivar-group) chrom... 72 7e-010
dbj|AP004138.1| Oryza sativa (japonica cultivar-group) chro... 72 7e-010
gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 ... 72 7e-010
gb|AC108755.2| Oryza sativa (japonica cultivar-group) chrom... 72 7e-010
dbj|AP006756.2| Oryza sativa (japonica cultivar-group) geno... 72 7e-010
ref|NT_107075.1| Oryza sativa (japonica cultivar-group) 72 7e-010
gb|AACV01001874.1| Oryza sativa (japonica cultivar-group) c... 72 7e-010
gb|AACV01008246.1| Oryza sativa (japonica cultivar-group) c... 72 7e-010
ref|NT_079914.2| Oryza sativa (japonica cultivar-group) 72 7e-010
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 72 7e-010
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 72 7e-010
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 72 7e-010
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 72 7e-010
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 72 7e-010
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 72 7e-010
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 72 7e-010
gb|CF309691.1|CF309691 ABF--03-P14.b1 ABF3-overexpressing t... 70 3e-009
gb|CF316207.1|CF316207 HD--05-G14.g1 OsHDAC1-overexpressing... 70 3e-009
dbj|AK111731.1| Oryza sativa (japonica cultivar-group) cDNA... 70 3e-009
ref|NM_187612.1| Oryza sativa (japonica cultivar-group), p... 70 3e-009
gb|C97886.1|C97886 C97886 Rice callus Oryza sativa (japonic... 66 4e-008
gb|AU093886.1|AU093886 AU093886 Rice panicle at flowering s... 64 2e-007
gb|AU108279.1|AU108279 AU108279 Rice panicle at flowering s... 60 3e-006
gb|AQ050707.1|AQ050707 nbxb0004cB11r CUGI Rice BAC Library ... 58 1e-005
gb|AACV01009512.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
ref|XM_472133.1| Oryza sativa (japonica cultivar-group), p... 58 1e-005
ref|NT_079858.2| Oryza sativa (japonica cultivar-group) 58 1e-005
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
emb|AL731587.2|OSJN00230 Oryza sativa genomic DNA, chromoso... 58 1e-005
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
gb|C98900.1|C98900 C98900 Rice panicle at flowering stage O... 56 4e-005
dbj|AK065576.1| Oryza sativa (japonica cultivar-group) cDNA... 56 4e-005
dbj|AK119296.1| Oryza sativa (japonica cultivar-group) cDNA... 56 4e-005
dbj|AP005555.3| Oryza sativa (japonica cultivar-group) geno... 56 4e-005
ref|XM_472984.1| Oryza sativa (japonica cultivar-group), p... 56 4e-005
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 56 4e-005
gb|AQ577460.1|AQ577460 nbxb0091G13f CUGI Rice BAC Library O... 54 2e-004
gb|AU056402.1|AU056402 AU056402 Oryza sativa mature leaf Ni... 54 2e-004
dbj|AK060211.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
dbj|AK111508.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
dbj|AK111662.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
gb|AACV01010425.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01020212.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
ref|XM_450977.1| Oryza sativa (japonica cultivar-group), mRNA 54 2e-004
ref|XM_462692.1| Oryza sativa (japonica cultivar-group), p... 54 2e-004
ref|XM_473747.1| Oryza sativa (japonica cultivar-group), p... 54 2e-004
ref|NT_079866.2| Oryza sativa (japonica cultivar-group) 54 2e-004
ref|NT_107105.1| Oryza sativa genomic DNA, chromosome 4, BA... 54 2e-004
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromoso... 54 2e-004
emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromoso... 54 2e-004
gb|AQ869414.1|AQ869414 nbeb0035C14f CUGI Rice BAC Library (... 52 7e-004
emb|AL513003.1|CNS07EFI Oryza sativa (japonica cultivar-gro... 52 7e-004
emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC O... 52 7e-004
gb|AC138454.2| Oryza sativa (japonica cultivar-group) chrom... 52 7e-004
gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic ... 52 7e-004
ref|NT_107123.1| Oryza sativa (japonica cultivar-group) 52 7e-004
ref|NT_107145.1| Oryza sativa (japonica cultivar-group) 52 7e-004
gb|AACV01007812.1| Oryza sativa (japonica cultivar-group) c... 52 7e-004
gb|AACV01022292.1| Oryza sativa (japonica cultivar-group) c... 52 7e-004
gb|AACV01023908.1| Oryza sativa (japonica cultivar-group) c... 52 7e-004
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 52 7e-004
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 52 7e-004
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 52 7e-004
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 52 7e-004
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 52 7e-004
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 52 7e-004
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 52 7e-004
gb|AF377946.3| Oryza sativa (japonica cultivar-group) chrom... 52 7e-004
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 52 7e-004
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 52 7e-004
gb|AQ796029.1|AQ796029 nbxb0058D04f CUGI Rice BAC Library O... 50 0.003
dbj|AK072522.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.003
gb|AC145127.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|AACV01009495.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
gb|AACV01020663.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
ref|NM_194572.1| Oryza sativa (japonica cultivar-group) put... 50 0.003
ref|NT_080060.1| Oryza sativa (japonica cultivar-group) chr... 50 0.003
ref|XM_466291.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.003
gb|CH401243.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
emb|AL663020.4|OSJN00220 Oryza sativa genomic DNA, chromoso... 50 0.003
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 50 0.003
gb|AC079685.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 50 0.003
gb|AQ954872.1|AQ954872 nbeb0074M15r CUGI Rice BAC Library (... 48 0.011
dbj|AG212786.1| Oryza sativa (japonica cultivar-group) DNA,... 48 0.011
gb|AU065222.1|AU065222 AU065222 Rice cDNA from immature lea... 48 0.011
gb|AU166996.1|AU166996 AU166996 Rice panicle (between 3cm t... 48 0.011
gb|AU166997.1|AU166997 AU166997 Rice panicle (between 3cm t... 48 0.011
gb|AU172610.1|AU172610 AU172610 Rice panicle at flowering s... 48 0.011
gb|AU225928.1|AU225928 AU225928 Oryza sativa Koshihikari pi... 48 0.011
gb|CB647531.1|CB647531 OSJNEb10H24.r OSJNEb Oryza sativa (j... 48 0.011
gb|CB650142.1|CB650142 OSJNEb14G21.r OSJNEb Oryza sativa (j... 48 0.011
gb|CB670159.1|CB670159 OSJNEe03B18.r OSJNEe Oryza sativa (j... 48 0.011
dbj|AP002953.2| Oryza sativa (japonica cultivar-group) geno... 48 0.011
dbj|AP003211.3| Oryza sativa (japonica cultivar-group) geno... 48 0.011
gb|AACV01000908.1| Oryza sativa (japonica cultivar-group) c... 48 0.011
gb|AACV01020215.1| Oryza sativa (japonica cultivar-group) c... 48 0.011
gb|AACV01022291.1| Oryza sativa (japonica cultivar-group) c... 48 0.011
gb|AACV01023907.1| Oryza sativa (japonica cultivar-group) c... 48 0.011
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 48 0.011
ref|NM_183689.1| Oryza sativa (japonica cultivar-group), p... 48 0.011
ref|NT_079961.2| Oryza sativa (japonica cultivar-group) 48 0.011
gb|CH401165.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.011
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 48 0.011
gb|AQ795263.1|AQ795263 nbxb0055B14r CUGI Rice BAC Library O... 46 0.042
gb|CB648217.1|CB648217 OSJNEb11I03.r OSJNEb Oryza sativa (j... 46 0.042
gb|CB672139.1|CB672139 OSJNEe06A10.f OSJNEe Oryza sativa (j... 46 0.042
gb|CB676085.1|CB676085 OSJNEe12C09.r OSJNEe Oryza sativa (j... 46 0.042
dbj|AP005315.1| Oryza sativa (japonica cultivar-group) chro... 46 0.042
dbj|AK067041.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.042
dbj|AK108495.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.042
dbj|AK119448.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.042
emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC O... 46 0.042
gb|AC134931.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.042
dbj|AP004192.3| Oryza sativa (japonica cultivar-group) geno... 46 0.042
dbj|AP006452.3| Oryza sativa (japonica cultivar-group) geno... 46 0.042
ref|NT_107152.1| Oryza sativa (japonica cultivar-group) 46 0.042
gb|AACV01004989.1| Oryza sativa (japonica cultivar-group) c... 46 0.042
gb|AACV01004990.1| Oryza sativa (japonica cultivar-group) c... 46 0.042
gb|AACV01009246.1| Oryza sativa (japonica cultivar-group) c... 46 0.042
gb|AACV01009250.1| Oryza sativa (japonica cultivar-group) c... 46 0.042
gb|AACV01009252.1| Oryza sativa (japonica cultivar-group) c... 46 0.042
gb|AACV01010799.1| Oryza sativa (japonica cultivar-group) c... 46 0.042
gb|AACV01025524.1| Oryza sativa (japonica cultivar-group) c... 46 0.042
ref|XM_466903.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.042
ref|XM_466907.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.042
ref|XM_471738.1| Oryza sativa (japonica cultivar-group), p... 46 0.042
ref|XM_471744.1| Oryza sativa (japonica cultivar-group), p... 46 0.042
ref|XM_471745.1| Oryza sativa (japonica cultivar-group), p... 46 0.042
ref|XM_475551.1| Oryza sativa (japonica cultivar-group), p... 46 0.042
ref|NT_079856.2| Oryza sativa (japonica cultivar-group) 46 0.042
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 46 0.042
gb|CH401282.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.042
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.042
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.042
emb|AL731596.3|OSJN00236 Oryza sativa genomic DNA, chromoso... 46 0.042
emb|AL731597.3|OSJN00237 Oryza sativa genomic DNA, chromoso... 46 0.042
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 46 0.042
gb|AQ862371.1|AQ862371 nbeb0018D06r CUGI Rice BAC Library (... 44 0.16
gb|AQ364955.2|AQ364955 nbxb0062A23f CUGI Rice BAC Library O... 44 0.16
gb|AU166703.1|AU166703 AU166703 Rice callus (2001) Oryza sa... 44 0.16
dbj|AK102670.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.16
gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 ... 44 0.16
dbj|AP003996.3| Oryza sativa (japonica cultivar-group) geno... 44 0.16
dbj|AP004064.3| Oryza sativa (japonica cultivar-group) geno... 44 0.16
dbj|AP004253.3| Oryza sativa (japonica cultivar-group) geno... 44 0.16
dbj|AP003934.4| Oryza sativa (japonica cultivar-group) geno... 44 0.16
gb|AACV01000859.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
gb|AACV01005618.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
gb|AACV01008010.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
gb|AACV01009489.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
ref|NM_194082.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.16
ref|XM_468308.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.16
ref|XM_472118.1| Oryza sativa (japonica cultivar-group), p... 44 0.16
ref|NT_107182.1| Oryza sativa (japonica cultivar-group) 44 0.16
ref|NT_107187.1| Oryza sativa (japonica cultivar-group) 44 0.16
emb|AL662983.3|OSJN00181 Oryza sativa genomic DNA, chromoso... 44 0.16
>dbj|AK104870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-B08, full
insert sequence
Length = 1454
Score = 922 bits (465), Expect = 0.0
Identities = 800/912 (87%), Gaps = 6/912 (0%)
Strand = Plus / Minus
Query: 218 ttatgacccagcatgttctccagggttagtcgcccgcgcatgcgcattcagcaggggttg 277
||||||||| |||| ||||||||||||||| ||||| |||| |||||||||||||
Sbjct: 1229 ttatgacccggcattttctccagggttagttgcccgagcat------tcagcaggggttg 1176
Query: 278 tagcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaa 337
||||| || || |||||||||||||| || || ||||||||||| || ||||| || ||
Sbjct: 1175 cagcgctttcacgacaatgctcatgtttggtcgaaagtccgcttcatactgaacgcataa 1116
Query: 338 ggcggcgacagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttga 397
|| || ||||| |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 1115 cgccgcaacagctgcaaactttgcgacagctttaggaggatagtcccctccaagtcttga 1056
Query: 398 gtcaacacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagact 457
||||||||| || |||||||||||||| ||||| ||||| || ||||| |||||||||||
Sbjct: 1055 gtcaacacattgcctaaccttgtcttcactaagccttggggtggcccaagtcacaagact 996
Query: 458 ctgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaag 517
||||||||||||||| ||||||||||| ||||||||||| || ||||| |||||||||||
Sbjct: 995 ctgctgtccccttggtaatgtatggtcaacaggtttccttccggtcaatagctcaagaag 936
Query: 518 aacaaccccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactc 577
|||||| |||||||| || ||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 935 aacaactccaaaactgtacacatcactcttggagctaagctgtccagtcattgcatactc 876
Query: 578 aggcgcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctgccatgtc 637
||| ||||| ||||| || ||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 875 aggtgcatgatatccaaaggttccaagaaccctagtagagtgaagccgagctgccatgtc 816
Query: 638 aggagcttggttcgacagatcaaagtcagcgatcttagctacatcgtcatcgaaaagaag 697
