BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437714.2.1
(1649 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK102267.1| Oryza sativa (japonica cultivar-group) cDNA... 952 0.0
dbj|AK058504.1| Oryza sativa (japonica cultivar-group) cDNA... 912 0.0
gb|CB654210.1|CB654210 OSJNEc06B04.f OSJNEc Oryza sativa (j... 712 0.0
gb|CA755558.1|CA755558 BR030023000_PLATE_E10_77_082.ab1 OA ... 486 e-134
gb|D22444.2|D22444 RICC11129A Rice callus Oryza sativa (jap... 468 e-129
gb|C22460.1|C22460 C22460 Rice callus cDNA Oryza sativa (ja... 438 e-120
emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC O... 381 e-103
ref|NT_107145.1| Oryza sativa (japonica cultivar-group) 381 e-103
gb|AC150775.1| Oryza sativa (japonica cultivar-group) chrom... 381 e-103
gb|AC136969.2| Oryza sativa (japonica cultivar-group) chrom... 381 e-103
gb|AACV01022262.1| Oryza sativa (japonica cultivar-group) c... 381 e-103
gb|AACV01023877.1| Oryza sativa (japonica cultivar-group) c... 381 e-103
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 381 e-103
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 381 e-103
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 381 e-103
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 381 e-103
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 381 e-103
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 381 e-103
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 381 e-103
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 381 e-103
gb|C22423.1|C22423 C22423 Rice callus cDNA Oryza sativa (ja... 329 3e-087
gb|CV733989.1|CV733989 FLO--09-C13.b1 Rice flower lambda ph... 309 3e-081
dbj|AK102976.1| Oryza sativa (japonica cultivar-group) cDNA... 309 3e-081
gb|C22549.1|C22549 C22549 Rice panicle at ripening stage Or... 80 4e-012
dbj|AP003814.1| Oryza sativa (japonica cultivar-group) chro... 80 4e-012
dbj|AK071281.1| Oryza sativa (japonica cultivar-group) cDNA... 80 4e-012
dbj|AP005198.3| Oryza sativa (japonica cultivar-group) geno... 80 4e-012
gb|AACV01016778.1| Oryza sativa (japonica cultivar-group) c... 80 4e-012
ref|XM_479146.1| Oryza sativa (japonica cultivar-group), mRNA 80 4e-012
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 80 4e-012
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 80 4e-012
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 80 4e-012
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 80 4e-012
dbj|AK103037.1| Oryza sativa (japonica cultivar-group) cDNA... 74 3e-010
ref|NM_192557.1| Oryza sativa (japonica cultivar-group), p... 74 3e-010
gb|AU071036.1|AU071036 AU071036 Rice cDNA from young root O... 70 4e-009
dbj|AK066978.1| Oryza sativa (japonica cultivar-group) cDNA... 70 4e-009
gb|AACV01005519.1| Oryza sativa (japonica cultivar-group) c... 70 4e-009
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 70 4e-009
dbj|AP004140.3| Oryza sativa (japonica cultivar-group) geno... 70 4e-009
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 70 4e-009
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 70 4e-009
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 70 4e-009
gb|CB670193.1|CB670193 OSJNEe03C13.r OSJNEe Oryza sativa (j... 68 2e-008
gb|AACV01005116.1| Oryza sativa (japonica cultivar-group) c... 68 2e-008
dbj|AP005055.2| Oryza sativa (japonica cultivar-group) geno... 68 2e-008
dbj|AP004858.3| Oryza sativa (japonica cultivar-group) geno... 68 2e-008
gb|C22548.1|C22548 C22548 Rice panicle at ripening stage Or... 66 7e-008
gb|AU070792.1|AU070792 AU070792 Rice cDNA from young root O... 66 7e-008
dbj|AP005174.1| Oryza sativa (japonica cultivar-group) chro... 66 7e-008
dbj|AP004762.3| Oryza sativa (japonica cultivar-group) geno... 66 7e-008
gb|AACV01018777.1| Oryza sativa (japonica cultivar-group) c... 66 7e-008
ref|XM_483121.1| Oryza sativa (japonica cultivar-group), mRNA 66 7e-008
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 66 7e-008
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 66 7e-008
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 66 7e-008
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 66 7e-008
dbj|AP004796.1| Oryza sativa (japonica cultivar-group) chro... 64 3e-007
dbj|AK108437.1| Oryza sativa (japonica cultivar-group) cDNA... 64 3e-007
dbj|AK109607.1| Oryza sativa (japonica cultivar-group) cDNA... 64 3e-007
dbj|AP004991.3| Oryza sativa (japonica cultivar-group) geno... 64 3e-007
gb|AACV01013237.1| Oryza sativa (japonica cultivar-group) c... 64 3e-007
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 64 3e-007
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 64 3e-007
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 64 3e-007
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 64 3e-007
gb|CB665618.1|CB665618 OSJNEd12C08.r OSJNEd Oryza sativa (j... 62 1e-006
gb|CB669771.1|CB669771 OSJNEe02I03.r OSJNEe Oryza sativa (j... 62 1e-006
dbj|AK066081.1| Oryza sativa (japonica cultivar-group) cDNA... 62 1e-006
dbj|AK066529.1| Oryza sativa (japonica cultivar-group) cDNA... 62 1e-006
dbj|AK071963.1| Oryza sativa (japonica cultivar-group) cDNA... 62 1e-006
dbj|AK107046.1| Oryza sativa (japonica cultivar-group) cDNA... 62 1e-006
dbj|AK110011.1| Oryza sativa (japonica cultivar-group) cDNA... 62 1e-006
emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC O... 62 1e-006
gb|AC125472.2| Oryza sativa (japonica cultivar-group) chrom... 62 1e-006
gb|AC137597.2| Genomic sequence for Oryza sativa, Nipponbar... 62 1e-006
dbj|AP000366.2| Oryza sativa (japonica cultivar-group) geno... 62 1e-006
emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC O... 62 1e-006
ref|NT_107154.1| Oryza sativa (japonica cultivar-group) 62 1e-006
gb|AACV01003541.1| Oryza sativa (japonica cultivar-group) c... 62 1e-006
gb|AACV01006694.1| Oryza sativa (japonica cultivar-group) c... 62 1e-006
gb|AACV01020258.1| Oryza sativa (japonica cultivar-group) c... 62 1e-006
gb|AACV01025609.1| Oryza sativa (japonica cultivar-group) c... 62 1e-006
ref|XM_464445.1| Oryza sativa (japonica cultivar-group), mRNA 62 1e-006
ref|XM_470532.1| Oryza sativa (japonica cultivar-group), p... 62 1e-006
ref|NT_079854.2| Oryza sativa (japonica cultivar-group) 62 1e-006
ref|NT_079911.2| Oryza sativa (japonica cultivar-group) 62 1e-006
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 62 1e-006
ref|NT_107177.1| Oryza sativa (japonica cultivar-group) 62 1e-006
dbj|AP005633.3| Oryza sativa (japonica cultivar-group) geno... 62 1e-006
gb|CH401282.1| Oryza sativa (japonica cultivar-group) chrom... 62 1e-006
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 62 1e-006
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 62 1e-006
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 62 1e-006
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 62 1e-006
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 62 1e-006
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 62 1e-006
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 62 1e-006
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 62 1e-006
gb|CB667205.1|CB667205 OSJNEd14G23.r OSJNEd Oryza sativa (j... 60 4e-006
emb|AL607100.1|OSJN01008 Oryza sativa (japonica cultivar-gr... 60 4e-006
dbj|AP005070.1| Oryza sativa (japonica cultivar-group) chro... 60 4e-006
dbj|AK065614.1| Oryza sativa (japonica cultivar-group) cDNA... 60 4e-006
dbj|AK072348.1| Oryza sativa (japonica cultivar-group) cDNA... 60 4e-006
dbj|AK109138.1| Oryza sativa (japonica cultivar-group) cDNA... 60 4e-006
dbj|AK111596.1| Oryza sativa (japonica cultivar-group) cDNA... 60 4e-006
dbj|AP003962.3| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
dbj|AP004397.3| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic seque... 60 4e-006
gb|AC098693.2| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
dbj|AP006523.2| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
dbj|AP003074.2| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
gb|AACV01000574.1| Oryza sativa (japonica cultivar-group) c... 60 4e-006
gb|AACV01004944.1| Oryza sativa (japonica cultivar-group) c... 60 4e-006
gb|AACV01005807.1| Oryza sativa (japonica cultivar-group) c... 60 4e-006
gb|AACV01018319.1| Oryza sativa (japonica cultivar-group) c... 60 4e-006
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
ref|XM_470172.1| Oryza sativa (japonica cultivar-group), p... 60 4e-006
ref|XM_482082.1| Oryza sativa (japonica cultivar-group), mRNA 60 4e-006
ref|NT_079917.2| Oryza sativa (japonica cultivar-group) 60 4e-006
ref|NM_188775.1| Oryza sativa (japonica cultivar-group), p... 60 4e-006
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 60 4e-006
dbj|AP002865.1| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
gb|AU057426.2|AU057426 AU057426 Oryza sativa mature leaf Ni... 58 2e-005
dbj|AK111671.1| Oryza sativa (japonica cultivar-group) cDNA... 58 2e-005
dbj|AK111826.1| Oryza sativa (japonica cultivar-group) cDNA... 58 2e-005
dbj|AP004309.3| Oryza sativa (japonica cultivar-group) geno... 58 2e-005
dbj|AP004308.3| Oryza sativa (japonica cultivar-group) geno... 58 2e-005
dbj|AP004988.3| Oryza sativa (japonica cultivar-group) geno... 58 2e-005
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 58 2e-005
dbj|AP005457.3| Oryza sativa (japonica cultivar-group) geno... 58 2e-005
gb|AACV01005981.1| Oryza sativa (japonica cultivar-group) c... 58 2e-005
gb|AACV01014842.1| Oryza sativa (japonica cultivar-group) c... 58 2e-005
gb|AACV01016802.1| Oryza sativa (japonica cultivar-group) c... 58 2e-005
ref|NM_189831.1| Oryza sativa (japonica cultivar-group), mRNA 58 2e-005
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 58 2e-005
gb|AQ858339.1|AQ858339 nbeb0012O12r CUGI Rice BAC Library (... 56 6e-005
gb|AZ130558.1|AZ130558 OSJNBb0104B19r CUGI Rice BAC Library... 56 6e-005
gb|AU056526.1|AU056526 AU056526 Oryza sativa mature leaf Ni... 56 6e-005
gb|CF589223.1|CF589223 EST00F03 Subtracted cDNA library of ... 56 6e-005
dbj|AK065635.1| Oryza sativa (japonica cultivar-group) cDNA... 56 6e-005
dbj|AK105669.1| Oryza sativa (japonica cultivar-group) cDNA... 56 6e-005
dbj|AK106421.1| Oryza sativa (japonica cultivar-group) cDNA... 56 6e-005
dbj|AK110293.1| Oryza sativa (japonica cultivar-group) cDNA... 56 6e-005
dbj|AK111558.1| Oryza sativa (japonica cultivar-group) cDNA... 56 6e-005
gb|AC099401.2| Oryza sativa (japonica cultivar-group) chrom... 56 6e-005
gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 ... 56 6e-005
emb|AL731756.4|CNS08C85 Oryza sativa chromosome 12, . BAC O... 56 6e-005
dbj|AP003818.2| Oryza sativa (japonica cultivar-group) geno... 56 6e-005
dbj|AP003813.4| Oryza sativa (japonica cultivar-group) geno... 56 6e-005
ref|NT_107144.1| Oryza sativa (japonica cultivar-group) 56 6e-005
ref|NT_107146.1| Oryza sativa (japonica cultivar-group) 56 6e-005
gb|AACV01005907.1| Oryza sativa (japonica cultivar-group) c... 56 6e-005
gb|AACV01008110.1| Oryza sativa (japonica cultivar-group) c... 56 6e-005
gb|AACV01014841.1| Oryza sativa (japonica cultivar-group) c... 56 6e-005
gb|AACV01017045.1| Oryza sativa (japonica cultivar-group) c... 56 6e-005
gb|AACV01022658.1| Oryza sativa (japonica cultivar-group) c... 56 6e-005
ref|XM_469978.1| Oryza sativa (japonica cultivar-group), mRNA 56 6e-005
ref|XM_470265.1| Oryza sativa (japonica cultivar-group), p... 56 6e-005
ref|XM_479597.1| Oryza sativa (japonica cultivar-group), mRNA 56 6e-005
ref|NT_107187.1| Oryza sativa (japonica cultivar-group) 56 6e-005
gb|CH401260.1| Oryza sativa (japonica cultivar-group) chrom... 56 6e-005
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 56 6e-005
gb|AC136971.3| Oryza sativa (japonica cultivar-group) chrom... 56 6e-005
gb|AQ161274.1|AQ161274 nbxb0006L07f CUGI Rice BAC Library O... 54 2e-004
gb|CB647139.1|CB647139 OSJNEb09P01.r OSJNEb Oryza sativa (j... 54 2e-004
gb|CB654413.1|CB654413 OSJNEc06N04.f OSJNEc Oryza sativa (j... 54 2e-004
gb|CB654414.1|CB654414 OSJNEc06N04.r OSJNEc Oryza sativa (j... 54 2e-004
gb|CB655494.1|CB655494 OSJNEc08P18.f OSJNEc Oryza sativa (j... 54 2e-004
gb|CB661965.1|CB661965 OSJNEd05I05.r OSJNEd Oryza sativa (j... 54 2e-004
gb|CB662172.1|CB662172 OSJNEd05P02.r OSJNEd Oryza sativa (j... 54 2e-004
gb|CB668515.1|CB668515 OSJNEd16G12.r OSJNEd Oryza sativa (j... 54 2e-004
gb|CB668618.1|CB668618 OSJNEd16J01.r OSJNEd Oryza sativa (j... 54 2e-004
gb|CB677739.1|CB677739 OSJNEe15A20.f OSJNEe Oryza sativa (j... 54 2e-004
gb|CF326454.1|CF326454 JMT1--06-B18.g1 AtJMT-overexpressing... 54 2e-004
gb|CV724173.1|CV724173 root--06-B13.g1 Rice root lambda pha... 54 2e-004
gb|CV724230.1|CV724230 root--06-E13.g1 Rice root lambda pha... 54 2e-004
dbj|AP004061.1| Oryza sativa (japonica cultivar-group) chro... 54 2e-004
dbj|AK061840.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
dbj|AK068774.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
dbj|AK069727.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
dbj|AK099755.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
dbj|AK101172.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
dbj|AK103263.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
dbj|AK109788.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
dbj|AK111638.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
emb|AL954853.5|CNS08CD7 Oryza sativa chromosome 12, . BAC O... 54 2e-004
dbj|AP005474.3| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
dbj|AP005647.3| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
emb|AL606452.2|OSJN00007 Oryza sativa genomic DNA, chromoso... 54 2e-004
dbj|AP004043.3| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
ref|NT_107159.1| Oryza sativa (japonica cultivar-group) 54 2e-004
ref|NT_107234.1| Oryza sativa (japonica cultivar-group) 54 2e-004
dbj|AP003761.3| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|AACV01003186.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01003299.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01005681.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01009831.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01009832.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01013012.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01014891.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01024191.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01024192.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01024276.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
dbj|AP000399.1| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
ref|XM_463824.1| Oryza sativa (japonica cultivar-group), mRNA 54 2e-004
ref|XM_463825.1| Oryza sativa (japonica cultivar-group), mRNA 54 2e-004
ref|XM_463826.1| Oryza sativa (japonica cultivar-group), mRNA 54 2e-004
ref|XM_464057.1| Oryza sativa (japonica cultivar-group), mRNA 54 2e-004
ref|XM_468538.1| Oryza sativa (japonica cultivar-group), mRNA 54 2e-004
ref|XM_472608.1| Oryza sativa (japonica cultivar-group), p... 54 2e-004
ref|NT_079861.2| Oryza sativa (japonica cultivar-group) 54 2e-004
ref|NT_107182.1| Oryza sativa (japonica cultivar-group) 54 2e-004
dbj|AP004752.3| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
dbj|AP003621.3| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
ref|XM_550622.1| Oryza sativa (japonica cultivar-group), mRNA 54 2e-004
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 54 2e-004
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 54 2e-004
gb|CH401273.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|C22424.1|C22424 C22424 Rice callus cDNA Oryza sativa (ja... 52 0.001
gb|AC087595.1|AC087595 Oryza sativa (japonica cultivar-grou... 52 0.001
dbj|AB103395.1| Oryza sativa (japonica cultivar-group) MSP1... 52 0.001
dbj|AK120933.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.001
gb|AACV01002925.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
gb|AACV01014884.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
ref|NM_189954.1| Oryza sativa (japonica cultivar-group), p... 52 0.001
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 52 0.001
dbj|AP003451.4| Oryza sativa (japonica cultivar-group) geno... 52 0.001
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 52 0.001
gb|AQ159227.1|AQ159227 nbxb0013M15f CUGI Rice BAC Library O... 50 0.004
gb|AZ046436.1|AZ046436 nbeb0088L24r CUGI Rice BAC Library (... 50 0.004
gb|AU082462.1|AU082462 AU082462 Rice callus Oryza sativa (j... 50 0.004
gb|CB668018.1|CB668018 OSJNEd15K10.r OSJNEd Oryza sativa (j... 50 0.004
gb|CB668062.1|CB668062 OSJNEd15L11.r OSJNEd Oryza sativa (j... 50 0.004
gb|CF303843.1|CF303843 ABF1--03-F22.g1 ABF3-overexpressing ... 50 0.004
gb|CF304334.1|CF304334 ABF1--04-L03.g1 ABF3-overexpressing ... 50 0.004
dbj|AP004099.1| Oryza sativa (japonica cultivar-group) chro... 50 0.004
dbj|AP004631.1| Oryza sativa (japonica cultivar-group) chro... 50 0.004
gb|AY224427.1| Oryza sativa (japonica cultivar-group) isola... 50 0.004
dbj|AK064161.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
dbj|AK066381.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
dbj|AK066397.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
dbj|AK070847.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
dbj|AK100606.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
dbj|AK102164.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
dbj|AK104902.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
dbj|AK108649.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
dbj|AK109954.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
dbj|AK110462.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
dbj|AK111823.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.004
emb|AL732378.3|CNS08C91 Oryza sativa chromosome 12, . BAC O... 50 0.004
emb|BX664710.2|CNS09SC0 Oryza sativa chromosome 12, . PAC P... 50 0.004
dbj|AP004584.3| Oryza sativa (japonica cultivar-group) geno... 50 0.004
dbj|AP005394.3| Oryza sativa (japonica cultivar-group) geno... 50 0.004
ref|NT_107086.1| Oryza sativa chromosome 12, . PAC P0243A04... 50 0.004
dbj|AP003609.2| Oryza sativa (japonica cultivar-group) geno... 50 0.004
dbj|AP003539.3| Oryza sativa (japonica cultivar-group) geno... 50 0.004
dbj|AP007224.2| Oryza sativa (japonica cultivar-group) geno... 50 0.004
dbj|AP003770.3| Oryza sativa (japonica cultivar-group) geno... 50 0.004
gb|AACV01002138.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01003374.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01003662.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01009793.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01010208.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01014572.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01017114.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01018313.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01019678.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01025630.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
ref|NM_185169.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.004
ref|NM_192128.1| Oryza sativa (japonica cultivar-group), p... 50 0.004
ref|XM_473357.1| Oryza sativa (japonica cultivar-group), p... 50 0.004
ref|XM_473511.1| Oryza sativa (japonica cultivar-group), p... 50 0.004
ref|XM_477081.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.004
ref|XM_479726.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.004
ref|XM_482068.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.004
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 50 0.004
ref|NT_107081.1| Oryza sativa (japonica cultivar-group) 50 0.004
dbj|AP005091.3| Oryza sativa (japonica cultivar-group) geno... 50 0.004
dbj|AP003943.3| Oryza sativa (japonica cultivar-group) geno... 50 0.004
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 50 0.004
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 50 0.004
dbj|AP003455.2| Oryza sativa (japonica cultivar-group) geno... 50 0.004
dbj|AP003450.3| Oryza sativa (japonica cultivar-group) geno... 50 0.004
gb|CH401241.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
