BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419405.2.4
(582 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK100959.1| Oryza sativa (japonica cultivar-group) cDNA... 295 1e-077
dbj|AK105318.1| Oryza sativa (japonica cultivar-group) cDNA... 295 1e-077
gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11... 295 1e-077
gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I1... 295 1e-077
gb|AACV01022091.1| Oryza sativa (japonica cultivar-group) c... 295 1e-077
ref|NM_197700.1| Oryza sativa (japonica cultivar-group) bet... 295 1e-077
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 295 1e-077
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 295 1e-077
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 295 1e-077
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 295 1e-077
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 295 1e-077
gb|CF333826.1|CF333826 JMT--02-N24.g1 AtJMT-overexpressing ... 268 3e-069
gb|AU163761.1|AU163761 AU163761 Rice panicle at ripening st... 244 4e-062
gb|AU094457.1|AU094457 AU094457 Rice panicle at ripening st... 220 6e-055
gb|AU161321.1|AU161321 AU161321 Rice callus Oryza sativa (j... 127 7e-027
dbj|AK061498.1| Oryza sativa (japonica cultivar-group) cDNA... 127 7e-027
dbj|AK101728.1| Oryza sativa (japonica cultivar-group) cDNA... 127 7e-027
dbj|AK104197.1| Oryza sativa (japonica cultivar-group) cDNA... 127 7e-027
dbj|AK105799.1| Oryza sativa (japonica cultivar-group) cDNA... 127 7e-027
ref|NM_197698.1| Oryza sativa (japonica cultivar-group) bet... 127 7e-027
gb|AU077523.1|AU077523 AU077523 Rice callus Oryza sativa (j... 119 2e-024
gb|C20417.1|C20417 C20417 Rice panicle at ripening stage Or... 117 7e-024
gb|C98131.1|C98131 C98131 Rice callus Oryza sativa (japonic... 117 7e-024
gb|AU030829.1|AU030829 AU030829 Rice cDNA from immature lea... 117 7e-024
gb|AU094597.1|AU094597 AU094597 Rice panicle at ripening st... 117 7e-024
gb|AU225903.1|AU225903 AU225903 Oryza sativa Koshihikari pi... 117 7e-024
gb|CV722636.1|CV722636 root--01-B24.g1 Rice root lambda pha... 117 7e-024
dbj|AK060096.1| Oryza sativa (japonica cultivar-group) cDNA... 117 7e-024
dbj|AK101357.1| Oryza sativa (japonica cultivar-group) cDNA... 117 7e-024
dbj|AK101806.1| Oryza sativa (japonica cultivar-group) cDNA... 117 7e-024
dbj|AK103929.1| Oryza sativa (japonica cultivar-group) cDNA... 117 7e-024
dbj|AK105981.1| Oryza sativa (japonica cultivar-group) cDNA... 117 7e-024
gb|AACV01022092.1| Oryza sativa (japonica cultivar-group) c... 117 7e-024
ref|NM_197701.1| Oryza sativa (japonica cultivar-group) bet... 117 7e-024
gb|AU108787.1|AU108787 AU108787 Rice callus Oryza sativa (j... 111 4e-022
gb|AU093543.1|AU093543 AU093543 Rice callus Oryza sativa (j... 109 2e-021
gb|C96991.1|C96991 C96991 Rice callus Oryza sativa (japonic... 107 7e-021
dbj|AK064012.1| Oryza sativa (japonica cultivar-group) cDNA... 101 4e-019
dbj|AP003875.3| Oryza sativa (japonica cultivar-group) geno... 101 4e-019
gb|AACV01017536.1| Oryza sativa (japonica cultivar-group) c... 101 4e-019
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 101 4e-019
gb|CH401229.1| Oryza sativa (japonica cultivar-group) chrom... 101 4e-019
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 101 4e-019
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 101 4e-019
gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequ... 100 2e-018
dbj|AK070972.1| Oryza sativa (japonica cultivar-group) cDNA... 100 2e-018
gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbar... 100 2e-018
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 100 2e-018
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 100 2e-018
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 100 2e-018
gb|C27500.1|C27500 C27500 Rice callus cDNA Oryza sativa (ja... 96 3e-017
gb|C27175.1|C27175 C27175 Rice callus cDNA Oryza sativa (ja... 94 1e-016
gb|AU184077.1|AU184077 AU184077 Rice root Oryza sativa (jap... 94 1e-016
gb|AU173230.1|AU173230 AU173230 Rice root Oryza sativa (jap... 88 6e-015
gb|AU184180.1|AU184180 AU184180 Rice root Oryza sativa (jap... 88 6e-015
gb|CD670606.1|CD670606 OsMR021 5MT resistant rice mutant cD... 86 2e-014
gb|AU068467.1|AU068467 AU068467 Rice callus Oryza sativa (j... 82 4e-013
gb|AU184078.1|AU184078 AU184078 Rice root Oryza sativa (jap... 82 4e-013
dbj|AK061423.1| Oryza sativa (japonica cultivar-group) cDNA... 82 4e-013
gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbar... 82 4e-013
gb|AACV01005724.1| Oryza sativa (japonica cultivar-group) c... 82 4e-013
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 82 4e-013
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 82 4e-013
gb|C96739.1|C96739 C96739 Rice callus Oryza sativa (japonic... 78 6e-012
gb|AU029750.1|AU029750 AU029750 Rice panicle shorter than 3... 78 6e-012
gb|AU165472.1|AU165472 AU165472 Rice panicle at flowering s... 78 6e-012
gb|AU162920.1|AU162920 AU162920 Rice green shoot Oryza sati... 76 2e-011
gb|AU166877.1|AU166877 AU166877 Rice callus (2001) Oryza sa... 76 2e-011
gb|C24955.1|C24955 C24955 Rice green shoot Oryza sativa (ja... 70 1e-009
gb|AU030830.1|AU030830 AU030830 Rice cDNA from immature lea... 68 6e-009
gb|AU096413.1|AU096413 AU096413 Rice green shoot Oryza sati... 62 4e-007
dbj|AK059638.1| Oryza sativa (japonica cultivar-group) cDNA... 60 1e-006
dbj|AP005289.2| Oryza sativa (japonica cultivar-group) geno... 60 1e-006
gb|AACV01005076.1| Oryza sativa (japonica cultivar-group) c... 60 1e-006
ref|XM_467145.1| Oryza sativa (japonica cultivar-group), mRNA 60 1e-006
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 60 1e-006
dbj|AP005072.3| Oryza sativa (japonica cultivar-group) geno... 60 1e-006
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 60 1e-006
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 60 1e-006
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 60 1e-006
gb|AU070620.1|AU070620 AU070620 Rice shoot Oryza sativa (ja... 56 2e-005
gb|CD670632.1|CD670632 OsMR047 5MT resistant rice mutant cD... 56 2e-005
dbj|AK058895.1| Oryza sativa (japonica cultivar-group) cDNA... 52 3e-004
dbj|AK061068.1| Oryza sativa (japonica cultivar-group) cDNA... 52 3e-004
dbj|AK104128.1| Oryza sativa (japonica cultivar-group) cDNA... 52 3e-004
ref|NM_197699.1| Oryza sativa (japonica cultivar-group) bet... 52 3e-004
gb|AU108370.1|AU108370 AU108370 Rice shoot Oryza sativa (ja... 50 0.001
gb|AU198282.1|AU198282 AU198282 Rice green shoot Oryza sati... 48 0.005
gb|AU164552.1|AU164552 AU164552 Rice root Oryza sativa (jap... 46 0.021
gb|AU174239.1|AU174239 AU174239 Rice shoot Oryza sativa (ja... 46 0.021
ref|XM_467144.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.021
gb|AQ329048.1|AQ329048 nbxb0044E06r CUGI Rice BAC Library O... 42 0.33
gb|AQ691177.1|AQ691177 nbxb0091O08f CUGI Rice BAC Library O... 42 0.33
dbj|AG207910.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.33
dbj|AG208250.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.33
dbj|AG209377.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.33