|||||||||||| |||| |||||||||||| || ||||| ||||| ||||||||||| ||
Sbjct: 815 aggagcttggtttgacaaatcaaagtcagctattttagcaacatcatcatcgaaaaggag 756
Query: 698 gacgttgctagacttgatgtctcggtgtatgatatggggctgcgctttctcatgaagata 757
|| ||||| ||||||||||| | |||||||||||| ||||| |||||||||||||||||
Sbjct: 755 aacattgctggacttgatgtccctgtgtatgatatgaggctgtgctttctcatgaagata 696
Query: 758 ctcgaggcctttcgctgccccaaccgctatcttcacacgttgcgaccacgataagactgg 817
||| |||||||| ||||||||||| ||||||||||||||||| | ||| |||||||||||
Sbjct: 695 ctccaggccttttgctgccccaacagctatcttcacacgttgtgcccatgataagactgg 636
Query: 818 accgggttgagcccctttaacccctttccttccatgaagcatatcatgaagggaacccat 877
||| |||||||| |||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 635 accaggttgagctcctttaacacccttccttccatgaagcatatcatgaagagaacccat 576
Query: 878 tgtagcgaactcataagcaaggacgcggagtgtcccatcagcacagtaaccaagcaactc 937
|| || ||||||||||||||||| ||||| | |||||| |||| |||||||||| |||
Sbjct: 575 agtcgcaaactcataagcaaggacacggagatttccatcaacacaataaccaagcagctc 516
Query: 938 gacaacattttcatgcttcagccttgacaccatagacacctgggccaagaactcttggtc 997
||||||| ||||||||| ||||| ||||||||||| ||||| ||||| || ||||||||
Sbjct: 515 aacaacatgttcatgcttaagcctcgacaccatagatacctgtgccaaaaattcttggtc 456
Query: 998 tggctgcttgttagaatccaactttttgaccgcggcactcctaccatttcttagaacacc 1057
||||||||| |||| || | |||||||||||| ||||| ||||||||||||||||||||
Sbjct: 455 tggctgcttactagagtctagctttttgaccgctgcacttctaccatttcttagaacacc 396
Query: 1058 caagtatactctgccaaaggatccctcaccaatcaaagcttcatcaccaaaacccttggt 1117
|| || |||||||||||||| || ||||||||||||||||||||||||||| ||| ||
Sbjct: 395 aaaatacactctgccaaaggaaccttcaccaatcaaagcttcatcaccaaaattcttagt 336
Query: 1118 cacctccctaat 1129
||| ||||||||
Sbjct: 335 cacttccctaat 324
>dbj|AK066258.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058B22, full
insert sequence
Length = 1494
Score = 914 bits (461), Expect = 0.0
Identities = 799/912 (87%), Gaps = 6/912 (0%)
Strand = Plus / Minus
Query: 218 ttatgacccagcatgttctccagggttagtcgcccgcgcatgcgcattcagcaggggttg 277
||||||||| |||| ||||||||||||||| ||||| |||| |||||||||||||
Sbjct: 1232 ttatgacccggcattttctccagggttagttgcccgagcat------tcagcaggggttg 1179
Query: 278 tagcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaa 337
||||| || || |||||||||||||| || || ||||||||||| || ||||| || ||
Sbjct: 1178 cagcgctttcacgacaatgctcatgtttggtcgaaagtccgcttcatactgaacgcataa 1119
Query: 338 ggcggcgacagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttga 397
|| || ||||| |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 1118 cgccgcaacagctgcaaactttgcgacagctttaggaggatagtcccctccaagtcttga 1059
Query: 398 gtcaacacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagact 457
||||||||| || |||||||||||||| ||||| ||||| || ||||| |||||||||||
Sbjct: 1058 gtcaacacattgcctaaccttgtcttcactaagccttggggtggcccaagtcacaagact 999
Query: 458 ctgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaag 517
||||||||||||||| ||||||||||| ||||||||||| || ||||| |||||||||||
Sbjct: 998 ctgctgtccccttggtaatgtatggtcaacaggtttccttccggtcaatagctcaagaag 939
Query: 518 aacaaccccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactc 577
|||||| |||||||| || ||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 938 aacaactccaaaactgtacacatcactcttggagctaagctgtccagtcattgcatactc 879
Query: 578 aggcgcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctgccatgtc 637
||| ||||| ||||| || ||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 878 aggtgcatgatatccaaaggttccaagaaccctagtagagtgaagccgagctgccatgtc 819
Query: 638 aggagcttggttcgacagatcaaagtcagcgatcttagctacatcgtcatcgaaaagaag 697
|||||||||||| |||| |||||||||||| || ||||| ||||| ||||||||||| ||
Sbjct: 818 aggagcttggtttgacaaatcaaagtcagctattttagcaacatcatcatcgaaaaggag 759
Query: 698 gacgttgctagacttgatgtctcggtgtatgatatggggctgcgctttctcatgaagata 757
|| ||||| ||||||||||| | |||||||||||| ||||| |||||||||||||||||
Sbjct: 758 aacattgctggacttgatgtccctgtgtatgatatgaggctgtgctttctcatgaagata 699
Query: 758 ctcgaggcctttcgctgccccaaccgctatcttcacacgttgcgaccacgataagactgg 817
||| |||||||| ||||||||||| ||||||||||||||||| | ||| |||||||||||
Sbjct: 698 ctccaggccttttgctgccccaacagctatcttcacacgttgtgcccatgataagactgg 639
Query: 818 accgggttgagcccctttaacccctttccttccatgaagcatatcatgaagggaacccat 877
||| |||||||| |||||||| || |||||||||| ||||||||||||||| ||||||||
Sbjct: 638 accaggttgagctcctttaacacccttccttccataaagcatatcatgaagagaacccat 579
Query: 878 tgtagcgaactcataagcaaggacgcggagtgtcccatcagcacagtaaccaagcaactc 937
|| || ||||||||||||||||| ||||| | |||||| |||| |||||||||| |||
Sbjct: 578 agtcgcaaactcataagcaaggacacggagatttccatcaacacaataaccaagcagctc 519
Query: 938 gacaacattttcatgcttcagccttgacaccatagacacctgggccaagaactcttggtc 997
||||||| ||||||||| ||||| ||||||||||| ||||| ||||| || ||||||||
Sbjct: 518 aacaacatgttcatgcttaagcctcgacaccatagatacctgtgccaaaaattcttggtc 459
Query: 998 tggctgcttgttagaatccaactttttgaccgcggcactcctaccatttcttagaacacc 1057
||||||||| |||| || | |||||||||||| ||||| ||||||||||||||||||||
Sbjct: 458 tggctgcttactagagtctagctttttgaccgctgcacttctaccatttcttagaacacc 399
Query: 1058 caagtatactctgccaaaggatccctcaccaatcaaagcttcatcaccaaaacccttggt 1117
|| || |||||||||||||| || ||||||||||||||||||||||||||| ||| ||
Sbjct: 398 aaaatacactctgccaaaggaaccttcaccaatcaaagcttcatcaccaaaattcttagt 339
Query: 1118 cacctccctaat 1129
||| ||||||||
Sbjct: 338 cacttccctaat 327
>gb|AY224476.1| Oryza sativa (japonica cultivar-group) isolate 29082 putative
protein kinase mRNA, partial cds
Length = 729
Score = 745 bits (376), Expect = 0.0
Identities = 645/735 (87%), Gaps = 6/735 (0%)
Strand = Plus / Minus
Query: 218 ttatgacccagcatgttctccagggttagtcgcccgcgcatgcgcattcagcaggggttg 277
||||||||| |||| ||||||||||||||| ||||| |||| |||||||||||||
Sbjct: 729 ttatgacccggcattttctccagggttagttgcccgagcat------tcagcaggggttg 676
Query: 278 tagcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaa 337
||||| || || |||||||||||||| || || ||||||||||| || ||||| || ||
Sbjct: 675 cagcgctttcacgacaatgctcatgtttggtcgaaagtccgcttcatactgaacgcataa 616
Query: 338 ggcggcgacagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttga 397
|| || ||||| |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 615 cgccgcaacagctgcaaactttgcgacagctttaggaggatagtcccctccaagtcttga 556
Query: 398 gtcaacacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagact 457
||||||||| || |||||||||||||| ||||| ||||| || ||||| |||||||||||
Sbjct: 555 gtcaacacattgcctaaccttgtcttcactaagccttggggtggcccaagtcacaagact 496
Query: 458 ctgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaag 517
||||||||||||||| ||||||||||| ||||||||||| || ||||| |||||||||||
Sbjct: 495 ctgctgtccccttggtaatgtatggtcaacaggtttccttccggtcaatagctcaagaag 436
Query: 518 aacaaccccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactc 577
|||||| |||||||| || ||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 435 aacaactccaaaactgtacacatcactcttggagctaagctgtccagtcattgcatactc 376
Query: 578 aggcgcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctgccatgtc 637
||| ||||| ||||| || ||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 375 aggtgcatgatatccaaaggttccaagaaccctagtagagtgaagccgagctgccatgtc 316
Query: 638 aggagcttggttcgacagatcaaagtcagcgatcttagctacatcgtcatcgaaaagaag 697
|||||||||||| |||| |||||||||||| || ||||| ||||| ||||||||||| ||
Sbjct: 315 aggagcttggtttgacaaatcaaagtcagctattttagcaacatcatcatcgaaaaggag 256
Query: 698 gacgttgctagacttgatgtctcggtgtatgatatggggctgcgctttctcatgaagata 757
|| ||||| ||||||||||| | |||||||||||| ||||| |||||||||||||||||
Sbjct: 255 aacattgctggacttgatgtccctgtgtatgatatgaggctgtgctttctcatgaagata 196
Query: 758 ctcgaggcctttcgctgccccaaccgctatcttcacacgttgcgaccacgataagactgg 817
||| |||||||| ||||||||||| ||||||||||||||||| | ||| |||||||||||
Sbjct: 195 ctccaggccttttgctgccccaacagctatcttcacacgttgtgcccatgataagactgg 136
Query: 818 accgggttgagcccctttaacccctttccttccatgaagcatatcatgaagggaacccat 877
||| |||||||| |||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 135 accaggttgagctcctttaacacccttccttccatgaagcatatcatgaagagaacccat 76
Query: 878 tgtagcgaactcataagcaaggacgcggagtgtcccatcagcacagtaaccaagcaactc 937
|| || ||||||||||||||||| ||||| | |||||| |||| |||||||||| |||
Sbjct: 75 agtcgcaaactcataagcaaggacacggagatttccatcaacacaataaccaagcagctc 16
Query: 938 gacaacattttcatg 952
||||||| ||||||
Sbjct: 15 aacaacatgttcatg 1
>gb|CB641455.1|CB641455 OSJNEb01B19.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb01B19 5', mRNA sequence
Length = 834
Score = 605 bits (305), Expect = e-170
Identities = 503/569 (88%)
Strand = Plus / Minus
Query: 561 ccagtcatcgcatactcaggcgcatggtatccgaatgttccgagaaccctagttgagtga 620
|||||||| ||||||||||| ||||| ||||| || ||||| ||||||||||| ||||||
Sbjct: 801 ccagtcattgcatactcaggtgcatgatatccaaaggttccaagaaccctagtagagtga 742
Query: 621 agccgagctgccatgtcaggagcttggttcgacagatcaaagtcagcgatcttagctaca 680
||||||||||||||||||||||||||||| |||| |||||||||||| || ||||| |||
Sbjct: 741 agccgagctgccatgtcaggagcttggtttgacaaatcaaagtcagctattttagcaaca 682
Query: 681 tcgtcatcgaaaagaaggacgttgctagacttgatgtctcggtgtatgatatggggctgc 740
|| ||||||||||| || || ||||| ||||||||||| | |||||||||||| |||||
Sbjct: 681 tcatcatcgaaaaggagaacattgctggacttgatgtccctgtgtatgatatgaggctgt 622
Query: 741 gctttctcatgaagatactcgaggcctttcgctgccccaaccgctatcttcacacgttgc 800
|||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||
Sbjct: 621 gctttctcatgaagatactccaggccttttgctgccccaacagctatcttcacacgttgt 562
Query: 801 gaccacgataagactggaccgggttgagcccctttaacccctttccttccatgaagcata 860
| ||| |||||||||||||| |||||||| |||||||| || ||||||||||||||||||
Sbjct: 561 gcccatgataagactggaccaggttgagctcctttaacacccttccttccatgaagcata 502
Query: 861 tcatgaagggaacccattgtagcgaactcataagcaaggacgcggagtgtcccatcagca 920
|||||||| |||||||| || || ||||||||||||||||| ||||| | |||||| ||
Sbjct: 501 tcatgaagagaacccatagtcgcaaactcataagcaaggacacggagatttccatcaaca 442
Query: 921 cagtaaccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctgg 980
|| |||||||||| ||| ||||||| ||||||||| ||||| ||||||||||| |||||
Sbjct: 441 caataaccaagcagctcaacaacatgttcatgcttaagcctcgacaccatagatacctgt 382
Query: 981 gccaagaactcttggtctggctgcttgttagaatccaactttttgaccgcggcactccta 1040
||||| || ||||||||||||||||| |||| || | |||||||||||| ||||| |||
Sbjct: 381 gccaaaaattcttggtctggctgcttactagagtctagctttttgaccgctgcacttcta 322
Query: 1041 ccatttcttagaacacccaagtatactctgccaaaggatccctcaccaatcaaagcttca 1100
||||||||||||||||| || || |||||||||||||| || ||||||||||||||||||
Sbjct: 321 ccatttcttagaacaccaaaatacactctgccaaaggaaccttcaccaatcaaagcttca 262
Query: 1101 tcaccaaaacccttggtcacctccctaat 1129
||||||||| ||| ||||| ||||||||
Sbjct: 261 tcaccaaaattcttagtcacttccctaat 233
>gb|CB649043.1|CB649043 OSJNEb12M03.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12M03 5', mRNA sequence
Length = 805
Score = 603 bits (304), Expect = e-170
Identities = 502/568 (88%)
Strand = Plus / Minus
Query: 562 cagtcatcgcatactcaggcgcatggtatccgaatgttccgagaaccctagttgagtgaa 621
||||||| ||||||||||| ||||| ||||| || ||||| ||||||||||| |||||||
Sbjct: 805 cagtcattgcatactcaggtgcatgatatccaaaggttccaagaaccctagtagagtgaa 746
Query: 622 gccgagctgccatgtcaggagcttggttcgacagatcaaagtcagcgatcttagctacat 681
|||||||||||||||||||||||||||| |||| |||||||||||| || ||||| ||||
Sbjct: 745 gccgagctgccatgtcaggagcttggtttgacaaatcaaagtcagctattttagcaacat 686
Query: 682 cgtcatcgaaaagaaggacgttgctagacttgatgtctcggtgtatgatatggggctgcg 741
| ||||||||||| || || ||||| ||||||||||| | |||||||||||| ||||| |
Sbjct: 685 catcatcgaaaaggagaacattgctggacttgatgtccctgtgtatgatatgaggctgtg 626
Query: 742 ctttctcatgaagatactcgaggcctttcgctgccccaaccgctatcttcacacgttgcg 801
||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |
Sbjct: 625 ctttctcatgaagatactccaggccttttgctgccccaacagctatcttcacacgttgtg 566
Query: 802 accacgataagactggaccgggttgagcccctttaacccctttccttccatgaagcatat 861
||| |||||||||||||| |||||||| |||||||| || |||||||||||||||||||
Sbjct: 565 cccatgataagactggaccaggttgagctcctttaacacccttccttccatgaagcatat 506
Query: 862 catgaagggaacccattgtagcgaactcataagcaaggacgcggagtgtcccatcagcac 921
||||||| |||||||| || || ||||||||||||||||| ||||| | |||||| |||
Sbjct: 505 catgaagagaacccatagtcgcaaactcataagcaaggacacggagatttccatcaacac 446
Query: 922 agtaaccaagcaactcgacaacattttcatgcttcagccttgacaccatagacacctggg 981
| |||||||||| ||| ||||||| ||||||||| ||||| ||||||||||| ||||| |
Sbjct: 445 aataaccaagcagctcaacaacatgttcatgcttaagcctcgacaccatagatacctgtg 386
Query: 982 ccaagaactcttggtctggctgcttgttagaatccaactttttgaccgcggcactcctac 1041
|||| || ||||||||||||||||| |||| || | |||||||||||| ||||| ||||
Sbjct: 385 ccaaaaattcttggtctggctgcttactagagtctagctttttgaccgctgcacttctac 326
Query: 1042 catttcttagaacacccaagtatactctgccaaaggatccctcaccaatcaaagcttcat 1101
|||||||||||||||| || || |||||||||||||| || |||||||||||||||||||
Sbjct: 325 catttcttagaacaccaaaatacactctgccaaaggaaccttcaccaatcaaagcttcat 266
Query: 1102 caccaaaacccttggtcacctccctaat 1129
|||||||| ||| ||||| ||||||||
Sbjct: 265 caccaaaattcttagtcacttccctaat 238
>gb|CB641896.1|CB641896 OSJNEb01M15.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb01M15 3', mRNA sequence