emb|AL606587.3|OSJN00022 Oryza sativa genomic DNA, chromoso... 50 0.004
emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromoso... 50 0.004
emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC... 50 0.004
gb|C22350.1|C22350 C22350 Rice callus cDNA Oryza sativa (ja... 48 0.015
gb|AY224423.1| Oryza sativa (japonica cultivar-group) isola... 48 0.015
dbj|AK111267.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.015
gb|AC123524.2| Oryza sativa (japonica cultivar-group) chrom... 48 0.015
dbj|AP004839.3| Oryza sativa (japonica cultivar-group) geno... 48 0.015
dbj|AP004868.3| Oryza sativa (japonica cultivar-group) geno... 48 0.015
gb|AACV01005029.1| Oryza sativa (japonica cultivar-group) c... 48 0.015
gb|AACV01020444.1| Oryza sativa (japonica cultivar-group) c... 48 0.015
gb|AACV01022625.1| Oryza sativa (japonica cultivar-group) c... 48 0.015
gb|AACV01022660.1| Oryza sativa (japonica cultivar-group) c... 48 0.015
ref|XM_467048.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.015
dbj|AP005314.2| Oryza sativa (japonica cultivar-group) geno... 48 0.015
dbj|AP005567.3| Oryza sativa (japonica cultivar-group) geno... 48 0.015
ref|NT_107077.1| Oryza sativa (japonica cultivar-group) 48 0.015
gb|CH401258.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.015
gb|AZ130710.1|AZ130710 OSJNBb0062D17f CUGI Rice BAC Library... 46 0.061
gb|C26711.1|C26711 C26711 Rice callus cDNA Oryza sativa (ja... 46 0.061
gb|C28427.1|C28427 C28427 Rice callus cDNA Oryza sativa (ja... 46 0.061
gb|C22582.1|C22582 C22582 Rice root Oryza sativa (japonica ... 46 0.061
gb|D23623.1|D23623 RICC3112A Rice callus Oryza sativa (japo... 46 0.061
gb|AU222681.1|AU222681 AU222681 Rice green shoot Oryza sati... 46 0.061
gb|CA998892.1|CA998892 S345N_C10 Rice cold stress germinati... 46 0.061
gb|CB644108.1|CB644108 OSJNEb05C18.r OSJNEb Oryza sativa (j... 46 0.061
gb|CB646653.1|CB646653 OSJNEb09D24.f OSJNEb Oryza sativa (j... 46 0.061
gb|CB647821.1|CB647821 OSJNEb10O20.r OSJNEb Oryza sativa (j... 46 0.061
gb|CB647854.1|CB647854 OSJNEb10P13.r OSJNEb Oryza sativa (j... 46 0.061
gb|CB657858.1|CB657858 OSJNEc13H23.r OSJNEc Oryza sativa (j... 46 0.061
gb|CB657935.1|CB657935 OSJNEc13J23.r OSJNEc Oryza sativa (j... 46 0.061
gb|CB658007.1|CB658007 OSJNEc13L21.f OSJNEc Oryza sativa (j... 46 0.061
gb|CB659293.1|CB659293 OSJNEc16C07.r OSJNEc Oryza sativa (j... 46 0.061
gb|CB659329.1|CB659329 OSJNEc16D07.r OSJNEc Oryza sativa (j... 46 0.061
gb|CB659700.1|CB659700 OSJNEc16O11.r OSJNEc Oryza sativa (j... 46 0.061
gb|CB668413.1|CB668413 OSJNEd16E03.r OSJNEd Oryza sativa (j... 46 0.061
gb|CB670817.1|CB670817 OSJNEe04B13.r OSJNEe Oryza sativa (j... 46 0.061
gb|CB679510.1|CB679510 OSJNEf03B18.f OSJNEf Oryza sativa (j... 46 0.061
gb|CB679511.1|CB679511 OSJNEf03B18.r OSJNEf Oryza sativa (j... 46 0.061
gb|CX728014.1|CX728014 OSJNEc13L21.r OSJNEc Oryza sativa (j... 46 0.061
dbj|AP003926.1| Oryza sativa (japonica cultivar-group) chro... 46 0.061
dbj|AP004088.1| Oryza sativa (japonica cultivar-group) chro... 46 0.061
dbj|AK068992.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.061
dbj|AK072170.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.061
dbj|AK072305.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.061
dbj|AK100479.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.061
dbj|AK102905.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.061
dbj|AK103473.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.061
dbj|AK105683.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.061
dbj|AK106265.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.061
dbj|AK119823.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.061
dbj|AK120857.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.061
dbj|AP003898.3| Oryza sativa (japonica cultivar-group) geno... 46 0.061
dbj|AP005734.4| Oryza sativa (japonica cultivar-group) geno... 46 0.061
gb|AC087545.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.061
gb|AC109594.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.061
gb|AC109365.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.061
dbj|AP004163.3| Oryza sativa (japonica cultivar-group) geno... 46 0.061
gb|AC093952.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.061
dbj|AP005321.2| Oryza sativa (japonica cultivar-group) geno... 46 0.061
dbj|AP005421.3| Oryza sativa (japonica cultivar-group) geno... 46 0.061
ref|NT_107132.1| Oryza sativa (japonica cultivar-group) 46 0.061
dbj|AP004862.3| Oryza sativa (japonica cultivar-group) geno... 46 0.061
dbj|AP005412.3| Oryza sativa (japonica cultivar-group) geno... 46 0.061
gb|AC087553.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.061
dbj|AP003250.3| Oryza sativa (japonica cultivar-group) geno... 46 0.061
gb|AACV01000149.1| Oryza sativa (japonica cultivar-group) c... 46 0.061
gb|AACV01003369.1| Oryza sativa (japonica cultivar-group) c... 46 0.061
gb|AACV01009922.1| Oryza sativa (japonica cultivar-group) c... 46 0.061
gb|AACV01009963.1| Oryza sativa (japonica cultivar-group) c... 46 0.061
gb|AACV01010973.1| Oryza sativa (japonica cultivar-group) c... 46 0.061
gb|AACV01012445.1| Oryza sativa (japonica cultivar-group) c... 46 0.061
gb|AACV01013178.1| Oryza sativa (japonica cultivar-group) c... 46 0.061
gb|AACV01018500.1| Oryza sativa (japonica cultivar-group) c... 46 0.061
gb|AACV01018958.1| Oryza sativa (japonica cultivar-group) c... 46 0.061
gb|AACV01019921.1| Oryza sativa (japonica cultivar-group) c... 46 0.061
gb|AACV01021613.1| Oryza sativa (japonica cultivar-group) c... 46 0.061
gb|AACV01023504.1| Oryza sativa (japonica cultivar-group) c... 46 0.061
ref|NM_196634.1| Oryza sativa (japonica cultivar-group) put... 46 0.061
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 46 0.061
ref|XM_462744.1| Oryza sativa (japonica cultivar-group), p... 46 0.061
ref|XM_472767.1| Oryza sativa (japonica cultivar-group), p... 46 0.061
ref|XM_472838.1| Oryza sativa (japonica cultivar-group), p... 46 0.061
ref|XM_475450.1| Oryza sativa (japonica cultivar-group), p... 46 0.061
ref|XM_476051.1| Oryza sativa (japonica cultivar-group), p... 46 0.061
ref|XM_478590.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.061
ref|XM_482490.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.061
ref|NT_079863.2| Oryza sativa (japonica cultivar-group) 46 0.061
ref|NT_107083.1| Oryza sativa (japonica cultivar-group) 46 0.061
ref|NT_107214.1| Oryza sativa (japonica cultivar-group) 46 0.061
ref|NT_107223.1| Oryza sativa (japonica cultivar-group) 46 0.061
dbj|AP003489.2| Oryza sativa (japonica cultivar-group) geno... 46 0.061
ref|XM_550056.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.061
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.061
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.061
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.061
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.061
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.061
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.061
emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromoso... 46 0.061
emb|BX842605.1|OSJN00299 Oryza sativa genomic DNA, chromoso... 46 0.061
gb|AC084817.5| Oryza sativa (japonica cultivar-group) chrom... 46 0.061
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 46 0.061
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 46 0.061
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.061
gb|AQ289403.1|AQ289403 nbxb0035C17r CUGI Rice BAC Library O... 44 0.24
gb|AQ688058.1|AQ688058 nbxb0076L04f CUGI Rice BAC Library O... 44 0.24
gb|AZ045838.1|AZ045838 nbeb0087F23f CUGI Rice BAC Library (... 44 0.24
gb|AZ129088.1|AZ129088 OSJNBb0098B15f CUGI Rice BAC Library... 44 0.24
dbj|AB157787.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.24
dbj|AB157792.1| Oryza sativa (japonica cultivar-group) DNA,... 44 0.24
gb|CZ555435.1|CZ555435 M0027563 AS_TRIM_TDNA_B1 Oryza sativ... 44 0.24
gb|C22647.1|C22647 C22647 Rice green shoot Oryza sativa (ja... 44 0.24
gb|AU174251.1|AU174251 AU174251 Rice shoot Oryza sativa (ja... 44 0.24
gb|CB638317.1|CB638317 OSJNEa06H15.r OSJNEa Oryza sativa (j... 44 0.24
gb|CB646784.1|CB646784 OSJNEb09G23.r OSJNEb Oryza sativa (j... 44 0.24
gb|CB648750.1|CB648750 OSJNEb12E19.r OSJNEb Oryza sativa (j... 44 0.24
gb|CB653093.1|CB653093 OSJNEc03M18.r OSJNEc Oryza sativa (j... 44 0.24
gb|CB655164.1|CB655164 OSJNEc08E20.r OSJNEc Oryza sativa (j... 44 0.24
gb|CB656660.1|CB656660 OSJNEc11E06.r OSJNEc Oryza sativa (j... 44 0.24
gb|CB657216.1|CB657216 OSJNEc12F24.r OSJNEc Oryza sativa (j... 44 0.24
gb|CB666875.1|CB666875 OSJNEd13P08.r OSJNEd Oryza sativa (j... 44 0.24
gb|CB671190.1|CB671190 OSJNEe04K07.r OSJNEe Oryza sativa (j... 44 0.24
gb|CF317113.1|CF317113 HD--06-K24.b1 OsHDAC1-overexpressing... 44 0.24
gb|CF323683.1|CF323683 HDN--04-H23.g1 OsHDAC1-overexpressin... 44 0.24
gb|CF328269.1|CF328269 NACL--03-B14.b1 Rice callus plasmid ... 44 0.24
gb|CV728405.1|CV728405 COLD--01-E02.b1 Cold treated rice le... 44 0.24
dbj|AP004575.1| Oryza sativa (japonica cultivar-group) chro... 44 0.24
dbj|AK065898.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.24
dbj|AK100827.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.24
dbj|AK102474.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.24
dbj|AK109631.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.24
dbj|AK111926.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.24
emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC O... 44 0.24
emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC O... 44 0.24
emb|AL732377.4|CNS08C90 Oryza sativa chromosome 12, . BAC O... 44 0.24
gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F2... 44 0.24
gb|AC092548.10| Oryza sativa chromosome 10 BAC OSJNBa0073L0... 44 0.24
gb|AC092553.4| Oryza sativa (japonica cultivar-group) chrom... 44 0.24
gb|AC122147.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.24
gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 ... 44 0.24
gb|AC135206.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.24
gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 gen... 44 0.24
gb|AC145127.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.24
gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 ... 44 0.24
gb|AC119289.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.24
emb|AL732379.5|CNS08C92 Oryza sativa chromosome 3, . BAC OS... 44 0.24
dbj|AP005786.2| Oryza sativa (japonica cultivar-group) geno... 44 0.24
dbj|AP003736.3| Oryza sativa (japonica cultivar-group) geno... 44 0.24
ref|NT_079837.2| Oryza sativa (japonica cultivar-group) 44 0.24
ref|NT_107107.1| Oryza sativa chromosome 3, . BAC OSJNBa002... 44 0.24
ref|NT_107152.1| Oryza sativa (japonica cultivar-group) 44 0.24
dbj|AP004792.3| Oryza sativa (japonica cultivar-group) geno... 44 0.24
gb|AC118285.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.24
gb|AC098833.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.24
gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 ... 44 0.24
gb|AACV01000473.1| Oryza sativa (japonica cultivar-group) c... 44 0.24
gb|AACV01001703.1| Oryza sativa (japonica cultivar-group) c... 44 0.24
gb|AACV01006269.1| Oryza sativa (japonica cultivar-group) c... 44 0.24
gb|AACV01007448.1| Oryza sativa (japonica cultivar-group) c... 44 0.24
gb|AACV01007452.1| Oryza sativa (japonica cultivar-group) c... 44 0.24
gb|AACV01007932.1| Oryza sativa (japonica cultivar-group) c... 44 0.24
gb|AACV01008182.1| Oryza sativa (japonica cultivar-group) c... 44 0.24
gb|AACV01010090.1| Oryza sativa (japonica cultivar-group) c... 44 0.24
gb|AACV01011736.1| Oryza sativa (japonica cultivar-group) c... 44 0.24
gb|AACV01012002.1| Oryza sativa (japonica cultivar-group) c... 44 0.24
gb|AACV01012646.1| Oryza sativa (japonica cultivar-group) c... 44 0.24
gb|AACV01014623.1| Oryza sativa (japonica cultivar-group) c... 44 0.24
gb|AACV01016491.1| Oryza sativa (japonica cultivar-group) c... 44 0.24
gb|AACV01020749.1| Oryza sativa (japonica cultivar-group) c... 44 0.24
gb|AACV01021334.1| Oryza sativa (japonica cultivar-group) c... 44 0.24
gb|AACV01021937.1| Oryza sativa (japonica cultivar-group) c... 44 0.24
gb|AACV01025099.1| Oryza sativa (japonica cultivar-group) c... 44 0.24
gb|AC134344.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.24
ref|NM_194712.1| Oryza sativa (japonica cultivar-group) con... 44 0.24
ref|NM_197350.1| Oryza sativa (japonica cultivar-group) put... 44 0.24
ref|NT_080060.1| Oryza sativa (japonica cultivar-group) chr... 44 0.24
ref|NT_080065.1| Oryza sativa (japonica cultivar-group) chr... 44 0.24
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 44 0.24
ref|XM_473126.1| Oryza sativa (japonica cultivar-group), p... 44 0.24
ref|XM_475142.1| Oryza sativa (japonica cultivar-group), p... 44 0.24
ref|NT_079864.2| Oryza sativa (japonica cultivar-group) 44 0.24
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 44 0.24
ref|NT_107186.1| Oryza sativa (japonica cultivar-group) 44 0.24
ref|NT_107188.1| Oryza sativa (japonica cultivar-group) 44 0.24
ref|NT_107191.1| Oryza sativa (japonica cultivar-group) 44 0.24
ref|NT_107206.1| Oryza sativa (japonica cultivar-group) 44 0.24
ref|NT_107210.1| Oryza sativa (japonica cultivar-group) 44 0.24
ref|NT_107219.1| Oryza sativa (japonica cultivar-group) 44 0.24
ref|NM_188505.1| Oryza sativa (japonica cultivar-group), Oz... 44 0.24
dbj|AP002094.1| Oryza sativa (japonica cultivar-group) geno... 44 0.24
dbj|AP003300.4| Oryza sativa (japonica cultivar-group) geno... 44 0.24
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.24
gb|CH401253.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.24
gb|CH401243.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.24
gb|CH401204.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.24
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.24
emb|AL606607.3|OSJN00068 Oryza sativa genomic DNA, chromoso... 44 0.24
emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromoso... 44 0.24
gb|AF377947.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.24
>dbj|AK102267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088N21, full
insert sequence
Length = 1835
Score = 952 bits (480), Expect = 0.0
Identities = 849/972 (87%)
Strand = Plus / Minus
Query: 595 gtctcgacgacgtcgctcatgagcggcctggcctttgggttctggctcaggcagtagaac 654
||||| |||||||||||||| || ||||| ||||||||||| ||||||| ||||||| |
Sbjct: 1354 gtctcaacgacgtcgctcataagaggcctcgcctttgggttttggctcaagcagtagtat 1295
Query: 655 gcgaggctgcaggacttgtgagcggctctggccgagtactgcccctccagcctcgggtcg 714
|| |||||||||| ||||| || ||||| | || ||||| |||||||| | |||||
Sbjct: 1294 gctaggctgcaggctttgtgggcagctctaactgaatactgtccctccagttttgggtca 1235
Query: 715 atgatctggaggagcctcctcttgtcgttgagcttcgggagcgcccagtccaccaggctc 774
||||| ||||| ||||||||||||||||| ||||||||||| |||||||| |||| |||
Sbjct: 1234 atgatttggagaagcctcctcttgtcgttcagcttcgggagggcccagtcaaccaagcta 1175
Query: 775 tgctccctgctgggccgcgacttgtcgatcgacttgcgccccgtcaggagctccagcagg 834
||||||||||||||||| ||||||||||| ||||| ||||| |||| ||| || || |||
Sbjct: 1174 tgctccctgctgggccgtgacttgtcgatggacttacgcccagtcaagagttcaagaagg 1115
Query: 835 accacgccgaagctgtacacgtcactccgagcagtcaagtgaccggtcatcacatattca 894
|| || || |||||||| || ||||| | ||||||||||||||| |||||||||||||||
Sbjct: 1114 acaacaccaaagctgtagacatcacttctagcagtcaagtgaccagtcatcacatattca 1055
Query: 895 ggggcagcataaccgtaggttcccatcacccgtgtcgacacatgcgtctgatcaccttca 954
|||||||||||||| || |||||||||||||| || || ||||| || ||||| |||||
Sbjct: 1054 ggggcagcataaccatatgttcccatcacccgagttgatacatgggtttgatcgccttct 995
Query: 955 gggccatcttttgcgaggccaaagtcagacagtttggcagtataatcggagtccagcaga 1014
|||||| ||||||| || ||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct: 994 gggccagcttttgccagaccaaagtcagagagtttagcagtataatctgagtccagcaga 935
Query: 1015 atgtttgatgtcttgaaatctctgtagatgacgggcctttgagcgttgtggaggcaagcg 1074
|| ||||||||||||||||| |||||||| | ||||||| ||| ||||||||||||||
Sbjct: 934 atatttgatgtcttgaaatccctgtagataattggcctttcagcattgtggaggcaagct 875
Query: 1075 agccctttagcggctcccagcgcgattgacatcctagtaccccagggcaatggcgtagct 1134
| |||||| || ||||| | || || |||||||||||| |||| | | ||| ||||||
Sbjct: 874 aaccctttggcagctcctaatgcaatcgacatcctagtagcccacgatagtggagtagct 815
Query: 1135 gtctttcggaataagtggttttctagacttcctcgaaacatgaactcgtagacaagcagc 1194
||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 814 gtccttcggaataagtggttttctagacttcctcgaaacatgaactcgtacacaagcagc 755
Query: 1195 cgatggtcatcttcgcagcaatatccgatcaacttcaccaaatttggatgcctcaactgc 1254
| |||||||||||||||||||| || |||||||| || ||||||||||| || | ||||
Sbjct: 754 ctgtggtcatcttcgcagcaatacccaatcaacttgactaaatttggatgtcttagctgc 695
Query: 1255 cccaggcagttaacctcggtaagccattctctgtgcccttgatgtccatctttgttgagc 1314
|| ||| | ||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 694 ccaaggaacctaacctcagtaagccattctctgtgtccttgatgtccatctttgttgagc 635
Query: 1315 accttgactgcaacaggcagtgacttcagcccaaccctgacattttcatctatgtaaccc 1374
||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||
Sbjct: 634 accttgactgcaacaggtagtgacttcagaccaaccctgacattctcatctatgtagccc 575
Query: 1375 ttgtaaacggtcccaaatcctccttcgccaagaacataatcaacacggaagctctttgtg 1434
|||||||| |||||||| |||||||| |||||||| || ||| ||||||||||| |||||
Sbjct: 574 ttgtaaacagtcccaaaccctccttcaccaagaacgtagtcagcacggaagctccttgtg 515
Query: 1435 attgtctctagctcaaacaatgtgaaggcaatcacatcgttgtatatggaaatgttcttg 1494
|| ||||| || ||||||||||||||| |||||||||| ||||||||||| |||||||||
Sbjct: 514 atagtctcgagttcaaacaatgtgaagtcaatcacatcattgtatatggagatgttcttg 455
Query: 1495 gcatcttcaactttcctaggtgtggaagggtcacttatatctgatgacatgcaggtgtgc 1554
|||||||||| |||||||||||| ||||| ||||| ||||||||||| |||| |||||||
Sbjct: 454 gcatcttcaattttcctaggtgttgaaggatcactcatatctgatgagatgcgggtgtgc 395
Query: 1555 ttcctatctgca 1566
||||| ||||||
Sbjct: 394 ttcctctctgca 383
Score = 48.1 bits (24), Expect = 0.015
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 229 ctcttagttcagccttccatttcttgggttaa 260
|||||||||||||||| ||||||| |||||||
Sbjct: 1812 ctcttagttcagcctttcatttctggggttaa 1781
>dbj|AK058504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F09, full
insert sequence
Length = 1428
Score = 912 bits (460), Expect = 0.0
Identities = 829/952 (87%)
Strand = Plus / Minus
Query: 595 gtctcgacgacgtcgctcatgagcggcctggcctttgggttctggctcaggcagtagaac 654
||||| |||||||||||||| || ||||| ||||||||||| ||||||| ||||||| |
Sbjct: 956 gtctcaacgacgtcgctcataagaggcctcgcctttgggttttggctcaagcagtagtat 897
Query: 655 gcgaggctgcaggacttgtgagcggctctggccgagtactgcccctccagcctcgggtcg 714
|| |||||||||| ||||| || ||||| | || ||||| |||||||| | |||||
Sbjct: 896 gctaggctgcaggctttgtgggcagctctaactgaatactgtccctccagttttgggtca 837
Query: 715 atgatctggaggagcctcctcttgtcgttgagcttcgggagcgcccagtccaccaggctc 774
||||| ||||| ||||||||||||||||| || ||| |||| |||||||| |||| |||
Sbjct: 836 atgatttggagaagcctcctcttgtcgttcagtttcaggagggcccagtcaaccaagctg 777
Query: 775 tgctccctgctgggccgcgacttgtcgatcgacttgcgccccgtcaggagctccagcagg 834
|||||||| |||||||| ||||||||||| ||||| ||||| |||| ||| || || |||
Sbjct: 776 tgctccctactgggccgtgacttgtcgatggacttacgcccagtcaagagttcaagaagg 717
Query: 835 accacgccgaagctgtacacgtcactccgagcagtcaagtgaccggtcatcacatattca 894
|| || || |||||||| || ||||| | ||||||||||||||| |||||||| ||||||
Sbjct: 716 acaacaccaaagctgtagacatcacttctagcagtcaagtgaccagtcatcacgtattca 657
Query: 895 ggggcagcataaccgtaggttcccatcacccgtgtcgacacatgcgtctgatcaccttca 954
|||||||||||||| || ||||||||||||||||| || ||||| || ||||| |||||
Sbjct: 656 ggggcagcataaccatatgttcccatcacccgtgttgatacatgggtttgatcgccttct 597
Query: 955 gggccatcttttgcgaggccaaagtcagacagtttggcagtataatcggagtccagcaga 1014
|||||| ||||||| || ||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct: 596 gggccagcttttgccagaccaaagtcagagagtttagcagtataatctgagtccagcaga 537
Query: 1015 atgtttgatgtcttgaaatctctgtagatgacgggcctttgagcgttgtggaggcaagcg 1074
|| ||||||||||||||||| |||||||| | ||||||| ||| ||||||||||||||
Sbjct: 536 atatttgatgtcttgaaatccctgtagataattggcctttcagcattgtggaggcaagct 477
Query: 1075 agccctttagcggctcccagcgcgattgacatcctagtaccccagggcaatggcgtagct 1134