dbj|AG211460.1| Oryza sativa (japonica cultivar-group) DNA,... 42 0.33
gb|DU134028.1|DU134028 UCDRGT17815_5.1 UCD RGT Rice Inserti... 42 0.33
gb|D47764.1|D47764 RICS13447A Rice green shoot Oryza sativa... 42 0.33
gb|C93558.1|C93558 C93558 Rice callus Oryza sativa (japonic... 42 0.33
gb|C98492.1|C98492 C98492 Rice panicle at flowering stage O... 42 0.33
gb|AU093769.1|AU093769 AU093769 Rice panicle at flowering s... 42 0.33
gb|AU093795.1|AU093795 AU093795 Rice panicle at flowering s... 42 0.33
gb|AU093825.1|AU093825 AU093825 Rice panicle at flowering s... 42 0.33
gb|AU094059.1|AU094059 AU094059 Rice panicle at flowering s... 42 0.33
gb|AU163318.1|AU163318 AU163318 Rice callus Oryza sativa (j... 42 0.33
gb|AU163434.1|AU163434 AU163434 Rice panicle at flowering s... 42 0.33
gb|AU163584.1|AU163584 AU163584 Rice panicle at flowering s... 42 0.33
gb|AU165517.1|AU165517 AU165517 Rice panicle at flowering s... 42 0.33
gb|AU165536.1|AU165536 AU165536 Rice panicle at flowering s... 42 0.33
gb|AU174046.1|AU174046 AU174046 Rice green shoot Oryza sati... 42 0.33
gb|AU182308.1|AU182308 AU182308 Rice panicle at flowering s... 42 0.33
gb|AU182416.1|AU182416 AU182416 Rice panicle at flowering s... 42 0.33
gb|CB657992.1|CB657992 OSJNEc13L11.f OSJNEc Oryza sativa (j... 42 0.33
gb|AU069413.2|AU069413 AU069413 Rice callus Oryza sativa (j... 42 0.33
dbj|AP004061.1| Oryza sativa (japonica cultivar-group) chro... 42 0.33
dbj|AK070187.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.33
dbj|AK073353.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.33
dbj|AK099112.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.33
dbj|AK105539.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.33
emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC O... 42 0.33
gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15... 42 0.33
dbj|AP005474.3| Oryza sativa (japonica cultivar-group) geno... 42 0.33
dbj|AP005647.3| Oryza sativa (japonica cultivar-group) geno... 42 0.33
emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC O... 42 0.33
ref|NT_107114.1| Oryza sativa (japonica cultivar-group) 42 0.33
ref|NT_107141.1| Oryza sativa (japonica cultivar-group) 42 0.33
ref|NT_107152.1| Oryza sativa (japonica cultivar-group) 42 0.33
ref|NT_107237.1| Oryza sativa (japonica cultivar-group) 42 0.33
dbj|AP005852.2| Oryza sativa (japonica cultivar-group) geno... 42 0.33
dbj|AP006054.3| Oryza sativa (japonica cultivar-group) geno... 42 0.33
gb|AACV01003299.1| Oryza sativa (japonica cultivar-group) c... 42 0.33
gb|AACV01013689.1| Oryza sativa (japonica cultivar-group) c... 42 0.33
gb|AACV01022050.1| Oryza sativa (japonica cultivar-group) c... 42 0.33
gb|AACV01022467.1| Oryza sativa (japonica cultivar-group) c... 42 0.33
gb|AACV01022721.1| Oryza sativa (japonica cultivar-group) c... 42 0.33
gb|AACV01025341.1| Oryza sativa (japonica cultivar-group) c... 42 0.33
ref|NM_197637.1| Oryza sativa (japonica cultivar-group) bet... 42 0.33
ref|XM_464059.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.33
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 42 0.33
gb|CH401282.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.33
gb|CH401261.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.33
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.33
gb|CH401212.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.33
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.33
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.33
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.33
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.33
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 42 0.33
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 42 0.33
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 42 0.33
gb|AC135459.3| Oryza sativa (japonica cultivar-group) chrom... 42 0.33
gb|AC138000.3| Oryza sativa (japonica cultivar-group) chrom... 42 0.33
gb|AC120532.4| Oryza sativa (japonica cultivar-group) chrom... 42 0.33
gb|AC134044.4| Oryza sativa (japonica cultivar-group) chrom... 42 0.33
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.33
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.33
>dbj|AK100959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140O05, full
insert sequence
Length = 1313
Score = 295 bits (149), Expect = 1e-077
Identities = 218/241 (90%)
Strand = Plus / Minus
Query: 341 cccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgc 400
||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||||
Sbjct: 871 cccagttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgc 812
Query: 401 gcagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacg 460
| || ||||||||||| | |||||||||| |||||| |||| ||||||||| |||||||
Sbjct: 811 ggagcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacg 752
Query: 461 actcgcgcatcggcgtccacgacccggagttggcctccatgaggtccacctgcaccacgt 520
||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 751 actcgcgcatcggcgtccacgactgggagttggcctccatgagatccacctgcaccacgt 692
Query: 521 cgccgtcgccgtcctcgaactcgacgagcaccgccaggtacaccgggttggacccctcct 580
||||||||||||||||| |||| || |||||||| | |||||||||||| ||||||||||
Sbjct: 691 cgccgtcgccgtcctcgtactcaaccagcaccgcgaagtacaccgggttcgacccctcct 632
Query: 581 c 581
|
Sbjct: 631 c 631
>dbj|AK105318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-F11, full
insert sequence
Length = 1031
Score = 295 bits (149), Expect = 1e-077
Identities = 218/241 (90%)
Strand = Plus / Minus
Query: 341 cccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgc 400
||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||||
Sbjct: 615 cccagttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgc 556
Query: 401 gcagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacg 460
| || ||||||||||| | |||||||||| |||||| |||| ||||||||| |||||||
Sbjct: 555 ggagcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacg 496
Query: 461 actcgcgcatcggcgtccacgacccggagttggcctccatgaggtccacctgcaccacgt 520
||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 495 actcgcgcatcggcgtccacgactgggagttggcctccatgagatccacctgcaccacgt 436
Query: 521 cgccgtcgccgtcctcgaactcgacgagcaccgccaggtacaccgggttggacccctcct 580
||||||||||||||||| |||| || |||||||| | |||||||||||| ||||||||||
Sbjct: 435 cgccgtcgccgtcctcgtactcaaccagcaccgcgaagtacaccgggttcgacccctcct 376
Query: 581 c 581
|
Sbjct: 375 c 375
>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence,
complete sequence
Length = 147117
Score = 295 bits (149), Expect = 1e-077
Identities = 218/241 (90%)
Strand = Plus / Plus
Query: 341 cccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgc 400
||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||||
Sbjct: 4106 cccagttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgc 4165
Query: 401 gcagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacg 460
| || ||||||||||| | |||||||||| |||||| |||| ||||||||| |||||||
Sbjct: 4166 ggagcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacg 4225
Query: 461 actcgcgcatcggcgtccacgacccggagttggcctccatgaggtccacctgcaccacgt 520