Length = 762
Score = 555 bits (280), Expect = e-155
Identities = 489/559 (87%), Gaps = 6/559 (1%)
Strand = Plus / Plus
Query: 218 ttatgacccagcatgttctccagggttagtcgcccgcgcatgcgcattcagcaggggttg 277
||||||||| |||| ||||||||||||||| ||||| |||| |||||||||||||
Sbjct: 210 ttatgacccggcattttctccagggttagttgcccgagcat------tcagcaggggttg 263
Query: 278 tagcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaa 337
||||| || || |||||||||||||| || || ||||||||||| || ||||| || ||
Sbjct: 264 cagcgctttcacgacaatgctcatgtttggtcgaaagtccgcttcatactgaacgcataa 323
Query: 338 ggcggcgacagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttga 397
|| || ||||| |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 324 cgccgcaacagctgcaaactttgcgacagctttaggaggatagtcccctccaagtcttga 383
Query: 398 gtcaacacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagact 457
||||||||| || |||||||||||||| ||||| ||||| || ||||| |||||||||||
Sbjct: 384 gtcaacacattgcctaaccttgtcttcactaagccttggggtggcccaagtcacaagact 443
Query: 458 ctgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaag 517
||||||||||||||| ||||||||||| ||||||||||| || ||||| |||||||||||
Sbjct: 444 ctgctgtccccttggtaatgtatggtcaacaggtttccttccggtcaatagctcaagaag 503
Query: 518 aacaaccccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactc 577
|||||| |||||||| || ||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 504 aacaactccaaaactgtacacatcactcttggagctaagctgtccagtcattgcatactc 563
Query: 578 aggcgcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctgccatgtc 637
||| ||||| ||||| || ||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 564 aggggcatgatatccaaaggttccaagaaccctagtaaagtgaagccgagctgccatgtc 623
Query: 638 aggagcttggttcgacagatcaaagtcagcgatcttagctacatcgtcatcgaaaagaag 697
|||||||||||| |||| |||||||||||| || ||||| ||||| ||||||||||| ||
Sbjct: 624 aggagcttggtttgacaaatcaaagtcagctattttagcaacatcatcatcgaaaaggag 683
Query: 698 gacgttgctagacttgatgtctcggtgtatgatatggggctgcgctttctcatgaagata 757
|| ||||| ||||||||||| | |||||||||||| ||||| |||||||||||||||||
Sbjct: 684 aacattgctggacttgatgtccctgtgtatgatatgaggctgtgctttctcatgaagata 743
Query: 758 ctcgaggcctttcgctgcc 776
||| |||||||| ||||||
Sbjct: 744 ctccaggccttttgctgcc 762
>gb|CB658155.1|CB658155 OSJNEc13P16.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc13P16 5', mRNA sequence
Length = 818
Score = 553 bits (279), Expect = e-155
Identities = 456/515 (88%)
Strand = Plus / Minus
Query: 615 gagtgaagccgagctgccatgtcaggagcttggttcgacagatcaaagtcagcgatctta 674
||||||||||||||||||||||||||||||||||| |||| |||||||||||| || |||
Sbjct: 815 gagtgaagccgagctgccatgtcaggagcttggtttgacaaatcaaagtcagctatttta 756
Query: 675 gctacatcgtcatcgaaaagaaggacgttgctagacttgatgtctcggtgtatgatatgg 734
|| ||||| ||||||||||| || || ||||| ||||||||||| | ||||||||||||
Sbjct: 755 gcaacatcatcatcgaaaaggagaacattgctggacttgatgtccctgtgtatgatatga 696
Query: 735 ggctgcgctttctcatgaagatactcgaggcctttcgctgccccaaccgctatcttcaca 794
||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 695 ggctgtgctttctcatgaagatactccaggccttttgctgccccaacagctatcttcaca 636
Query: 795 cgttgcgaccacgataagactggaccgggttgagcccctttaacccctttccttccatga 854
||||| | ||| |||||||||||||| |||||||| |||||||| || ||||||||||||
Sbjct: 635 cgttgtgcccatgataagactggaccaggttgagctcctttaacacccttccttccatga 576
Query: 855 agcatatcatgaagggaacccattgtagcgaactcataagcaaggacgcggagtgtccca 914
|||||||||||||| |||||||| || || ||||||||||||||||| ||||| | |||
Sbjct: 575 agcatatcatgaagagaacccatagtcgcaaactcataagcaaggacacggagatttcca 516
Query: 915 tcagcacagtaaccaagcaactcgacaacattttcatgcttcagccttgacaccatagac 974
||| |||| |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||
Sbjct: 515 tcaacacaataaccaagcagctcaacaacatgttcatgcttaagcctcgacaccatagat 456
Query: 975 acctgggccaagaactcttggtctggctgcttgttagaatccaactttttgaccgcggca 1034
||||| ||||| || ||||||||||||||||| |||| || | |||||||||||| |||
Sbjct: 455 acctgtgccaaaaattcttggtctggctgcttactagagtctagctttttgaccgctgca 396
Query: 1035 ctcctaccatttcttagaacacccaagtatactctgccaaaggatccctcaccaatcaaa 1094
|| |||||||||||||||||||| || || |||||||||||||| || ||||||||||||
Sbjct: 395 cttctaccatttcttagaacaccaaaatacactctgccaaaggaaccttcaccaatcaaa 336
Query: 1095 gcttcatcaccaaaacccttggtcacctccctaat 1129
||||||||||||||| ||| ||||| ||||||||
Sbjct: 335 gcttcatcaccaaaattcttagtcacttccctaat 301
>gb|CB670761.1|CB670761 OSJNEe04A04.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04A04 5', mRNA sequence
Length = 753
Score = 545 bits (275), Expect = e-152
Identities = 440/495 (88%)
Strand = Plus / Minus
Query: 615 gagtgaagccgagctgccatgtcaggagcttggttcgacagatcaaagtcagcgatctta 674
||||||||||||||||||||||||||||||||||| |||| |||||||||||| || |||
Sbjct: 751 gagtgaagccgagctgccatgtcaggagcttggtttgacaaatcaaagtcagctatttta 692
Query: 675 gctacatcgtcatcgaaaagaaggacgttgctagacttgatgtctcggtgtatgatatgg 734
|| ||||| ||||||||||| || || ||||| ||||||||||| | ||||||||||||
Sbjct: 691 gcaacatcatcatcgaaaaggagaacattgctggacttgatgtccctgtgtatgatatga 632
Query: 735 ggctgcgctttctcatgaagatactcgaggcctttcgctgccccaaccgctatcttcaca 794
||||| |||||||||||||||||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 631 ggctgtgctttctcatgaagatactccaggccttttgctgccccaacagctatcttcaca 572
Query: 795 cgttgcgaccacgataagactggaccgggttgagcccctttaacccctttccttccatga 854
||||| | ||| |||||||||||||| |||||||| |||||||| || ||||||||||||
Sbjct: 571 cgttgtgcccatgataagactggaccaggttgagctcctttaacacccttccttccatga 512
Query: 855 agcatatcatgaagggaacccattgtagcgaactcataagcaaggacgcggagtgtccca 914
|||||||||||||| |||||||| || || ||||||||||||||||| ||||| | |||
Sbjct: 511 agcatatcatgaagagaacccatagtcgcaaactcataagcaaggacacggagatttcca 452
Query: 915 tcagcacagtaaccaagcaactcgacaacattttcatgcttcagccttgacaccatagac 974
||| |||| |||||||||| ||| ||||||| ||||||||| ||||| |||||||||||
Sbjct: 451 tcaacacaataaccaagcagctcaacaacatgttcatgcttaagcctcgacaccatagat 392
Query: 975 acctgggccaagaactcttggtctggctgcttgttagaatccaactttttgaccgcggca 1034
||||| ||||| || ||||||||||||||||| |||| || | |||||||||||| |||
Sbjct: 391 acctgtgccaaaaattcttggtctggctgcttaatagagtctagctttttgaccgctgca 332
Query: 1035 ctcctaccatttcttagaacacccaagtatactctgccaaaggatccctcaccaatcaaa 1094
|| |||||||||||||||||||| || || |||||||||||||| || ||||||||||||
Sbjct: 331 cttctaccatttcttagaacaccaaaatacactctgccaaaggaaccttcaccaatcaaa 272
Query: 1095 gcttcatcaccaaaa 1109
|||||||||||||||
Sbjct: 271 gcttcatcaccaaaa 257
>gb|CB670762.1|CB670762 OSJNEe04A04.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04A04 3', mRNA sequence
Length = 775
Score = 527 bits (266), Expect = e-147
Identities = 466/533 (87%), Gaps = 6/533 (1%)
Strand = Plus / Plus
Query: 218 ttatgacccagcatgttctccagggttagtcgcccgcgcatgcgcattcagcaggggttg 277
||||||||| |||| ||||||||||||||| ||||| |||| |||||||||||||
Sbjct: 249 ttatgacccggcattttctccagggttagttgcccgagcat------tcagcaggggttg 302
Query: 278 tagcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaa 337
||||| || || |||||||||||||| || || ||||||||||| || ||||| || ||
Sbjct: 303 cagcgctttcacgacaatgctcatgtttggtcgaaagtccgcttcatactgaacgcataa 362
Query: 338 ggcggcgacagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttga 397
|| || ||||| |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 363 cgccgcaacagctgcaaactttgcgacagctttaggaggatagtcccctccaagtcttga 422
Query: 398 gtcaacacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagact 457
||||||||| || |||||||||||||| ||||| ||||| || ||||| |||||||||||
Sbjct: 423 gtcaacacattgcctaaccttgtcttcactaagccttggggtggcccaagtcacaagact 482
Query: 458 ctgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaag 517
||||||||||||||| ||||||||||| ||||||||||| || ||||| |||||||||||
Sbjct: 483 ctgctgtccccttggtaatgtatggtcaacaggtttccttccggtcaatagctcaagaag 542
Query: 518 aacaaccccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactc 577
|||||| |||||||| || ||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 543 aacaactccaaaactgtacacatcactcttggagctaagctgtccagtcattgcatactc 602
Query: 578 aggcgcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctgccatgtc 637
||| ||||| ||||| || ||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 603 aggtgcatgatatccaaaggttccaagaaccctagtagagtgaagccgagctgccatgtc 662
Query: 638 aggagcttggttcgacagatcaaagtcagcgatcttagctacatcgtcatcgaaaagaag 697
|||||||||||| |||| |||||||||||| || ||||| ||||| ||||||||||| ||
Sbjct: 663 aggagcttggtttgacaaatcaaagtcagctattttagcaacatcatcatcgaaaaggag 722
Query: 698 gacgttgctagacttgatgtctcggtgtatgatatggggctgcgctttctcat 750
|| ||||| ||||||||||| | |||||||||||| ||||| ||||||||||
Sbjct: 723 aacattgctggacttgatgtccctgtgtatgatatgaggctgtgctttctcat 775
>gb|CB669235.1|CB669235 OSJNEe01J08.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe01J08 3', mRNA sequence
Length = 792
Score = 496 bits (250), Expect = e-137
Identities = 438/501 (87%), Gaps = 6/501 (1%)
Strand = Plus / Plus
Query: 218 ttatgacccagcatgttctccagggttagtcgcccgcgcatgcgcattcagcaggggttg 277
||||||||| |||| ||||||||||||||| ||||| |||| |||||||||||||
Sbjct: 297 ttatgacccggcattttctccagggttagttgcccgagcat------tcagcaggggttg 350
Query: 278 tagcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaa 337
||||| || || |||||||||||||| || || ||||||||||| || ||||| || ||
Sbjct: 351 cagcgctttcacgacaatgctcatgtttggtcgaaagtccgcttcatactgaacgcataa 410
Query: 338 ggcggcgacagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttga 397
|| || ||||| |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 411 cgccgcaacagctgcaaactttgcgacagctttaggaggatagtcccctccaagtcttga 470
Query: 398 gtcaacacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagact 457
||||||||| || |||||||||||||| ||||| ||||| || ||||| |||||||||||
Sbjct: 471 gtcaacacattgcctaaccttgtcttcactaagccttggggtggcccaagtcacaagact 530
Query: 458 ctgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaag 517
||||||||||||||| ||||||||||| ||||||||||| || ||||| |||||||||||
Sbjct: 531 ctgctgtccccttggtaatgtatggtcaacaggtttccttccggtcaatagctcaagaag 590
Query: 518 aacaaccccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactc 577
|||||| |||||||| || ||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 591 aacaactccaaaactgtacacatcactcttggagctaagctgtccagtcattgcatactc 650
Query: 578 aggcgcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctgccatgtc 637
||| ||||| ||||| || ||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 651 aggtgcatgatatccaaaggttccaagaaccctagtagagtgaagccgagctgccatgtc 710
Query: 638 aggagcttggttcgacagatcaaagtcagcgatcttagctacatcgtcatcgaaaagaag 697
|||||||||||| |||| |||||||||||| || ||||| ||||| ||||||||||| ||
Sbjct: 711 aggagcttggtttgacaaatcaaagtcagctattttagcaacatcatcatcgaaaaggag 770
Query: 698 gacgttgctagacttgatgtc 718
|| ||||| |||||||||||
Sbjct: 771 aacattgctggacttgatgtc 791
>gb|AU032199.1|AU032199 AU032199 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3683_8Z, mRNA sequence
Length = 695
Score = 480 bits (242), Expect = e-133
Identities = 437/501 (87%), Gaps = 7/501 (1%)
Strand = Plus / Minus
Query: 218 ttatgacccagcatgttctccagggttagtcgcccgcgcatgcgcattcagcaggggttg 277
||||||||| |||| ||||||||||||||| ||||| |||| |||||||||||||
Sbjct: 516 ttatgacccggcattttctccagggttagttgcccgagcat------tcagcaggggttg 463
Query: 278 tagcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaa 337
||||| || || |||||||||||||| || || ||||||||||| || ||||| || ||
Sbjct: 462 cagcgctttcacgacaatgctcatgtttggtcgaaagtccgcttcatactgaacgcataa 403
Query: 338 ggcggcgacagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttga 397
|| || ||||| |||||||| || |||| ||||||||||||||||||||||||||||||
Sbjct: 402 cgccgcaacagctgcaaactttgcgacag-tttaggaggatagtcccctccaagtcttga 344
Query: 398 gtcaacacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagact 457
||||||||| || |||||||||||||| ||||| ||||| || ||||| |||||||||||
Sbjct: 343 gtcaacacattgcctaaccttgtcttcactaagccttggggtggcccaagtcacaagact 284
Query: 458 ctgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaag 517
||||||||||||||| ||||||||||| ||||||||||| || ||||| |||||||||||
Sbjct: 283 ctgctgtccccttggtaatgtatggtcaacaggtttccttccggtcaatagctcaagaag 224
Query: 518 aacaaccccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactc 577
|||||| |||||||| || ||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 223 aacaactccaaaactgtacacatcactcttggagctaagctgtccagtcattgcatactc 164
Query: 578 aggcgcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctgccatgtc 637
||| ||||| ||||| || ||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 163 aggtgcatgatatccaaaggttccaagaaccctagtagagtgaagccgagctgccatgtc 104
Query: 638 aggagcttggttcgacagatcaaagtcagcgatcttagctacatcgtcatcgaaaagaag 697
|||||||||||| |||| |||||||||||| || ||||| ||||| ||||||||||| ||
Sbjct: 103 aggagcttggtttgacaaatcaaagtcagctattttagcaacatcatcatcgaaaaggag 44
Query: 698 gacgttgctagacttgatgtc 718
|| ||||| |||||||||||
Sbjct: 43 aacattgctggacttgatgtc 23
>gb|AU032047.1|AU032047 AU032047 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3332_6Z, mRNA sequence