| |||||| || || || | || || |||||||||||| |||||| | ||| ||||||
Sbjct: 476 aaccctttggcagcccctaatgcaatcgacatcctagtagcccaggatagtggagtagct 417
Query: 1135 gtctttcggaataagtggttttctagacttcctcgaaacatgaactcgtagacaagcagc 1194
||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 416 gtccttcggaataagtggttttctagacttcctcgaaacatgaactcgtacacaagcagc 357
Query: 1195 cgatggtcatcttcgcagcaatatccgatcaacttcaccaaatttggatgcctcaactgc 1254
| |||||||||||||||||||| || |||||||| || ||||||||||| || | ||||
Sbjct: 356 ctgtggtcatcttcgcagcaatacccaatcaacttgactaaatttggatgtcttagctgc 297
Query: 1255 cccaggcagttaacctcggtaagccattctctgtgcccttgatgtccatctttgttgagc 1314
|| ||| | ||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 296 ccaaggaacctaacctcagtaagccattctctgtgtccttgatgtccatctttgttgagc 237
Query: 1315 accttgactgcaacaggcagtgacttcagcccaaccctgacattttcatctatgtaaccc 1374
||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||
Sbjct: 236 accttgactgcaacaggtagtgacttcagaccaaccctgacattctcatctatgtagccc 177
Query: 1375 ttgtaaacggtcccaaatcctccttcgccaagaacataatcaacacggaagctctttgtg 1434
|||||||| |||||||| |||||||| |||||||| || ||| |||||||||||||||||
Sbjct: 176 ttgtaaacagtcccaaaccctccttcaccaagaacgtagtcagcacggaagctctttgtg 117
Query: 1435 attgtctctagctcaaacaatgtgaaggcaatcacatcgttgtatatggaaatgttcttg 1494
|| ||||| || |||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 116 atggtctcgagttcaaacaatgtgaaatcaatcacatcgttgtatatggagatgttcttg 57
Query: 1495 gcatcttcaactttcctaggtgtggaagggtcacttatatctgatgacatgc 1546
|||||||||| |||||||||||| ||||| ||||| ||||||||||| ||||
Sbjct: 56 gcatcttcaattttcctaggtgttgaaggatcactcatatctgatgagatgc 5
Score = 58.0 bits (29), Expect = 2e-005
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 220 atccaaccgctcttagttcagccttccatttcttgggttaa 260
|||||||| |||||||||||||||| ||||||| |||||||
Sbjct: 1416 atccaaccactcttagttcagcctttcatttctggggttaa 1376
>gb|CB654210.1|CB654210 OSJNEc06B04.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc06B04 5', mRNA sequence
Length = 740
Score = 712 bits (359), Expect = 0.0
Identities = 605/687 (88%)
Strand = Plus / Minus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccatcacccgtgtcgacacatgc 939
|||||||| |||||||||||||||||||| || ||||||||||||||||| || |||||
Sbjct: 740 gtcatcacgtattcaggggcagcataaccatatgttcccatcacccgtgttgatacatgg 681
Query: 940 gtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagtttggcagtataa 999
|| ||||| ||||| |||||| ||||||| || ||||||||||| ||||| |||||||||
Sbjct: 680 gtttgatcgccttctgggccagcttttgccagaccaaagtcagagagtttagcagtataa 621
Query: 1000 tcggagtccagcagaatgtttgatgtcttgaaatctctgtagatgacgggcctttgagcg 1059
|| |||||||||||||| ||||||||||||||||| |||||||| | ||||||| |||
Sbjct: 620 tctgagtccagcagaatatttgatgtcttgaaatccctgtagataattggcctttcagca 561
Query: 1060 ttgtggaggcaagcgagccctttagcggctcccagcgcgattgacatcctagtaccccag 1119
|||||||||||||| | |||||| || || || | || || |||||||||||| |||||
Sbjct: 560 ttgtggaggcaagctaaccctttggcagcccctaatgcaatcgacatcctagtagcccag 501
Query: 1120 ggcaatggcgtagctgtctttcggaataagtggttttctagacttcctcgaaacatgaac 1179
| | ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gatagtggagtagctgtccttcggaataagtggttttctagacttcctcgaaacatgaac 441
Query: 1180 tcgtagacaagcagccgatggtcatcttcgcagcaatatccgatcaacttcaccaaattt 1239
||||| |||||||||| |||||||||||||||||||| || |||||||| | ||||||
Sbjct: 440 tcgtacacaagcagcctgtggtcatcttcgcagcaatacccaatcaacttgagtaaattt 381
Query: 1240 ggatgcctcaactgccccaggcagttaacctcggtaagccattctctgtgcccttgatgt 1299
||||| || | |||||| ||| | ||||||| ||||||||||||||||| |||||||||
Sbjct: 380 ggatgtcttagctgcccaaggaacctaacctcagtaagccattctctgtgtccttgatgt 321
Query: 1300 ccatctttgttgagcaccttgactgcaacaggcagtgacttcagcccaaccctgacattt 1359
|||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 320 ccatctttgttgagcaccttgactgcaacaggtagtgacttcagaccaaccctgacattc 261
Query: 1360 tcatctatgtaacccttgtaaacggtcccaaatcctccttcgccaagaacataatcaaca 1419
|||| |||||| ||||||||||| |||||||| |||||||| |||||||| || ||| ||
Sbjct: 260 tcatgtatgtagcccttgtaaacagtcccaaaccctccttcaccaagaacgtagtcagca 201
Query: 1420 cggaagctctttgtgattgtctctagctcaaacaatgtgaaggcaatcacatcgttgtat 1479
||||||||||||||||| ||||| || |||||||||||||| |||||||||||||||||
Sbjct: 200 cggaagctctttgtgatggtctcgagttcaaacaatgtgaaatcaatcacatcgttgtat 141
Query: 1480 atggaaatgttcttggcatcttcaactttcctaggtgtggaagggtcacttatatctgat 1539
||||| ||||||||||||||||||| |||| ||||||| ||||| ||||| | |||||||
Sbjct: 140 atggagatgttcttggcatcttcaattttcataggtgttgaaggatcactgagatctgat 81
Query: 1540 gacatgcaggtgtgcttcctatctgca 1566
|| |||| ||| |||||||| ||||||
Sbjct: 80 gagatgcgggtatgcttcctctctgca 54
>gb|CA755558.1|CA755558 BR030023000_PLATE_E10_77_082.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030023000_PLATE_E10_77_082.ab1 similar to NP_195722.1|
(NM_120179) protein kinase -like protein [Arabidopsis
thaliana], mRNA sequence
Length = 630
Score = 486 bits (245), Expect = e-134
Identities = 476/554 (85%)
Strand = Plus / Minus
Query: 691 tactgcccctccagcctcgggtcgatgatctggaggagcctcctcttgtcgttgagcttc 750
||||| |||||||| | ||||| ||||| ||| ||||||||||||||||| ||||||
Sbjct: 558 tactgtccctccagtttggggtcaatgattgngagaagcctcctcttgtcgttcagcttc 499
Query: 751 gggagcgcccagtccaccaggctctgctccctgctgggccgcgacttgtcgatcgacttg 810
||||| |||||||| |||| ||| |||||| |||||| ||| |||| |||||| |||||
Sbjct: 498 gggagggcccagtcaaccaagctatgctccntgctggcccgtgactngtcgatggactta 439
Query: 811 cgccccgtcaggagctccagcaggaccacgccgaagctgtacacgtcactccgagcagtc 870
||||| |||| ||| || || ||||| || || |||||||| || ||||| | |||||||
Sbjct: 438 cgcccagtcaagagttcaagaaggacaacaccaaagctgtagacatcacttctagcagtc 379
Query: 871 aagtgaccggtcatcacatattcaggggcagcataaccgtaggttcccatcacccgtgtc 930
|||||||| ||||||||||||||||||||||||||||| || |||||||||||||| ||
Sbjct: 378 aagtgaccagtcatcacatattcaggggcagcataaccatatgttcccatcacccgagtt 319
Query: 931 gacacatgcgtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagtttg 990
|| ||||| || ||||| ||||| |||||| ||||||| || ||||||||||| |||||
Sbjct: 318 gatacatgggtttgatcgccttctgggccagcttttgccagaccaaagtcagagagttta 259
Query: 991 gcagtataatcggagtccagcagaatgtttgatgtcttgaaatctctgtagatgacgggc 1050
||||||||||| |||||||||||||| ||||||||||||||||| |||||||| | |||
Sbjct: 258 gcagtataatctgagtccagcagaatatttgatgtcttgaaatccctgtagataattggc 199
Query: 1051 ctttgagcgttgtggaggcaagcgagccctttagcggctcccagcgcgattgacatccta 1110
|||| ||| |||||||||||||| | |||||| || ||||| | || || |||||||||
Sbjct: 198 ctttcagcattgtggaggcaagctaaccctttggcagctcctaatgcaatcgacatccta 139
Query: 1111 gtaccccagggcaatggcgtagctgtctttcggaataagtggttttctagacttcctcga 1170
||| |||| | | ||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 138 gtagcccacgatagtggagtagctgtccttcggaataagtggttttctagacttcctcga 79
Query: 1171 aacatgaactcgtagacaagcagccgatggtcatcttcgcagcaatatccgatcaacttc 1230
|||||||||||||| |||||||||| |||||||||||||||||||| || ||||||||
Sbjct: 78 aacatgaactcgtacacaagcagcctgtggtcatcttcgcagcaatacccaatcaacttg 19
Query: 1231 accaaatttggatg 1244
|| |||||||||||
Sbjct: 18 actaaatttggatg 5
>gb|D22444.2|D22444 RICC11129A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C11129_2A, mRNA sequence
Length = 446
Score = 468 bits (236), Expect = e-129
Identities = 389/440 (88%)
Strand = Plus / Minus
Query: 943 tgatcaccttcagggccatcttttgcgaggccaaagtcagacagtttggcagtataatcg 1002
||||| ||||| |||||| ||||||| || ||||||||||| ||||| |||||||||||
Sbjct: 443 tgatcgccttctgggccagcttttgccagaccaaagtcagagagtttagcagtataatct 384
Query: 1003 gagtccagcagaatgtttgatgtcttgaaatctctgtagatgacgggcctttgagcgttg 1062
|||||||||||||| ||||||||||||||||| |||||||| | ||||||| ||| |||
Sbjct: 383 gagtccagcagaatatttgatgtcttgaaatccctgtagataattggcctttcagcattg 324
Query: 1063 tggaggcaagcgagccctttagcggctcccagcgcgattgacatcctagtaccccagggc 1122
||||||||||| | |||||| || || || | || || |||||||||||| ||||||
Sbjct: 323 tggaggcaagctaaccctttggcagcccctaatgcaatcgacatcctagtagcccaggat 264
Query: 1123 aatggcgtagctgtctttcggaataagtggttttctagacttcctcgaaacatgaactcg 1182
| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agtggagtagctgtccttcggaataagtggttttctagacttcctcgaaacatgaactcg 204
Query: 1183 tagacaagcagccgatggtcatcttcgcagcaatatccgatcaacttcaccaaatttgga 1242
|| |||||||||| |||||||||||||||||||| || |||||||| || |||||||||
Sbjct: 203 tacacaagcagcctgtggtcatcttcgcagcaatacccaatcaacttgactaaatttgga 144
Query: 1243 tgcctcaactgccccaggcagttaacctcggtaagccattctctgtgcccttgatgtcca 1302
|| || | |||||| ||| | ||||||| ||||||||||||||||| ||||||||||||
Sbjct: 143 tgtcttagctgcccaaggaacctaacctcagtaagccattctctgtgtccttgatgtcca 84
Query: 1303 tctttgttgagcaccttgactgcaacaggcagtgacttcagcccaaccctgacattttca 1362
||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||
Sbjct: 83 tctttgttgagcaccttgactgcaacaggtagtgacttcagaccaaccctgacattctca 24
Query: 1363 tctatgtaacccttgtaaac 1382
|||||||| |||||||||||
Sbjct: 23 tctatgtagcccttgtaaac 4
>gb|C22460.1|C22460 C22460 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C62887_2A, mRNA sequence
Length = 463
Score = 438 bits (221), Expect = e-120
Identities = 332/369 (89%)
Strand = Plus / Minus
Query: 1198 tggtcatcttcgcagcaatatccgatcaacttcaccaaatttggatgcctcaactgcccc 1257
|||||||||||||||||||| || |||||||| || ||||||||||| || | ||||||
Sbjct: 463 tggtcatcttcgcagcaatacccaatcaacttgactaaatttggatgtcttagctgccca 404
Query: 1258 aggcagttaacctcggtaagccattctctgtgcccttgatgtccatctttgttgagcacc 1317
||| | ||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 403 aggaacctaacctcagtaagccattctctgtgtccttgatgtccatctttgttgagcacc 344
Query: 1318 ttgactgcaacaggcagtgacttcagcccaaccctgacattttcatctatgtaacccttg 1377
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 343 ttgactgcaacaggtagtgacttcagaccaaccctgacattctcatctatgtagcccttg 284
Query: 1378 taaacggtcccaaatcctccttcgccaagaacataatcaacacggaagctctttgtgatt 1437
||||| |||||||| |||||||| |||||||| || ||| |||||||||||||||||||
Sbjct: 283 taaacagtcccaaaccctccttcaccaagaacgtagtcagcacggaagctctttgtgatg 224
Query: 1438 gtctctagctcaaacaatgtgaaggcaatcacatcgttgtatatggaaatgttcttggca 1497
||||| || |||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 223 gtctcgagttcaaacaatgtgaaatcaatcacatcgttgtatatggagatgttcttggca 164
Query: 1498 tcttcaactttcctaggtgtggaagggtcacttatatctgatgacatgcaggtgtgcttc 1557
||||||| |||||||||||| ||||| ||||| ||||||||||| |||| ||| ||||||
Sbjct: 163 tcttcaattttcctaggtgttgaaggatcactcatatctgatgagatgcgggtatgcttc 104
Query: 1558 ctatctgca 1566
|| ||||||
Sbjct: 103 ctctctgca 95
>emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC OJ1126_F08 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 134217
Score = 381 bits (192), Expect = e-103
Identities = 267/292 (91%)
Strand = Plus / Plus
Query: 1275 aagccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcag 1334
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 131002 aagccattctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtag 131061
Query: 1335 tgacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcc 1394
||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 131062 tgacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcccaaaccc 131121
Query: 1395 tccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaa 1454
|||||| |||||||| || ||| ||||||||||||||||||| ||||| || ||||||||
Sbjct: 131122 tccttcaccaagaacgtagtcagcacggaagctctttgtgatggtctcgagttcaaacaa 131181
Query: 1455 tgtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaactttcctagg 1514
|||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 131182 tgtgaaatcaatcacatcgttgtatatggagatgttcttggcatcttcaattttcctagg 131241
Query: 1515 tgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
||| ||||| ||||| ||||||||||| |||| ||| |||||||| ||||||
Sbjct: 131242 tgttgaaggatcactcatatctgatgagatgcgggtatgcttcctctctgca 131293
Score = 190 bits (96), Expect = 2e-045
Identities = 237/284 (83%)
Strand = Plus / Plus
Query: 595 gtctcgacgacgtcgctcatgagcggcctggcctttgggttctggctcaggcagtagaac 654
||||| |||||||||||||| || ||||| ||||||||||| ||||||| ||||||| |
Sbjct: 128590 gtctcaacgacgtcgctcataagaggcctcgcctttgggttttggctcaagcagtagtat 128649
Query: 655 gcgaggctgcaggacttgtgagcggctctggccgagtactgcccctccagcctcgggtcg 714
|| |||||||||| ||||| || ||||| | || ||||| |||||||| | |||||
Sbjct: 128650 gctaggctgcaggctttgtgggcagctctaactgaatactgtccctccagttttgggtca 128709
Query: 715 atgatctggaggagcctcctcttgtcgttgagcttcgggagcgcccagtccaccaggctc 774
||||| ||||| ||||||||||||||||| || ||| |||| |||||||| |||| |||
Sbjct: 128710 atgatttggagaagcctcctcttgtcgttcagtttcaggagggcccagtcaaccaagctg 128769
Query: 775 tgctccctgctgggccgcgacttgtcgatcgacttgcgccccgtcaggagctccagcagg 834
|||||||| |||||||| ||||||||||| ||||| ||||| |||| ||| || || |||
Sbjct: 128770 tgctccctactgggccgtgacttgtcgatggacttacgcccagtcaagagttcaagaagg 128829
Query: 835 accacgccgaagctgtacacgtcactccgagcagtcaagtgacc 878
|| || || |||||||| || ||||| | |||||||||||||||
Sbjct: 128830 acaacaccaaagctgtagacatcacttctagcagtcaagtgacc 128873
Score = 155 bits (78), Expect = 9e-035
Identities = 99/106 (93%)
Strand = Plus / Plus
Query: 1139 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtagacaagcagccgat 1198
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 130213 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtacacaagcagcctgt 130272
Query: 1199 ggtcatcttcgcagcaatatccgatcaacttcaccaaatttggatg 1244
||||||||||||||||||| || |||||||| || |||||||||||
Sbjct: 130273 ggtcatcttcgcagcaatacccaatcaacttgactaaatttggatg 130318
Score = 131 bits (66), Expect = 1e-027
Identities = 108/122 (88%)
Strand = Plus / Plus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccatcacccgtgtcgacacatgc 939
|||||||| |||||||||||||||||||| || ||||||||||||||||| || |||||
Sbjct: 129057 gtcatcacgtattcaggggcagcataaccatatgttcccatcacccgtgttgatacatgg 129116
Query: 940 gtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagtttggcagtataa 999
|| ||||| ||||| |||||| ||||||| || ||||||||||| ||||| |||||||||
Sbjct: 129117 gtttgatcgccttctgggccagcttttgccagaccaaagtcagagagtttagcagtataa 129176
Query: 1000 tc 1001
||
Sbjct: 129177 tc 129178
Score = 93.7 bits (47), Expect = 3e-016
Identities = 113/135 (83%)
Strand = Plus / Plus
Query: 1003 gagtccagcagaatgtttgatgtcttgaaatctctgtagatgacgggcctttgagcgttg 1062
|||||||||||||| ||||||||||||||||| |||||||| | ||||||| ||| |||
Sbjct: 129295 gagtccagcagaatatttgatgtcttgaaatccctgtagataattggcctttcagcattg 129354
Query: 1063 tggaggcaagcgagccctttagcggctcccagcgcgattgacatcctagtaccccagggc 1122
||||||||||| | |||||| || || || | || || |||||||||||| ||||||
Sbjct: 129355 tggaggcaagctaaccctttggcagcccctaatgcaatcgacatcctagtagcccaggat 129414
Query: 1123 aatggcgtagctgtc 1137
| ||| |||||||||
Sbjct: 129415 agtggagtagctgtc 129429
Score = 58.0 bits (29), Expect = 2e-005
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 220 atccaaccgctcttagttcagccttccatttcttgggttaa 260
|||||||| |||||||||||||||| ||||||| |||||||
Sbjct: 128129 atccaaccactcttagttcagcctttcatttctggggttaa 128169
>ref|NT_107145.1| Oryza sativa (japonica cultivar-group)
Length = 1968172
Score = 381 bits (192), Expect = e-103
Identities = 267/292 (91%)
Strand = Plus / Plus
Query: 1275 aagccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcag 1334
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 993417 aagccattctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtag 993476
Query: 1335 tgacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcc 1394
||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 993477 tgacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcccaaaccc 993536
Query: 1395 tccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaa 1454
|||||| |||||||| || ||| ||||||||||||||||||| ||||| || ||||||||
Sbjct: 993537 tccttcaccaagaacgtagtcagcacggaagctctttgtgatggtctcgagttcaaacaa 993596
Query: 1455 tgtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaactttcctagg 1514
|||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 993597 tgtgaaatcaatcacatcgttgtatatggagatgttcttggcatcttcaattttcctagg 993656
Query: 1515 tgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
||| ||||| ||||| ||||||||||| |||| ||| |||||||| ||||||
Sbjct: 993657 tgttgaaggatcactcatatctgatgagatgcgggtatgcttcctctctgca 993708
Score = 190 bits (96), Expect = 2e-045
Identities = 237/284 (83%)
Strand = Plus / Plus
Query: 595 gtctcgacgacgtcgctcatgagcggcctggcctttgggttctggctcaggcagtagaac 654
||||| |||||||||||||| || ||||| ||||||||||| ||||||| ||||||| |
Sbjct: 991005 gtctcaacgacgtcgctcataagaggcctcgcctttgggttttggctcaagcagtagtat 991064
Query: 655 gcgaggctgcaggacttgtgagcggctctggccgagtactgcccctccagcctcgggtcg 714
|| |||||||||| ||||| || ||||| | || ||||| |||||||| | |||||
Sbjct: 991065 gctaggctgcaggctttgtgggcagctctaactgaatactgtccctccagttttgggtca 991124
Query: 715 atgatctggaggagcctcctcttgtcgttgagcttcgggagcgcccagtccaccaggctc 774
||||| ||||| ||||||||||||||||| || ||| |||| |||||||| |||| |||
Sbjct: 991125 atgatttggagaagcctcctcttgtcgttcagtttcaggagggcccagtcaaccaagctg 991184
Query: 775 tgctccctgctgggccgcgacttgtcgatcgacttgcgccccgtcaggagctccagcagg 834
|||||||| |||||||| ||||||||||| ||||| ||||| |||| ||| || || |||
Sbjct: 991185 tgctccctactgggccgtgacttgtcgatggacttacgcccagtcaagagttcaagaagg 991244
Query: 835 accacgccgaagctgtacacgtcactccgagcagtcaagtgacc 878
|| || || |||||||| || ||||| | |||||||||||||||
Sbjct: 991245 acaacaccaaagctgtagacatcacttctagcagtcaagtgacc 991288
Score = 155 bits (78), Expect = 9e-035
Identities = 99/106 (93%)
Strand = Plus / Plus
Query: 1139 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtagacaagcagccgat 1198
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 992628 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtacacaagcagcctgt 992687
Query: 1199 ggtcatcttcgcagcaatatccgatcaacttcaccaaatttggatg 1244
||||||||||||||||||| || |||||||| || |||||||||||
Sbjct: 992688 ggtcatcttcgcagcaatacccaatcaacttgactaaatttggatg 992733
Score = 131 bits (66), Expect = 1e-027
Identities = 108/122 (88%)
Strand = Plus / Plus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccatcacccgtgtcgacacatgc 939
|||||||| |||||||||||||||||||| || ||||||||||||||||| || |||||
Sbjct: 991472 gtcatcacgtattcaggggcagcataaccatatgttcccatcacccgtgttgatacatgg 991531
Query: 940 gtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagtttggcagtataa 999
|| ||||| ||||| |||||| ||||||| || ||||||||||| ||||| |||||||||
Sbjct: 991532 gtttgatcgccttctgggccagcttttgccagaccaaagtcagagagtttagcagtataa 991591
Query: 1000 tc 1001
||
Sbjct: 991592 tc 991593
Score = 93.7 bits (47), Expect = 3e-016
Identities = 113/135 (83%)
Strand = Plus / Plus
Query: 1003 gagtccagcagaatgtttgatgtcttgaaatctctgtagatgacgggcctttgagcgttg 1062
|||||||||||||| ||||||||||||||||| |||||||| | ||||||| ||| |||
Sbjct: 991710 gagtccagcagaatatttgatgtcttgaaatccctgtagataattggcctttcagcattg 991769
Query: 1063 tggaggcaagcgagccctttagcggctcccagcgcgattgacatcctagtaccccagggc 1122
||||||||||| | |||||| || || || | || || |||||||||||| ||||||
Sbjct: 991770 tggaggcaagctaaccctttggcagcccctaatgcaatcgacatcctagtagcccaggat 991829
Query: 1123 aatggcgtagctgtc 1137
| ||| |||||||||
Sbjct: 991830 agtggagtagctgtc 991844
Score = 58.0 bits (29), Expect = 2e-005
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 220 atccaaccgctcttagttcagccttccatttcttgggttaa 260
|||||||| |||||||||||||||| ||||||| |||||||
Sbjct: 990544 atccaaccactcttagttcagcctttcatttctggggttaa 990584
>gb|AC150775.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNAa0048P17,complete sequence
Length = 137127
Score = 381 bits (192), Expect = e-103
Identities = 267/292 (91%)
Strand = Plus / Plus
Query: 1275 aagccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcag 1334
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 27155 aagccattctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtag 27214
Query: 1335 tgacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcc 1394
||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 27215 tgacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcccaaaccc 27274
Query: 1395 tccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaa 1454
|||||| |||||||| || ||| ||||||||||| ||||||| ||||| || ||||||||
Sbjct: 27275 tccttcaccaagaacgtagtcagcacggaagctccttgtgatagtctcgagttcaaacaa 27334
Query: 1455 tgtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaactttcctagg 1514
||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 27335 tgtgaagtcaatcacatcattgtatatggagatgttcttggcatcttcaattttcctagg 27394