||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 4226 actcgcgcatcggcgtccacgactgggagttggcctccatgagatccacctgcaccacgt 4285
Query: 521 cgccgtcgccgtcctcgaactcgacgagcaccgccaggtacaccgggttggacccctcct 580
||||||||||||||||| |||| || |||||||| | |||||||||||| ||||||||||
Sbjct: 4286 cgccgtcgccgtcctcgtactcaaccagcaccgcgaagtacaccgggttcgacccctcct 4345
Query: 581 c 581
|
Sbjct: 4346 c 4346
Score = 117 bits (59), Expect = 7e-024
Identities = 146/175 (83%)
Strand = Plus / Minus
Query: 306 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 365
|||||||| || ||| |||||| | |||||||| |||||||||||||||||| | |||
Sbjct: 16764 gtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgtt 16705
Query: 366 ggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcg 425
||| || ||||||||||||||||||||| |||||| | ||||||||| || ||| |
Sbjct: 16704 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcctggagcct 16645
Query: 426 gtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|||| || |||||||| ||||||||| ||||||||||| | |||||||||||||
Sbjct: 16644 gtggttggtgtccagcctccagatggagccccacgactccctcatcggcgtccac 16590
Score = 93.7 bits (47), Expect = 1e-016
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
|||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct: 16557 ctccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagcaccgc 16498
Query: 555 caggtacaccgggtt 569
| |||||| |||||
Sbjct: 16497 gaagtacacagggtt 16483
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence,
complete sequence
Length = 135510
Score = 295 bits (149), Expect = 1e-077
Identities = 218/241 (90%)
Strand = Plus / Minus
Query: 341 cccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgc 400
||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||||
Sbjct: 5267 cccagttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgc 5208
Query: 401 gcagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacg 460
| || ||||||||||| | |||||||||| |||||| |||| ||||||||| |||||||
Sbjct: 5207 ggagcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacg 5148
Query: 461 actcgcgcatcggcgtccacgacccggagttggcctccatgaggtccacctgcaccacgt 520
||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 5147 actcgcgcatcggcgtccacgactgggagttggcctccatgagatccacctgcaccacgt 5088
Query: 521 cgccgtcgccgtcctcgaactcgacgagcaccgccaggtacaccgggttggacccctcct 580
||||||||||||||||| |||| || |||||||| | |||||||||||| ||||||||||
Sbjct: 5087 cgccgtcgccgtcctcgtactcaaccagcaccgcgaagtacaccgggttcgacccctcct 5028
Query: 581 c 581
|
Sbjct: 5027 c 5027
Score = 127 bits (64), Expect = 7e-027
Identities = 145/172 (84%)
Strand = Plus / Minus
Query: 308 actggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggttgg 367
|||||| |||||| ||||||| || |||||| |||||| ||||||||||| | |||||
Sbjct: 23050 actggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgttgttgg 22991
Query: 368 ccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcggt 427
| || |||||||||||||| ||| || |||||| |||||||||||||| ||||||||
Sbjct: 22990 cgacgagcgtcttgccggagtcgctgcggatgcggagggagaagggcgcctggaggcggt 22931
Query: 428 ggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcca 479
|| |||||| || ||||||||||| ||||||||||| | ||||||||||||
Sbjct: 22930 ggttggagtcgaggcgccagatggagccccacgactccctcatcggcgtcca 22879
Score = 105 bits (53), Expect = 3e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 490 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagc 549
|||| |||||||||||| |||||||| |||||||||||| ||||||| |||||||||||
Sbjct: 22850 ttggactccatgaggtcgacctgcacgacgtcgccgtcgaggtcctcgtactcgacgagc 22791
Query: 550 accgccaggtacaccgggttggacccctcctcg 582
|| || | ||||||||||||||| |||||||||
Sbjct: 22790 acggcgaagtacaccgggttggagccctcctcg 22758
Score = 52.0 bits (26), Expect = 3e-004
Identities = 110/138 (79%)
Strand = Plus / Minus
Query: 342 ccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgcg 401
||||||||||||||||||||||| ||| | | |||| |||||||||| || |||||
Sbjct: 17154 ccagttggccgggatgacctggtgggcgatgacggtctggccggactcgctgaccatgcg 17095
Query: 402 cagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacga 461
||||||||||| | |||||||||| || ||| || ||||||||||| ||||| ||
Sbjct: 17094 gagggagaaggggccctggaggcggtggttggcgtcgaggcgccagatggatccccagga 17035
Query: 462 ctcgcgcatcggcgtcca 479
|||||| ||||||||
Sbjct: 17034 gcggcgcatgggcgtcca 17017
Score = 48.1 bits (24), Expect = 0.005
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 536 cgaactcgacgagcaccgccaggtacaccgggttggaccc 575
||||||| || ||||| || ||||||||||||||||||||
Sbjct: 16945 cgaactccaccagcacggcgaggtacaccgggttggaccc 16906
>gb|AACV01022091.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg022091, whole
genome shotgun sequence
Length = 36005
Score = 295 bits (149), Expect = 1e-077
Identities = 218/241 (90%)
Strand = Plus / Minus
Query: 341 cccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgc 400
||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||||
Sbjct: 4561 cccagttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgc 4502
Query: 401 gcagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacg 460
| || ||||||||||| | |||||||||| |||||| |||| ||||||||| |||||||
Sbjct: 4501 ggagcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacg 4442
Query: 461 actcgcgcatcggcgtccacgacccggagttggcctccatgaggtccacctgcaccacgt 520
||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 4441 actcgcgcatcggcgtccacgactgggagttggcctccatgagatccacctgcaccacgt 4382
Query: 521 cgccgtcgccgtcctcgaactcgacgagcaccgccaggtacaccgggttggacccctcct 580
||||||||||||||||| |||| || |||||||| | |||||||||||| ||||||||||
Sbjct: 4381 cgccgtcgccgtcctcgtactcaaccagcaccgcgaagtacaccgggttcgacccctcct 4322
Query: 581 c 581
|
Sbjct: 4321 c 4321
Score = 127 bits (64), Expect = 7e-027
Identities = 145/172 (84%)
Strand = Plus / Minus
Query: 308 actggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggttgg 367
|||||| |||||| ||||||| || |||||| |||||| ||||||||||| | |||||
Sbjct: 22344 actggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgttgttgg 22285
Query: 368 ccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcggt 427
| || |||||||||||||| ||| || |||||| |||||||||||||| ||||||||
Sbjct: 22284 cgacgagcgtcttgccggagtcgctgcggatgcggagggagaagggcgcctggaggcggt 22225
Query: 428 ggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcca 479
|| |||||| || ||||||||||| ||||||||||| | ||||||||||||
Sbjct: 22224 ggttggagtcgaggcgccagatggagccccacgactccctcatcggcgtcca 22173
Score = 105 bits (53), Expect = 3e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 490 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagc 549
|||| |||||||||||| |||||||| |||||||||||| ||||||| |||||||||||
Sbjct: 22144 ttggactccatgaggtcgacctgcacgacgtcgccgtcgaggtcctcgtactcgacgagc 22085
Query: 550 accgccaggtacaccgggttggacccctcctcg 582
|| || | ||||||||||||||| |||||||||
Sbjct: 22084 acggcgaagtacaccgggttggagccctcctcg 22052
Score = 52.0 bits (26), Expect = 3e-004
Identities = 110/138 (79%)
Strand = Plus / Minus
Query: 342 ccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgcg 401
||||||||||||||||||||||| ||| | | |||| |||||||||| || |||||