Length = 715
Score = 472 bits (238), Expect = e-130
Identities = 469/544 (86%), Gaps = 9/544 (1%)
Strand = Plus / Minus
Query: 218 ttatgacccagcatgttctccagggttagtcgcccgcgcatgcgcattcagcaggggttg 277
||||||||| |||| ||| ||||||||||| ||||| |||| |||||||||||||
Sbjct: 536 ttatgacccggcattttcnccagggttagttgcccgagcat------tcagcaggggttg 483
Query: 278 tagcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaa 337
||||| || || |||||||||||||| || || ||||||||||| || ||||| || ||
Sbjct: 482 cagcgctttcacgacaatgctcatgtttggtcgaaagtccgcttcatactgaacgcataa 423
Query: 338 ggcggcgacagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttga 397
|| || ||||| |||||||| || |||| ||||||||||||||||||||||||||||||
Sbjct: 422 cgccgcaacagctgcaaactttgcgacag-tttaggaggatagtcccctccaagtcttga 364
Query: 398 gtcaacacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagact 457
||||||||| || |||||||||||||| | ||| ||||| || ||||| |||||||||||
Sbjct: 363 gtcaacacattgcctaaccttgtcttcacnaagccttggggtggcccaagtcacaagact 304
Query: 458 ctgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaag 517
||||||||||||||| ||||||||||| ||||||||||| || ||||| |||||||||||
Sbjct: 303 ctgctgtccccttggtaatgtatggtcaacaggtttccttccggtcaatagctcaagaag 244
Query: 518 aacaaccccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactc 577
|||||| |||||||| || ||||||| ||| ||||| || || |||||||| ||||||||
Sbjct: 243 aacaactccaaaactgtacacatcacncttggagctaagctgtccagtcattgcatactc 184
Query: 578 aggcgcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctgccatgtc 637
||| ||||| |||| || ||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 183 aggtgcatganatccaaaggttccaagaaccctagtagagtgaagccgagctgccatgtc 124
Query: 638 aggagcttggttcgacagatcaaagtcagcgatcttagctacatcgtcatcgaaaagaag 697
|||||||||||| |||| |||||||||||| || ||||| ||||| ||||||||||| ||
Sbjct: 123 aggagcttggtttgacaaatcaaagtcagctattttagcaacatcatcatcgaaaaggag 64
Query: 698 gacgttgctagacttgatgtctcggtgtatgatatggggctgcgctttct-catgaagat 756
|| |||| ||||||||||| | |||||||||||| ||||| |||||| |||||||||
Sbjct: 63 aac-atgctggacttgatgtccctgtgtatgatatgaggctgtgctttcnccatgaagat 5
Query: 757 actc 760
||||
Sbjct: 4 actc 1
>gb|AU162513.1|AU162513 AU162513 Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R3683, mRNA sequence
Length = 450
Score = 446 bits (225), Expect = e-122
Identities = 392/447 (87%), Gaps = 1/447 (0%)
Strand = Plus / Minus
Query: 656 atcaaagtcagcgatcttagctacatcgtcatcgaaaagaaggacgttgctagacttgat 715
|||||||||||| || ||||| ||||| |||||||||||||| || ||||| ||||||||
Sbjct: 446 atcaaagtcagctattttagcaacatcatcatcgaaaagaagaacattgctggacttgat 387
Query: 716 gtctcggtgtatgatatggggctgcgctttctcatgaagatactcgaggcctttcgctgc 775
| | | |||||||||||| | ||| |||||||||||||||||||| |||||||| |||||
Sbjct: 386 gnccctgtgtatgatatgag-ctgtgctttctcatgaagatactccaggccttttgctgc 328
Query: 776 cccaaccgctatcttcacacgttgcgaccacgataagactggaccgggttgagccccttt 835
|||||| ||||||||||||||||| | ||| |||||||||||||| |||||||| |||||
Sbjct: 327 cccaacagctatcttcacacgttgtgcccatgataagactggaccaggttgagctccttt 268
Query: 836 aacccctttccttccatgaagcatatcatgaagggaacccattgtagcgaactcataagc 895
||| || |||||||||||||||||||||||||| |||||||| || || |||||||||||
Sbjct: 267 aacacccttccttccatgaagcatatcatgaagagaacccatagtcgcaaactcataagc 208
Query: 896 aaggacgcggagtgtcccatcagcacagtaaccaagcaactcgacaacattttcatgctt 955
|||||| ||||| | |||||| |||| |||||||||| ||| ||||||| |||||||||
Sbjct: 207 aaggacacggagatttccatcaacacaataaccaagcagctcaacaacatgttcatgctt 148
Query: 956 cagccttgacaccatagacacctgggccaagaactcttggtctggctgcttgttagaatc 1015
||||| ||||||||||| ||||| ||||| || ||||||||||||||||| |||| ||
Sbjct: 147 aagcctcgacaccatagatacctgtgccaaaaattcttggtctggctgcttactagagtc 88
Query: 1016 caactttttgaccgcggcactcctaccatttcttagaacacccaagtatactctgccaaa 1075
| |||||||| ||| ||||| |||||||||||||||||||| || || |||||||||||
Sbjct: 87 tagctttttgancgctgcacttctaccatttcttagaacaccaaaatacactctgccaaa 28
Query: 1076 ggatccctcaccaatcaaagcttcatc 1102
||| || ||||||||||||||||||||
Sbjct: 27 ggaaccttcaccaatcaaagcttcatc 1
>gb|D25141.1|D25141 RICR3332A Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R3332_1A, mRNA sequence
Length = 399
Score = 418 bits (211), Expect = e-114
Identities = 340/383 (88%)
Strand = Plus / Minus
Query: 722 gtgtatgatatggggctgcgctttctcatgaagatactcgaggcctttcgctgccccaac 781
|||||||||||| ||||| |||||||||||||||||||| |||||||| |||||||||||
Sbjct: 394 gtgtatgatatgaggctgtgctttctcatgaagatactccaggccttttgctgccccaac 335
Query: 782 cgctatcttcacacgttgcgaccacgataagactggaccgggttgagcccctttaacccc 841
||||||||||||||||| | ||| |||||||||||||| |||||||| |||||||| ||
Sbjct: 334 agctatcttcacacgttgtgcccatgataagactggaccaggttgagctcctttaacacc 275
Query: 842 tttccttccatgaagcatatcatgaagggaacccattgtagcgaactcataagcaaggac 901
|||||||||||||||||||||||||| |||||||| || || |||||||||||||||||
Sbjct: 274 cttccttccatgaagcatatcatgaagagaacccatagtcgcaaactcataagcaaggac 215
Query: 902 gcggagtgtcccatcagcacagtaaccaagcaactcgacaacattttcatgcttcagcct 961
||||| | |||||| |||| |||||||||| ||| ||||||| ||||||||| |||||
Sbjct: 214 acggagatttccatcaacacaataaccaagcagctcaacaacatgttcatgcttaagcct 155
Query: 962 tgacaccatagacacctgggccaagaactcttggtctggctgcttgttagaatccaactt 1021
||||||||||| ||||| ||||| || ||||||||||||||||| |||| || | |||
Sbjct: 154 cgacaccatagatacctgtgccaaaaattcttggtctggctgcttactagagtctagctt 95
Query: 1022 tttgaccgcggcactcctaccatttcttagaacacccaagtatactctgccaaaggatcc 1081
||||||||| ||||| |||||||||||||||||||| || || |||||||||||||| ||
Sbjct: 94 tttgaccgctgcacttctaccatttcttagaacaccaaaatacactctgccaaaggaacc 35
Query: 1082 ctcaccaatcaaagcttcatcac 1104
||||||||||||||||||||||
Sbjct: 34 ttcaccaatcaaagcttcatcac 12
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07,
complete sequence
Length = 151399
Score = 317 bits (160), Expect = 7e-084
Identities = 250/280 (89%)
Strand = Plus / Minus
Query: 571 catactcaggcgcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctg 630
|||||||||| ||||| ||||| || ||||| ||||||||||| ||||||||||||||||
Sbjct: 131826 catactcaggtgcatgatatccaaaggttccaagaaccctagtagagtgaagccgagctg 131767
Query: 631 ccatgtcaggagcttggttcgacagatcaaagtcagcgatcttagctacatcgtcatcga 690
||||||||||||||||||| |||| |||||||||||| || ||||| ||||| |||||||
Sbjct: 131766 ccatgtcaggagcttggtttgacaaatcaaagtcagctattttagcaacatcatcatcga 131707
Query: 691 aaagaaggacgttgctagacttgatgtctcggtgtatgatatggggctgcgctttctcat 750
|||| || || ||||| ||||||||||| | |||||||||||| ||||| ||||||||||
Sbjct: 131706 aaaggagaacattgctggacttgatgtccctgtgtatgatatgaggctgtgctttctcat 131647
Query: 751 gaagatactcgaggcctttcgctgccccaaccgctatcttcacacgttgcgaccacgata 810
|||||||||| |||||||| ||||||||||| ||||||||||||||||| | ||| ||||
Sbjct: 131646 gaagatactccaggccttttgctgccccaacagctatcttcacacgttgtgcccatgata 131587
Query: 811 agactggaccgggttgagcccctttaacccctttccttcc 850
|||||||||| |||||||| |||||||| || ||||||||
Sbjct: 131586 agactggaccaggttgagctcctttaacacccttccttcc 131547
Score = 157 bits (79), Expect = 2e-035
Identities = 136/155 (87%)
Strand = Plus / Minus
Query: 975 acctgggccaagaactcttggtctggctgcttgttagaatccaactttttgaccgcggca 1034
||||| ||||| || ||||||||||||||||| |||| || | |||||||||||| |||
Sbjct: 131227 acctgtgccaaaaattcttggtctggctgcttactagagtctagctttttgaccgctgca 131168
Query: 1035 ctcctaccatttcttagaacacccaagtatactctgccaaaggatccctcaccaatcaaa 1094
|| |||||||||||||||||||| || || |||||||||||||| || ||||||||||||
Sbjct: 131167 cttctaccatttcttagaacaccaaaatacactctgccaaaggaaccttcaccaatcaaa 131108
Query: 1095 gcttcatcaccaaaacccttggtcacctccctaat 1129
||||||||||||||| ||| ||||| ||||||||
Sbjct: 131107 gcttcatcaccaaaattcttagtcacttccctaat 131073
Score = 155 bits (78), Expect = 6e-035
Identities = 120/134 (89%)
Strand = Plus / Minus
Query: 442 cccaggtcacaagactctgctgtccccttggcaatgtatggtcgacaggtttcctcccag 501
|||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| || |
Sbjct: 132036 cccaagtcacaagactctgctgtccccttggtaatgtatggtcaacaggtttccttccgg 131977
Query: 502 tcaacagctcaagaagaacaaccccaaaactatatacatcactcttagagctgagttgcc 561
|||| ||||||||||||||||| |||||||| || ||||||||||| ||||| || || |
Sbjct: 131976 tcaatagctcaagaagaacaactccaaaactgtacacatcactcttggagctaagctgtc 131917
Query: 562 cagtcatcgcatac 575
||||||| ||||||
Sbjct: 131916 cagtcattgcatac 131903
Score = 133 bits (67), Expect = 2e-028
Identities = 115/131 (87%)
Strand = Plus / Minus
Query: 849 ccatgaagcatatcatgaagggaacccattgtagcgaactcataagcaaggacgcggagt 908
|||||||||||||||||||| |||||||| || || ||||||||||||||||| |||||
Sbjct: 131429 ccatgaagcatatcatgaagagaacccatagtcgcaaactcataagcaaggacacggaga 131370
Query: 909 gtcccatcagcacagtaaccaagcaactcgacaacattttcatgcttcagccttgacacc 968
| |||||| |||| |||||||||| ||| ||||||| ||||||||| ||||| ||||||
Sbjct: 131369 tttccatcaacacaataaccaagcagctcaacaacatgttcatgcttaagcctcgacacc 131310
Query: 969 atagacacctg 979
||||| |||||
Sbjct: 131309 atagatacctg 131299
Score = 115 bits (58), Expect = 5e-023
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 363 acagctttaggaggatagtcccctccaagtcttgagtcaacacactgtctaaccttgtct 422
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 132212 acagctttaggaggatagtcccctccaagtcttgagtcaacacattgcctaaccttgtct 132153
Query: 423 tcgctaagtcttgg 436
|| ||||| |||||
Sbjct: 132152 tcactaagccttgg 132139
Score = 81.8 bits (41), Expect = 8e-013
Identities = 115/140 (82%), Gaps = 6/140 (4%)
Strand = Plus / Minus
Query: 218 ttatgacccagcatgttctccagggttagtcgcccgcgcatgcgcattcagcaggggttg 277
||||||||| |||| ||||||||||||||| ||||| |||| |||||||||||||
Sbjct: 132639 ttatgacccggcattttctccagggttagttgcccgagcat------tcagcaggggttg 132586
Query: 278 tagcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaa 337
||||| || || |||||||||||||| || || ||||||||||| || ||||| || ||
Sbjct: 132585 cagcgctttcacgacaatgctcatgtttggtcgaaagtccgcttcatactgaacgcataa 132526
Query: 338 ggcggcgacagccgcaaact 357
|| || ||||| |||||||
Sbjct: 132525 cgccgcaacagctgcaaact 132506
>gb|AACV01010836.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg010836, whole
genome shotgun sequence
Length = 39187
Score = 317 bits (160), Expect = 7e-084
Identities = 250/280 (89%)
Strand = Plus / Minus
Query: 571 catactcaggcgcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctg 630
|||||||||| ||||| ||||| || ||||| ||||||||||| ||||||||||||||||
Sbjct: 29425 catactcaggtgcatgatatccaaaggttccaagaaccctagtagagtgaagccgagctg 29366
Query: 631 ccatgtcaggagcttggttcgacagatcaaagtcagcgatcttagctacatcgtcatcga 690
||||||||||||||||||| |||| |||||||||||| || ||||| ||||| |||||||
Sbjct: 29365 ccatgtcaggagcttggtttgacaaatcaaagtcagctattttagcaacatcatcatcga 29306
Query: 691 aaagaaggacgttgctagacttgatgtctcggtgtatgatatggggctgcgctttctcat 750
|||| || || ||||| ||||||||||| | |||||||||||| ||||| ||||||||||
Sbjct: 29305 aaaggagaacattgctggacttgatgtccctgtgtatgatatgaggctgtgctttctcat 29246
Query: 751 gaagatactcgaggcctttcgctgccccaaccgctatcttcacacgttgcgaccacgata 810
|||||||||| |||||||| ||||||||||| ||||||||||||||||| | ||| ||||
Sbjct: 29245 gaagatactccaggccttttgctgccccaacagctatcttcacacgttgtgcccatgata 29186
Query: 811 agactggaccgggttgagcccctttaacccctttccttcc 850
|||||||||| |||||||| |||||||| || ||||||||
Sbjct: 29185 agactggaccaggttgagctcctttaacacccttccttcc 29146
Score = 157 bits (79), Expect = 2e-035
Identities = 136/155 (87%)
Strand = Plus / Minus
Query: 975 acctgggccaagaactcttggtctggctgcttgttagaatccaactttttgaccgcggca 1034
||||| ||||| || ||||||||||||||||| |||| || | |||||||||||| |||
Sbjct: 28826 acctgtgccaaaaattcttggtctggctgcttactagagtctagctttttgaccgctgca 28767
Query: 1035 ctcctaccatttcttagaacacccaagtatactctgccaaaggatccctcaccaatcaaa 1094
|| |||||||||||||||||||| || || |||||||||||||| || ||||||||||||
Sbjct: 28766 cttctaccatttcttagaacaccaaaatacactctgccaaaggaaccttcaccaatcaaa 28707
Query: 1095 gcttcatcaccaaaacccttggtcacctccctaat 1129
||||||||||||||| ||| ||||| ||||||||
Sbjct: 28706 gcttcatcaccaaaattcttagtcacttccctaat 28672
Score = 155 bits (78), Expect = 6e-035
Identities = 120/134 (89%)
Strand = Plus / Minus
Query: 442 cccaggtcacaagactctgctgtccccttggcaatgtatggtcgacaggtttcctcccag 501
|||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| || |
Sbjct: 29635 cccaagtcacaagactctgctgtccccttggtaatgtatggtcaacaggtttccttccgg 29576
Query: 502 tcaacagctcaagaagaacaaccccaaaactatatacatcactcttagagctgagttgcc 561
|||| ||||||||||||||||| |||||||| || ||||||||||| ||||| || || |
Sbjct: 29575 tcaatagctcaagaagaacaactccaaaactgtacacatcactcttggagctaagctgtc 29516
Query: 562 cagtcatcgcatac 575
||||||| ||||||
Sbjct: 29515 cagtcattgcatac 29502
Score = 133 bits (67), Expect = 2e-028
Identities = 115/131 (87%)
Strand = Plus / Minus
Query: 849 ccatgaagcatatcatgaagggaacccattgtagcgaactcataagcaaggacgcggagt 908
|||||||||||||||||||| |||||||| || || ||||||||||||||||| |||||
Sbjct: 29028 ccatgaagcatatcatgaagagaacccatagtcgcaaactcataagcaaggacacggaga 28969
Query: 909 gtcccatcagcacagtaaccaagcaactcgacaacattttcatgcttcagccttgacacc 968
| |||||| |||| |||||||||| ||| ||||||| ||||||||| ||||| ||||||
Sbjct: 28968 tttccatcaacacaataaccaagcagctcaacaacatgttcatgcttaagcctcgacacc 28909