Query: 1515 tgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 27395 tgttgaaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 27446
Score = 331 bits (167), Expect = 7e-088
Identities = 265/294 (90%), Gaps = 4/294 (1%)
Strand = Plus / Plus
Query: 1275 aagccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcag 1334
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 46850 aagccattctctgtgtccttgatgtccatctttggtgagcaccttgactgcaacaggtag 46909
Query: 1335 tgacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcc 1394
||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 46910 tgacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcccaaaccc 46969
Query: 1395 tccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaa 1454
|||||| |||||||| || ||| |||||||| |||||||||| ||||| || ||||||||
Sbjct: 46970 tccttcaccaagaacgtagtcagcacggaagttctttgtgatggtctcgagttcaaacaa 47029
Query: 1455 tgtgaaggcaatcacat--cgttgtatatggaaatgttcttggcatcttcaactttccta 1512
||||||| ||||||||| || |||||||||| ||||||||||||||||||| |||||||
Sbjct: 47030 tgtgaagtcaatcacataacg-tgtatatggagatgttcttggcatcttcaattttccta 47088
Query: 1513 ggtgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
||||| |||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 47089 ggtgt-taaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 47141
Score = 309 bits (156), Expect = 3e-081
Identities = 262/297 (88%), Gaps = 9/297 (3%)
Strand = Plus / Plus
Query: 1276 agccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcagt 1335
|||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 36532 agccatcctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtagt 36591
Query: 1336 gacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcct 1395
|||||||| |||||||||||||| ||||||||||| ||||||||||| ||| |||| |||
Sbjct: 36592 gacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcacaaaccct 36651
Query: 1396 ccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaat 1455
||||| ||||||| || ||| |||||||||| |||||||| ||||| || |||||||||
Sbjct: 36652 ccttcaccaagaaggtagtcagcacggaagctttttgtgatggtctcaagttcaaacaat 36711
Query: 1456 gtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaac------tttc 1509
||| |||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 36712 ---aagtcaatcacatcgttgtatatggagatgttcttggcatcttcaacttcaattttc 36768
Query: 1510 ctaggtgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
|||||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 36769 ctaggtgttgaaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 36825
Score = 214 bits (108), Expect = 1e-052
Identities = 240/284 (84%)
Strand = Plus / Plus
Query: 595 gtctcgacgacgtcgctcatgagcggcctggcctttgggttctggctcaggcagtagaac 654
||||| |||||||||||||| || ||||| ||||||||||| ||||||| ||||||| |
Sbjct: 24735 gtctcaacgacgtcgctcataagaggcctcgcctttgggttttggctcaagcagtagtat 24794
Query: 655 gcgaggctgcaggacttgtgagcggctctggccgagtactgcccctccagcctcgggtcg 714
|| |||||||||| ||||| || ||||| | || ||||| |||||||| | |||||
Sbjct: 24795 gctaggctgcaggctttgtgggcagctctaactgaatactgtccctccagttttgggtca 24854
Query: 715 atgatctggaggagcctcctcttgtcgttgagcttcgggagcgcccagtccaccaggctc 774
||||| ||||| ||||||||||||||||| ||||||||||| |||||||| |||| |||
Sbjct: 24855 atgatttggagaagcctcctcttgtcgttcagcttcgggagggcccagtcaaccaagcta 24914
Query: 775 tgctccctgctgggccgcgacttgtcgatcgacttgcgccccgtcaggagctccagcagg 834
||||||||||||||||| ||||||||||| ||||| ||||| |||| ||| || || |||
Sbjct: 24915 tgctccctgctgggccgtgacttgtcgatggacttacgcccagtcaagagttcaagaagg 24974
Query: 835 accacgccgaagctgtacacgtcactccgagcagtcaagtgacc 878
|| || || |||||||| || ||||| | |||||||||||||||
Sbjct: 24975 acaacaccaaagctgtagacatcacttctagcagtcaagtgacc 25018
Score = 155 bits (78), Expect = 9e-035
Identities = 99/106 (93%)
Strand = Plus / Plus
Query: 1139 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtagacaagcagccgat 1198
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 26314 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtacacaagcagcctgt 26373
Query: 1199 ggtcatcttcgcagcaatatccgatcaacttcaccaaatttggatg 1244
||||||||||||||||||| || |||||||| || |||||||||||
Sbjct: 26374 ggtcatcttcgcagcaatacccaatcaacttgactaaatttggatg 26419
Score = 131 bits (66), Expect = 1e-027
Identities = 108/122 (88%)
Strand = Plus / Plus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccatcacccgtgtcgacacatgc 939
||||||||||||||||||||||||||||| || |||||||||||||| || || |||||
Sbjct: 25188 gtcatcacatattcaggggcagcataaccatatgttcccatcacccgagttgatacatgg 25247
Query: 940 gtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagtttggcagtataa 999
|| ||||| ||||| |||||| ||||||| || ||||||||||| ||||| |||||||||
Sbjct: 25248 gtttgatcgccttctgggccagcttttgccagaccaaagtcagagagtttagcagtataa 25307
Query: 1000 tc 1001
||
Sbjct: 25308 tc 25309
Score = 95.6 bits (48), Expect = 7e-017
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 1003 gagtccagcagaatgtttgatgtcttgaaatctctgtagatgacgggcctttgagcgttg 1062
|||||||||||||| ||||||||||||||||| |||||||| | ||||||| ||| |||
Sbjct: 25427 gagtccagcagaatatttgatgtcttgaaatccctgtagataattggcctttcagcattg 25486
Query: 1063 tggaggcaagcgagccctttagcggctcccagcgcgattgacatcctagtacccca 1118
||||||||||| | |||||| || ||||| | || || |||||||||||| ||||
Sbjct: 25487 tggaggcaagctaaccctttggcagctcctaatgcaatcgacatcctagtagccca 25542
Score = 48.1 bits (24), Expect = 0.015
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 229 ctcttagttcagccttccatttcttgggttaa 260
|||||||||||||||| ||||||| |||||||
Sbjct: 24278 ctcttagttcagcctttcatttctggggttaa 24309
>gb|AC136969.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0048P17,
complete sequence
Length = 149883
Score = 381 bits (192), Expect = e-103
Identities = 267/292 (91%)
Strand = Plus / Plus
Query: 1275 aagccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcag 1334
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 117037 aagccattctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtag 117096
Query: 1335 tgacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcc 1394
||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 117097 tgacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcccaaaccc 117156
Query: 1395 tccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaa 1454
|||||| |||||||| || ||| ||||||||||| ||||||| ||||| || ||||||||
Sbjct: 117157 tccttcaccaagaacgtagtcagcacggaagctccttgtgatagtctcgagttcaaacaa 117216
Query: 1455 tgtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaactttcctagg 1514
||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 117217 tgtgaagtcaatcacatcattgtatatggagatgttcttggcatcttcaattttcctagg 117276
Query: 1515 tgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 117277 tgttgaaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 117328
Score = 331 bits (167), Expect = 7e-088
Identities = 265/294 (90%), Gaps = 4/294 (1%)
Strand = Plus / Plus
Query: 1275 aagccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcag 1334
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 136732 aagccattctctgtgtccttgatgtccatctttggtgagcaccttgactgcaacaggtag 136791
Query: 1335 tgacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcc 1394
||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 136792 tgacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcccaaaccc 136851
Query: 1395 tccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaa 1454
|||||| |||||||| || ||| |||||||| |||||||||| ||||| || ||||||||
Sbjct: 136852 tccttcaccaagaacgtagtcagcacggaagttctttgtgatggtctcgagttcaaacaa 136911
Query: 1455 tgtgaaggcaatcacat--cgttgtatatggaaatgttcttggcatcttcaactttccta 1512
||||||| ||||||||| || |||||||||| ||||||||||||||||||| |||||||
Sbjct: 136912 tgtgaagtcaatcacataacg-tgtatatggagatgttcttggcatcttcaattttccta 136970
Query: 1513 ggtgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
||||| |||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 136971 ggtgt-taaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 137023
Score = 309 bits (156), Expect = 3e-081
Identities = 262/297 (88%), Gaps = 9/297 (3%)
Strand = Plus / Plus
Query: 1276 agccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcagt 1335
|||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 126414 agccatcctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtagt 126473
Query: 1336 gacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcct 1395
|||||||| |||||||||||||| ||||||||||| ||||||||||| ||| |||| |||
Sbjct: 126474 gacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcacaaaccct 126533
Query: 1396 ccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaat 1455
||||| ||||||| || ||| |||||||||| |||||||| ||||| || |||||||||
Sbjct: 126534 ccttcaccaagaaggtagtcagcacggaagctttttgtgatggtctcaagttcaaacaat 126593
Query: 1456 gtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaac------tttc 1509
||| |||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 126594 ---aagtcaatcacatcgttgtatatggagatgttcttggcatcttcaacttcaattttc 126650
Query: 1510 ctaggtgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
|||||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 126651 ctaggtgttgaaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 126707
Score = 214 bits (108), Expect = 1e-052
Identities = 240/284 (84%)
Strand = Plus / Plus
Query: 595 gtctcgacgacgtcgctcatgagcggcctggcctttgggttctggctcaggcagtagaac 654
||||| |||||||||||||| || ||||| ||||||||||| ||||||| ||||||| |
Sbjct: 114617 gtctcaacgacgtcgctcataagaggcctcgcctttgggttttggctcaagcagtagtat 114676
Query: 655 gcgaggctgcaggacttgtgagcggctctggccgagtactgcccctccagcctcgggtcg 714
|| |||||||||| ||||| || ||||| | || ||||| |||||||| | |||||
Sbjct: 114677 gctaggctgcaggctttgtgggcagctctaactgaatactgtccctccagttttgggtca 114736
Query: 715 atgatctggaggagcctcctcttgtcgttgagcttcgggagcgcccagtccaccaggctc 774
||||| ||||| ||||||||||||||||| ||||||||||| |||||||| |||| |||
Sbjct: 114737 atgatttggagaagcctcctcttgtcgttcagcttcgggagggcccagtcaaccaagcta 114796
Query: 775 tgctccctgctgggccgcgacttgtcgatcgacttgcgccccgtcaggagctccagcagg 834
||||||||||||||||| ||||||||||| ||||| ||||| |||| ||| || || |||
Sbjct: 114797 tgctccctgctgggccgtgacttgtcgatggacttacgcccagtcaagagttcaagaagg 114856
Query: 835 accacgccgaagctgtacacgtcactccgagcagtcaagtgacc 878
|| || || |||||||| || ||||| | |||||||||||||||
Sbjct: 114857 acaacaccaaagctgtagacatcacttctagcagtcaagtgacc 114900
Score = 155 bits (78), Expect = 9e-035
Identities = 99/106 (93%)
Strand = Plus / Plus
Query: 1139 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtagacaagcagccgat 1198
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 116196 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtacacaagcagcctgt 116255
Query: 1199 ggtcatcttcgcagcaatatccgatcaacttcaccaaatttggatg 1244
||||||||||||||||||| || |||||||| || |||||||||||
Sbjct: 116256 ggtcatcttcgcagcaatacccaatcaacttgactaaatttggatg 116301
Score = 131 bits (66), Expect = 1e-027
Identities = 108/122 (88%)
Strand = Plus / Plus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccatcacccgtgtcgacacatgc 939
||||||||||||||||||||||||||||| || |||||||||||||| || || |||||
Sbjct: 115070 gtcatcacatattcaggggcagcataaccatatgttcccatcacccgagttgatacatgg 115129
Query: 940 gtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagtttggcagtataa 999
|| ||||| ||||| |||||| ||||||| || ||||||||||| ||||| |||||||||
Sbjct: 115130 gtttgatcgccttctgggccagcttttgccagaccaaagtcagagagtttagcagtataa 115189
Query: 1000 tc 1001
||
Sbjct: 115190 tc 115191
Score = 95.6 bits (48), Expect = 7e-017
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 1003 gagtccagcagaatgtttgatgtcttgaaatctctgtagatgacgggcctttgagcgttg 1062
|||||||||||||| ||||||||||||||||| |||||||| | ||||||| ||| |||
Sbjct: 115309 gagtccagcagaatatttgatgtcttgaaatccctgtagataattggcctttcagcattg 115368
Query: 1063 tggaggcaagcgagccctttagcggctcccagcgcgattgacatcctagtacccca 1118
||||||||||| | |||||| || ||||| | || || |||||||||||| ||||
Sbjct: 115369 tggaggcaagctaaccctttggcagctcctaatgcaatcgacatcctagtagccca 115424
Score = 48.1 bits (24), Expect = 0.015
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 229 ctcttagttcagccttccatttcttgggttaa 260
|||||||||||||||| ||||||| |||||||
Sbjct: 114160 ctcttagttcagcctttcatttctggggttaa 114191
>gb|AACV01022262.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg022262, whole
genome shotgun sequence
Length = 35051
Score = 381 bits (192), Expect = e-103
Identities = 267/292 (91%)
Strand = Plus / Plus
Query: 1275 aagccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcag 1334
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 13586 aagccattctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtag 13645
Query: 1335 tgacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcc 1394
||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 13646 tgacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcccaaaccc 13705
Query: 1395 tccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaa 1454
|||||| |||||||| || ||| ||||||||||| ||||||| ||||| || ||||||||
Sbjct: 13706 tccttcaccaagaacgtagtcagcacggaagctccttgtgatagtctcgagttcaaacaa 13765
Query: 1455 tgtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaactttcctagg 1514
||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 13766 tgtgaagtcaatcacatcattgtatatggagatgttcttggcatcttcaattttcctagg 13825
Query: 1515 tgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 13826 tgttgaaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 13877
Score = 331 bits (167), Expect = 7e-088
Identities = 265/294 (90%), Gaps = 4/294 (1%)
Strand = Plus / Plus
Query: 1275 aagccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcag 1334
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 33250 aagccattctctgtgtccttgatgtccatctttggtgagcaccttgactgcaacaggtag 33309
Query: 1335 tgacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcc 1394
||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 33310 tgacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcccaaaccc 33369
Query: 1395 tccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaa 1454
|||||| |||||||| || ||| |||||||| |||||||||| ||||| || ||||||||
Sbjct: 33370 tccttcaccaagaacgtagtcagcacggaagttctttgtgatggtctcgagttcaaacaa 33429
Query: 1455 tgtgaaggcaatcacat--cgttgtatatggaaatgttcttggcatcttcaactttccta 1512
||||||| ||||||||| || |||||||||| ||||||||||||||||||| |||||||
Sbjct: 33430 tgtgaagtcaatcacataacg-tgtatatggagatgttcttggcatcttcaattttccta 33488
Query: 1513 ggtgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
||||| |||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 33489 ggtgt-taaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 33541
Score = 309 bits (156), Expect = 3e-081
Identities = 262/297 (88%), Gaps = 9/297 (3%)
Strand = Plus / Plus
Query: 1276 agccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcagt 1335
|||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 22932 agccatcctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtagt 22991
Query: 1336 gacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcct 1395
|||||||| |||||||||||||| ||||||||||| ||||||||||| ||| |||| |||
Sbjct: 22992 gacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcacaaaccct 23051
Query: 1396 ccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaat 1455
||||| ||||||| || ||| |||||||||| |||||||| ||||| || |||||||||
Sbjct: 23052 ccttcaccaagaaggtagtcagcacggaagctttttgtgatggtctcaagttcaaacaat 23111
Query: 1456 gtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaac------tttc 1509
||| |||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 23112 ---aagtcaatcacatcgttgtatatggagatgttcttggcatcttcaacttcaattttc 23168
Query: 1510 ctaggtgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
|||||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 23169 ctaggtgttgaaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 23225
Score = 214 bits (108), Expect = 1e-052
Identities = 240/284 (84%)
Strand = Plus / Plus
Query: 595 gtctcgacgacgtcgctcatgagcggcctggcctttgggttctggctcaggcagtagaac 654
||||| |||||||||||||| || ||||| ||||||||||| ||||||| ||||||| |
Sbjct: 11166 gtctcaacgacgtcgctcataagaggcctcgcctttgggttttggctcaagcagtagtat 11225
Query: 655 gcgaggctgcaggacttgtgagcggctctggccgagtactgcccctccagcctcgggtcg 714
|| |||||||||| ||||| || ||||| | || ||||| |||||||| | |||||
Sbjct: 11226 gctaggctgcaggctttgtgggcagctctaactgaatactgtccctccagttttgggtca 11285
Query: 715 atgatctggaggagcctcctcttgtcgttgagcttcgggagcgcccagtccaccaggctc 774
||||| ||||| ||||||||||||||||| ||||||||||| |||||||| |||| |||
Sbjct: 11286 atgatttggagaagcctcctcttgtcgttcagcttcgggagggcccagtcaaccaagcta 11345
Query: 775 tgctccctgctgggccgcgacttgtcgatcgacttgcgccccgtcaggagctccagcagg 834
||||||||||||||||| ||||||||||| ||||| ||||| |||| ||| || || |||
Sbjct: 11346 tgctccctgctgggccgtgacttgtcgatggacttacgcccagtcaagagttcaagaagg 11405
Query: 835 accacgccgaagctgtacacgtcactccgagcagtcaagtgacc 878
|| || || |||||||| || ||||| | |||||||||||||||
Sbjct: 11406 acaacaccaaagctgtagacatcacttctagcagtcaagtgacc 11449
Score = 155 bits (78), Expect = 9e-035
Identities = 99/106 (93%)
Strand = Plus / Plus
Query: 1139 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtagacaagcagccgat 1198
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 12745 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtacacaagcagcctgt 12804
Query: 1199 ggtcatcttcgcagcaatatccgatcaacttcaccaaatttggatg 1244
||||||||||||||||||| || |||||||| || |||||||||||
Sbjct: 12805 ggtcatcttcgcagcaatacccaatcaacttgactaaatttggatg 12850
Score = 131 bits (66), Expect = 1e-027
Identities = 108/122 (88%)
Strand = Plus / Plus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccatcacccgtgtcgacacatgc 939
||||||||||||||||||||||||||||| || |||||||||||||| || || |||||
Sbjct: 11619 gtcatcacatattcaggggcagcataaccatatgttcccatcacccgagttgatacatgg 11678
Query: 940 gtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagtttggcagtataa 999
|| ||||| ||||| |||||| ||||||| || ||||||||||| ||||| |||||||||
Sbjct: 11679 gtttgatcgccttctgggccagcttttgccagaccaaagtcagagagtttagcagtataa 11738
Query: 1000 tc 1001
||
Sbjct: 11739 tc 11740
Score = 95.6 bits (48), Expect = 7e-017
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 1003 gagtccagcagaatgtttgatgtcttgaaatctctgtagatgacgggcctttgagcgttg 1062
|||||||||||||| ||||||||||||||||| |||||||| | ||||||| ||| |||
Sbjct: 11858 gagtccagcagaatatttgatgtcttgaaatccctgtagataattggcctttcagcattg 11917
Query: 1063 tggaggcaagcgagccctttagcggctcccagcgcgattgacatcctagtacccca 1118
||||||||||| | |||||| || ||||| | || || |||||||||||| ||||
Sbjct: 11918 tggaggcaagctaaccctttggcagctcctaatgcaatcgacatcctagtagccca 11973
Score = 48.1 bits (24), Expect = 0.015
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 229 ctcttagttcagccttccatttcttgggttaa 260
|||||||||||||||| ||||||| |||||||
Sbjct: 10709 ctcttagttcagcctttcatttctggggttaa 10740
>gb|AACV01023877.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg023877, whole
genome shotgun sequence
Length = 38131
Score = 381 bits (192), Expect = e-103
Identities = 267/292 (91%)
Strand = Plus / Minus
Query: 1275 aagccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcag 1334
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 22248 aagccattctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtag 22189
Query: 1335 tgacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcc 1394
||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 22188 tgacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcccaaaccc 22129
Query: 1395 tccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaa 1454
|||||| |||||||| || ||| ||||||||||||||||||| ||||| || ||||||||
Sbjct: 22128 tccttcaccaagaacgtagtcagcacggaagctctttgtgatggtctcgagttcaaacaa 22069
Query: 1455 tgtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaactttcctagg 1514
|||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 22068 tgtgaaatcaatcacatcgttgtatatggagatgttcttggcatcttcaattttcctagg 22009
Query: 1515 tgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
||| ||||| ||||| ||||||||||| |||| ||| |||||||| ||||||
Sbjct: 22008 tgttgaaggatcactcatatctgatgagatgcgggtatgcttcctctctgca 21957
Score = 190 bits (96), Expect = 2e-045
Identities = 237/284 (83%)
Strand = Plus / Minus
Query: 595 gtctcgacgacgtcgctcatgagcggcctggcctttgggttctggctcaggcagtagaac 654
||||| |||||||||||||| || ||||| ||||||||||| ||||||| ||||||| |