Sbjct: 16448 ccagttggccgggatgacctggtgggcgatgacggtctggccggactcgctgaccatgcg 16389
Query: 402 cagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacga 461
||||||||||| | |||||||||| || ||| || ||||||||||| ||||| ||
Sbjct: 16388 gagggagaaggggccctggaggcggtggttggcgtcgaggcgccagatggatccccagga 16329
Query: 462 ctcgcgcatcggcgtcca 479
|||||| ||||||||
Sbjct: 16328 gcggcgcatgggcgtcca 16311
Score = 48.1 bits (24), Expect = 0.005
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 536 cgaactcgacgagcaccgccaggtacaccgggttggaccc 575
||||||| || ||||| || ||||||||||||||||||||
Sbjct: 16239 cgaactccaccagcacggcgaggtacaccgggttggaccc 16200
>ref|NM_197700.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB3
(OSJNBb0014I11.1), mRNA
Length = 904
Score = 295 bits (149), Expect = 1e-077
Identities = 218/241 (90%)
Strand = Plus / Minus
Query: 341 cccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgc 400
||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||||
Sbjct: 860 cccagttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgc 801
Query: 401 gcagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacg 460
| || ||||||||||| | |||||||||| |||||| |||| ||||||||| |||||||
Sbjct: 800 ggagcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacg 741
Query: 461 actcgcgcatcggcgtccacgacccggagttggcctccatgaggtccacctgcaccacgt 520
||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 740 actcgcgcatcggcgtccacgactgggagttggcctccatgagatccacctgcaccacgt 681
Query: 521 cgccgtcgccgtcctcgaactcgacgagcaccgccaggtacaccgggttggacccctcct 580
||||||||||||||||| |||| || |||||||| | |||||||||||| ||||||||||
Sbjct: 680 cgccgtcgccgtcctcgtactcaaccagcaccgcgaagtacaccgggttcgacccctcct 621
Query: 581 c 581
|
Sbjct: 620 c 620
>ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4609300
Score = 295 bits (149), Expect = 1e-077
Identities = 218/241 (90%)
Strand = Plus / Plus
Query: 341 cccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgc 400
||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||||
Sbjct: 3251286 cccagttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgc 3251345
Query: 401 gcagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacg 460
| || ||||||||||| | |||||||||| |||||| |||| ||||||||| |||||||
Sbjct: 3251346 ggagcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacg 3251405
Query: 461 actcgcgcatcggcgtccacgacccggagttggcctccatgaggtccacctgcaccacgt 520
||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 3251406 actcgcgcatcggcgtccacgactgggagttggcctccatgagatccacctgcaccacgt 3251465
Query: 521 cgccgtcgccgtcctcgaactcgacgagcaccgccaggtacaccgggttggacccctcct 580
||||||||||||||||| |||| || |||||||| | |||||||||||| ||||||||||
Sbjct: 3251466 cgccgtcgccgtcctcgtactcaaccagcaccgcgaagtacaccgggttcgacccctcct 3251525
Query: 581 c 581
|
Sbjct: 3251526 c 3251526
Score = 127 bits (64), Expect = 7e-027
Identities = 145/172 (84%)
Strand = Plus / Plus
Query: 308 actggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggttgg 367
|||||| |||||| ||||||| || |||||| |||||| ||||||||||| | |||||
Sbjct: 3233503 actggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgttgttgg 3233562
Query: 368 ccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcggt 427
| || |||||||||||||| ||| || |||||| |||||||||||||| ||||||||
Sbjct: 3233563 cgacgagcgtcttgccggagtcgctgcggatgcggagggagaagggcgcctggaggcggt 3233622
Query: 428 ggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcca 479
|| |||||| || ||||||||||| ||||||||||| | ||||||||||||
Sbjct: 3233623 ggttggagtcgaggcgccagatggagccccacgactccctcatcggcgtcca 3233674
Score = 117 bits (59), Expect = 7e-024
Identities = 146/175 (83%)
Strand = Plus / Minus
Query: 306 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 365
|||||||| || ||| |||||| | |||||||| |||||||||||||||||| | |||
Sbjct: 3263945 gtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgtt 3263886
Query: 366 ggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcg 425
||| || ||||||||||||||||||||| |||||| | ||||||||| || ||| |
Sbjct: 3263885 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcctggagcct 3263826
Query: 426 gtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|||| || |||||||| ||||||||| ||||||||||| | |||||||||||||
Sbjct: 3263825 gtggttggtgtccagcctccagatggagccccacgactccctcatcggcgtccac 3263771
Score = 105 bits (53), Expect = 3e-020
Identities = 83/93 (89%)
Strand = Plus / Plus
Query: 490 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagc 549
|||| |||||||||||| |||||||| |||||||||||| ||||||| |||||||||||
Sbjct: 3233703 ttggactccatgaggtcgacctgcacgacgtcgccgtcgaggtcctcgtactcgacgagc 3233762
Query: 550 accgccaggtacaccgggttggacccctcctcg 582
|| || | ||||||||||||||| |||||||||
Sbjct: 3233763 acggcgaagtacaccgggttggagccctcctcg 3233795
Score = 93.7 bits (47), Expect = 1e-016
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
|||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct: 3263738 ctccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagcaccgc 3263679
Query: 555 caggtacaccgggtt 569
| |||||| |||||
Sbjct: 3263678 gaagtacacagggtt 3263664
Score = 52.0 bits (26), Expect = 3e-004
Identities = 110/138 (79%)
Strand = Plus / Plus
Query: 342 ccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgcg 401
||||||||||||||||||||||| ||| | | |||| |||||||||| || |||||
Sbjct: 3239399 ccagttggccgggatgacctggtgggcgatgacggtctggccggactcgctgaccatgcg 3239458
Query: 402 cagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacga 461
||||||||||| | |||||||||| || ||| || ||||||||||| ||||| ||
Sbjct: 3239459 gagggagaaggggccctggaggcggtggttggcgtcgaggcgccagatggatccccagga 3239518
Query: 462 ctcgcgcatcggcgtcca 479
|||||| ||||||||
Sbjct: 3239519 gcggcgcatgggcgtcca 3239536
Score = 48.1 bits (24), Expect = 0.005
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 536 cgaactcgacgagcaccgccaggtacaccgggttggaccc 575
||||||| || ||||| || ||||||||||||||||||||
Sbjct: 3239608 cgaactccaccagcacggcgaggtacaccgggttggaccc 3239647
Score = 42.1 bits (21), Expect = 0.33
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 377 tcttgccggactcgttggtgatgcgcagggagaaggg 413
|||||||||||||| |||||| ||| | |||||||||
Sbjct: 2869486 tcttgccggactcggtggtgacgcgaatggagaaggg 2869450
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 295 bits (149), Expect = 1e-077
Identities = 218/241 (90%)
Strand = Plus / Plus
Query: 341 cccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgc 400
||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||||
Sbjct: 9304445 cccagttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgc 9304504
Query: 401 gcagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacg 460
| || ||||||||||| | |||||||||| |||||| |||| ||||||||| |||||||
Sbjct: 9304505 ggagcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacg 9304564
Query: 461 actcgcgcatcggcgtccacgacccggagttggcctccatgaggtccacctgcaccacgt 520
||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 9304565 actcgcgcatcggcgtccacgactgggagttggcctccatgagatccacctgcaccacgt 9304624
Query: 521 cgccgtcgccgtcctcgaactcgacgagcaccgccaggtacaccgggttggacccctcct 580
||||||||||||||||| |||| || |||||||| | |||||||||||| ||||||||||