Query: 969 atagacacctg 979
||||| |||||
Sbjct: 28908 atagatacctg 28898
Score = 115 bits (58), Expect = 5e-023
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 363 acagctttaggaggatagtcccctccaagtcttgagtcaacacactgtctaaccttgtct 422
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 29811 acagctttaggaggatagtcccctccaagtcttgagtcaacacattgcctaaccttgtct 29752
Query: 423 tcgctaagtcttgg 436
|| ||||| |||||
Sbjct: 29751 tcactaagccttgg 29738
Score = 81.8 bits (41), Expect = 8e-013
Identities = 115/140 (82%), Gaps = 6/140 (4%)
Strand = Plus / Minus
Query: 218 ttatgacccagcatgttctccagggttagtcgcccgcgcatgcgcattcagcaggggttg 277
||||||||| |||| ||||||||||||||| ||||| |||| |||||||||||||
Sbjct: 30238 ttatgacccggcattttctccagggttagttgcccgagcat------tcagcaggggttg 30185
Query: 278 tagcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaa 337
||||| || || |||||||||||||| || || ||||||||||| || ||||| || ||
Sbjct: 30184 cagcgctttcacgacaatgctcatgtttggtcgaaagtccgcttcatactgaacgcataa 30125
Query: 338 ggcggcgacagccgcaaact 357
|| || ||||| |||||||
Sbjct: 30124 cgccgcaacagctgcaaact 30105
>ref|NT_107216.1| Oryza sativa (japonica cultivar-group)
Length = 2910826
Score = 317 bits (160), Expect = 7e-084
Identities = 250/280 (89%)
Strand = Plus / Minus
Query: 571 catactcaggcgcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctg 630
|||||||||| ||||| ||||| || ||||| ||||||||||| ||||||||||||||||
Sbjct: 1129344 catactcaggtgcatgatatccaaaggttccaagaaccctagtagagtgaagccgagctg 1129285
Query: 631 ccatgtcaggagcttggttcgacagatcaaagtcagcgatcttagctacatcgtcatcga 690
||||||||||||||||||| |||| |||||||||||| || ||||| ||||| |||||||
Sbjct: 1129284 ccatgtcaggagcttggtttgacaaatcaaagtcagctattttagcaacatcatcatcga 1129225
Query: 691 aaagaaggacgttgctagacttgatgtctcggtgtatgatatggggctgcgctttctcat 750
|||| || || ||||| ||||||||||| | |||||||||||| ||||| ||||||||||
Sbjct: 1129224 aaaggagaacattgctggacttgatgtccctgtgtatgatatgaggctgtgctttctcat 1129165
Query: 751 gaagatactcgaggcctttcgctgccccaaccgctatcttcacacgttgcgaccacgata 810
|||||||||| |||||||| ||||||||||| ||||||||||||||||| | ||| ||||
Sbjct: 1129164 gaagatactccaggccttttgctgccccaacagctatcttcacacgttgtgcccatgata 1129105
Query: 811 agactggaccgggttgagcccctttaacccctttccttcc 850
|||||||||| |||||||| |||||||| || ||||||||
Sbjct: 1129104 agactggaccaggttgagctcctttaacacccttccttcc 1129065
Score = 157 bits (79), Expect = 2e-035
Identities = 136/155 (87%)
Strand = Plus / Minus
Query: 975 acctgggccaagaactcttggtctggctgcttgttagaatccaactttttgaccgcggca 1034
||||| ||||| || ||||||||||||||||| |||| || | |||||||||||| |||
Sbjct: 1128745 acctgtgccaaaaattcttggtctggctgcttactagagtctagctttttgaccgctgca 1128686
Query: 1035 ctcctaccatttcttagaacacccaagtatactctgccaaaggatccctcaccaatcaaa 1094
|| |||||||||||||||||||| || || |||||||||||||| || ||||||||||||
Sbjct: 1128685 cttctaccatttcttagaacaccaaaatacactctgccaaaggaaccttcaccaatcaaa 1128626
Query: 1095 gcttcatcaccaaaacccttggtcacctccctaat 1129
||||||||||||||| ||| ||||| ||||||||
Sbjct: 1128625 gcttcatcaccaaaattcttagtcacttccctaat 1128591
Score = 155 bits (78), Expect = 6e-035
Identities = 120/134 (89%)
Strand = Plus / Minus
Query: 442 cccaggtcacaagactctgctgtccccttggcaatgtatggtcgacaggtttcctcccag 501
|||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| || |
Sbjct: 1129554 cccaagtcacaagactctgctgtccccttggtaatgtatggtcaacaggtttccttccgg 1129495
Query: 502 tcaacagctcaagaagaacaaccccaaaactatatacatcactcttagagctgagttgcc 561
|||| ||||||||||||||||| |||||||| || ||||||||||| ||||| || || |
Sbjct: 1129494 tcaatagctcaagaagaacaactccaaaactgtacacatcactcttggagctaagctgtc 1129435
Query: 562 cagtcatcgcatac 575
||||||| ||||||
Sbjct: 1129434 cagtcattgcatac 1129421
Score = 133 bits (67), Expect = 2e-028
Identities = 115/131 (87%)
Strand = Plus / Minus
Query: 849 ccatgaagcatatcatgaagggaacccattgtagcgaactcataagcaaggacgcggagt 908
|||||||||||||||||||| |||||||| || || ||||||||||||||||| |||||
Sbjct: 1128947 ccatgaagcatatcatgaagagaacccatagtcgcaaactcataagcaaggacacggaga 1128888
Query: 909 gtcccatcagcacagtaaccaagcaactcgacaacattttcatgcttcagccttgacacc 968
| |||||| |||| |||||||||| ||| ||||||| ||||||||| ||||| ||||||
Sbjct: 1128887 tttccatcaacacaataaccaagcagctcaacaacatgttcatgcttaagcctcgacacc 1128828
Query: 969 atagacacctg 979
||||| |||||
Sbjct: 1128827 atagatacctg 1128817
Score = 115 bits (58), Expect = 5e-023
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 363 acagctttaggaggatagtcccctccaagtcttgagtcaacacactgtctaaccttgtct 422
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 1129730 acagctttaggaggatagtcccctccaagtcttgagtcaacacattgcctaaccttgtct 1129671
Query: 423 tcgctaagtcttgg 436
|| ||||| |||||
Sbjct: 1129670 tcactaagccttgg 1129657
Score = 81.8 bits (41), Expect = 8e-013
Identities = 115/140 (82%), Gaps = 6/140 (4%)
Strand = Plus / Minus
Query: 218 ttatgacccagcatgttctccagggttagtcgcccgcgcatgcgcattcagcaggggttg 277
||||||||| |||| ||||||||||||||| ||||| |||| |||||||||||||
Sbjct: 1130157 ttatgacccggcattttctccagggttagttgcccgagcat------tcagcaggggttg 1130104
Query: 278 tagcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaa 337
||||| || || |||||||||||||| || || ||||||||||| || ||||| || ||
Sbjct: 1130103 cagcgctttcacgacaatgctcatgtttggtcgaaagtccgcttcatactgaacgcataa 1130044
Query: 338 ggcggcgacagccgcaaact 357
|| || ||||| |||||||
Sbjct: 1130043 cgccgcaacagctgcaaact 1130024
Score = 46.1 bits (23), Expect = 0.042
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 509 ctcaagaagaacaaccccaaaactatatacatcactctt 547
|||||| |||| ||||||||||||||| |||||| ||||
Sbjct: 493113 ctcaagtagaaaaaccccaaaactatagacatcagtctt 493075
>gb|AC093490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1127_B08,
complete sequence
Length = 112268
Score = 317 bits (160), Expect = 7e-084
Identities = 250/280 (89%)
Strand = Plus / Minus
Query: 571 catactcaggcgcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctg 630
|||||||||| ||||| ||||| || ||||| ||||||||||| ||||||||||||||||
Sbjct: 5790 catactcaggtgcatgatatccaaaggttccaagaaccctagtagagtgaagccgagctg 5731
Query: 631 ccatgtcaggagcttggttcgacagatcaaagtcagcgatcttagctacatcgtcatcga 690
||||||||||||||||||| |||| |||||||||||| || ||||| ||||| |||||||
Sbjct: 5730 ccatgtcaggagcttggtttgacaaatcaaagtcagctattttagcaacatcatcatcga 5671
Query: 691 aaagaaggacgttgctagacttgatgtctcggtgtatgatatggggctgcgctttctcat 750
|||| || || ||||| ||||||||||| | |||||||||||| ||||| ||||||||||
Sbjct: 5670 aaaggagaacattgctggacttgatgtccctgtgtatgatatgaggctgtgctttctcat 5611
Query: 751 gaagatactcgaggcctttcgctgccccaaccgctatcttcacacgttgcgaccacgata 810
|||||||||| |||||||| ||||||||||| ||||||||||||||||| | ||| ||||
Sbjct: 5610 gaagatactccaggccttttgctgccccaacagctatcttcacacgttgtgcccatgata 5551
Query: 811 agactggaccgggttgagcccctttaacccctttccttcc 850
|||||||||| |||||||| |||||||| || ||||||||
Sbjct: 5550 agactggaccaggttgagctcctttaacacccttccttcc 5511
Score = 157 bits (79), Expect = 2e-035
Identities = 136/155 (87%)
Strand = Plus / Minus
Query: 975 acctgggccaagaactcttggtctggctgcttgttagaatccaactttttgaccgcggca 1034
||||| ||||| || ||||||||||||||||| |||| || | |||||||||||| |||
Sbjct: 5191 acctgtgccaaaaattcttggtctggctgcttactagagtctagctttttgaccgctgca 5132
Query: 1035 ctcctaccatttcttagaacacccaagtatactctgccaaaggatccctcaccaatcaaa 1094
|| |||||||||||||||||||| || || |||||||||||||| || ||||||||||||
Sbjct: 5131 cttctaccatttcttagaacaccaaaatacactctgccaaaggaaccttcaccaatcaaa 5072
Query: 1095 gcttcatcaccaaaacccttggtcacctccctaat 1129
||||||||||||||| ||| ||||| ||||||||
Sbjct: 5071 gcttcatcaccaaaattcttagtcacttccctaat 5037
Score = 155 bits (78), Expect = 6e-035
Identities = 120/134 (89%)
Strand = Plus / Minus
Query: 442 cccaggtcacaagactctgctgtccccttggcaatgtatggtcgacaggtttcctcccag 501
|||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| || |
Sbjct: 6000 cccaagtcacaagactctgctgtccccttggtaatgtatggtcaacaggtttccttccgg 5941
Query: 502 tcaacagctcaagaagaacaaccccaaaactatatacatcactcttagagctgagttgcc 561
|||| ||||||||||||||||| |||||||| || ||||||||||| ||||| || || |
Sbjct: 5940 tcaatagctcaagaagaacaactccaaaactgtacacatcactcttggagctaagctgtc 5881
Query: 562 cagtcatcgcatac 575
||||||| ||||||
Sbjct: 5880 cagtcattgcatac 5867
Score = 133 bits (67), Expect = 2e-028
Identities = 115/131 (87%)
Strand = Plus / Minus
Query: 849 ccatgaagcatatcatgaagggaacccattgtagcgaactcataagcaaggacgcggagt 908
|||||||||||||||||||| |||||||| || || ||||||||||||||||| |||||
Sbjct: 5393 ccatgaagcatatcatgaagagaacccatagtcgcaaactcataagcaaggacacggaga 5334
Query: 909 gtcccatcagcacagtaaccaagcaactcgacaacattttcatgcttcagccttgacacc 968
| |||||| |||| |||||||||| ||| ||||||| ||||||||| ||||| ||||||
Sbjct: 5333 tttccatcaacacaataaccaagcagctcaacaacatgttcatgcttaagcctcgacacc 5274
Query: 969 atagacacctg 979
||||| |||||
Sbjct: 5273 atagatacctg 5263
Score = 115 bits (58), Expect = 5e-023
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 363 acagctttaggaggatagtcccctccaagtcttgagtcaacacactgtctaaccttgtct 422
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 6176 acagctttaggaggatagtcccctccaagtcttgagtcaacacattgcctaaccttgtct 6117
Query: 423 tcgctaagtcttgg 436
|| ||||| |||||
Sbjct: 6116 tcactaagccttgg 6103
Score = 81.8 bits (41), Expect = 8e-013
Identities = 115/140 (82%), Gaps = 6/140 (4%)
Strand = Plus / Minus
Query: 218 ttatgacccagcatgttctccagggttagtcgcccgcgcatgcgcattcagcaggggttg 277
||||||||| |||| ||||||||||||||| ||||| |||| |||||||||||||
Sbjct: 6603 ttatgacccggcattttctccagggttagttgcccgagcat------tcagcaggggttg 6550
Query: 278 tagcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaa 337
||||| || || |||||||||||||| || || ||||||||||| || ||||| || ||
Sbjct: 6549 cagcgctttcacgacaatgctcatgtttggtcgaaagtccgcttcatactgaacgcataa 6490
Query: 338 ggcggcgacagccgcaaact 357
|| || ||||| |||||||
Sbjct: 6489 cgccgcaacagctgcaaact 6470
>gb|CH401191.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000028 genomic
scaffold, whole genome shotgun sequence
Length = 7678539
Score = 317 bits (160), Expect = 7e-084
Identities = 250/280 (89%)
Strand = Plus / Minus
Query: 571 catactcaggcgcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctg 630
|||||||||| ||||| ||||| || ||||| ||||||||||| ||||||||||||||||
Sbjct: 2050294 catactcaggtgcatgatatccaaaggttccaagaaccctagtagagtgaagccgagctg 2050235
Query: 631 ccatgtcaggagcttggttcgacagatcaaagtcagcgatcttagctacatcgtcatcga 690
||||||||||||||||||| |||| |||||||||||| || ||||| ||||| |||||||
Sbjct: 2050234 ccatgtcaggagcttggtttgacaaatcaaagtcagctattttagcaacatcatcatcga 2050175
Query: 691 aaagaaggacgttgctagacttgatgtctcggtgtatgatatggggctgcgctttctcat 750
|||| || || ||||| ||||||||||| | |||||||||||| ||||| ||||||||||
Sbjct: 2050174 aaaggagaacattgctggacttgatgtccctgtgtatgatatgaggctgtgctttctcat 2050115
Query: 751 gaagatactcgaggcctttcgctgccccaaccgctatcttcacacgttgcgaccacgata 810
|||||||||| |||||||| ||||||||||| ||||||||||||||||| | ||| ||||
Sbjct: 2050114 gaagatactccaggccttttgctgccccaacagctatcttcacacgttgtgcccatgata 2050055
Query: 811 agactggaccgggttgagcccctttaacccctttccttcc 850
|||||||||| |||||||| |||||||| || ||||||||
Sbjct: 2050054 agactggaccaggttgagctcctttaacacccttccttcc 2050015
Score = 157 bits (79), Expect = 2e-035
Identities = 136/155 (87%)
Strand = Plus / Minus
Query: 975 acctgggccaagaactcttggtctggctgcttgttagaatccaactttttgaccgcggca 1034
||||| ||||| || ||||||||||||||||| |||| || | |||||||||||| |||
Sbjct: 2049695 acctgtgccaaaaattcttggtctggctgcttactagagtctagctttttgaccgctgca 2049636
Query: 1035 ctcctaccatttcttagaacacccaagtatactctgccaaaggatccctcaccaatcaaa 1094
|| |||||||||||||||||||| || || |||||||||||||| || ||||||||||||
Sbjct: 2049635 cttctaccatttcttagaacaccaaaatacactctgccaaaggaaccttcaccaatcaaa 2049576
Query: 1095 gcttcatcaccaaaacccttggtcacctccctaat 1129
||||||||||||||| ||| ||||| ||||||||
Sbjct: 2049575 gcttcatcaccaaaattcttagtcacttccctaat 2049541
Score = 155 bits (78), Expect = 6e-035
Identities = 120/134 (89%)
Strand = Plus / Minus
Query: 442 cccaggtcacaagactctgctgtccccttggcaatgtatggtcgacaggtttcctcccag 501
|||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| || |
Sbjct: 2050504 cccaagtcacaagactctgctgtccccttggtaatgtatggtcaacaggtttccttccgg 2050445
Query: 502 tcaacagctcaagaagaacaaccccaaaactatatacatcactcttagagctgagttgcc 561
|||| ||||||||||||||||| |||||||| || ||||||||||| ||||| || || |
Sbjct: 2050444 tcaatagctcaagaagaacaactccaaaactgtacacatcactcttggagctaagctgtc 2050385
Query: 562 cagtcatcgcatac 575
||||||| ||||||
Sbjct: 2050384 cagtcattgcatac 2050371
Score = 133 bits (67), Expect = 2e-028
Identities = 115/131 (87%)
Strand = Plus / Minus
Query: 849 ccatgaagcatatcatgaagggaacccattgtagcgaactcataagcaaggacgcggagt 908
|||||||||||||||||||| |||||||| || || ||||||||||||||||| |||||
Sbjct: 2049897 ccatgaagcatatcatgaagagaacccatagtcgcaaactcataagcaaggacacggaga 2049838
Query: 909 gtcccatcagcacagtaaccaagcaactcgacaacattttcatgcttcagccttgacacc 968
| |||||| |||| |||||||||| ||| ||||||| ||||||||| ||||| ||||||
Sbjct: 2049837 tttccatcaacacaataaccaagcagctcaacaacatgttcatgcttaagcctcgacacc 2049778
Query: 969 atagacacctg 979