Sbjct: 24660 gtctcaacgacgtcgctcataagaggcctcgcctttgggttttggctcaagcagtagtat 24601
Query: 655 gcgaggctgcaggacttgtgagcggctctggccgagtactgcccctccagcctcgggtcg 714
|| |||||||||| ||||| || ||||| | || ||||| |||||||| | |||||
Sbjct: 24600 gctaggctgcaggctttgtgggcagctctaactgaatactgtccctccagttttgggtca 24541
Query: 715 atgatctggaggagcctcctcttgtcgttgagcttcgggagcgcccagtccaccaggctc 774
||||| ||||| ||||||||||||||||| || ||| |||| |||||||| |||| |||
Sbjct: 24540 atgatttggagaagcctcctcttgtcgttcagtttcaggagggcccagtcaaccaagctg 24481
Query: 775 tgctccctgctgggccgcgacttgtcgatcgacttgcgccccgtcaggagctccagcagg 834
|||||||| |||||||| ||||||||||| ||||| ||||| |||| ||| || || |||
Sbjct: 24480 tgctccctactgggccgtgacttgtcgatggacttacgcccagtcaagagttcaagaagg 24421
Query: 835 accacgccgaagctgtacacgtcactccgagcagtcaagtgacc 878
|| || || |||||||| || ||||| | |||||||||||||||
Sbjct: 24420 acaacaccaaagctgtagacatcacttctagcagtcaagtgacc 24377
Score = 155 bits (78), Expect = 9e-035
Identities = 99/106 (93%)
Strand = Plus / Minus
Query: 1139 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtagacaagcagccgat 1198
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 23037 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtacacaagcagcctgt 22978
Query: 1199 ggtcatcttcgcagcaatatccgatcaacttcaccaaatttggatg 1244
||||||||||||||||||| || |||||||| || |||||||||||
Sbjct: 22977 ggtcatcttcgcagcaatacccaatcaacttgactaaatttggatg 22932
Score = 131 bits (66), Expect = 1e-027
Identities = 108/122 (88%)
Strand = Plus / Minus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccatcacccgtgtcgacacatgc 939
|||||||| |||||||||||||||||||| || ||||||||||||||||| || |||||
Sbjct: 24193 gtcatcacgtattcaggggcagcataaccatatgttcccatcacccgtgttgatacatgg 24134
Query: 940 gtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagtttggcagtataa 999
|| ||||| ||||| |||||| ||||||| || ||||||||||| ||||| |||||||||
Sbjct: 24133 gtttgatcgccttctgggccagcttttgccagaccaaagtcagagagtttagcagtataa 24074
Query: 1000 tc 1001
||
Sbjct: 24073 tc 24072
Score = 93.7 bits (47), Expect = 3e-016
Identities = 113/135 (83%)
Strand = Plus / Minus
Query: 1003 gagtccagcagaatgtttgatgtcttgaaatctctgtagatgacgggcctttgagcgttg 1062
|||||||||||||| ||||||||||||||||| |||||||| | ||||||| ||| |||
Sbjct: 23955 gagtccagcagaatatttgatgtcttgaaatccctgtagataattggcctttcagcattg 23896
Query: 1063 tggaggcaagcgagccctttagcggctcccagcgcgattgacatcctagtaccccagggc 1122
||||||||||| | |||||| || || || | || || |||||||||||| ||||||
Sbjct: 23895 tggaggcaagctaaccctttggcagcccctaatgcaatcgacatcctagtagcccaggat 23836
Query: 1123 aatggcgtagctgtc 1137
| ||| |||||||||
Sbjct: 23835 agtggagtagctgtc 23821
Score = 58.0 bits (29), Expect = 2e-005
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 220 atccaaccgctcttagttcagccttccatttcttgggttaa 260
|||||||| |||||||||||||||| ||||||| |||||||
Sbjct: 25121 atccaaccactcttagttcagcctttcatttctggggttaa 25081
>gb|CH401272.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000109
genomic scaffold, whole genome shotgun sequence
Length = 5753019
Score = 381 bits (192), Expect = e-103
Identities = 267/292 (91%)
Strand = Plus / Plus
Query: 1275 aagccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcag 1334
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 907309 aagccattctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtag 907368
Query: 1335 tgacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcc 1394
||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 907369 tgacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcccaaaccc 907428
Query: 1395 tccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaa 1454
|||||| |||||||| || ||| ||||||||||||||||||| ||||| || ||||||||
Sbjct: 907429 tccttcaccaagaacgtagtcagcacggaagctctttgtgatggtctcgagttcaaacaa 907488
Query: 1455 tgtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaactttcctagg 1514
|||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 907489 tgtgaaatcaatcacatcgttgtatatggagatgttcttggcatcttcaattttcctagg 907548
Query: 1515 tgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
||| ||||| ||||| ||||||||||| |||| ||| |||||||| ||||||
Sbjct: 907549 tgttgaaggatcactcatatctgatgagatgcgggtatgcttcctctctgca 907600
Score = 190 bits (96), Expect = 2e-045
Identities = 237/284 (83%)
Strand = Plus / Plus
Query: 595 gtctcgacgacgtcgctcatgagcggcctggcctttgggttctggctcaggcagtagaac 654
||||| |||||||||||||| || ||||| ||||||||||| ||||||| ||||||| |
Sbjct: 904897 gtctcaacgacgtcgctcataagaggcctcgcctttgggttttggctcaagcagtagtat 904956
Query: 655 gcgaggctgcaggacttgtgagcggctctggccgagtactgcccctccagcctcgggtcg 714
|| |||||||||| ||||| || ||||| | || ||||| |||||||| | |||||
Sbjct: 904957 gctaggctgcaggctttgtgggcagctctaactgaatactgtccctccagttttgggtca 905016
Query: 715 atgatctggaggagcctcctcttgtcgttgagcttcgggagcgcccagtccaccaggctc 774
||||| ||||| ||||||||||||||||| || ||| |||| |||||||| |||| |||
Sbjct: 905017 atgatttggagaagcctcctcttgtcgttcagtttcaggagggcccagtcaaccaagctg 905076
Query: 775 tgctccctgctgggccgcgacttgtcgatcgacttgcgccccgtcaggagctccagcagg 834
|||||||| |||||||| ||||||||||| ||||| ||||| |||| ||| || || |||
Sbjct: 905077 tgctccctactgggccgtgacttgtcgatggacttacgcccagtcaagagttcaagaagg 905136
Query: 835 accacgccgaagctgtacacgtcactccgagcagtcaagtgacc 878
|| || || |||||||| || ||||| | |||||||||||||||
Sbjct: 905137 acaacaccaaagctgtagacatcacttctagcagtcaagtgacc 905180
Score = 155 bits (78), Expect = 9e-035
Identities = 99/106 (93%)
Strand = Plus / Plus
Query: 1139 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtagacaagcagccgat 1198
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 906520 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtacacaagcagcctgt 906579
Query: 1199 ggtcatcttcgcagcaatatccgatcaacttcaccaaatttggatg 1244
||||||||||||||||||| || |||||||| || |||||||||||
Sbjct: 906580 ggtcatcttcgcagcaatacccaatcaacttgactaaatttggatg 906625
Score = 131 bits (66), Expect = 1e-027
Identities = 108/122 (88%)
Strand = Plus / Plus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccatcacccgtgtcgacacatgc 939
|||||||| |||||||||||||||||||| || ||||||||||||||||| || |||||
Sbjct: 905364 gtcatcacgtattcaggggcagcataaccatatgttcccatcacccgtgttgatacatgg 905423
Query: 940 gtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagtttggcagtataa 999
|| ||||| ||||| |||||| ||||||| || ||||||||||| ||||| |||||||||
Sbjct: 905424 gtttgatcgccttctgggccagcttttgccagaccaaagtcagagagtttagcagtataa 905483
Query: 1000 tc 1001
||
Sbjct: 905484 tc 905485
Score = 93.7 bits (47), Expect = 3e-016
Identities = 113/135 (83%)
Strand = Plus / Plus
Query: 1003 gagtccagcagaatgtttgatgtcttgaaatctctgtagatgacgggcctttgagcgttg 1062
|||||||||||||| ||||||||||||||||| |||||||| | ||||||| ||| |||
Sbjct: 905602 gagtccagcagaatatttgatgtcttgaaatccctgtagataattggcctttcagcattg 905661
Query: 1063 tggaggcaagcgagccctttagcggctcccagcgcgattgacatcctagtaccccagggc 1122
||||||||||| | |||||| || || || | || || |||||||||||| ||||||
Sbjct: 905662 tggaggcaagctaaccctttggcagcccctaatgcaatcgacatcctagtagcccaggat 905721
Query: 1123 aatggcgtagctgtc 1137
| ||| |||||||||
Sbjct: 905722 agtggagtagctgtc 905736
Score = 58.0 bits (29), Expect = 2e-005
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 220 atccaaccgctcttagttcagccttccatttcttgggttaa 260
|||||||| |||||||||||||||| ||||||| |||||||
Sbjct: 904436 atccaaccactcttagttcagcctttcatttctggggttaa 904476
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 825 ctccagcaggaccacgccgaagctgtacacgtcactccg 863
||||||||| | ||||||||||||||||||||| |||||
Sbjct: 5467130 ctccagcagcagcacgccgaagctgtacacgtcgctccg 5467092
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 825 ctccagcaggaccacgccgaagctgtacacgtcactccg 863
||||||||| | ||||||||||||||||||||| |||||
Sbjct: 5465620 ctccagcagcagcacgccgaagctgtacacgtcgctccg 5465582
>gb|CH401257.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000094
genomic scaffold, whole genome shotgun sequence
Length = 4775249
Score = 381 bits (192), Expect = e-103
Identities = 267/292 (91%)
Strand = Plus / Plus
Query: 1275 aagccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcag 1334
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 658663 aagccattctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtag 658722
Query: 1335 tgacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcc 1394
||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 658723 tgacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcccaaaccc 658782
Query: 1395 tccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaa 1454
|||||| |||||||| || ||| ||||||||||| ||||||| ||||| || ||||||||
Sbjct: 658783 tccttcaccaagaacgtagtcagcacggaagctccttgtgatagtctcgagttcaaacaa 658842
Query: 1455 tgtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaactttcctagg 1514
||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 658843 tgtgaagtcaatcacatcattgtatatggagatgttcttggcatcttcaattttcctagg 658902
Query: 1515 tgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 658903 tgttgaaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 658954
Score = 331 bits (167), Expect = 7e-088
Identities = 265/294 (90%), Gaps = 4/294 (1%)
Strand = Plus / Plus
Query: 1275 aagccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcag 1334
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 678327 aagccattctctgtgtccttgatgtccatctttggtgagcaccttgactgcaacaggtag 678386
Query: 1335 tgacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcc 1394
||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 678387 tgacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcccaaaccc 678446
Query: 1395 tccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaa 1454
|||||| |||||||| || ||| |||||||| |||||||||| ||||| || ||||||||
Sbjct: 678447 tccttcaccaagaacgtagtcagcacggaagttctttgtgatggtctcgagttcaaacaa 678506
Query: 1455 tgtgaaggcaatcacat--cgttgtatatggaaatgttcttggcatcttcaactttccta 1512
||||||| ||||||||| || |||||||||| ||||||||||||||||||| |||||||
Sbjct: 678507 tgtgaagtcaatcacataacg-tgtatatggagatgttcttggcatcttcaattttccta 678565
Query: 1513 ggtgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
||||| |||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 678566 ggtgt-taaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 678618
Score = 309 bits (156), Expect = 3e-081
Identities = 262/297 (88%), Gaps = 9/297 (3%)
Strand = Plus / Plus
Query: 1276 agccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcagt 1335
|||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 668009 agccatcctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtagt 668068
Query: 1336 gacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcct 1395
|||||||| |||||||||||||| ||||||||||| ||||||||||| ||| |||| |||
Sbjct: 668069 gacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcacaaaccct 668128
Query: 1396 ccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaat 1455
||||| ||||||| || ||| |||||||||| |||||||| ||||| || |||||||||
Sbjct: 668129 ccttcaccaagaaggtagtcagcacggaagctttttgtgatggtctcaagttcaaacaat 668188
Query: 1456 gtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaac------tttc 1509
||| |||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 668189 ---aagtcaatcacatcgttgtatatggagatgttcttggcatcttcaacttcaattttc 668245
Query: 1510 ctaggtgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
|||||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 668246 ctaggtgttgaaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 668302
Score = 214 bits (108), Expect = 1e-052
Identities = 240/284 (84%)
Strand = Plus / Plus
Query: 595 gtctcgacgacgtcgctcatgagcggcctggcctttgggttctggctcaggcagtagaac 654
||||| |||||||||||||| || ||||| ||||||||||| ||||||| ||||||| |
Sbjct: 656243 gtctcaacgacgtcgctcataagaggcctcgcctttgggttttggctcaagcagtagtat 656302
Query: 655 gcgaggctgcaggacttgtgagcggctctggccgagtactgcccctccagcctcgggtcg 714
|| |||||||||| ||||| || ||||| | || ||||| |||||||| | |||||
Sbjct: 656303 gctaggctgcaggctttgtgggcagctctaactgaatactgtccctccagttttgggtca 656362
Query: 715 atgatctggaggagcctcctcttgtcgttgagcttcgggagcgcccagtccaccaggctc 774
||||| ||||| ||||||||||||||||| ||||||||||| |||||||| |||| |||
Sbjct: 656363 atgatttggagaagcctcctcttgtcgttcagcttcgggagggcccagtcaaccaagcta 656422
Query: 775 tgctccctgctgggccgcgacttgtcgatcgacttgcgccccgtcaggagctccagcagg 834
||||||||||||||||| ||||||||||| ||||| ||||| |||| ||| || || |||
Sbjct: 656423 tgctccctgctgggccgtgacttgtcgatggacttacgcccagtcaagagttcaagaagg 656482
Query: 835 accacgccgaagctgtacacgtcactccgagcagtcaagtgacc 878
|| || || |||||||| || ||||| | |||||||||||||||
Sbjct: 656483 acaacaccaaagctgtagacatcacttctagcagtcaagtgacc 656526
Score = 155 bits (78), Expect = 9e-035
Identities = 99/106 (93%)
Strand = Plus / Plus
Query: 1139 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtagacaagcagccgat 1198
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 657822 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtacacaagcagcctgt 657881
Query: 1199 ggtcatcttcgcagcaatatccgatcaacttcaccaaatttggatg 1244
||||||||||||||||||| || |||||||| || |||||||||||
Sbjct: 657882 ggtcatcttcgcagcaatacccaatcaacttgactaaatttggatg 657927
Score = 131 bits (66), Expect = 1e-027
Identities = 108/122 (88%)
Strand = Plus / Plus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccatcacccgtgtcgacacatgc 939
||||||||||||||||||||||||||||| || |||||||||||||| || || |||||
Sbjct: 656696 gtcatcacatattcaggggcagcataaccatatgttcccatcacccgagttgatacatgg 656755
Query: 940 gtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagtttggcagtataa 999
|| ||||| ||||| |||||| ||||||| || ||||||||||| ||||| |||||||||
Sbjct: 656756 gtttgatcgccttctgggccagcttttgccagaccaaagtcagagagtttagcagtataa 656815
Query: 1000 tc 1001
||
Sbjct: 656816 tc 656817
Score = 95.6 bits (48), Expect = 7e-017
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 1003 gagtccagcagaatgtttgatgtcttgaaatctctgtagatgacgggcctttgagcgttg 1062
|||||||||||||| ||||||||||||||||| |||||||| | ||||||| ||| |||
Sbjct: 656935 gagtccagcagaatatttgatgtcttgaaatccctgtagataattggcctttcagcattg 656994
Query: 1063 tggaggcaagcgagccctttagcggctcccagcgcgattgacatcctagtacccca 1118
||||||||||| | |||||| || ||||| | || || |||||||||||| ||||
Sbjct: 656995 tggaggcaagctaaccctttggcagctcctaatgcaatcgacatcctagtagccca 657050
Score = 48.1 bits (24), Expect = 0.015
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 229 ctcttagttcagccttccatttcttgggttaa 260
|||||||||||||||| ||||||| |||||||
Sbjct: 655786 ctcttagttcagcctttcatttctggggttaa 655817
>gb|CM000149.1| Oryza sativa (japonica cultivar-group) chromosome 12, whole genome
shotgun sequence
Length = 23730396
Score = 381 bits (192), Expect = e-103
Identities = 267/292 (91%)
Strand = Plus / Plus
Query: 1275 aagccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcag 1334
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 907309 aagccattctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtag 907368
Query: 1335 tgacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcc 1394
||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 907369 tgacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcccaaaccc 907428
Query: 1395 tccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaa 1454
|||||| |||||||| || ||| ||||||||||||||||||| ||||| || ||||||||
Sbjct: 907429 tccttcaccaagaacgtagtcagcacggaagctctttgtgatggtctcgagttcaaacaa 907488
Query: 1455 tgtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaactttcctagg 1514
|||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 907489 tgtgaaatcaatcacatcgttgtatatggagatgttcttggcatcttcaattttcctagg 907548
Query: 1515 tgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
||| ||||| ||||| ||||||||||| |||| ||| |||||||| ||||||
Sbjct: 907549 tgttgaaggatcactcatatctgatgagatgcgggtatgcttcctctctgca 907600
Score = 190 bits (96), Expect = 2e-045
Identities = 237/284 (83%)
Strand = Plus / Plus
Query: 595 gtctcgacgacgtcgctcatgagcggcctggcctttgggttctggctcaggcagtagaac 654
||||| |||||||||||||| || ||||| ||||||||||| ||||||| ||||||| |
Sbjct: 904897 gtctcaacgacgtcgctcataagaggcctcgcctttgggttttggctcaagcagtagtat 904956
Query: 655 gcgaggctgcaggacttgtgagcggctctggccgagtactgcccctccagcctcgggtcg 714
|| |||||||||| ||||| || ||||| | || ||||| |||||||| | |||||
Sbjct: 904957 gctaggctgcaggctttgtgggcagctctaactgaatactgtccctccagttttgggtca 905016
Query: 715 atgatctggaggagcctcctcttgtcgttgagcttcgggagcgcccagtccaccaggctc 774
||||| ||||| ||||||||||||||||| || ||| |||| |||||||| |||| |||
Sbjct: 905017 atgatttggagaagcctcctcttgtcgttcagtttcaggagggcccagtcaaccaagctg 905076
Query: 775 tgctccctgctgggccgcgacttgtcgatcgacttgcgccccgtcaggagctccagcagg 834
|||||||| |||||||| ||||||||||| ||||| ||||| |||| ||| || || |||
Sbjct: 905077 tgctccctactgggccgtgacttgtcgatggacttacgcccagtcaagagttcaagaagg 905136
Query: 835 accacgccgaagctgtacacgtcactccgagcagtcaagtgacc 878
|| || || |||||||| || ||||| | |||||||||||||||
Sbjct: 905137 acaacaccaaagctgtagacatcacttctagcagtcaagtgacc 905180
Score = 155 bits (78), Expect = 9e-035
Identities = 99/106 (93%)
Strand = Plus / Plus
Query: 1139 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtagacaagcagccgat 1198
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 906520 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtacacaagcagcctgt 906579
Query: 1199 ggtcatcttcgcagcaatatccgatcaacttcaccaaatttggatg 1244
||||||||||||||||||| || |||||||| || |||||||||||
Sbjct: 906580 ggtcatcttcgcagcaatacccaatcaacttgactaaatttggatg 906625
Score = 131 bits (66), Expect = 1e-027
Identities = 108/122 (88%)
Strand = Plus / Plus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccatcacccgtgtcgacacatgc 939
|||||||| |||||||||||||||||||| || ||||||||||||||||| || |||||
Sbjct: 905364 gtcatcacgtattcaggggcagcataaccatatgttcccatcacccgtgttgatacatgg 905423
Query: 940 gtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagtttggcagtataa 999
|| ||||| ||||| |||||| ||||||| || ||||||||||| ||||| |||||||||
Sbjct: 905424 gtttgatcgccttctgggccagcttttgccagaccaaagtcagagagtttagcagtataa 905483
Query: 1000 tc 1001
||
Sbjct: 905484 tc 905485
Score = 93.7 bits (47), Expect = 3e-016
Identities = 113/135 (83%)
Strand = Plus / Plus
Query: 1003 gagtccagcagaatgtttgatgtcttgaaatctctgtagatgacgggcctttgagcgttg 1062
|||||||||||||| ||||||||||||||||| |||||||| | ||||||| ||| |||
Sbjct: 905602 gagtccagcagaatatttgatgtcttgaaatccctgtagataattggcctttcagcattg 905661
Query: 1063 tggaggcaagcgagccctttagcggctcccagcgcgattgacatcctagtaccccagggc 1122
||||||||||| | |||||| || || || | || || |||||||||||| ||||||
Sbjct: 905662 tggaggcaagctaaccctttggcagcccctaatgcaatcgacatcctagtagcccaggat 905721
Query: 1123 aatggcgtagctgtc 1137
| ||| |||||||||
Sbjct: 905722 agtggagtagctgtc 905736
Score = 61.9 bits (31), Expect = 1e-006
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 811 cgccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
|||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 23322078 cgccccgtcaccagctcaagcagcaccacgccgaagctgtacacgtc 23322032
Score = 58.0 bits (29), Expect = 2e-005
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 220 atccaaccgctcttagttcagccttccatttcttgggttaa 260
|||||||| |||||||||||||||| ||||||| |||||||
Sbjct: 904436 atccaaccactcttagttcagcctttcatttctggggttaa 904476
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 823 agctccagcaggaccacgccgaagctgtacacgtc 857
||||| ||||| |||||||||||||||||||||||
Sbjct: 6605420 agctcaagcagcaccacgccgaagctgtacacgtc 6605386
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 825 ctccagcaggaccacgccgaagctgtacacgtcactccg 863
||||||||| | ||||||||||||||||||||| |||||
Sbjct: 5467130 ctccagcagcagcacgccgaagctgtacacgtcgctccg 5467092
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 825 ctccagcaggaccacgccgaagctgtacacgtcactccg 863
||||||||| | ||||||||||||||||||||| |||||
Sbjct: 5465620 ctccagcagcagcacgccgaagctgtacacgtcgctccg 5465582
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 825 ctccagcaggaccacgccgaagctgtacacgtc 857
||||||||| |||| ||||||||||||||||||
Sbjct: 23665292 ctccagcagcaccatgccgaagctgtacacgtc 23665260
Score = 44.1 bits (22), Expect = 0.24
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 825 ctccagcaggaccacgccgaagctgtacac 854
|||||| || ||||||||||||||||||||
Sbjct: 17133454 ctccaggagcaccacgccgaagctgtacac 17133425
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome
shotgun sequence
Length = 22593549