Sbjct: 9304625 cgccgtcgccgtcctcgtactcaaccagcaccgcgaagtacaccgggttcgacccctcct 9304684
Query: 581 c 581
|
Sbjct: 9304685 c 9304685
Score = 127 bits (64), Expect = 7e-027
Identities = 145/172 (84%)
Strand = Plus / Plus
Query: 308 actggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggttgg 367
|||||| |||||| ||||||| || |||||| |||||| ||||||||||| | |||||
Sbjct: 9286662 actggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgttgttgg 9286721
Query: 368 ccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcggt 427
| || |||||||||||||| ||| || |||||| |||||||||||||| ||||||||
Sbjct: 9286722 cgacgagcgtcttgccggagtcgctgcggatgcggagggagaagggcgcctggaggcggt 9286781
Query: 428 ggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcca 479
|| |||||| || ||||||||||| ||||||||||| | ||||||||||||
Sbjct: 9286782 ggttggagtcgaggcgccagatggagccccacgactccctcatcggcgtcca 9286833
Score = 117 bits (59), Expect = 7e-024
Identities = 146/175 (83%)
Strand = Plus / Minus
Query: 306 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 365
|||||||| || ||| |||||| | |||||||| |||||||||||||||||| | |||
Sbjct: 9316820 gtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgtt 9316761
Query: 366 ggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcg 425
||| || ||||||||||||||||||||| |||||| | ||||||||| || ||| |
Sbjct: 9316760 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcctggagcct 9316701
Query: 426 gtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|||| || |||||||| ||||||||| ||||||||||| | |||||||||||||
Sbjct: 9316700 gtggttggtgtccagcctccagatggagccccacgactccctcatcggcgtccac 9316646
Score = 105 bits (53), Expect = 3e-020
Identities = 83/93 (89%)
Strand = Plus / Plus
Query: 490 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagc 549
|||| |||||||||||| |||||||| |||||||||||| ||||||| |||||||||||
Sbjct: 9286862 ttggactccatgaggtcgacctgcacgacgtcgccgtcgaggtcctcgtactcgacgagc 9286921
Query: 550 accgccaggtacaccgggttggacccctcctcg 582
|| || | ||||||||||||||| |||||||||
Sbjct: 9286922 acggcgaagtacaccgggttggagccctcctcg 9286954
Score = 93.7 bits (47), Expect = 1e-016
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
|||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct: 9316613 ctccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagcaccgc 9316554
Query: 555 caggtacaccgggtt 569
| |||||| |||||
Sbjct: 9316553 gaagtacacagggtt 9316539
Score = 52.0 bits (26), Expect = 3e-004
Identities = 110/138 (79%)
Strand = Plus / Plus
Query: 342 ccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgcg 401
||||||||||||||||||||||| ||| | | |||| |||||||||| || |||||
Sbjct: 9292558 ccagttggccgggatgacctggtgggcgatgacggtctggccggactcgctgaccatgcg 9292617
Query: 402 cagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacga 461
||||||||||| | |||||||||| || ||| || ||||||||||| ||||| ||
Sbjct: 9292618 gagggagaaggggccctggaggcggtggttggcgtcgaggcgccagatggatccccagga 9292677
Query: 462 ctcgcgcatcggcgtcca 479
|||||| ||||||||
Sbjct: 9292678 gcggcgcatgggcgtcca 9292695
Score = 48.1 bits (24), Expect = 0.005
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 536 cgaactcgacgagcaccgccaggtacaccgggttggaccc 575
||||||| || ||||| || ||||||||||||||||||||
Sbjct: 9292767 cgaactccaccagcacggcgaggtacaccgggttggaccc 9292806
Score = 42.1 bits (21), Expect = 0.33
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 377 tcttgccggactcgttggtgatgcgcagggagaaggg 413
|||||||||||||| |||||| ||| | |||||||||
Sbjct: 8899200 tcttgccggactcggtggtgacgcgaatggagaaggg 8899164
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 295 bits (149), Expect = 1e-077
Identities = 218/241 (90%)
Strand = Plus / Plus
Query: 341 cccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgc 400
||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||||
Sbjct: 20170239 cccagttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgc 20170298
Query: 401 gcagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacg 460
| || ||||||||||| | |||||||||| |||||| |||| ||||||||| |||||||
Sbjct: 20170299 ggagcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacg 20170358
Query: 461 actcgcgcatcggcgtccacgacccggagttggcctccatgaggtccacctgcaccacgt 520
||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 20170359 actcgcgcatcggcgtccacgactgggagttggcctccatgagatccacctgcaccacgt 20170418
Query: 521 cgccgtcgccgtcctcgaactcgacgagcaccgccaggtacaccgggttggacccctcct 580
||||||||||||||||| |||| || |||||||| | |||||||||||| ||||||||||
Sbjct: 20170419 cgccgtcgccgtcctcgtactcaaccagcaccgcgaagtacaccgggttcgacccctcct 20170478
Query: 581 c 581
|
Sbjct: 20170479 c 20170479
Score = 127 bits (64), Expect = 7e-027
Identities = 145/172 (84%)
Strand = Plus / Plus
Query: 308 actggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggttgg 367
|||||| |||||| ||||||| || |||||| |||||| ||||||||||| | |||||
Sbjct: 20152456 actggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgttgttgg 20152515
Query: 368 ccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcggt 427
| || |||||||||||||| ||| || |||||| |||||||||||||| ||||||||
Sbjct: 20152516 cgacgagcgtcttgccggagtcgctgcggatgcggagggagaagggcgcctggaggcggt 20152575
Query: 428 ggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcca 479
|| |||||| || ||||||||||| ||||||||||| | ||||||||||||
Sbjct: 20152576 ggttggagtcgaggcgccagatggagccccacgactccctcatcggcgtcca 20152627
Score = 117 bits (59), Expect = 7e-024
Identities = 146/175 (83%)
Strand = Plus / Minus
Query: 306 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 365
|||||||| || ||| |||||| | |||||||| |||||||||||||||||| | |||
Sbjct: 20182614 gtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgtt 20182555
Query: 366 ggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcg 425
||| || ||||||||||||||||||||| |||||| | ||||||||| || ||| |
Sbjct: 20182554 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcctggagcct 20182495
Query: 426 gtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|||| || |||||||| ||||||||| ||||||||||| | |||||||||||||
Sbjct: 20182494 gtggttggtgtccagcctccagatggagccccacgactccctcatcggcgtccac 20182440
Score = 105 bits (53), Expect = 3e-020
Identities = 83/93 (89%)
Strand = Plus / Plus
Query: 490 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagc 549
|||| |||||||||||| |||||||| |||||||||||| ||||||| |||||||||||
Sbjct: 20152656 ttggactccatgaggtcgacctgcacgacgtcgccgtcgaggtcctcgtactcgacgagc 20152715
Query: 550 accgccaggtacaccgggttggacccctcctcg 582
|| || | ||||||||||||||| |||||||||
Sbjct: 20152716 acggcgaagtacaccgggttggagccctcctcg 20152748
Score = 93.7 bits (47), Expect = 1e-016
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
|||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct: 20182407 ctccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagcaccgc 20182348
Query: 555 caggtacaccgggtt 569
| |||||| |||||
Sbjct: 20182347 gaagtacacagggtt 20182333
Score = 52.0 bits (26), Expect = 3e-004
Identities = 110/138 (79%)
Strand = Plus / Plus
Query: 342 ccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgcg 401
||||||||||||||||||||||| ||| | | |||| |||||||||| || |||||
Sbjct: 20158352 ccagttggccgggatgacctggtgggcgatgacggtctggccggactcgctgaccatgcg 20158411