||||| |||||
Sbjct: 2049777 atagatacctg 2049767
Score = 115 bits (58), Expect = 5e-023
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 363 acagctttaggaggatagtcccctccaagtcttgagtcaacacactgtctaaccttgtct 422
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 2050680 acagctttaggaggatagtcccctccaagtcttgagtcaacacattgcctaaccttgtct 2050621
Query: 423 tcgctaagtcttgg 436
|| ||||| |||||
Sbjct: 2050620 tcactaagccttgg 2050607
Score = 81.8 bits (41), Expect = 8e-013
Identities = 115/140 (82%), Gaps = 6/140 (4%)
Strand = Plus / Minus
Query: 218 ttatgacccagcatgttctccagggttagtcgcccgcgcatgcgcattcagcaggggttg 277
||||||||| |||| ||||||||||||||| ||||| |||| |||||||||||||
Sbjct: 2051107 ttatgacccggcattttctccagggttagttgcccgagcat------tcagcaggggttg 2051054
Query: 278 tagcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaa 337
||||| || || |||||||||||||| || || ||||||||||| || ||||| || ||
Sbjct: 2051053 cagcgctttcacgacaatgctcatgtttggtcgaaagtccgcttcatactgaacgcataa 2050994
Query: 338 ggcggcgacagccgcaaact 357
|| || ||||| |||||||
Sbjct: 2050993 cgccgcaacagctgcaaact 2050974
Score = 46.1 bits (23), Expect = 0.042
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 509 ctcaagaagaacaaccccaaaactatatacatcactctt 547
|||||| |||| ||||||||||||||| |||||| ||||
Sbjct: 1400386 ctcaagtagaaaaaccccaaaactatagacatcagtctt 1400348
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 317 bits (160), Expect = 7e-084
Identities = 250/280 (89%)
Strand = Plus / Minus
Query: 571 catactcaggcgcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctg 630
|||||||||| ||||| ||||| || ||||| ||||||||||| ||||||||||||||||
Sbjct: 2050294 catactcaggtgcatgatatccaaaggttccaagaaccctagtagagtgaagccgagctg 2050235
Query: 631 ccatgtcaggagcttggttcgacagatcaaagtcagcgatcttagctacatcgtcatcga 690
||||||||||||||||||| |||| |||||||||||| || ||||| ||||| |||||||
Sbjct: 2050234 ccatgtcaggagcttggtttgacaaatcaaagtcagctattttagcaacatcatcatcga 2050175
Query: 691 aaagaaggacgttgctagacttgatgtctcggtgtatgatatggggctgcgctttctcat 750
|||| || || ||||| ||||||||||| | |||||||||||| ||||| ||||||||||
Sbjct: 2050174 aaaggagaacattgctggacttgatgtccctgtgtatgatatgaggctgtgctttctcat 2050115
Query: 751 gaagatactcgaggcctttcgctgccccaaccgctatcttcacacgttgcgaccacgata 810
|||||||||| |||||||| ||||||||||| ||||||||||||||||| | ||| ||||
Sbjct: 2050114 gaagatactccaggccttttgctgccccaacagctatcttcacacgttgtgcccatgata 2050055
Query: 811 agactggaccgggttgagcccctttaacccctttccttcc 850
|||||||||| |||||||| |||||||| || ||||||||
Sbjct: 2050054 agactggaccaggttgagctcctttaacacccttccttcc 2050015
Score = 157 bits (79), Expect = 2e-035
Identities = 136/155 (87%)
Strand = Plus / Minus
Query: 975 acctgggccaagaactcttggtctggctgcttgttagaatccaactttttgaccgcggca 1034
||||| ||||| || ||||||||||||||||| |||| || | |||||||||||| |||
Sbjct: 2049695 acctgtgccaaaaattcttggtctggctgcttactagagtctagctttttgaccgctgca 2049636
Query: 1035 ctcctaccatttcttagaacacccaagtatactctgccaaaggatccctcaccaatcaaa 1094
|| |||||||||||||||||||| || || |||||||||||||| || ||||||||||||
Sbjct: 2049635 cttctaccatttcttagaacaccaaaatacactctgccaaaggaaccttcaccaatcaaa 2049576
Query: 1095 gcttcatcaccaaaacccttggtcacctccctaat 1129
||||||||||||||| ||| ||||| ||||||||
Sbjct: 2049575 gcttcatcaccaaaattcttagtcacttccctaat 2049541
Score = 155 bits (78), Expect = 6e-035
Identities = 120/134 (89%)
Strand = Plus / Minus
Query: 442 cccaggtcacaagactctgctgtccccttggcaatgtatggtcgacaggtttcctcccag 501
|||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| || |
Sbjct: 2050504 cccaagtcacaagactctgctgtccccttggtaatgtatggtcaacaggtttccttccgg 2050445
Query: 502 tcaacagctcaagaagaacaaccccaaaactatatacatcactcttagagctgagttgcc 561
|||| ||||||||||||||||| |||||||| || ||||||||||| ||||| || || |
Sbjct: 2050444 tcaatagctcaagaagaacaactccaaaactgtacacatcactcttggagctaagctgtc 2050385
Query: 562 cagtcatcgcatac 575
||||||| ||||||
Sbjct: 2050384 cagtcattgcatac 2050371
Score = 133 bits (67), Expect = 2e-028
Identities = 115/131 (87%)
Strand = Plus / Minus
Query: 849 ccatgaagcatatcatgaagggaacccattgtagcgaactcataagcaaggacgcggagt 908
|||||||||||||||||||| |||||||| || || ||||||||||||||||| |||||
Sbjct: 2049897 ccatgaagcatatcatgaagagaacccatagtcgcaaactcataagcaaggacacggaga 2049838
Query: 909 gtcccatcagcacagtaaccaagcaactcgacaacattttcatgcttcagccttgacacc 968
| |||||| |||| |||||||||| ||| ||||||| ||||||||| ||||| ||||||
Sbjct: 2049837 tttccatcaacacaataaccaagcagctcaacaacatgttcatgcttaagcctcgacacc 2049778
Query: 969 atagacacctg 979
||||| |||||
Sbjct: 2049777 atagatacctg 2049767
Score = 115 bits (58), Expect = 5e-023
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 363 acagctttaggaggatagtcccctccaagtcttgagtcaacacactgtctaaccttgtct 422
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 2050680 acagctttaggaggatagtcccctccaagtcttgagtcaacacattgcctaaccttgtct 2050621
Query: 423 tcgctaagtcttgg 436
|| ||||| |||||
Sbjct: 2050620 tcactaagccttgg 2050607
Score = 81.8 bits (41), Expect = 8e-013
Identities = 115/140 (82%), Gaps = 6/140 (4%)
Strand = Plus / Minus
Query: 218 ttatgacccagcatgttctccagggttagtcgcccgcgcatgcgcattcagcaggggttg 277
||||||||| |||| ||||||||||||||| ||||| |||| |||||||||||||
Sbjct: 2051107 ttatgacccggcattttctccagggttagttgcccgagcat------tcagcaggggttg 2051054
Query: 278 tagcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaa 337
||||| || || |||||||||||||| || || ||||||||||| || ||||| || ||
Sbjct: 2051053 cagcgctttcacgacaatgctcatgtttggtcgaaagtccgcttcatactgaacgcataa 2050994
Query: 338 ggcggcgacagccgcaaact 357
|| || ||||| |||||||
Sbjct: 2050993 cgccgcaacagctgcaaact 2050974
Score = 46.1 bits (23), Expect = 0.042
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 509 ctcaagaagaacaaccccaaaactatatacatcactctt 547
|||||| |||| ||||||||||||||| |||||| ||||
Sbjct: 1400386 ctcaagtagaaaaaccccaaaactatagacatcagtctt 1400348
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 317 bits (160), Expect = 7e-084
Identities = 250/280 (89%)
Strand = Plus / Minus
Query: 571 catactcaggcgcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctg 630
|||||||||| ||||| ||||| || ||||| ||||||||||| ||||||||||||||||
Sbjct: 2038949 catactcaggtgcatgatatccaaaggttccaagaaccctagtagagtgaagccgagctg 2038890
Query: 631 ccatgtcaggagcttggttcgacagatcaaagtcagcgatcttagctacatcgtcatcga 690
||||||||||||||||||| |||| |||||||||||| || ||||| ||||| |||||||
Sbjct: 2038889 ccatgtcaggagcttggtttgacaaatcaaagtcagctattttagcaacatcatcatcga 2038830
Query: 691 aaagaaggacgttgctagacttgatgtctcggtgtatgatatggggctgcgctttctcat 750
|||| || || ||||| ||||||||||| | |||||||||||| ||||| ||||||||||
Sbjct: 2038829 aaaggagaacattgctggacttgatgtccctgtgtatgatatgaggctgtgctttctcat 2038770
Query: 751 gaagatactcgaggcctttcgctgccccaaccgctatcttcacacgttgcgaccacgata 810
|||||||||| |||||||| ||||||||||| ||||||||||||||||| | ||| ||||
Sbjct: 2038769 gaagatactccaggccttttgctgccccaacagctatcttcacacgttgtgcccatgata 2038710
Query: 811 agactggaccgggttgagcccctttaacccctttccttcc 850
|||||||||| |||||||| |||||||| || ||||||||
Sbjct: 2038709 agactggaccaggttgagctcctttaacacccttccttcc 2038670
Score = 157 bits (79), Expect = 2e-035
Identities = 136/155 (87%)
Strand = Plus / Minus
Query: 975 acctgggccaagaactcttggtctggctgcttgttagaatccaactttttgaccgcggca 1034
||||| ||||| || ||||||||||||||||| |||| || | |||||||||||| |||
Sbjct: 2038350 acctgtgccaaaaattcttggtctggctgcttactagagtctagctttttgaccgctgca 2038291
Query: 1035 ctcctaccatttcttagaacacccaagtatactctgccaaaggatccctcaccaatcaaa 1094
|| |||||||||||||||||||| || || |||||||||||||| || ||||||||||||
Sbjct: 2038290 cttctaccatttcttagaacaccaaaatacactctgccaaaggaaccttcaccaatcaaa 2038231
Query: 1095 gcttcatcaccaaaacccttggtcacctccctaat 1129
||||||||||||||| ||| ||||| ||||||||
Sbjct: 2038230 gcttcatcaccaaaattcttagtcacttccctaat 2038196
Score = 155 bits (78), Expect = 6e-035
Identities = 120/134 (89%)
Strand = Plus / Minus
Query: 442 cccaggtcacaagactctgctgtccccttggcaatgtatggtcgacaggtttcctcccag 501
|||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| || |
Sbjct: 2039159 cccaagtcacaagactctgctgtccccttggtaatgtatggtcaacaggtttccttccgg 2039100
Query: 502 tcaacagctcaagaagaacaaccccaaaactatatacatcactcttagagctgagttgcc 561
|||| ||||||||||||||||| |||||||| || ||||||||||| ||||| || || |
Sbjct: 2039099 tcaatagctcaagaagaacaactccaaaactgtacacatcactcttggagctaagctgtc 2039040
Query: 562 cagtcatcgcatac 575
||||||| ||||||
Sbjct: 2039039 cagtcattgcatac 2039026
Score = 133 bits (67), Expect = 2e-028
Identities = 115/131 (87%)
Strand = Plus / Minus
Query: 849 ccatgaagcatatcatgaagggaacccattgtagcgaactcataagcaaggacgcggagt 908
|||||||||||||||||||| |||||||| || || ||||||||||||||||| |||||
Sbjct: 2038552 ccatgaagcatatcatgaagagaacccatagtcgcaaactcataagcaaggacacggaga 2038493
Query: 909 gtcccatcagcacagtaaccaagcaactcgacaacattttcatgcttcagccttgacacc 968
| |||||| |||| |||||||||| ||| ||||||| ||||||||| ||||| ||||||
Sbjct: 2038492 tttccatcaacacaataaccaagcagctcaacaacatgttcatgcttaagcctcgacacc 2038433
Query: 969 atagacacctg 979
||||| |||||
Sbjct: 2038432 atagatacctg 2038422
Score = 115 bits (58), Expect = 5e-023
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 363 acagctttaggaggatagtcccctccaagtcttgagtcaacacactgtctaaccttgtct 422
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 2039335 acagctttaggaggatagtcccctccaagtcttgagtcaacacattgcctaaccttgtct 2039276
Query: 423 tcgctaagtcttgg 436
|| ||||| |||||
Sbjct: 2039275 tcactaagccttgg 2039262
Score = 81.8 bits (41), Expect = 8e-013
Identities = 115/140 (82%), Gaps = 6/140 (4%)
Strand = Plus / Minus
Query: 218 ttatgacccagcatgttctccagggttagtcgcccgcgcatgcgcattcagcaggggttg 277
||||||||| |||| ||||||||||||||| ||||| |||| |||||||||||||
Sbjct: 2039762 ttatgacccggcattttctccagggttagttgcccgagcat------tcagcaggggttg 2039709
Query: 278 tagcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaa 337
||||| || || |||||||||||||| || || ||||||||||| || ||||| || ||
Sbjct: 2039708 cagcgctttcacgacaatgctcatgtttggtcgaaagtccgcttcatactgaacgcataa 2039649
Query: 338 ggcggcgacagccgcaaact 357
|| || ||||| |||||||
Sbjct: 2039648 cgccgcaacagctgcaaact 2039629
Score = 46.1 bits (23), Expect = 0.042
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 509 ctcaagaagaacaaccccaaaactatatacatcactctt 547
|||||| |||| ||||||||||||||| |||||| ||||
Sbjct: 1402716 ctcaagtagaaaaaccccaaaactatagacatcagtctt 1402678
>gb|CV724064.1|CV724064 root--05-L04.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone
root--05-L04, mRNA sequence
Length = 484
Score = 309 bits (156), Expect = 2e-081
Identities = 252/284 (88%)
Strand = Plus / Plus
Query: 261 gcattcagcaggggttgtagcgccttgacaacaatgctcatgttcggccggaagtccgct 320
||||||||||||||||| ||||| || || |||||||||||||| || || |||||||||
Sbjct: 201 gcattcagcaggggttgcagcgctttcacgacaatgctcatgtttggtcgaaagtccgct 260
Query: 321 tcgtattgaacacacaaggcggcgacagccgcaaacttcgcaacagctttaggaggatag 380
|| || ||||| || || || || ||||| |||||||| || ||||||||||||||||||
Sbjct: 261 tcatactgaacgcataacgccgcaacagctgcaaactttgcgacagctttaggaggatag 320
Query: 381 tcccctccaagtcttgagtcaacacactgtctaaccttgtcttcgctaagtcttggtgta 440
|||||||||||||||||||||||||| || |||||||||||||| ||||| ||||| ||
Sbjct: 321 tcccctccaagtcttgagtcaacacattgcctaaccttgtcttcactaagccttggggtg 380
Query: 441 gcccaggtcacaagactctgctgtccccttggcaatgtatggtcgacaggtttcctccca 500
||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||
Sbjct: 381 gcccaagtcacaagactctgctgtccccttggtaatgtatggtcaacaggtttccttccg 440
Query: 501 gtcaacagctcaagaagaacaaccccaaaactatatacatcact 544
||||| ||||||||||||||||| |||||||| || ||||||||
Sbjct: 441 gtcaatagctcaagaagaacaactccaaaactgtacacatcact 484
>gb|CF316206.1|CF316206 HD--05-G14.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--05-G14, mRNA sequence
Length = 542
Score = 260 bits (131), Expect = 1e-066
Identities = 242/279 (86%)
Strand = Plus / Minus
Query: 851 atgaagcatatcatgaagggaacccattgtagcgaactcataagcaaggacgcggagtgt 910
|||||||||||||||||| |||||||| || || ||||||||||||||||| ||||| |
Sbjct: 542 atgaagcatatcatgaagagaacccatagtcgcaaactcataagcaaggacacggagatt 483
Query: 911 cccatcagcacagtaaccaagcaactcgacaacattttcatgcttcagccttgacaccat 970
|||||| |||| |||||||||| ||| ||||||| ||||||||| ||||| ||||||||
Sbjct: 482 tccatcaacacaataaccaagcagctcaacaacatgttcatgcttaagcctcgacaccat 423
Query: 971 agacacctgggccaagaactcttggtctggctgcttgttagaatccaactttttgaccgc 1030
|||||| || ||||| || ||||||||||||||||| |||| || | |||||||| |||
Sbjct: 422 agacacttgtgccaaaaattcttggtctggctgcttactagagtctagctttttgatcgc 363
Query: 1031 ggcactcctaccatttcttagaacacccaagtatactctgccaaaggatccctcaccaat 1090
||||| |||||||||||||||||||| || || |||||||||||||| || ||||||||
Sbjct: 362 tgcacttctaccatttcttagaacaccaaaatacactctgccaaaggaaccttcaccaat 303
Query: 1091 caaagcttcatcaccaaaacccttggtcacctccctaat 1129
|||||||||||| |||||| ||| ||||| ||||||||
Sbjct: 302 caaagcttcatcgccaaaattcttagtcacttccctaat 264
>gb|CA755064.1|CA755064 BR030012000_PLATE_C01_3_002.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030012000_PLATE_C01_3_002.ab1 similar to Pto kinase
interactor 1 [Lycopersicon esculentum], mRNA sequence