Score = 381 bits (192), Expect = e-103
Identities = 267/292 (91%)
Strand = Plus / Plus
Query: 1275 aagccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcag 1334
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 960955 aagccattctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtag 961014
Query: 1335 tgacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcc 1394
||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 961015 tgacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcccaaaccc 961074
Query: 1395 tccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaa 1454
|||||| |||||||| || ||| ||||||||||| ||||||| ||||| || ||||||||
Sbjct: 961075 tccttcaccaagaacgtagtcagcacggaagctccttgtgatagtctcgagttcaaacaa 961134
Query: 1455 tgtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaactttcctagg 1514
||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 961135 tgtgaagtcaatcacatcattgtatatggagatgttcttggcatcttcaattttcctagg 961194
Query: 1515 tgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 961195 tgttgaaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 961246
Score = 331 bits (167), Expect = 7e-088
Identities = 265/294 (90%), Gaps = 4/294 (1%)
Strand = Plus / Plus
Query: 1275 aagccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcag 1334
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 980619 aagccattctctgtgtccttgatgtccatctttggtgagcaccttgactgcaacaggtag 980678
Query: 1335 tgacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcc 1394
||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 980679 tgacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcccaaaccc 980738
Query: 1395 tccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaa 1454
|||||| |||||||| || ||| |||||||| |||||||||| ||||| || ||||||||
Sbjct: 980739 tccttcaccaagaacgtagtcagcacggaagttctttgtgatggtctcgagttcaaacaa 980798
Query: 1455 tgtgaaggcaatcacat--cgttgtatatggaaatgttcttggcatcttcaactttccta 1512
||||||| ||||||||| || |||||||||| ||||||||||||||||||| |||||||
Sbjct: 980799 tgtgaagtcaatcacataacg-tgtatatggagatgttcttggcatcttcaattttccta 980857
Query: 1513 ggtgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
||||| |||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 980858 ggtgt-taaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 980910
Score = 309 bits (156), Expect = 3e-081
Identities = 262/297 (88%), Gaps = 9/297 (3%)
Strand = Plus / Plus
Query: 1276 agccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcagt 1335
|||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 970301 agccatcctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtagt 970360
Query: 1336 gacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcct 1395
|||||||| |||||||||||||| ||||||||||| ||||||||||| ||| |||| |||
Sbjct: 970361 gacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcacaaaccct 970420
Query: 1396 ccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaat 1455
||||| ||||||| || ||| |||||||||| |||||||| ||||| || |||||||||
Sbjct: 970421 ccttcaccaagaaggtagtcagcacggaagctttttgtgatggtctcaagttcaaacaat 970480
Query: 1456 gtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaac------tttc 1509
||| |||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 970481 ---aagtcaatcacatcgttgtatatggagatgttcttggcatcttcaacttcaattttc 970537
Query: 1510 ctaggtgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
|||||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 970538 ctaggtgttgaaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 970594
Score = 214 bits (108), Expect = 1e-052
Identities = 240/284 (84%)
Strand = Plus / Plus
Query: 595 gtctcgacgacgtcgctcatgagcggcctggcctttgggttctggctcaggcagtagaac 654
||||| |||||||||||||| || ||||| ||||||||||| ||||||| ||||||| |
Sbjct: 958535 gtctcaacgacgtcgctcataagaggcctcgcctttgggttttggctcaagcagtagtat 958594
Query: 655 gcgaggctgcaggacttgtgagcggctctggccgagtactgcccctccagcctcgggtcg 714
|| |||||||||| ||||| || ||||| | || ||||| |||||||| | |||||
Sbjct: 958595 gctaggctgcaggctttgtgggcagctctaactgaatactgtccctccagttttgggtca 958654
Query: 715 atgatctggaggagcctcctcttgtcgttgagcttcgggagcgcccagtccaccaggctc 774
||||| ||||| ||||||||||||||||| ||||||||||| |||||||| |||| |||
Sbjct: 958655 atgatttggagaagcctcctcttgtcgttcagcttcgggagggcccagtcaaccaagcta 958714
Query: 775 tgctccctgctgggccgcgacttgtcgatcgacttgcgccccgtcaggagctccagcagg 834
||||||||||||||||| ||||||||||| ||||| ||||| |||| ||| || || |||
Sbjct: 958715 tgctccctgctgggccgtgacttgtcgatggacttacgcccagtcaagagttcaagaagg 958774
Query: 835 accacgccgaagctgtacacgtcactccgagcagtcaagtgacc 878
|| || || |||||||| || ||||| | |||||||||||||||
Sbjct: 958775 acaacaccaaagctgtagacatcacttctagcagtcaagtgacc 958818
Score = 155 bits (78), Expect = 9e-035
Identities = 99/106 (93%)
Strand = Plus / Plus
Query: 1139 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtagacaagcagccgat 1198
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 960114 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtacacaagcagcctgt 960173
Query: 1199 ggtcatcttcgcagcaatatccgatcaacttcaccaaatttggatg 1244
||||||||||||||||||| || |||||||| || |||||||||||
Sbjct: 960174 ggtcatcttcgcagcaatacccaatcaacttgactaaatttggatg 960219
Score = 131 bits (66), Expect = 1e-027
Identities = 108/122 (88%)
Strand = Plus / Plus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccatcacccgtgtcgacacatgc 939
||||||||||||||||||||||||||||| || |||||||||||||| || || |||||
Sbjct: 958988 gtcatcacatattcaggggcagcataaccatatgttcccatcacccgagttgatacatgg 959047
Query: 940 gtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagtttggcagtataa 999
|| ||||| ||||| |||||| ||||||| || ||||||||||| ||||| |||||||||
Sbjct: 959048 gtttgatcgccttctgggccagcttttgccagaccaaagtcagagagtttagcagtataa 959107
Query: 1000 tc 1001
||
Sbjct: 959108 tc 959109
Score = 95.6 bits (48), Expect = 7e-017
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 1003 gagtccagcagaatgtttgatgtcttgaaatctctgtagatgacgggcctttgagcgttg 1062
|||||||||||||| ||||||||||||||||| |||||||| | ||||||| ||| |||
Sbjct: 959227 gagtccagcagaatatttgatgtcttgaaatccctgtagataattggcctttcagcattg 959286
Query: 1063 tggaggcaagcgagccctttagcggctcccagcgcgattgacatcctagtacccca 1118
||||||||||| | |||||| || ||||| | || || |||||||||||| ||||
Sbjct: 959287 tggaggcaagctaaccctttggcagctcctaatgcaatcgacatcctagtagccca 959342
Score = 56.0 bits (28), Expect = 6e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 822 gagctccagcaggaccacgccgaagctgtacacgtc 857
|||||||||||| || ||||||||||||||||||||
Sbjct: 6501367 gagctccagcagcacgacgccgaagctgtacacgtc 6501402
Score = 48.1 bits (24), Expect = 0.015
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 822 gagctccagcaggaccacgccgaagctgtacacgtc 857
|||||| ||||| || ||||||||||||||||||||
Sbjct: 6511723 gagctcgagcagcacgacgccgaagctgtacacgtc 6511758
Score = 48.1 bits (24), Expect = 0.015
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 822 gagctccagcaggaccacgccgaagctgtacacgtc 857
||||||||| || ||||| |||||||||||||||||
Sbjct: 6069628 gagctccaggagcaccaccccgaagctgtacacgtc 6069663
Score = 48.1 bits (24), Expect = 0.015
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 229 ctcttagttcagccttccatttcttgggttaa 260
|||||||||||||||| ||||||| |||||||
Sbjct: 958078 ctcttagttcagcctttcatttctggggttaa 958109
Score = 46.1 bits (23), Expect = 0.061
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 20 aagcaaagcaaagcaaagcaggc 42
|||||||||||||||||||||||
Sbjct: 18452156 aagcaaagcaaagcaaagcaggc 18452134
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
complete sequence
Length = 28386948
Score = 381 bits (192), Expect = e-103
Identities = 267/292 (91%)
Strand = Plus / Plus
Query: 1275 aagccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcag 1334
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 951042 aagccattctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtag 951101
Query: 1335 tgacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcc 1394
||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 951102 tgacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcccaaaccc 951161
Query: 1395 tccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaa 1454
|||||| |||||||| || ||| ||||||||||| ||||||| ||||| || ||||||||
Sbjct: 951162 tccttcaccaagaacgtagtcagcacggaagctccttgtgatagtctcgagttcaaacaa 951221
Query: 1455 tgtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaactttcctagg 1514
||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 951222 tgtgaagtcaatcacatcattgtatatggagatgttcttggcatcttcaattttcctagg 951281
Query: 1515 tgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 951282 tgttgaaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 951333
Score = 331 bits (167), Expect = 7e-088
Identities = 265/294 (90%), Gaps = 4/294 (1%)
Strand = Plus / Plus
Query: 1275 aagccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcag 1334
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 970710 aagccattctctgtgtccttgatgtccatctttggtgagcaccttgactgcaacaggtag 970769
Query: 1335 tgacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcc 1394
||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 970770 tgacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcccaaaccc 970829
Query: 1395 tccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaa 1454
|||||| |||||||| || ||| |||||||| |||||||||| ||||| || ||||||||
Sbjct: 970830 tccttcaccaagaacgtagtcagcacggaagttctttgtgatggtctcgagttcaaacaa 970889
Query: 1455 tgtgaaggcaatcacat--cgttgtatatggaaatgttcttggcatcttcaactttccta 1512
||||||| ||||||||| || |||||||||| ||||||||||||||||||| |||||||
Sbjct: 970890 tgtgaagtcaatcacataacg-tgtatatggagatgttcttggcatcttcaattttccta 970948
Query: 1513 ggtgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
||||| |||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 970949 ggtgt-taaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 971001
Score = 309 bits (156), Expect = 3e-081
Identities = 262/297 (88%), Gaps = 9/297 (3%)
Strand = Plus / Plus
Query: 1276 agccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcagt 1335
|||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 960392 agccatcctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtagt 960451
Query: 1336 gacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcct 1395
|||||||| |||||||||||||| ||||||||||| ||||||||||| ||| |||| |||
Sbjct: 960452 gacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcacaaaccct 960511
Query: 1396 ccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaat 1455
||||| ||||||| || ||| |||||||||| |||||||| ||||| || |||||||||
Sbjct: 960512 ccttcaccaagaaggtagtcagcacggaagctttttgtgatggtctcaagttcaaacaat 960571
Query: 1456 gtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaac------tttc 1509
||| |||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 960572 ---aagtcaatcacatcgttgtatatggagatgttcttggcatcttcaacttcaattttc 960628
Query: 1510 ctaggtgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
|||||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 960629 ctaggtgttgaaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 960685
Score = 214 bits (108), Expect = 1e-052
Identities = 240/284 (84%)
Strand = Plus / Plus
Query: 595 gtctcgacgacgtcgctcatgagcggcctggcctttgggttctggctcaggcagtagaac 654
||||| |||||||||||||| || ||||| ||||||||||| ||||||| ||||||| |
Sbjct: 948622 gtctcaacgacgtcgctcataagaggcctcgcctttgggttttggctcaagcagtagtat 948681
Query: 655 gcgaggctgcaggacttgtgagcggctctggccgagtactgcccctccagcctcgggtcg 714
|| |||||||||| ||||| || ||||| | || ||||| |||||||| | |||||
Sbjct: 948682 gctaggctgcaggctttgtgggcagctctaactgaatactgtccctccagttttgggtca 948741
Query: 715 atgatctggaggagcctcctcttgtcgttgagcttcgggagcgcccagtccaccaggctc 774
||||| ||||| ||||||||||||||||| ||||||||||| |||||||| |||| |||
Sbjct: 948742 atgatttggagaagcctcctcttgtcgttcagcttcgggagggcccagtcaaccaagcta 948801
Query: 775 tgctccctgctgggccgcgacttgtcgatcgacttgcgccccgtcaggagctccagcagg 834
||||||||||||||||| ||||||||||| ||||| ||||| |||| ||| || || |||
Sbjct: 948802 tgctccctgctgggccgtgacttgtcgatggacttacgcccagtcaagagttcaagaagg 948861
Query: 835 accacgccgaagctgtacacgtcactccgagcagtcaagtgacc 878
|| || || |||||||| || ||||| | |||||||||||||||
Sbjct: 948862 acaacaccaaagctgtagacatcacttctagcagtcaagtgacc 948905
Score = 155 bits (78), Expect = 9e-035
Identities = 99/106 (93%)
Strand = Plus / Plus
Query: 1139 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtagacaagcagccgat 1198
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 950201 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtacacaagcagcctgt 950260
Query: 1199 ggtcatcttcgcagcaatatccgatcaacttcaccaaatttggatg 1244
||||||||||||||||||| || |||||||| || |||||||||||
Sbjct: 950261 ggtcatcttcgcagcaatacccaatcaacttgactaaatttggatg 950306
Score = 131 bits (66), Expect = 1e-027
Identities = 108/122 (88%)
Strand = Plus / Plus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccatcacccgtgtcgacacatgc 939
||||||||||||||||||||||||||||| || |||||||||||||| || || |||||
Sbjct: 949075 gtcatcacatattcaggggcagcataaccatatgttcccatcacccgagttgatacatgg 949134
Query: 940 gtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagtttggcagtataa 999
|| ||||| ||||| |||||| ||||||| || ||||||||||| ||||| |||||||||
Sbjct: 949135 gtttgatcgccttctgggccagcttttgccagaccaaagtcagagagtttagcagtataa 949194
Query: 1000 tc 1001
||
Sbjct: 949195 tc 949196
Score = 95.6 bits (48), Expect = 7e-017
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 1003 gagtccagcagaatgtttgatgtcttgaaatctctgtagatgacgggcctttgagcgttg 1062
|||||||||||||| ||||||||||||||||| |||||||| | ||||||| ||| |||
Sbjct: 949314 gagtccagcagaatatttgatgtcttgaaatccctgtagataattggcctttcagcattg 949373
Query: 1063 tggaggcaagcgagccctttagcggctcccagcgcgattgacatcctagtacccca 1118
||||||||||| | |||||| || ||||| | || || |||||||||||| ||||
Sbjct: 949374 tggaggcaagctaaccctttggcagctcctaatgcaatcgacatcctagtagccca 949429
Score = 56.0 bits (28), Expect = 6e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 822 gagctccagcaggaccacgccgaagctgtacacgtc 857
|||||||||||| || ||||||||||||||||||||
Sbjct: 6934340 gagctccagcagcacgacgccgaagctgtacacgtc 6934375
Score = 48.1 bits (24), Expect = 0.015
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 822 gagctccagcaggaccacgccgaagctgtacacgtc 857
||||||||| || ||||| |||||||||||||||||
Sbjct: 6305447 gagctccaggagcaccaccccgaagctgtacacgtc 6305482
Score = 48.1 bits (24), Expect = 0.015
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 229 ctcttagttcagccttccatttcttgggttaa 260
|||||||||||||||| ||||||| |||||||
Sbjct: 948165 ctcttagttcagcctttcatttctggggttaa 948196
Score = 46.1 bits (23), Expect = 0.061
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 aagcaaagcaaagcaaagcaggc 42
|||||||||||||||||||||||
Sbjct: 22318009 aagcaaagcaaagcaaagcaggc 22318031
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
complete sequence
Length = 27566993
Score = 381 bits (192), Expect = e-103
Identities = 267/292 (91%)
Strand = Plus / Plus
Query: 1275 aagccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcag 1334
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 993417 aagccattctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtag 993476
Query: 1335 tgacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcc 1394
||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 993477 tgacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcccaaaccc 993536
Query: 1395 tccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaa 1454
|||||| |||||||| || ||| ||||||||||||||||||| ||||| || ||||||||
Sbjct: 993537 tccttcaccaagaacgtagtcagcacggaagctctttgtgatggtctcgagttcaaacaa 993596
Query: 1455 tgtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaactttcctagg 1514
|||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 993597 tgtgaaatcaatcacatcgttgtatatggagatgttcttggcatcttcaattttcctagg 993656
Query: 1515 tgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
||| ||||| ||||| ||||||||||| |||| ||| |||||||| ||||||
Sbjct: 993657 tgttgaaggatcactcatatctgatgagatgcgggtatgcttcctctctgca 993708
Score = 190 bits (96), Expect = 2e-045
Identities = 237/284 (83%)
Strand = Plus / Plus
Query: 595 gtctcgacgacgtcgctcatgagcggcctggcctttgggttctggctcaggcagtagaac 654
||||| |||||||||||||| || ||||| ||||||||||| ||||||| ||||||| |
Sbjct: 991005 gtctcaacgacgtcgctcataagaggcctcgcctttgggttttggctcaagcagtagtat 991064
Query: 655 gcgaggctgcaggacttgtgagcggctctggccgagtactgcccctccagcctcgggtcg 714
|| |||||||||| ||||| || ||||| | || ||||| |||||||| | |||||
Sbjct: 991065 gctaggctgcaggctttgtgggcagctctaactgaatactgtccctccagttttgggtca 991124
Query: 715 atgatctggaggagcctcctcttgtcgttgagcttcgggagcgcccagtccaccaggctc 774
||||| ||||| ||||||||||||||||| || ||| |||| |||||||| |||| |||
Sbjct: 991125 atgatttggagaagcctcctcttgtcgttcagtttcaggagggcccagtcaaccaagctg 991184
Query: 775 tgctccctgctgggccgcgacttgtcgatcgacttgcgccccgtcaggagctccagcagg 834
|||||||| |||||||| ||||||||||| ||||| ||||| |||| ||| || || |||
Sbjct: 991185 tgctccctactgggccgtgacttgtcgatggacttacgcccagtcaagagttcaagaagg 991244
Query: 835 accacgccgaagctgtacacgtcactccgagcagtcaagtgacc 878
|| || || |||||||| || ||||| | |||||||||||||||
Sbjct: 991245 acaacaccaaagctgtagacatcacttctagcagtcaagtgacc 991288
Score = 155 bits (78), Expect = 9e-035
Identities = 99/106 (93%)
Strand = Plus / Plus
Query: 1139 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtagacaagcagccgat 1198
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 992628 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtacacaagcagcctgt 992687
Query: 1199 ggtcatcttcgcagcaatatccgatcaacttcaccaaatttggatg 1244
||||||||||||||||||| || |||||||| || |||||||||||
Sbjct: 992688 ggtcatcttcgcagcaatacccaatcaacttgactaaatttggatg 992733
Score = 131 bits (66), Expect = 1e-027
Identities = 108/122 (88%)
Strand = Plus / Plus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccatcacccgtgtcgacacatgc 939
|||||||| |||||||||||||||||||| || ||||||||||||||||| || |||||
Sbjct: 991472 gtcatcacgtattcaggggcagcataaccatatgttcccatcacccgtgttgatacatgg 991531
Query: 940 gtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagtttggcagtataa 999
|| ||||| ||||| |||||| ||||||| || ||||||||||| ||||| |||||||||
Sbjct: 991532 gtttgatcgccttctgggccagcttttgccagaccaaagtcagagagtttagcagtataa 991591
Query: 1000 tc 1001
||
Sbjct: 991592 tc 991593
Score = 93.7 bits (47), Expect = 3e-016
Identities = 113/135 (83%)
Strand = Plus / Plus
Query: 1003 gagtccagcagaatgtttgatgtcttgaaatctctgtagatgacgggcctttgagcgttg 1062
|||||||||||||| ||||||||||||||||| |||||||| | ||||||| ||| |||
Sbjct: 991710 gagtccagcagaatatttgatgtcttgaaatccctgtagataattggcctttcagcattg 991769
Query: 1063 tggaggcaagcgagccctttagcggctcccagcgcgattgacatcctagtaccccagggc 1122
||||||||||| | |||||| || || || | || || |||||||||||| ||||||
Sbjct: 991770 tggaggcaagctaaccctttggcagcccctaatgcaatcgacatcctagtagcccaggat 991829
Query: 1123 aatggcgtagctgtc 1137
| ||| |||||||||
Sbjct: 991830 agtggagtagctgtc 991844
Score = 61.9 bits (31), Expect = 1e-006
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 811 cgccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
|||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 27148004 cgccccgtcaccagctcaagcagcaccacgccgaagctgtacacgtc 27147958
Score = 58.0 bits (29), Expect = 2e-005
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 220 atccaaccgctcttagttcagccttccatttcttgggttaa 260
|||||||| |||||||||||||||| ||||||| |||||||
Sbjct: 990544 atccaaccactcttagttcagcctttcatttctggggttaa 990584
Score = 56.0 bits (28), Expect = 6e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 810 gcgccccgtcaggagctccagcaggaccacgccgaa 845
|||||||||||||||||||| ||| |||||||||||
Sbjct: 7426002 gcgccccgtcaggagctccatcagcaccacgccgaa 7425967
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 825 ctccagcaggaccacgccgaagctgtacacgtcactccg 863
||||||||| | ||||||||||||||||||||| |||||
Sbjct: 5771643 ctccagcagcagcacgccgaagctgtacacgtcgctccg 5771605
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 825 ctccagcaggaccacgccgaagctgtacacgtc 857
||||||||| |||| ||||||||||||||||||
Sbjct: 27512848 ctccagcagcaccatgccgaagctgtacacgtc 27512816
Score = 44.1 bits (22), Expect = 0.24
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 832 aggaccacgccgaagctgtacacgtc 857
||||| ||||||||||||||||||||
Sbjct: 25756730 aggacgacgccgaagctgtacacgtc 25756755