Query: 402 cagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacga 461
||||||||||| | |||||||||| || ||| || ||||||||||| ||||| ||
Sbjct: 20158412 gagggagaaggggccctggaggcggtggttggcgtcgaggcgccagatggatccccagga 20158471
Query: 462 ctcgcgcatcggcgtcca 479
|||||| ||||||||
Sbjct: 20158472 gcggcgcatgggcgtcca 20158489
Score = 48.1 bits (24), Expect = 0.005
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 536 cgaactcgacgagcaccgccaggtacaccgggttggaccc 575
||||||| || ||||| || ||||||||||||||||||||
Sbjct: 20158561 cgaactccaccagcacggcgaggtacaccgggttggaccc 20158600
Score = 42.1 bits (21), Expect = 0.33
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 377 tcttgccggactcgttggtgatgcgcagggagaaggg 413
|||||||||||||| |||||| ||| | |||||||||
Sbjct: 19764994 tcttgccggactcggtggtgacgcgaatggagaaggg 19764958
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 295 bits (149), Expect = 1e-077
Identities = 218/241 (90%)
Strand = Plus / Plus
Query: 341 cccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgc 400
||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||||
Sbjct: 21329092 cccagttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgc 21329151
Query: 401 gcagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacg 460
| || ||||||||||| | |||||||||| |||||| |||| ||||||||| |||||||
Sbjct: 21329152 ggagcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacg 21329211
Query: 461 actcgcgcatcggcgtccacgacccggagttggcctccatgaggtccacctgcaccacgt 520
||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 21329212 actcgcgcatcggcgtccacgactgggagttggcctccatgagatccacctgcaccacgt 21329271
Query: 521 cgccgtcgccgtcctcgaactcgacgagcaccgccaggtacaccgggttggacccctcct 580
||||||||||||||||| |||| || |||||||| | |||||||||||| ||||||||||
Sbjct: 21329272 cgccgtcgccgtcctcgtactcaaccagcaccgcgaagtacaccgggttcgacccctcct 21329331
Query: 581 c 581
|
Sbjct: 21329332 c 21329332
Score = 127 bits (64), Expect = 7e-027
Identities = 145/172 (84%)
Strand = Plus / Plus
Query: 308 actggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggttgg 367
|||||| |||||| ||||||| || |||||| |||||| ||||||||||| | |||||
Sbjct: 21311309 actggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgttgttgg 21311368
Query: 368 ccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcggt 427
| || |||||||||||||| ||| || |||||| |||||||||||||| ||||||||
Sbjct: 21311369 cgacgagcgtcttgccggagtcgctgcggatgcggagggagaagggcgcctggaggcggt 21311428
Query: 428 ggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcca 479
|| |||||| || ||||||||||| ||||||||||| | ||||||||||||
Sbjct: 21311429 ggttggagtcgaggcgccagatggagccccacgactccctcatcggcgtcca 21311480
Score = 117 bits (59), Expect = 7e-024
Identities = 146/175 (83%)
Strand = Plus / Minus
Query: 306 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 365
|||||||| || ||| |||||| | |||||||| |||||||||||||||||| | |||
Sbjct: 21341751 gtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgtt 21341692
Query: 366 ggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcg 425
||| || ||||||||||||||||||||| |||||| | ||||||||| || ||| |
Sbjct: 21341691 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcctggagcct 21341632
Query: 426 gtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|||| || |||||||| ||||||||| ||||||||||| | |||||||||||||
Sbjct: 21341631 gtggttggtgtccagcctccagatggagccccacgactccctcatcggcgtccac 21341577
Score = 105 bits (53), Expect = 3e-020
Identities = 83/93 (89%)
Strand = Plus / Plus
Query: 490 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagc 549
|||| |||||||||||| |||||||| |||||||||||| ||||||| |||||||||||
Sbjct: 21311509 ttggactccatgaggtcgacctgcacgacgtcgccgtcgaggtcctcgtactcgacgagc 21311568
Query: 550 accgccaggtacaccgggttggacccctcctcg 582
|| || | ||||||||||||||| |||||||||
Sbjct: 21311569 acggcgaagtacaccgggttggagccctcctcg 21311601
Score = 93.7 bits (47), Expect = 1e-016
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
|||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct: 21341544 ctccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagcaccgc 21341485
Query: 555 caggtacaccgggtt 569
| |||||| |||||
Sbjct: 21341484 gaagtacacagggtt 21341470
Score = 52.0 bits (26), Expect = 3e-004
Identities = 110/138 (79%)
Strand = Plus / Plus
Query: 342 ccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgcg 401
||||||||||||||||||||||| ||| | | |||| |||||||||| || |||||
Sbjct: 21317205 ccagttggccgggatgacctggtgggcgatgacggtctggccggactcgctgaccatgcg 21317264
Query: 402 cagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacga 461
||||||||||| | |||||||||| || ||| || ||||||||||| ||||| ||
Sbjct: 21317265 gagggagaaggggccctggaggcggtggttggcgtcgaggcgccagatggatccccagga 21317324
Query: 462 ctcgcgcatcggcgtcca 479
|||||| ||||||||
Sbjct: 21317325 gcggcgcatgggcgtcca 21317342
Score = 48.1 bits (24), Expect = 0.005
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 536 cgaactcgacgagcaccgccaggtacaccgggttggaccc 575
||||||| || ||||| || ||||||||||||||||||||
Sbjct: 21317414 cgaactccaccagcacggcgaggtacaccgggttggaccc 21317453
Score = 42.1 bits (21), Expect = 0.33
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 377 tcttgccggactcgttggtgatgcgcagggagaaggg 413
|||||||||||||| |||||| ||| | |||||||||
Sbjct: 20947292 tcttgccggactcggtggtgacgcgaatggagaaggg 20947256
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 295 bits (149), Expect = 1e-077
Identities = 218/241 (90%)
Strand = Plus / Plus
Query: 341 cccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgc 400
||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||||
Sbjct: 21340356 cccagttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgc 21340415
Query: 401 gcagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacg 460
| || ||||||||||| | |||||||||| |||||| |||| ||||||||| |||||||
Sbjct: 21340416 ggagcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacg 21340475
Query: 461 actcgcgcatcggcgtccacgacccggagttggcctccatgaggtccacctgcaccacgt 520
||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 21340476 actcgcgcatcggcgtccacgactgggagttggcctccatgagatccacctgcaccacgt 21340535
Query: 521 cgccgtcgccgtcctcgaactcgacgagcaccgccaggtacaccgggttggacccctcct 580
||||||||||||||||| |||| || |||||||| | |||||||||||| ||||||||||
Sbjct: 21340536 cgccgtcgccgtcctcgtactcaaccagcaccgcgaagtacaccgggttcgacccctcct 21340595
Query: 581 c 581
|
Sbjct: 21340596 c 21340596
Score = 127 bits (64), Expect = 7e-027
Identities = 145/172 (84%)
Strand = Plus / Plus
Query: 308 actggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggttgg 367
|||||| |||||| ||||||| || |||||| |||||| ||||||||||| | |||||
Sbjct: 21322573 actggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgttgttgg 21322632
Query: 368 ccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcggt 427
| || |||||||||||||| ||| || |||||| |||||||||||||| ||||||||
Sbjct: 21322633 cgacgagcgtcttgccggagtcgctgcggatgcggagggagaagggcgcctggaggcggt 21322692
Query: 428 ggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcca 479
|| |||||| || ||||||||||| ||||||||||| | ||||||||||||