Length = 616
Score = 206 bits (104), Expect = 2e-050
Identities = 233/276 (84%)
Strand = Plus / Minus
Query: 834 ttaacccctttccttccatgaagcatatcatgaagggaacccattgtagcgaactcataa 893
||||| || ||| |||| ||||||||||||||||| || || || || |||||||||
Sbjct: 601 ttaacacccttcgttccgtgaagcatatcatgaagagacccgatatccgcaaactcataa 542
Query: 894 gcaaggacgcggagtgtcccatcagcacagtaaccaagcaactcgacaacattttcatgc 953
||||| || ||| | | |||||| | || |||||||||| ||| ||||||| |||||||
Sbjct: 541 gcaagtacacggggatttccatcaacgcaataaccaagcagctcaacaacatgttcatgc 482
Query: 954 ttcagccttgacaccatagacacctgggccaagaactcttggtctggctgcttgttagaa 1013
|| ||||| ||||||||||| ||||| ||||| || ||||||||||||||||| ||||
Sbjct: 481 ttaagcctcgacaccatagatacctgtgccaaaaattcttggtctggctgcttactagag 422
Query: 1014 tccaactttttgaccgcggcactcctaccatttcttagaacacccaagtatactctgcca 1073
|| | |||||||||||| ||||| ||||||| |||||||||||| || || |||||||||
Sbjct: 421 tctagctttttgaccgctgcacttctaccatgtcttagaacaccaaaatacactctgcca 362
Query: 1074 aaggatccctcaccaatcaaagcttcatcaccaaaa 1109
||||| || |||||||||||||||||||||||||||
Sbjct: 361 aaggaaccttcaccaatcaaagcttcatcaccaaaa 326
>gb|CB641895.1|CB641895 OSJNEb01M15.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb01M15 5', mRNA sequence
Length = 828
Score = 196 bits (99), Expect = 2e-047
Identities = 168/191 (87%)
Strand = Plus / Minus
Query: 939 acaacattttcatgcttcagccttgacaccatagacacctgggccaagaactcttggtct 998
||||||| ||||||||| ||||| ||||||||||| ||||| ||||| || |||||||||
Sbjct: 820 acaacatgttcatgcttaagcctcgacaccatagatacctgtgccaaaaattcttggtct 761
Query: 999 ggctgcttgttagaatccaactttttgaccgcggcactcctaccatttcttagaacaccc 1058
|||||||| |||| || | |||||||||||| ||||| ||||||||||||||||||||
Sbjct: 760 ggctgcttactagagtctagctttttgaccgctgcacttctaccatttcttagaacacca 701
Query: 1059 aagtatactctgccaaaggatccctcaccaatcaaagcttcatcaccaaaacccttggtc 1118
|| || |||||||||||||| || ||||||||||||||||||||||||||| ||| |||
Sbjct: 700 aaatacactctgccaaaggaaccttcaccaatcaaagcttcatcaccaaaattcttagtc 641
Query: 1119 acctccctaat 1129
|| ||||||||
Sbjct: 640 acttccctaat 630
>gb|CF569138.1|CF569138 EST00B09 Subtracted cDNA library of JA/BTH-treated rice leaf Oryza
sativa (japonica cultivar-group) cDNA clone JBI52, mRNA
sequence
Length = 782
Score = 172 bits (87), Expect = 3e-040
Identities = 173/202 (85%), Gaps = 6/202 (2%)
Strand = Plus / Plus
Query: 218 ttatgacccagcatgttctccagggttagtcgcccgcgcatgcgcattcagcaggggttg 277
||||||||| |||| ||||||||||||||| ||||| |||| |||||||||||||
Sbjct: 98 ttatgacccggcattttctccagggttagttgcccgagcat------tcagcaggggttg 151
Query: 278 tagcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaa 337
||||| || || |||||||||||||| || || ||||||||||| || ||||| || ||
Sbjct: 152 cagcgctttcacgacaatgctcatgtttggtcgaaagtccgcttcatactgaacgcataa 211
Query: 338 ggcggcgacagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttga 397
|| || ||||| |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 212 cgccgcaacagctgcaaactttgcgacagctttaggaggatagtcccctccaagtcttga 271
Query: 398 gtcaacacactgtctaaccttg 419
||||||||| || |||||||||
Sbjct: 272 gtcaacacattgcctaaccttg 293
>dbj|AG206448.1| Oryza sativa (japonica cultivar-group) DNA, clone:ND5001_3_501_1A, 3'
flanking sequence of Tos17 insertion in rice strain
ND5001, genomic survey sequence
Length = 626
Score = 157 bits (79), Expect = 2e-035
Identities = 136/155 (87%)
Strand = Plus / Plus
Query: 975 acctgggccaagaactcttggtctggctgcttgttagaatccaactttttgaccgcggca 1034
||||| ||||| || ||||||||||||||||| |||| || | |||||||||||| |||
Sbjct: 173 acctgtgccaaaaattcttggtctggctgcttactagagtctagctttttgaccgctgca 232
Query: 1035 ctcctaccatttcttagaacacccaagtatactctgccaaaggatccctcaccaatcaaa 1094
|| |||||||||||||||||||| || || |||||||||||||| || ||||||||||||
Sbjct: 233 cttctaccatttcttagaacaccaaaatacactctgccaaaggaaccttcaccaatcaaa 292
Query: 1095 gcttcatcaccaaaacccttggtcacctccctaat 1129
||||||||||||||| ||| ||||| ||||||||
Sbjct: 293 gcttcatcaccaaaattcttagtcacttccctaat 327
Score = 93.7 bits (47), Expect = 2e-016
Identities = 83/95 (87%)
Strand = Plus / Plus
Query: 885 aactcataagcaaggacgcggagtgtcccatcagcacagtaaccaagcaactcgacaaca 944
||||||||||||||||| ||||| | |||||| |||| |||||||||| ||| ||||||
Sbjct: 7 aactcataagcaaggacacggagatttccatcaacacaataaccaagcagctcaacaaca 66
Query: 945 ttttcatgcttcagccttgacaccatagacacctg 979
| ||||||||| ||||| ||||||||||| |||||
Sbjct: 67 tgttcatgcttaagcctcgacaccatagatacctg 101
>dbj|AK065231.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H11, full
insert sequence
Length = 1811
Score = 103 bits (52), Expect = 2e-019
Identities = 280/356 (78%)
Strand = Plus / Minus
Query: 282 gccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaaggcg 341
|||||||| || ||||||||||| |||| ||||||||| ||||| || || |||| ||
Sbjct: 1396 gccttgacgacgatgctcatgttgggcctgaagtccgcctcgtactgcacgcacagcgca 1337
Query: 342 gcgacagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttgagtca 401
|| || || || | ||| |||||||| || |||||||| |||||| |||| |||| ||
Sbjct: 1336 gctacggcagccatcttggcaacagccttgggaggataatccccttcaagccttggatcc 1277
Query: 402 acacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgc 461
|| || || | ||||||||||| || || ||||| |||||||| |||||||||||||||
Sbjct: 1276 acgcattgcttcaccttgtcttcacttagccttggagtagcccatgtcacaagactctgc 1217
Query: 462 tgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaagaaca 521
|| || | |||| ||||| ||||| ||||| | ||||| || ||||| || | ||
Sbjct: 1216 tggccacggggcagcgtatgatcgaccggtttgcgaccagttaaaagctccagcaacacg 1157
Query: 522 accccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactcaggc 581
|| || || ||||| ||||| ||||| | ||| || ||||| |||||||| ||||||||
Sbjct: 1156 actccgaagctatagacatcgctcttcgtgctaagctgccctgtcatcgcgtactcagga 1097
Query: 582 gcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctgccatgtc 637
||||| || ||||| || || ||||| | ||| ||||| || ||||| ||||||||
Sbjct: 1096 gcatgataaccgaaggtgccaagaacacgagtggagtggaggcgagccgccatgtc 1041
>ref|NM_183791.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1116
Score = 103 bits (52), Expect = 2e-019
Identities = 280/356 (78%)
Strand = Plus / Minus
Query: 282 gccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaaggcg 341
|||||||| || ||||||||||| |||| ||||||||| ||||| || || |||| ||
Sbjct: 1037 gccttgacgacgatgctcatgttgggcctgaagtccgcctcgtactgcacgcacagcgca 978
Query: 342 gcgacagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttgagtca 401
|| || || || | ||| |||||||| || |||||||| |||||| |||| |||| ||
Sbjct: 977 gctacggcagccatcttggcaacagccttgggaggataatccccttcaagccttggatcc 918
Query: 402 acacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgc 461
|| || || | ||||||||||| || || ||||| |||||||| |||||||||||||||
Sbjct: 917 acgcattgcttcaccttgtcttcacttagccttggagtagcccatgtcacaagactctgc 858
Query: 462 tgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaagaaca 521
|| || | |||| ||||| ||||| ||||| | ||||| || ||||| || | ||
Sbjct: 857 tggccacggggcagcgtatgatcgaccggtttgcgaccagttaaaagctccagcaacacg 798
Query: 522 accccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactcaggc 581
|| || || ||||| ||||| ||||| | ||| || ||||| |||||||| ||||||||
Sbjct: 797 actccgaagctatagacatcgctcttcgtgctaagctgccctgtcatcgcgtactcagga 738
Query: 582 gcatggtatccgaatgttccgagaaccctagttgagtgaagccgagctgccatgtc 637
||||| || ||||| || || ||||| | ||| ||||| || ||||| ||||||||
Sbjct: 737 gcatgataaccgaaggtgccaagaacacgagtggagtggaggcgagccgccatgtc 682
>gb|AU166986.1|AU166986 AU166986 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1540, mRNA sequence
Length = 462
Score = 83.8 bits (42), Expect = 2e-013
Identities = 147/182 (80%)
Strand = Plus / Minus
Query: 282 gccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaaggcg 341
|||||||| || ||||||||||| |||| ||||||||| ||||| || || |||| ||
Sbjct: 223 gccttgacgacgatgctcatgttgggcctgaagtccgcctcgtactgcacgcacagcgca 164
Query: 342 gcgacagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttgagtca 401
|| || || || | ||| |||||||| || |||||||| |||||| |||| |||| ||
Sbjct: 163 gctacggcagccatcttggcaacagccttgggaggataatccccttcaagccttggatcc 104
Query: 402 acacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgc 461
|| || || | ||||||||||| || || ||||| |||||||| |||||||||||||||
Sbjct: 103 acgcattgcttcaccttgtcttcacttagccttggagtagcccatgtcacaagactctgc 44
Query: 462 tg 463
||
Sbjct: 43 tg 42
>gb|D15682.1|D15682 RICC1083A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C1083A, mRNA sequence
Length = 323
Score = 81.8 bits (41), Expect = 8e-013
Identities = 115/140 (82%), Gaps = 6/140 (4%)
Strand = Plus / Minus
Query: 218 ttatgacccagcatgttctccagggttagtcgcccgcgcatgcgcattcagcaggggttg 277
||||||||| |||| ||||||||||||||| ||||| |||| |||||||||||||
Sbjct: 146 ttatgacccggcattttctccagggttagttgcccgagcat------tcagcaggggttg 93
Query: 278 tagcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaa 337
||||| || || |||||||||||||| || || ||||||||||| || ||||| || ||
Sbjct: 92 cagcgctttcacgacaatgctcatgtttggtcgaaagtccgcttcatactgaacgcataa 33
Query: 338 ggcggcgacagccgcaaact 357
|| || ||||| |||||||
Sbjct: 32 cgccgcaacagctgcaaact 13
>gb|AU065436.1|AU065436 AU065436 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3766_1A, mRNA sequence
Length = 454
Score = 75.8 bits (38), Expect = 5e-011
Identities = 80/94 (85%)
Strand = Plus / Minus
Query: 451 caagactctgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagct 510
||||||||||||| ||||| |||| ||| || || || |||||||| || || | ||||
Sbjct: 319 caagactctgctgacccctaggcattgtgtgatctactggtttccttcctgttagaagct 260
Query: 511 caagaagaacaaccccaaaactatatacatcact 544
| ||||||||||| ||||||||||||||||||||
Sbjct: 259 ctagaagaacaactccaaaactatatacatcact 226
>gb|AU108280.1|AU108280 AU108280 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0721, mRNA sequence
Length = 715
Score = 75.8 bits (38), Expect = 5e-011
Identities = 246/314 (78%), Gaps = 1/314 (0%)
Strand = Plus / Minus
Query: 282 gccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaaggcg 341
|||||||| || ||||||||||| |||| ||||||||| ||||| || || |||| ||
Sbjct: 348 gccttgacgacgatgctcatgttgggcctgaagtccgcctcgtactgcacgcacagcgca 289
Query: 342 gcgacagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttgagtca 401
| || || || | ||| |||||||| || |||||||| |||||| |||| |||| ||
Sbjct: 288 -ctacggcagccatcttggcaacagccttgggaggataatccccttcaagccttggatcc 230
Query: 402 acacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgc 461
|| || || | ||||||||||| || || ||||| |||||||| |||||||||||||||
Sbjct: 229 acgcattgcttcaccttgtcttcacttagccttggagtagcccatgtcacaagactctgc 170
Query: 462 tgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaagaaca 521
|| || | |||| ||||| ||||| ||||| | ||||| || ||||| || | ||
Sbjct: 169 tggccacggggcagcgtatgatcgaccggtttgcgaccagttaaaagctccagcaacacg 110
Query: 522 accccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactcaggc 581
|| || || ||||| ||||| ||||| | ||| || ||||| |||||||| ||||||||
Sbjct: 109 actccgaagctatagacatcgctcttcgtgctaagctgccctgtcatcgcgtactcagga 50
Query: 582 gcatggtatccgaa 595
||||| || |||||
Sbjct: 49 gcatgataaccgaa 36
>gb|AU162536.1|AU162536 AU162536 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3849, mRNA sequence
Length = 466
Score = 75.8 bits (38), Expect = 5e-011
Identities = 92/110 (83%)
Strand = Plus / Minus
Query: 435 ggtgtagcccaggtcacaagactctgctgtccccttggcaatgtatggtcgacaggtttc 494
||||| ||||| || || ||||||||||| ||||| |||| ||| || || || ||||||
Sbjct: 335 ggtgttgcccatgtaaccagactctgctgacccctaggcattgtgtgatctactggtttc 276
Query: 495 ctcccagtcaacagctcaagaagaacaaccccaaaactatatacatcact 544
|| || || | ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 275 cttcctgttagaagctctagaagaacaactccaaaactatatacatcact 226
>gb|CV723320.1|CV723320 root--03-D11.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone
root--03-D11, mRNA sequence
Length = 493
Score = 75.8 bits (38), Expect = 5e-011
Identities = 92/110 (83%)
Strand = Plus / Minus
Query: 435 ggtgtagcccaggtcacaagactctgctgtccccttggcaatgtatggtcgacaggtttc 494
||||| ||||| || || ||||||||||| ||||| |||| ||| || || || ||||||
Sbjct: 345 ggtgttgcccatgtaaccagactctgctgacccctaggcattgtgtgatctactggtttc 286
Query: 495 ctcccagtcaacagctcaagaagaacaaccccaaaactatatacatcact 544
|| || || | ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 285 cttcctgttagaagctctagaagaacaactccaaaactatatacatcact 236
>dbj|AK067164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094N20, full
insert sequence
Length = 1641
Score = 75.8 bits (38), Expect = 5e-011
Identities = 110/134 (82%)
Strand = Plus / Minus
Query: 414 accttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgctgtccccttggc 473
|||||||||||||| | ||| || |||||||| || || ||||| |||||||||| |||
Sbjct: 1140 accttgtcttcgcttaatctaggagtagcccaagtgactagactttgctgtccccgaggc 1081
Query: 474 aatgtatggtcgacaggtttcctcccagtcaacagctcaagaagaacaaccccaaaacta 533
| ||| ||||| || |||||||| ||||||| || || | |||||| || ||||||||
Sbjct: 1080 attgtgtggtccactggtttccttccagtcaggagttccaaaagaactacaccaaaactg 1021