Score = 44.1 bits (22), Expect = 0.24
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 825 ctccagcaggaccacgccgaagctgtacac 854
|||||| || ||||||||||||||||||||
Sbjct: 20840948 ctccaggagcaccacgccgaagctgtacac 20840919
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 381 bits (192), Expect = e-103
Identities = 267/292 (91%)
Strand = Plus / Plus
Query: 1275 aagccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcag 1334
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 949467 aagccattctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtag 949526
Query: 1335 tgacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcc 1394
||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 949527 tgacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcccaaaccc 949586
Query: 1395 tccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaa 1454
|||||| |||||||| || ||| ||||||||||| ||||||| ||||| || ||||||||
Sbjct: 949587 tccttcaccaagaacgtagtcagcacggaagctccttgtgatagtctcgagttcaaacaa 949646
Query: 1455 tgtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaactttcctagg 1514
||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 949647 tgtgaagtcaatcacatcattgtatatggagatgttcttggcatcttcaattttcctagg 949706
Query: 1515 tgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 949707 tgttgaaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 949758
Score = 331 bits (167), Expect = 7e-088
Identities = 265/294 (90%), Gaps = 4/294 (1%)
Strand = Plus / Plus
Query: 1275 aagccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcag 1334
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 969162 aagccattctctgtgtccttgatgtccatctttggtgagcaccttgactgcaacaggtag 969221
Query: 1335 tgacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcc 1394
||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 969222 tgacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcccaaaccc 969281
Query: 1395 tccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaa 1454
|||||| |||||||| || ||| |||||||| |||||||||| ||||| || ||||||||
Sbjct: 969282 tccttcaccaagaacgtagtcagcacggaagttctttgtgatggtctcgagttcaaacaa 969341
Query: 1455 tgtgaaggcaatcacat--cgttgtatatggaaatgttcttggcatcttcaactttccta 1512
||||||| ||||||||| || |||||||||| ||||||||||||||||||| |||||||
Sbjct: 969342 tgtgaagtcaatcacataacg-tgtatatggagatgttcttggcatcttcaattttccta 969400
Query: 1513 ggtgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
||||| |||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 969401 ggtgt-taaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 969453
Score = 309 bits (156), Expect = 3e-081
Identities = 262/297 (88%), Gaps = 9/297 (3%)
Strand = Plus / Plus
Query: 1276 agccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcagt 1335
|||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 958844 agccatcctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtagt 958903
Query: 1336 gacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcct 1395
|||||||| |||||||||||||| ||||||||||| ||||||||||| ||| |||| |||
Sbjct: 958904 gacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcacaaaccct 958963
Query: 1396 ccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaat 1455
||||| ||||||| || ||| |||||||||| |||||||| ||||| || |||||||||
Sbjct: 958964 ccttcaccaagaaggtagtcagcacggaagctttttgtgatggtctcaagttcaaacaat 959023
Query: 1456 gtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaac------tttc 1509
||| |||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 959024 ---aagtcaatcacatcgttgtatatggagatgttcttggcatcttcaacttcaattttc 959080
Query: 1510 ctaggtgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
|||||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 959081 ctaggtgttgaaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 959137
Score = 214 bits (108), Expect = 1e-052
Identities = 240/284 (84%)
Strand = Plus / Plus
Query: 595 gtctcgacgacgtcgctcatgagcggcctggcctttgggttctggctcaggcagtagaac 654
||||| |||||||||||||| || ||||| ||||||||||| ||||||| ||||||| |
Sbjct: 947047 gtctcaacgacgtcgctcataagaggcctcgcctttgggttttggctcaagcagtagtat 947106
Query: 655 gcgaggctgcaggacttgtgagcggctctggccgagtactgcccctccagcctcgggtcg 714
|| |||||||||| ||||| || ||||| | || ||||| |||||||| | |||||
Sbjct: 947107 gctaggctgcaggctttgtgggcagctctaactgaatactgtccctccagttttgggtca 947166
Query: 715 atgatctggaggagcctcctcttgtcgttgagcttcgggagcgcccagtccaccaggctc 774
||||| ||||| ||||||||||||||||| ||||||||||| |||||||| |||| |||
Sbjct: 947167 atgatttggagaagcctcctcttgtcgttcagcttcgggagggcccagtcaaccaagcta 947226
Query: 775 tgctccctgctgggccgcgacttgtcgatcgacttgcgccccgtcaggagctccagcagg 834
||||||||||||||||| ||||||||||| ||||| ||||| |||| ||| || || |||
Sbjct: 947227 tgctccctgctgggccgtgacttgtcgatggacttacgcccagtcaagagttcaagaagg 947286
Query: 835 accacgccgaagctgtacacgtcactccgagcagtcaagtgacc 878
|| || || |||||||| || ||||| | |||||||||||||||
Sbjct: 947287 acaacaccaaagctgtagacatcacttctagcagtcaagtgacc 947330
Score = 155 bits (78), Expect = 9e-035
Identities = 99/106 (93%)
Strand = Plus / Plus
Query: 1139 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtagacaagcagccgat 1198
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 948626 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtacacaagcagcctgt 948685
Query: 1199 ggtcatcttcgcagcaatatccgatcaacttcaccaaatttggatg 1244
||||||||||||||||||| || |||||||| || |||||||||||
Sbjct: 948686 ggtcatcttcgcagcaatacccaatcaacttgactaaatttggatg 948731
Score = 131 bits (66), Expect = 1e-027
Identities = 108/122 (88%)
Strand = Plus / Plus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccatcacccgtgtcgacacatgc 939
||||||||||||||||||||||||||||| || |||||||||||||| || || |||||
Sbjct: 947500 gtcatcacatattcaggggcagcataaccatatgttcccatcacccgagttgatacatgg 947559
Query: 940 gtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagtttggcagtataa 999
|| ||||| ||||| |||||| ||||||| || ||||||||||| ||||| |||||||||
Sbjct: 947560 gtttgatcgccttctgggccagcttttgccagaccaaagtcagagagtttagcagtataa 947619
Query: 1000 tc 1001
||
Sbjct: 947620 tc 947621
Score = 95.6 bits (48), Expect = 7e-017
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 1003 gagtccagcagaatgtttgatgtcttgaaatctctgtagatgacgggcctttgagcgttg 1062
|||||||||||||| ||||||||||||||||| |||||||| | ||||||| ||| |||
Sbjct: 947739 gagtccagcagaatatttgatgtcttgaaatccctgtagataattggcctttcagcattg 947798
Query: 1063 tggaggcaagcgagccctttagcggctcccagcgcgattgacatcctagtacccca 1118
||||||||||| | |||||| || ||||| | || || |||||||||||| ||||
Sbjct: 947799 tggaggcaagctaaccctttggcagctcctaatgcaatcgacatcctagtagccca 947854
Score = 56.0 bits (28), Expect = 6e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 822 gagctccagcaggaccacgccgaagctgtacacgtc 857
|||||||||||| || ||||||||||||||||||||
Sbjct: 7000807 gagctccagcagcacgacgccgaagctgtacacgtc 7000842
Score = 48.1 bits (24), Expect = 0.015
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 822 gagctccagcaggaccacgccgaagctgtacacgtc 857
||||||||| || ||||| |||||||||||||||||
Sbjct: 6371914 gagctccaggagcaccaccccgaagctgtacacgtc 6371949
Score = 48.1 bits (24), Expect = 0.015
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 229 ctcttagttcagccttccatttcttgggttaa 260
|||||||||||||||| ||||||| |||||||
Sbjct: 946590 ctcttagttcagcctttcatttctggggttaa 946621
Score = 46.1 bits (23), Expect = 0.061
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 aagcaaagcaaagcaaagcaggc 42
|||||||||||||||||||||||
Sbjct: 22627920 aagcaaagcaaagcaaagcaggc 22627942
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 381 bits (192), Expect = e-103
Identities = 267/292 (91%)
Strand = Plus / Plus
Query: 1275 aagccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcag 1334
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 993417 aagccattctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtag 993476
Query: 1335 tgacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcc 1394
||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 993477 tgacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcccaaaccc 993536
Query: 1395 tccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaa 1454
|||||| |||||||| || ||| ||||||||||||||||||| ||||| || ||||||||
Sbjct: 993537 tccttcaccaagaacgtagtcagcacggaagctctttgtgatggtctcgagttcaaacaa 993596
Query: 1455 tgtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaactttcctagg 1514
|||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 993597 tgtgaaatcaatcacatcgttgtatatggagatgttcttggcatcttcaattttcctagg 993656
Query: 1515 tgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
||| ||||| ||||| ||||||||||| |||| ||| |||||||| ||||||
Sbjct: 993657 tgttgaaggatcactcatatctgatgagatgcgggtatgcttcctctctgca 993708
Score = 190 bits (96), Expect = 2e-045
Identities = 237/284 (83%)
Strand = Plus / Plus
Query: 595 gtctcgacgacgtcgctcatgagcggcctggcctttgggttctggctcaggcagtagaac 654
||||| |||||||||||||| || ||||| ||||||||||| ||||||| ||||||| |
Sbjct: 991005 gtctcaacgacgtcgctcataagaggcctcgcctttgggttttggctcaagcagtagtat 991064
Query: 655 gcgaggctgcaggacttgtgagcggctctggccgagtactgcccctccagcctcgggtcg 714
|| |||||||||| ||||| || ||||| | || ||||| |||||||| | |||||
Sbjct: 991065 gctaggctgcaggctttgtgggcagctctaactgaatactgtccctccagttttgggtca 991124
Query: 715 atgatctggaggagcctcctcttgtcgttgagcttcgggagcgcccagtccaccaggctc 774
||||| ||||| ||||||||||||||||| || ||| |||| |||||||| |||| |||
Sbjct: 991125 atgatttggagaagcctcctcttgtcgttcagtttcaggagggcccagtcaaccaagctg 991184
Query: 775 tgctccctgctgggccgcgacttgtcgatcgacttgcgccccgtcaggagctccagcagg 834
|||||||| |||||||| ||||||||||| ||||| ||||| |||| ||| || || |||
Sbjct: 991185 tgctccctactgggccgtgacttgtcgatggacttacgcccagtcaagagttcaagaagg 991244
Query: 835 accacgccgaagctgtacacgtcactccgagcagtcaagtgacc 878
|| || || |||||||| || ||||| | |||||||||||||||
Sbjct: 991245 acaacaccaaagctgtagacatcacttctagcagtcaagtgacc 991288
Score = 155 bits (78), Expect = 9e-035
Identities = 99/106 (93%)
Strand = Plus / Plus
Query: 1139 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtagacaagcagccgat 1198
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 992628 ttcggaataagtggttttctagacttcctcgaaacatgaactcgtacacaagcagcctgt 992687
Query: 1199 ggtcatcttcgcagcaatatccgatcaacttcaccaaatttggatg 1244
||||||||||||||||||| || |||||||| || |||||||||||
Sbjct: 992688 ggtcatcttcgcagcaatacccaatcaacttgactaaatttggatg 992733
Score = 131 bits (66), Expect = 1e-027
Identities = 108/122 (88%)
Strand = Plus / Plus
Query: 880 gtcatcacatattcaggggcagcataaccgtaggttcccatcacccgtgtcgacacatgc 939
|||||||| |||||||||||||||||||| || ||||||||||||||||| || |||||
Sbjct: 991472 gtcatcacgtattcaggggcagcataaccatatgttcccatcacccgtgttgatacatgg 991531
Query: 940 gtctgatcaccttcagggccatcttttgcgaggccaaagtcagacagtttggcagtataa 999
|| ||||| ||||| |||||| ||||||| || ||||||||||| ||||| |||||||||
Sbjct: 991532 gtttgatcgccttctgggccagcttttgccagaccaaagtcagagagtttagcagtataa 991591
Query: 1000 tc 1001
||
Sbjct: 991592 tc 991593
Score = 93.7 bits (47), Expect = 3e-016
Identities = 113/135 (83%)
Strand = Plus / Plus
Query: 1003 gagtccagcagaatgtttgatgtcttgaaatctctgtagatgacgggcctttgagcgttg 1062
|||||||||||||| ||||||||||||||||| |||||||| | ||||||| ||| |||
Sbjct: 991710 gagtccagcagaatatttgatgtcttgaaatccctgtagataattggcctttcagcattg 991769
Query: 1063 tggaggcaagcgagccctttagcggctcccagcgcgattgacatcctagtaccccagggc 1122
||||||||||| | |||||| || || || | || || |||||||||||| ||||||
Sbjct: 991770 tggaggcaagctaaccctttggcagcccctaatgcaatcgacatcctagtagcccaggat 991829
Query: 1123 aatggcgtagctgtc 1137
| ||| |||||||||
Sbjct: 991830 agtggagtagctgtc 991844
Score = 61.9 bits (31), Expect = 1e-006
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 811 cgccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
|||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 27073601 cgccccgtcaccagctcaagcagcaccacgccgaagctgtacacgtc 27073555
Score = 58.0 bits (29), Expect = 2e-005
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 220 atccaaccgctcttagttcagccttccatttcttgggttaa 260
|||||||| |||||||||||||||| ||||||| |||||||
Sbjct: 990544 atccaaccactcttagttcagcctttcatttctggggttaa 990584
Score = 56.0 bits (28), Expect = 6e-005
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 810 gcgccccgtcaggagctccagcaggaccacgccgaa 845
|||||||||||||||||||| ||| |||||||||||
Sbjct: 7425881 gcgccccgtcaggagctccatcagcaccacgccgaa 7425846
Score = 54.0 bits (27), Expect = 2e-004
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 825 ctccagcaggaccacgccgaagctgtacacgtcactccg 863
||||||||| | ||||||||||||||||||||| |||||
Sbjct: 5771636 ctccagcagcagcacgccgaagctgtacacgtcgctccg 5771598
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 825 ctccagcaggaccacgccgaagctgtacacgtc 857
||||||||| |||| ||||||||||||||||||
Sbjct: 27438406 ctccagcagcaccatgccgaagctgtacacgtc 27438374
Score = 44.1 bits (22), Expect = 0.24
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 832 aggaccacgccgaagctgtacacgtc 857
||||| ||||||||||||||||||||
Sbjct: 25684906 aggacgacgccgaagctgtacacgtc 25684931
Score = 44.1 bits (22), Expect = 0.24
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 825 ctccagcaggaccacgccgaagctgtacac 854
|||||| || ||||||||||||||||||||
Sbjct: 20767162 ctccaggagcaccacgccgaagctgtacac 20767133
>gb|C22423.1|C22423 C22423 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C52856_2A, mRNA sequence
Length = 448
Score = 329 bits (166), Expect = 3e-087
Identities = 365/430 (84%), Gaps = 1/430 (0%)
Strand = Plus / Minus
Query: 709 gggtcgatgatctggaggagcctcctcttgtcgttgagcttcgggagcgcccagtccacc 768
||||| ||||| ||||| ||||||||||||||||| || ||| |||| |||||||| |||
Sbjct: 436 gggtcaatgatttggagaagcctcctcttgtcgttcagtttcaggagggcccagtcaacc 377
Query: 769 aggctctgctccctgctgggccgcgacttgtcgatcgacttgcgccccgt-caggagctc 827
| ||| |||||||| |||||||| ||||||||||| ||||| ||||| || || ||| ||
Sbjct: 376 aagctgtgctccctactgggccgtgacttgtcgatggacttacgcccagttcaagagttc 317
Query: 828 cagcaggaccacgccgaagctgtacacgtcactccgagcagtcaagtgaccggtcatcac 887
|| ||||| || || |||||||| || ||||| | ||||||||||||||| ||||||||
Sbjct: 316 aagaaggacaacaccaaagctgtagacatcacttctagcagtcaagtgaccagtcatcac 257
Query: 888 atattcaggggcagcataaccgtaggttcccatcacccgtgtcgacacatgcgtctgatc 947
|||||||||||||||||||| || ||||||||||||||||| || ||||| || |||||
Sbjct: 256 gtattcaggggcagcataaccatatgttcccatcacccgtgttgatacatgggtttgatc 197
Query: 948 accttcagggccatcttttgcgaggccaaagtcagacagtttggcagtataatcggagtc 1007
||||| |||||| ||||||| || ||||||||||| ||||| ||||||||||| |||||
Sbjct: 196 gccttctgggccagcttttgccagaccaaagtcagagagtttagcagtataatctgagtc 137
Query: 1008 cagcagaatgtttgatgtcttgaaatctctgtagatgacgggcctttgagcgttgtggag 1067
||||||||| ||||||||||||||||| |||||||| | ||||||| ||| ||||||||
Sbjct: 136 cagcagaatatttgatgtcttgaaatccctgtagataattggcctttcagcattgtggag 77
Query: 1068 gcaagcgagccctttagcggctcccagcgcgattgacatcctagtaccccagggcaatgg 1127
|||||| | |||||| || || || | || || |||||||||||| |||||| | |||
Sbjct: 76 gcaagctaaccctttggcagcccctaatgcaatcgacatcctagtagcccaggatagtgg 17
Query: 1128 cgtagctgtc 1137
|||||||||
Sbjct: 16 agtagctgtc 7
>gb|CV733989.1|CV733989 FLO--09-C13.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--09-C13,
mRNA sequence
Length = 557
Score = 309 bits (156), Expect = 3e-081
Identities = 262/297 (88%), Gaps = 9/297 (3%)
Strand = Plus / Minus
Query: 1276 agccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcagt 1335
|||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 501 agccatcctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtagt 442
Query: 1336 gacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcct 1395
|||||||| |||||||||||||| ||||||||||| ||||||||||| ||| |||| |||
Sbjct: 441 gacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcacaaaccct 382
Query: 1396 ccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaat 1455
||||| ||||||| || ||| |||||||||| |||||||| ||||| || |||||||||
Sbjct: 381 ccttcaccaagaaggtagtcagcacggaagctttttgtgatggtctcaagttcaaacaat 322
Query: 1456 gtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaac------tttc 1509
||| |||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 321 ---aagtcaatcacatcgttgtatatggagatgttcttggcatcttcaacttcaattttc 265
Query: 1510 ctaggtgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
|||||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 264 ctaggtgttgaaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 208
>dbj|AK102976.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115M19, full
insert sequence
Length = 634
Score = 309 bits (156), Expect = 3e-081
Identities = 262/297 (88%), Gaps = 9/297 (3%)
Strand = Plus / Minus
Query: 1276 agccattctctgtgcccttgatgtccatctttgttgagcaccttgactgcaacaggcagt 1335
|||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 433 agccatcctctgtgtccttgatgtccatctttgttgagcaccttgactgcaacaggtagt 374
Query: 1336 gacttcagcccaaccctgacattttcatctatgtaacccttgtaaacggtcccaaatcct 1395
|||||||| |||||||||||||| ||||||||||| ||||||||||| ||| |||| |||
Sbjct: 373 gacttcagaccaaccctgacattctcatctatgtagcccttgtaaacagtcacaaaccct 314
Query: 1396 ccttcgccaagaacataatcaacacggaagctctttgtgattgtctctagctcaaacaat 1455
||||| ||||||| || ||| |||||||||| |||||||| ||||| || |||||||||
Sbjct: 313 ccttcaccaagaaggtagtcagcacggaagctttttgtgatggtctcaagttcaaacaat 254
Query: 1456 gtgaaggcaatcacatcgttgtatatggaaatgttcttggcatcttcaac------tttc 1509
||| |||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 253 ---aagtcaatcacatcgttgtatatggagatgttcttggcatcttcaacttcaattttc 197
Query: 1510 ctaggtgtggaagggtcacttatatctgatgacatgcaggtgtgcttcctatctgca 1566
|||||||| ||||| ||||| ||||||||||| |||| |||||||||||| ||||||
Sbjct: 196 ctaggtgttgaaggatcactcatatctgatgagatgcgggtgtgcttcctctctgca 140
>gb|C22549.1|C22549 C22549 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E12066_3Z, mRNA sequence
Length = 472
Score = 79.8 bits (40), Expect = 4e-012
Identities = 84/96 (87%), Gaps = 2/96 (2%)
Strand = Plus / Minus
Query: 763 tccaccaggctctgctccctgctgggccgcgacttgtcgatcgacttgc-gccccgtcag 821
||||| ||||||||||||||| | ||||||| |||||||| || | || ||||||||||
Sbjct: 371 tccacgaggctctgctccctgttcggccgcgtcttgtcga-cggcgcgccgccccgtcag 313
Query: 822 gagctccagcaggaccacgccgaagctgtacacgtc 857
|| |||||| || |||||||||||||||||||||||
Sbjct: 312 gatctccaggagcaccacgccgaagctgtacacgtc 277
>dbj|AP003814.1| Oryza sativa (japonica cultivar-group) chromosome 7 clone OJ1154_D08,
*** SEQUENCING IN PROGRESS ***
Length = 108287
Score = 79.8 bits (40), Expect = 4e-012
Identities = 84/96 (87%), Gaps = 2/96 (2%)
Strand = Plus / Plus
Query: 763 tccaccaggctctgctccctgctgggccgcgacttgtcgatcgacttgc-gccccgtcag 821
||||| ||||||||||||||| | ||||||| |||||||| || | || ||||||||||
Sbjct: 56705 tccacgaggctctgctccctgttcggccgcgtcttgtcga-cggcgcgccgccccgtcag 56763
Query: 822 gagctccagcaggaccacgccgaagctgtacacgtc 857
|| |||||| || |||||||||||||||||||||||
Sbjct: 56764 gatctccaggagcaccacgccgaagctgtacacgtc 56799
>dbj|AK071281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086E05, full
insert sequence
Length = 1817
Score = 79.8 bits (40), Expect = 4e-012
Identities = 84/96 (87%), Gaps = 2/96 (2%)
Strand = Plus / Minus
Query: 763 tccaccaggctctgctccctgctgggccgcgacttgtcgatcgacttgc-gccccgtcag 821
||||| ||||||||||||||| | ||||||| |||||||| || | || ||||||||||
Sbjct: 1113 tccacgaggctctgctccctgttcggccgcgtcttgtcga-cggcgcgccgccccgtcag 1055
Query: 822 gagctccagcaggaccacgccgaagctgtacacgtc 857
|| |||||| || |||||||||||||||||||||||
Sbjct: 1054 gatctccaggagcaccacgccgaagctgtacacgtc 1019
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0616D06
Length = 153800
Score = 79.8 bits (40), Expect = 4e-012
Identities = 84/96 (87%), Gaps = 2/96 (2%)
Strand = Plus / Minus
Query: 763 tccaccaggctctgctccctgctgggccgcgacttgtcgatcgacttgc-gccccgtcag 821
||||| ||||||||||||||| | ||||||| |||||||| || | || ||||||||||
Sbjct: 22348 tccacgaggctctgctccctgttcggccgcgtcttgtcga-cggcgcgccgccccgtcag 22290
Query: 822 gagctccagcaggaccacgccgaagctgtacacgtc 857
|| |||||| || |||||||||||||||||||||||
Sbjct: 22289 gatctccaggagcaccacgccgaagctgtacacgtc 22254
>gb|AACV01016778.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016778, whole
genome shotgun sequence
Length = 6823
Score = 79.8 bits (40), Expect = 4e-012
Identities = 84/96 (87%), Gaps = 2/96 (2%)
Strand = Plus / Minus
Query: 763 tccaccaggctctgctccctgctgggccgcgacttgtcgatcgacttgc-gccccgtcag 821