Sbjct: 21322693 ggttggagtcgaggcgccagatggagccccacgactccctcatcggcgtcca 21322744
Score = 117 bits (59), Expect = 7e-024
Identities = 146/175 (83%)
Strand = Plus / Minus
Query: 306 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 365
|||||||| || ||| |||||| | |||||||| |||||||||||||||||| | |||
Sbjct: 21353014 gtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgtt 21352955
Query: 366 ggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcg 425
||| || ||||||||||||||||||||| |||||| | ||||||||| || ||| |
Sbjct: 21352954 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcctggagcct 21352895
Query: 426 gtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|||| || |||||||| ||||||||| ||||||||||| | |||||||||||||
Sbjct: 21352894 gtggttggtgtccagcctccagatggagccccacgactccctcatcggcgtccac 21352840
Score = 105 bits (53), Expect = 3e-020
Identities = 83/93 (89%)
Strand = Plus / Plus
Query: 490 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagc 549
|||| |||||||||||| |||||||| |||||||||||| ||||||| |||||||||||
Sbjct: 21322773 ttggactccatgaggtcgacctgcacgacgtcgccgtcgaggtcctcgtactcgacgagc 21322832
Query: 550 accgccaggtacaccgggttggacccctcctcg 582
|| || | ||||||||||||||| |||||||||
Sbjct: 21322833 acggcgaagtacaccgggttggagccctcctcg 21322865
Score = 93.7 bits (47), Expect = 1e-016
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
|||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct: 21352807 ctccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagcaccgc 21352748
Query: 555 caggtacaccgggtt 569
| |||||| |||||
Sbjct: 21352747 gaagtacacagggtt 21352733
Score = 52.0 bits (26), Expect = 3e-004
Identities = 110/138 (79%)
Strand = Plus / Plus
Query: 342 ccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgcg 401
||||||||||||||||||||||| ||| | | |||| |||||||||| || |||||
Sbjct: 21328469 ccagttggccgggatgacctggtgggcgatgacggtctggccggactcgctgaccatgcg 21328528
Query: 402 cagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacga 461
||||||||||| | |||||||||| || ||| || ||||||||||| ||||| ||
Sbjct: 21328529 gagggagaaggggccctggaggcggtggttggcgtcgaggcgccagatggatccccagga 21328588
Query: 462 ctcgcgcatcggcgtcca 479
|||||| ||||||||
Sbjct: 21328589 gcggcgcatgggcgtcca 21328606
Score = 48.1 bits (24), Expect = 0.005
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 536 cgaactcgacgagcaccgccaggtacaccgggttggaccc 575
||||||| || ||||| || ||||||||||||||||||||
Sbjct: 21328678 cgaactccaccagcacggcgaggtacaccgggttggaccc 21328717
Score = 42.1 bits (21), Expect = 0.33
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 377 tcttgccggactcgttggtgatgcgcagggagaaggg 413
|||||||||||||| |||||| ||| | |||||||||
Sbjct: 20958556 tcttgccggactcggtggtgacgcgaatggagaaggg 20958520
>gb|CF333826.1|CF333826 JMT--02-N24.g1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--02-N24, mRNA sequence
Length = 572
Score = 268 bits (135), Expect = 3e-069
Identities = 218/243 (89%), Gaps = 2/243 (0%)
Strand = Plus / Plus
Query: 341 cccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgc 400
||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||||
Sbjct: 262 cccagttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgc 321
Query: 401 gcagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacg 460
| || ||||||||||| | |||||||||| |||||| |||| ||||||||| |||||||
Sbjct: 322 ggagcgagaagggcgccgtgaggcggtggttggagtcgagcctccagatggagccccacg 381
Query: 461 actcgcgcatcggcgtccacgac-ccggagttggcctccatgaggtccacctgcaccacg 519
||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 382 actcgcgcatcggcgtccacgactggggagttggcctccatgagatccacctgcaccacg 441
Query: 520 tcgccg-tcgccgtcctcgaactcgacgagcaccgccaggtacaccgggttggacccctc 578
|||||| |||||||||||| |||| || |||||||| | |||||||||||| ||||||||
Sbjct: 442 tcgccgttcgccgtcctcgtactcaaccagcaccgcgaagtacaccgggttcgacccctc 501
Query: 579 ctc 581
|||
Sbjct: 502 ctc 504
>gb|AU163761.1|AU163761 AU163761 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10926, mRNA sequence
Length = 711
Score = 244 bits (123), Expect = 4e-062
Identities = 210/237 (88%), Gaps = 2/237 (0%)
Strand = Plus / Minus
Query: 341 cccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgc 400
||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||||
Sbjct: 285 cccagttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgc 226
Query: 401 gcagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacg 460
| | | |||||||||| | ||| ||||| |||||| |||| ||||||||| |||||||
Sbjct: 225 ggacg-agaagggcgccgtgagn-ggtggttggagtcgagcctccagatggagccccacg 168
Query: 461 actcgcgcatcggcgtccacgacccggagttggcctccatgaggtccacctgcaccacgt 520
||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 167 actcgcgcatcggcgtccacgactgggagttggcctccatgagatccacctgcaccacgt 108
Query: 521 cgccgtcgccgtcctcgaactcgacgagcaccgccaggtacaccgggttggacccct 577
||||||||||||||||| |||| || |||||||| | |||||||||||| ||||||
Sbjct: 107 cgccgtcgccgtcctcgtactcaaccagcaccgcgaagtacaccgggttcnacccct 51
>gb|AU094457.1|AU094457 AU094457 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10880, mRNA sequence
Length = 683
Score = 220 bits (111), Expect = 6e-055
Identities = 202/231 (87%), Gaps = 2/231 (0%)
Strand = Plus / Minus
Query: 341 cccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgc 400
||||||||||||||||||||||| |||| || ||| |||||||||||||||||||||||
Sbjct: 250 cccagttggccgggatgacctggctggcgacgagctgcttgccggactcgttggtgatgc 191
Query: 401 gcagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacg 460
| || ||||||||||| | |||||||||| |||||| |||| |||||||| |||||||
Sbjct: 190 ggagcgagaagggcgccgtgaggcggtggttggagtcgagccttcagatggagccccacg 131
Query: 461 actcgcgcatcggcgtccacgacccggagttggcctccatgaggtccacctgcaccacgt 520
|||||||||| ||||| |||||| |||||||||||||||||| |||||||| |||||||
Sbjct: 130 actcgcgcatnggcgtncacgactgggagttggcctccatgagatccacctgnaccacgt 71
Query: 521 cg-ccgtcgccgtcc-tcgaactcgacgagcaccgccaggtacaccgggtt 569
|| |||||||||||| ||| |||| || ||||||| | ||||||||||||
Sbjct: 70 cgcccgtcgccgtccttcgtactcaaccagcaccgngaagtacaccgggtt 20
>gb|AU161321.1|AU161321 AU161321 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C61589, mRNA sequence
Length = 710
Score = 127 bits (64), Expect = 7e-027
Identities = 145/172 (84%)
Strand = Plus / Minus
Query: 308 actggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggttgg 367
|||||| |||||| ||||||| || |||||| |||||| ||||||||||| | |||||
Sbjct: 369 actggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgttgttgg 310
Query: 368 ccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcggt 427
| || |||||||||||||| ||| || |||||| |||||||||||||| ||||||||
Sbjct: 309 cgacgagcgtcttgccggagtcgctgcggatgcggagggagaagggcgcctggaggcggt 250
Query: 428 ggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcca 479
|| |||||| || ||||||||||| ||||||||||| | ||||||||||||
Sbjct: 249 ggttggagtcgaggcgccagatggagccccacgactccctcatcggcgtcca 198
Score = 99.6 bits (50), Expect = 2e-018
Identities = 82/93 (88%)
Strand = Plus / Minus
Query: 490 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagc 549
|||| |||||||||||| |||||||| | |||||||||| ||||||| |||||||||||
Sbjct: 169 ttggactccatgaggtcgacctgcacgangtcgccgtcgaggtcctcgtactcgacgagc 110