Query: 534 tatacatcactctt 547
|| |||||||||||
Sbjct: 1020 tacacatcactctt 1007
Score = 71.9 bits (36), Expect = 7e-010
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 279 agcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacaca 334
|||||||||||||||||||||||||| |||| ||| || ||||||||||| |||||
Sbjct: 1275 agcgccttgacaacaatgctcatgttgggcctgaactctgcttcgtattggacaca 1220
Score = 46.1 bits (23), Expect = 0.042
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 831 cctttaacccctttccttccatgaagcatatcatgaagggaacccat 877
|||| ||| ||||| |||||||| || | ||||||||||||||||||
Sbjct: 723 ccttgaactccttttcttccatggagaacatcatgaagggaacccat 677
Score = 44.1 bits (22), Expect = 0.16
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 919 cacagtaaccaagcaactcgacaacattttcatgcttcagccttga 964
|||||||||| | || ||| |||| |||||||||||| ||||||||
Sbjct: 635 cacagtaacccaacatctccacaagattttcatgctttagccttga 590
>ref|XM_470385.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1640
Score = 75.8 bits (38), Expect = 5e-011
Identities = 110/134 (82%)
Strand = Plus / Minus
Query: 414 accttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgctgtccccttggc 473
|||||||||||||| | ||| || |||||||| || || ||||| |||||||||| |||
Sbjct: 1139 accttgtcttcgcttaatctaggagtagcccaagtgactagactttgctgtccccgaggc 1080
Query: 474 aatgtatggtcgacaggtttcctcccagtcaacagctcaagaagaacaaccccaaaacta 533
| ||| ||||| || |||||||| ||||||| || || | |||||| || ||||||||
Sbjct: 1079 attgtgtggtccactggtttccttccagtcaggagttccaaaagaactacaccaaaactg 1020
Query: 534 tatacatcactctt 547
|| |||||||||||
Sbjct: 1019 tacacatcactctt 1006
Score = 71.9 bits (36), Expect = 7e-010
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 279 agcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacaca 334
|||||||||||||||||||||||||| |||| ||| || ||||||||||| |||||
Sbjct: 1274 agcgccttgacaacaatgctcatgttgggcctgaactctgcttcgtattggacaca 1219
Score = 46.1 bits (23), Expect = 0.042
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 831 cctttaacccctttccttccatgaagcatatcatgaagggaacccat 877
|||| ||| ||||| |||||||| || | ||||||||||||||||||
Sbjct: 722 ccttgaactccttttcttccatggagaacatcatgaagggaacccat 676
Score = 44.1 bits (22), Expect = 0.16
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 919 cacagtaaccaagcaactcgacaacattttcatgcttcagccttga 964
|||||||||| | || ||| |||| |||||||||||| ||||||||
Sbjct: 634 cacagtaacccaacatctccacaagattttcatgctttagccttga 589
>gb|C22473.1|C22473 C22473 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C1083_3Z, mRNA sequence
Length = 446
Score = 71.9 bits (36), Expect = 7e-010
Identities = 94/114 (82%), Gaps = 6/114 (5%)
Strand = Plus / Minus
Query: 218 ttatgacccagcatgttctccagggttagtcgcccgcgcatgcgcattcagcaggggttg 277
||||||||| |||| ||||||||||||||| ||||| |||| |||||||||||||
Sbjct: 240 ttatgacccggcattttctccagggttagttgcccgagcat------tcagcaggggttg 187
Query: 278 tagcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaac 331
||||| || || ||||||||||||| || || ||||||||||| || |||||
Sbjct: 186 cagcgctttcacgncaatgctcatgtttggtcgaaagtccgcttcatactgaac 133
>gb|AU108281.1|AU108281 AU108281 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0812, mRNA sequence
Length = 708
Score = 71.9 bits (36), Expect = 7e-010
Identities = 244/314 (77%)
Strand = Plus / Minus
Query: 282 gccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacacacaaggcg 341
|||||||| || ||||||||||| |||| ||||||||| ||||| || || |||| ||
Sbjct: 355 gccttgacgacgatgctcatgttgggcctgaagtccgcctcgtactgcacgcacagcgca 296
Query: 342 gcgacagccgcaaacttcgcaacagctttaggaggatagtcccctccaagtcttgagtca 401
|| || || | ||| |||||||| || |||||||| |||||| |||| |||| ||
Sbjct: 295 ntaacggcagccatcttggcaacagccttgggaggataatccccttcaagccttggatcc 236
Query: 402 acacactgtctaaccttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgc 461
|| || || | ||||||||||| || || ||||| |||||||| |||||||||||||||
Sbjct: 235 acgcattgcttcaccttgtcttcacttagccttggagtagcccatgtcacaagactctgc 176
Query: 462 tgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctcaagaagaaca 521
|| || | |||| ||||| ||||| ||||| | ||||| || ||||| || | ||
Sbjct: 175 tggccacggggcagcgtatgatcgaccggtttgcgaccagttaaaagctccagcaacacg 116
Query: 522 accccaaaactatatacatcactcttagagctgagttgcccagtcatcgcatactcaggc 581
|| || || ||||| ||||| ||||| | ||| | ||||| |||||||| ||||||||
Sbjct: 115 actccgaagctatagacatcgctcttcgtgctaanctgccctgtcatcgcgtactcagga 56
Query: 582 gcatggtatccgaa 595
||||| || |||||
Sbjct: 55 gcatgataaccgaa 42
>gb|AU108282.1|AU108282 AU108282 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2020, mRNA sequence
Length = 686
Score = 71.9 bits (36), Expect = 7e-010
Identities = 186/236 (78%)
Strand = Plus / Minus
Query: 360 gcaacagctttaggaggatagtcccctccaagtcttgagtcaacacactgtctaaccttg 419
|||||||| || |||||||| |||||| |||| |||| || || || || | ||||||
Sbjct: 254 gcaacagccttgggaggataatccccttcaagccttggatccacgcattgcttcaccttg 195
Query: 420 tcttcgctaagtcttggtgtagcccaggtcacaagactctgctgtccccttggcaatgta 479
||||| || || ||||| |||||||| ||||||||||||||||| || | |||| |||
Sbjct: 194 tcttcacttagccttggagtagcccatgtcacaagactctgctggccacggggcagcgta 135
Query: 480 tggtcgacaggtttcctcccagtcaacagctcaagaagaacaaccccaaaactatataca 539
|| ||||| ||||| | ||||| || ||||| || | || || || || ||||| |||
Sbjct: 134 tgatcgaccggtttgcgaccagttaaaagctccagcaacacgactccgaagctatagaca 75
Query: 540 tcactcttagagctgagttgcccagtcatcgcatactcaggcgcatggtatccgaa 595
|| ||||| | ||| || ||||| |||||||| |||||||| ||||| || |||||
Sbjct: 74 tcgctcttcgtgctaagctgccctgtcatcgcgtactcaggagcatgataaccgaa 19
>gb|CF309692.1|CF309692 ABF--03-P14.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--03-P14, mRNA sequence
Length = 625
Score = 71.9 bits (36), Expect = 7e-010
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 279 agcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacaca 334
|||||||||||||||||||||||||| |||| ||| || ||||||||||| |||||
Sbjct: 428 agcgccttgacaacaatgctcatgttgggcctgaactctgcttcgtattggacaca 483
Score = 46.1 bits (23), Expect = 0.042
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 414 accttgtcttcgctaagtcttggtgtagcccaggtcacaagactctgctgtcccc 468
|||||||||||||| | ||| || |||||||| || || ||||| ||||||||||
Sbjct: 563 accttgtcttcgcttaatctaggagtagcccaagtgactagactttgctgtcccc 617
>gb|CF334306.1|CF334306 JMT--03-I20.g1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--03-I20, mRNA sequence
Length = 543
Score = 71.9 bits (36), Expect = 7e-010
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 279 agcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacaca 334
|||||||||||||||||||||||||| |||| ||| || ||||||||||| |||||
Sbjct: 370 agcgccttgacaacaatgctcatgttgggcctgaactctgcttcgtattggacaca 425
>gb|AC108760.1| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBa0074B03,
*** SEQUENCING IN PROGRESS ***, 4 ordered pieces
Length = 138126
Score = 71.9 bits (36), Expect = 7e-010
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 453 agactctgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctca 512
||||||||||| ||||| |||| ||| || || || |||||||| || || | |||||
Sbjct: 113483 agactctgctgacccctaggcattgtgtgatctactggtttccttcctgttagaagctct 113542
Query: 513 agaagaacaaccccaaaactatatacatcact 544
||||||||||| ||||||||||||||||||||
Sbjct: 113543 agaagaacaactccaaaactatatacatcact 113574
>dbj|AP004138.1| Oryza sativa (japonica cultivar-group) chromosome 9 clone OJ1399_D07,
*** SEQUENCING IN PROGRESS ***
Length = 179094
Score = 71.9 bits (36), Expect = 7e-010
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 453 agactctgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctca 512
||||||||||| ||||| |||| ||| || || || |||||||| || || | |||||
Sbjct: 70007 agactctgctgacccctaggcattgtgtgatctactggtttccttcctgttagaagctct 70066
Query: 513 agaagaacaaccccaaaactatatacatcact 544
||||||||||| ||||||||||||||||||||
Sbjct: 70067 agaagaacaactccaaaactatatacatcact 70098
>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete
sequence
Length = 156606
Score = 71.9 bits (36), Expect = 7e-010
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 279 agcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacaca 334
|||||||||||||||||||||||||| |||| ||| || ||||||||||| |||||
Sbjct: 55936 agcgccttgacaacaatgctcatgttgggcctgaactctgcttcgtattggacaca 55991
Score = 54.0 bits (27), Expect = 2e-004
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 453 agactctgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctca 512
||||| |||||||||| |||| ||| ||||| || |||||||| ||||||| || ||
Sbjct: 57018 agactttgctgtccccgaggcattgtgtggtccactggtttccttccagtcaggagttcc 57077
Query: 513 agaagaacaaccccaaaactatatacatcactctt 547
| |||||| || |||||||| || |||||||||||
Sbjct: 57078 aaaagaactacaccaaaactgtacacatcactctt 57112
Score = 44.1 bits (22), Expect = 0.16
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 919 cacagtaaccaagcaactcgacaacattttcatgcttcagccttga 964
|||||||||| | || ||| |||| |||||||||||| ||||||||
Sbjct: 59445 cacagtaacccaacatctccacaagattttcatgctttagccttga 59490
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
OSJNBa0028C22, complete sequence
Length = 154228
Score = 71.9 bits (36), Expect = 7e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 453 agactctgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctca 512
||||||||||| ||||| |||| ||| || || || |||||||| || || | |||||
Sbjct: 26868 agactctgctgacccctaggcattgtgtgatctactggtttccttcctgttagaagctct 26809
Query: 513 agaagaacaaccccaaaactatatacatcact 544
||||||||||| ||||||||||||||||||||
Sbjct: 26808 agaagaacaactccaaaactatatacatcact 26777
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0450E05
Length = 176553
Score = 71.9 bits (36), Expect = 7e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 453 agactctgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctca 512
||||||||||| ||||| |||| ||| || || || |||||||| || || | |||||
Sbjct: 45287 agactctgctgacccctaggcattgtgtgatctactggtttccttcctgttagaagctct 45228
Query: 513 agaagaacaaccccaaaactatatacatcact 544
||||||||||| ||||||||||||||||||||
Sbjct: 45227 agaagaacaactccaaaactatatacatcact 45196
>ref|NT_107075.1| Oryza sativa (japonica cultivar-group)
Length = 389359
Score = 71.9 bits (36), Expect = 7e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 453 agactctgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctca 512
||||||||||| ||||| |||| ||| || || || |||||||| || || | |||||
Sbjct: 109083 agactctgctgacccctaggcattgtgtgatctactggtttccttcctgttagaagctct 109024
Query: 513 agaagaacaaccccaaaactatatacatcact 544
||||||||||| ||||||||||||||||||||
Sbjct: 109023 agaagaacaactccaaaactatatacatcact 108992
>gb|AACV01001874.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001874, whole
genome shotgun sequence
Length = 57326
Score = 71.9 bits (36), Expect = 7e-010
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 453 agactctgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctca 512
||||||||||| ||||| |||| ||| || || || |||||||| || || | |||||
Sbjct: 41236 agactctgctgacccctaggcattgtgtgatctactggtttccttcctgttagaagctct 41295
Query: 513 agaagaacaaccccaaaactatatacatcact 544
||||||||||| ||||||||||||||||||||
Sbjct: 41296 agaagaacaactccaaaactatatacatcact 41327
>gb|AACV01008246.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg008246, whole
genome shotgun sequence
Length = 67437
Score = 71.9 bits (36), Expect = 7e-010
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 279 agcgccttgacaacaatgctcatgttcggccggaagtccgcttcgtattgaacaca 334
|||||||||||||||||||||||||| |||| ||| || ||||||||||| |||||
Sbjct: 8704 agcgccttgacaacaatgctcatgttgggcctgaactctgcttcgtattggacaca 8649
Score = 54.0 bits (27), Expect = 2e-004
Identities = 78/95 (82%)
Strand = Plus / Minus
Query: 453 agactctgctgtccccttggcaatgtatggtcgacaggtttcctcccagtcaacagctca 512
||||| |||||||||| |||| ||| ||||| || |||||||| ||||||| || ||
Sbjct: 7622 agactttgctgtccccgaggcattgtgtggtccactggtttccttccagtcaggagttcc 7563
Query: 513 agaagaacaaccccaaaactatatacatcactctt 547
| |||||| || |||||||| || |||||||||||
Sbjct: 7562 aaaagaactacaccaaaactgtacacatcactctt 7528
Score = 44.1 bits (22), Expect = 0.16
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 919 cacagtaaccaagcaactcgacaacattttcatgcttcagccttga 964
|||||||||| | || ||| |||| |||||||||||| ||||||||
Sbjct: 5195 cacagtaacccaacatctccacaagattttcatgctttagccttga 5150
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,302,118
Number of Sequences: 438736
Number of extensions: 1302118
Number of successful extensions: 9966
Number of sequences better than 0.5: 205
Number of HSP's better than 0.5 without gapping: 223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8574
Number of HSP's gapped (non-prelim): 1384
length of query: 1135
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1114
effective length of database: 2,791,206,460
effective search space: 3109403996440
effective search space used: 3109403996440
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)