||||| ||||||||||||||| | ||||||| |||||||| || | || ||||||||||
Sbjct: 5223 tccacgaggctctgctccctgttcggccgcgtcttgtcga-cggcgcgccgccccgtcag 5165
Query: 822 gagctccagcaggaccacgccgaagctgtacacgtc 857
|| |||||| || |||||||||||||||||||||||
Sbjct: 5164 gatctccaggagcaccacgccgaagctgtacacgtc 5129
>ref|XM_479146.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1816
Score = 79.8 bits (40), Expect = 4e-012
Identities = 84/96 (87%), Gaps = 2/96 (2%)
Strand = Plus / Minus
Query: 763 tccaccaggctctgctccctgctgggccgcgacttgtcgatcgacttgc-gccccgtcag 821
||||| ||||||||||||||| | ||||||| |||||||| || | || ||||||||||
Sbjct: 1112 tccacgaggctctgctccctgttcggccgcgtcttgtcga-cggcgcgccgccccgtcag 1054
Query: 822 gagctccagcaggaccacgccgaagctgtacacgtc 857
|| |||||| || |||||||||||||||||||||||
Sbjct: 1053 gatctccaggagcaccacgccgaagctgtacacgtc 1018
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
Length = 17249721
Score = 79.8 bits (40), Expect = 4e-012
Identities = 84/96 (87%), Gaps = 2/96 (2%)
Strand = Plus / Minus
Query: 763 tccaccaggctctgctccctgctgggccgcgacttgtcgatcgacttgc-gccccgtcag 821
||||| ||||||||||||||| | ||||||| |||||||| || | || ||||||||||
Sbjct: 12818682 tccacgaggctctgctccctgttcggccgcgtcttgtcga-cggcgcgccgccccgtcag 12818624
Query: 822 gagctccagcaggaccacgccgaagctgtacacgtc 857
|| |||||| || |||||||||||||||||||||||
Sbjct: 12818623 gatctccaggagcaccacgccgaagctgtacacgtc 12818588
Score = 58.0 bits (29), Expect = 2e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 817 gtcaggagctccagcaggaccacgccgaagctgtacacgtcactc 861
||||||||||| |||| ||| || |||||||||||||||||||||
Sbjct: 13081739 gtcaggagctctagcatgacaacaccgaagctgtacacgtcactc 13081695
Score = 56.0 bits (28), Expect = 6e-005
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 810 gcgccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
||||||||| |||||||| ||||| || |||||||||||||| |||||
Sbjct: 16740361 gcgccccgtgaggagctcgagcagcacgacgccgaagctgtagacgtc 16740314
Score = 44.1 bits (22), Expect = 0.24
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 1373 ccttgtaaacggtcccaaatcctccttcgccaag 1406
|||||||||||| ||||| ||||||||||||||
Sbjct: 8929589 ccttgtaaacggcaccaaaccctccttcgccaag 8929622
>gb|CH401226.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000063 genomic
scaffold, whole genome shotgun sequence
Length = 15204090
Score = 79.8 bits (40), Expect = 4e-012
Identities = 84/96 (87%), Gaps = 2/96 (2%)
Strand = Plus / Minus
Query: 763 tccaccaggctctgctccctgctgggccgcgacttgtcgatcgacttgc-gccccgtcag 821
||||| ||||||||||||||| | ||||||| |||||||| || | || ||||||||||
Sbjct: 10689367 tccacgaggctctgctccctgttcggccgcgtcttgtcga-cggcgcgccgccccgtcag 10689309
Query: 822 gagctccagcaggaccacgccgaagctgtacacgtc 857
|| |||||| || |||||||||||||||||||||||
Sbjct: 10689308 gatctccaggagcaccacgccgaagctgtacacgtc 10689273
Score = 58.0 bits (29), Expect = 2e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 817 gtcaggagctccagcaggaccacgccgaagctgtacacgtcactc 861
||||||||||| |||| ||| || |||||||||||||||||||||
Sbjct: 10925325 gtcaggagctctagcatgacaacaccgaagctgtacacgtcactc 10925281
Score = 56.0 bits (28), Expect = 6e-005
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 810 gcgccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
||||||||| |||||||| ||||| || |||||||||||||| |||||
Sbjct: 14725780 gcgccccgtgaggagctcgagcagcacgacgccgaagctgtagacgtc 14725733
Score = 44.1 bits (22), Expect = 0.24
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 1373 ccttgtaaacggtcccaaatcctccttcgccaag 1406
|||||||||||| ||||| ||||||||||||||
Sbjct: 6779398 ccttgtaaacggcaccaaaccctccttcgccaag 6779431
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 79.8 bits (40), Expect = 4e-012
Identities = 84/96 (87%), Gaps = 2/96 (2%)
Strand = Plus / Minus
Query: 763 tccaccaggctctgctccctgctgggccgcgacttgtcgatcgacttgc-gccccgtcag 821
||||| ||||||||||||||| | ||||||| |||||||| || | || ||||||||||
Sbjct: 24088806 tccacgaggctctgctccctgttcggccgcgtcttgtcga-cggcgcgccgccccgtcag 24088748
Query: 822 gagctccagcaggaccacgccgaagctgtacacgtc 857
|| |||||| || |||||||||||||||||||||||
Sbjct: 24088747 gatctccaggagcaccacgccgaagctgtacacgtc 24088712
Score = 58.0 bits (29), Expect = 2e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 817 gtcaggagctccagcaggaccacgccgaagctgtacacgtcactc 861
||||||||||| |||| ||| || |||||||||||||||||||||
Sbjct: 24324764 gtcaggagctctagcatgacaacaccgaagctgtacacgtcactc 24324720
Score = 56.0 bits (28), Expect = 6e-005
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 810 gcgccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
||||||||| |||||||| ||||| || |||||||||||||| |||||
Sbjct: 28125219 gcgccccgtgaggagctcgagcagcacgacgccgaagctgtagacgtc 28125172
Score = 44.1 bits (22), Expect = 0.24
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 1373 ccttgtaaacggtcccaaatcctccttcgccaag 1406
|||||||||||| ||||| ||||||||||||||
Sbjct: 20178837 ccttgtaaacggcaccaaaccctccttcgccaag 20178870
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 79.8 bits (40), Expect = 4e-012
Identities = 84/96 (87%), Gaps = 2/96 (2%)
Strand = Plus / Minus
Query: 763 tccaccaggctctgctccctgctgggccgcgacttgtcgatcgacttgc-gccccgtcag 821
||||| ||||||||||||||| | ||||||| |||||||| || | || ||||||||||
Sbjct: 25205677 tccacgaggctctgctccctgttcggccgcgtcttgtcga-cggcgcgccgccccgtcag 25205619
Query: 822 gagctccagcaggaccacgccgaagctgtacacgtc 857
|| |||||| || |||||||||||||||||||||||
Sbjct: 25205618 gatctccaggagcaccacgccgaagctgtacacgtc 25205583
Score = 58.0 bits (29), Expect = 2e-005
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 817 gtcaggagctccagcaggaccacgccgaagctgtacacgtcactc 861
||||||||||| |||| ||| || |||||||||||||||||||||
Sbjct: 25468734 gtcaggagctctagcatgacaacaccgaagctgtacacgtcactc 25468690
Score = 56.0 bits (28), Expect = 6e-005
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 810 gcgccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
||||||||| |||||||| ||||| || |||||||||||||| |||||
Sbjct: 29127356 gcgccccgtgaggagctcgagcagcacgacgccgaagctgtagacgtc 29127309
Score = 50.1 bits (25), Expect = 0.004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 820 aggagctccagcaggaccacgccgaagctgtacacgt 856
|||| ||||||||| ||||| ||||||||||||||||
Sbjct: 5806867 aggatctccagcagcaccaccccgaagctgtacacgt 5806903
Score = 44.1 bits (22), Expect = 0.24
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 1373 ccttgtaaacggtcccaaatcctccttcgccaag 1406
|||||||||||| ||||| ||||||||||||||
Sbjct: 21316584 ccttgtaaacggcaccaaaccctccttcgccaag 21316617
>dbj|AK103037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117E11, full
insert sequence
Length = 2501
Score = 73.8 bits (37), Expect = 3e-010
Identities = 133/165 (80%)
Strand = Plus / Minus
Query: 825 ctccagcaggaccacgccgaagctgtacacgtcactccgagcagtcaagtgaccggtcat 884
|||||| || ||||| || |||||||||||||||||| | ||||||||||| |||||
Sbjct: 1215 ctccagtagcaccactccaaagctgtacacgtcactctttgatgtcaagtgacctgtcat 1156
Query: 885 cacatattcaggggcagcataaccgtaggttcccatcacccgtgtcgacacatgcgtctg 944
||||| || || || ||||| || || |||||||| || || || || ||||| || |
Sbjct: 1155 gacatactccggagctgcatatccataagttcccatgactcgagtagatacatgtgtttt 1096
Query: 945 atcaccttcagggccatcttttgcgaggccaaagtcagacagttt 989
|||||| |||||||||||||| || || ||||| ||||| |||||
Sbjct: 1095 atcaccctcagggccatctttagctagtccaaaatcagagagttt 1051
>ref|NM_192557.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1485
Score = 73.8 bits (37), Expect = 3e-010
Identities = 133/165 (80%)
Strand = Plus / Minus
Query: 825 ctccagcaggaccacgccgaagctgtacacgtcactccgagcagtcaagtgaccggtcat 884
|||||| || ||||| || |||||||||||||||||| | ||||||||||| |||||
Sbjct: 1026 ctccagtagcaccactccaaagctgtacacgtcactctttgatgtcaagtgacctgtcat 967
Query: 885 cacatattcaggggcagcataaccgtaggttcccatcacccgtgtcgacacatgcgtctg 944
||||| || || || ||||| || || |||||||| || || || || ||||| || |
Sbjct: 966 gacatactccggagctgcatatccataagttcccatgactcgagtagatacatgtgtttt 907
Query: 945 atcaccttcagggccatcttttgcgaggccaaagtcagacagttt 989
|||||| |||||||||||||| || || ||||| ||||| |||||
Sbjct: 906 atcaccctcagggccatctttagctagtccaaaatcagagagttt 862
>gb|AU071036.1|AU071036 AU071036 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10635_1A, mRNA sequence
Length = 472
Score = 69.9 bits (35), Expect = 4e-009
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 811 cgccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 145 cgccccgtcagcagctccagcagcaccaccccgaagctgtacacgtc 99
>dbj|AK066978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090P22, full
insert sequence
Length = 2958
Score = 69.9 bits (35), Expect = 4e-009
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 811 cgccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 2207 cgccccgtcagcagctccagcagcaccaccccgaagctgtacacgtc 2161
>gb|AACV01005519.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005519, whole
genome shotgun sequence
Length = 32731
Score = 69.9 bits (35), Expect = 4e-009
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 811 cgccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 19666 cgccccgtcagcagctccagcagcaccaccccgaagctgtacacgtc 19712
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 69.9 bits (35), Expect = 4e-009
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 811 cgccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 8099715 cgccccgtcagcagctccagcagcaccaccccgaagctgtacacgtc 8099761
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 812 gccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
|||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 2399134 gccccgtcaggagctccagcagcacgacgccgaagccgtacacgtc 2399179
Score = 60.0 bits (30), Expect = 4e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 820 aggagctccagcaggaccacgccgaagctgtacacgtc 857
|||||||||||||| || ||||||||||||||||||||
Sbjct: 46231 aggagctccagcagcacgacgccgaagctgtacacgtc 46268
Score = 48.1 bits (24), Expect = 0.015
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 822 gagctccagcaggaccacgccgaagctgtacacgtc 857
|||||| ||||| | |||||||||||||||||||||
Sbjct: 1274436 gagctcgagcagcagcacgccgaagctgtacacgtc 1274471
>dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1534_E09
Length = 126209
Score = 69.9 bits (35), Expect = 4e-009
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 811 cgccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 89457 cgccccgtcagcagctccagcagcaccaccccgaagctgtacacgtc 89503
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 69.9 bits (35), Expect = 4e-009
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 811 cgccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 19573186 cgccccgtcagcagctccagcagcaccaccccgaagctgtacacgtc 19573232
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 812 gccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
|||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 13661666 gccccgtcaggagctccagcagcacgacgccgaagccgtacacgtc 13661711
Score = 60.0 bits (30), Expect = 4e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 820 aggagctccagcaggaccacgccgaagctgtacacgtc 857
|||||||||||||| || ||||||||||||||||||||
Sbjct: 11207595 aggagctccagcagcacgacgccgaagctgtacacgtc 11207632
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 823 agctccagcaggaccacgccgaagctgtacacgtc 857
|||||||| |||| |||||||||||||||||||||
Sbjct: 22359480 agctccaggaggagcacgccgaagctgtacacgtc 22359514
Score = 48.1 bits (24), Expect = 0.015
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 822 gagctccagcaggaccacgccgaagctgtacacgtc 857
|||||| ||||| | |||||||||||||||||||||
Sbjct: 12490053 gagctcgagcagcagcacgccgaagctgtacacgtc 12490088
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 69.9 bits (35), Expect = 4e-009
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 811 cgccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 33026250 cgccccgtcagcagctccagcagcaccaccccgaagctgtacacgtc 33026296
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 812 gccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
|||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 27114730 gccccgtcaggagctccagcagcacgacgccgaagccgtacacgtc 27114775
Score = 61.9 bits (31), Expect = 1e-006
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 811 cgccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
|||||||| || |||||||||| ||| ||||||||||||||||||||
Sbjct: 5354602 cgccccgtgagcagctccagcatgacgacgccgaagctgtacacgtc 5354648
Score = 60.0 bits (30), Expect = 4e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 820 aggagctccagcaggaccacgccgaagctgtacacgtc 857
|||||||||||||| || ||||||||||||||||||||
Sbjct: 24660659 aggagctccagcagcacgacgccgaagctgtacacgtc 24660696
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 823 agctccagcaggaccacgccgaagctgtacacgtc 857
|||||||| |||| |||||||||||||||||||||
Sbjct: 35812544 agctccaggaggagcacgccgaagctgtacacgtc 35812578
Score = 54.0 bits (27), Expect = 2e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 811 cgccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
||||||||||| |||| ||||| ||||| |||||||||||||||||
Sbjct: 1973599 cgccccgtcagaagctgcagcatcaccaccccgaagctgtacacgtc 1973553
Score = 54.0 bits (27), Expect = 2e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 811 cgccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
|||||||| | ||||||||| | |||||||||||||||| |||||||
Sbjct: 568013 cgccccgtgatgagctccaggatgaccacgccgaagctgaacacgtc 568059
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 825 ctccagcaggaccacgccgaagctgtacacgtc 857
|||||||||||| ||||| ||||||||||||||
Sbjct: 7235211 ctccagcaggacgacgccaaagctgtacacgtc 7235243
Score = 50.1 bits (25), Expect = 0.004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 823 agctccagcaggaccacgccgaagctgtacacgtcac 859
||||| ||||||||||| ||||| |||||||||||||
Sbjct: 2994983 agctcaagcaggaccactccgaaactgtacacgtcac 2995019
Score = 48.1 bits (24), Expect = 0.015
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 822 gagctccagcaggaccacgccgaagctgtacacgtc 857
|||||| ||||| | |||||||||||||||||||||
Sbjct: 25943117 gagctcgagcagcagcacgccgaagctgtacacgtc 25943152
Score = 46.1 bits (23), Expect = 0.061
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 823 agctccagcaggaccacgccgaagctgtacacgtc 857
|||||||| ||||| || |||||||||||||||||
Sbjct: 2846698 agctccaggaggacgacaccgaagctgtacacgtc 2846732
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 69.9 bits (35), Expect = 4e-009
Identities = 44/47 (93%)
Strand = Plus / Plus
Query: 811 cgccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct: 32934716 cgccccgtcagcagctccagcagcaccaccccgaagctgtacacgtc 32934762
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 812 gccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
|||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 27234135 gccccgtcaggagctccagcagcacgacgccgaagccgtacacgtc 27234180
Score = 61.9 bits (31), Expect = 1e-006
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 811 cgccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
|||||||| || |||||||||| ||| ||||||||||||||||||||
Sbjct: 5260271 cgccccgtgagcagctccagcatgacgacgccgaagctgtacacgtc 5260317
Score = 60.0 bits (30), Expect = 4e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 820 aggagctccagcaggaccacgccgaagctgtacacgtc 857
|||||||||||||| || ||||||||||||||||||||
Sbjct: 24881232 aggagctccagcagcacgacgccgaagctgtacacgtc 24881269
Score = 54.0 bits (27), Expect = 2e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 823 agctccagcaggaccacgccgaagctgtacacgtc 857
|||||||| |||| |||||||||||||||||||||
Sbjct: 35724925 agctccaggaggagcacgccgaagctgtacacgtc 35724959
Score = 54.0 bits (27), Expect = 2e-004
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 811 cgccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
||||||||||| |||| ||||| ||||| |||||||||||||||||
Sbjct: 1952864 cgccccgtcagaagctgcagcatcaccaccccgaagctgtacacgtc 1952818
Score = 54.0 bits (27), Expect = 2e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 811 cgccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
|||||||| | ||||||||| | |||||||||||||||| |||||||
Sbjct: 566643 cgccccgtgatgagctccaggatgaccacgccgaagctgaacacgtc 566689
Score = 50.1 bits (25), Expect = 0.004
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 825 ctccagcaggaccacgccgaagctgtacacgtc 857
|||||||||||| ||||| ||||||||||||||
Sbjct: 7153758 ctccagcaggacgacgccaaagctgtacacgtc 7153790
Score = 50.1 bits (25), Expect = 0.004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 823 agctccagcaggaccacgccgaagctgtacacgtcac 859
||||| ||||||||||| ||||| |||||||||||||
Sbjct: 2952690 agctcaagcaggaccactccgaaactgtacacgtcac 2952726
Score = 48.1 bits (24), Expect = 0.015
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 822 gagctccagcaggaccacgccgaagctgtacacgtc 857
|||||| ||||| | |||||||||||||||||||||
Sbjct: 26109437 gagctcgagcagcagcacgccgaagctgtacacgtc 26109472
Score = 46.1 bits (23), Expect = 0.061
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 823 agctccagcaggaccacgccgaagctgtacacgtc 857
|||||||| ||||| || |||||||||||||||||
Sbjct: 2817272 agctccaggaggacgacaccgaagctgtacacgtc 2817306
>gb|CB670193.1|CB670193 OSJNEe03C13.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe03C13 3', mRNA sequence
Length = 816
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 811 cgccccgtcaggagctccagcaggaccacgccgaagctgtacacgt 856
||||||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct: 771 cgccccgtcagcagctccagcagcaccaccccgaagctgtacacgt 816
>gb|AACV01005116.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005116, whole
genome shotgun sequence
Length = 32365
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Minus
Query: 812 gccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
|||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 19217 gccccgtcaggagctccagcagcacgacgccgaagccgtacacgtc 19172
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0684A08
Length = 137841
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 812 gccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
|||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 84806 gccccgtcaggagctccagcagcacgacgccgaagccgtacacgtc 84851
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1725_H08
Length = 155431
Score = 67.9 bits (34), Expect = 2e-008
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 812 gccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
|||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 130584 gccccgtcaggagctccagcagcacgacgccgaagccgtacacgtc 130629
>gb|C22548.1|C22548 C22548 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E12066_2A, mRNA sequence
Length = 463
Score = 65.9 bits (33), Expect = 7e-008
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 813 ccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
||||||||||| |||||| || |||||||||||||||||||||||
Sbjct: 346 ccccgtcaggatctccaggagcaccacgccgaagctgtacacgtc 302
>gb|AU070792.1|AU070792 AU070792 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10252_1A, mRNA sequence
Length = 616
Score = 65.9 bits (33), Expect = 7e-008
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 813 ccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 256 ccccgtcaggatctccagcacaaccacgccgaagctgtacacgtc 212
>dbj|AP005174.1| Oryza sativa (japonica cultivar-group) chromosome 8 clone
OSJNBb0008L09, *** SEQUENCING IN PROGRESS ***
Length = 154909
Score = 65.9 bits (33), Expect = 7e-008
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 813 ccccgtcaggagctccagcaggaccacgccgaagctgtacacgtc 857
||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 23580 ccccgtcaggatctccagcacaaccacgccgaagctgtacacgtc 23536
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,094,040
Number of Sequences: 438736
Number of extensions: 3094040
Number of successful extensions: 73097
Number of sequences better than 0.5: 495
Number of HSP's better than 0.5 without gapping: 597
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 47614
Number of HSP's gapped (non-prelim): 25337
length of query: 1649
length of database: 2,800,419,916
effective HSP length: 22
effective length of query: 1627
effective length of database: 2,790,767,724
effective search space: 4540579086948
effective search space used: 4540579086948
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)