Query: 550 accgccaggtacaccgggttggacccctcctcg 582
|| || | ||||||||||||||| |||||||||
Sbjct: 109 acggcgaagtacaccgggttggagccctcctcg 77
>dbj|AK061498.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D06, full
insert sequence
Length = 1259
Score = 127 bits (64), Expect = 7e-027
Identities = 145/172 (84%)
Strand = Plus / Minus
Query: 308 actggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggttgg 367
|||||| |||||| ||||||| || |||||| |||||| ||||||||||| | |||||
Sbjct: 929 actggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgttgttgg 870
Query: 368 ccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcggt 427
| || |||||||||||||| ||| || |||||| |||||||||||||| ||||||||
Sbjct: 869 cgacgagcgtcttgccggagtcgctgcggatgcggagggagaagggcgcctggaggcggt 810
Query: 428 ggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcca 479
|| |||||| || ||||||||||| ||||||||||| | ||||||||||||
Sbjct: 809 ggttggagtcgaggcgccagatggagccccacgactccctcatcggcgtcca 758
Score = 105 bits (53), Expect = 3e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 490 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagc 549
|||| |||||||||||| |||||||| |||||||||||| ||||||| |||||||||||
Sbjct: 729 ttggactccatgaggtcgacctgcacgacgtcgccgtcgaggtcctcgtactcgacgagc 670
Query: 550 accgccaggtacaccgggttggacccctcctcg 582
|| || | ||||||||||||||| |||||||||
Sbjct: 669 acggcgaagtacaccgggttggagccctcctcg 637
>dbj|AK101728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061F13, full
insert sequence
Length = 1263
Score = 127 bits (64), Expect = 7e-027
Identities = 145/172 (84%)
Strand = Plus / Minus
Query: 308 actggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggttgg 367
|||||| |||||| ||||||| || |||||| |||||| ||||||||||| | |||||
Sbjct: 935 actggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgttgttgg 876
Query: 368 ccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcggt 427
| || |||||||||||||| ||| || |||||| |||||||||||||| ||||||||
Sbjct: 875 cgacgagcgtcttgccggagtcgctgcggatgcggagggagaagggcgcctggaggcggt 816
Query: 428 ggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcca 479
|| |||||| || ||||||||||| ||||||||||| | ||||||||||||
Sbjct: 815 ggttggagtcgaggcgccagatggagccccacgactccctcatcggcgtcca 764
Score = 105 bits (53), Expect = 3e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 490 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagc 549
|||| |||||||||||| |||||||| |||||||||||| ||||||| |||||||||||
Sbjct: 735 ttggactccatgaggtcgacctgcacgacgtcgccgtcgaggtcctcgtactcgacgagc 676
Query: 550 accgccaggtacaccgggttggacccctcctcg 582
|| || | ||||||||||||||| |||||||||
Sbjct: 675 acggcgaagtacaccgggttggagccctcctcg 643
>dbj|AK104197.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A02, full
insert sequence
Length = 1257
Score = 127 bits (64), Expect = 7e-027
Identities = 145/172 (84%)
Strand = Plus / Minus
Query: 308 actggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggttgg 367
|||||| |||||| ||||||| || |||||| |||||| ||||||||||| | |||||
Sbjct: 929 actggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgttgttgg 870
Query: 368 ccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcggt 427
| || |||||||||||||| ||| || |||||| |||||||||||||| ||||||||
Sbjct: 869 cgacgagcgtcttgccggagtcgctgcggatgcggagggagaagggcgcctggaggcggt 810
Query: 428 ggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcca 479
|| |||||| || ||||||||||| ||||||||||| | ||||||||||||
Sbjct: 809 ggttggagtcgaggcgccagatggagccccacgactccctcatcggcgtcca 758
Score = 105 bits (53), Expect = 3e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 490 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagc 549
|||| |||||||||||| |||||||| |||||||||||| ||||||| |||||||||||
Sbjct: 729 ttggactccatgaggtcgacctgcacgacgtcgccgtcgaggtcctcgtactcgacgagc 670
Query: 550 accgccaggtacaccgggttggacccctcctcg 582
|| || | ||||||||||||||| |||||||||
Sbjct: 669 acggcgaagtacaccgggttggagccctcctcg 637
>dbj|AK105799.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A09, full
insert sequence
Length = 1257
Score = 127 bits (64), Expect = 7e-027
Identities = 145/172 (84%)
Strand = Plus / Minus
Query: 308 actggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggttgg 367
|||||| |||||| ||||||| || |||||| |||||| ||||||||||| | |||||
Sbjct: 929 actggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgttgttgg 870
Query: 368 ccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcggt 427
| || |||||||||||||| ||| || |||||| |||||||||||||| ||||||||
Sbjct: 869 cgacgagcgtcttgccggagtcgctgcggatgcggagggagaagggcgcctggaggcggt 810
Query: 428 ggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcca 479
|| |||||| || ||||||||||| ||||||||||| | ||||||||||||
Sbjct: 809 ggttggagtcgaggcgccagatggagccccacgactccctcatcggcgtcca 758
Score = 105 bits (53), Expect = 3e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 490 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagc 549
|||| |||||||||||| |||||||| |||||||||||| ||||||| |||||||||||
Sbjct: 729 ttggactccatgaggtcgacctgcacgacgtcgccgtcgaggtcctcgtactcgacgagc 670
Query: 550 accgccaggtacaccgggttggacccctcctcg 582
|| || | ||||||||||||||| |||||||||
Sbjct: 669 acggcgaagtacaccgggttggagccctcctcg 637
>ref|NM_197698.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB6
(OSJNBb0014I11.3), mRNA
Length = 1240
Score = 127 bits (64), Expect = 7e-027
Identities = 145/172 (84%)
Strand = Plus / Minus
Query: 308 actggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggttgg 367
|||||| |||||| ||||||| || |||||| |||||| ||||||||||| | |||||
Sbjct: 916 actggacgatggagcggtagttggagttgggggaccagttcgccgggatgacgttgttgg 857
Query: 368 ccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcggt 427
| || |||||||||||||| ||| || |||||| |||||||||||||| ||||||||
Sbjct: 856 cgacgagcgtcttgccggagtcgctgcggatgcggagggagaagggcgcctggaggcggt 797
Query: 428 ggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcca 479
|| |||||| || ||||||||||| ||||||||||| | ||||||||||||
Sbjct: 796 ggttggagtcgaggcgccagatggagccccacgactccctcatcggcgtcca 745
Score = 105 bits (53), Expect = 3e-020
Identities = 83/93 (89%)
Strand = Plus / Minus
Query: 490 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagc 549
|||| |||||||||||| |||||||| |||||||||||| ||||||| |||||||||||
Sbjct: 716 ttggactccatgaggtcgacctgcacgacgtcgccgtcgaggtcctcgtactcgacgagc 657
Query: 550 accgccaggtacaccgggttggacccctcctcg 582
|| || | ||||||||||||||| |||||||||
Sbjct: 656 acggcgaagtacaccgggttggagccctcctcg 624
>gb|AU077523.1|AU077523 AU077523 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52443_12Z, mRNA sequence
Length = 413
Score = 119 bits (60), Expect = 2e-024
Identities = 146/175 (83%)
Strand = Plus / Minus
Query: 306 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 365
|||||||| || ||| |||||| | |||||||| |||||||||||||||||| | |||
Sbjct: 221 gtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgtt 162
Query: 366 ggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcg 425
||| || ||||||||||||||||||||| |||||| | ||||||||| || ||| |
Sbjct: 161 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcctggagcct 102
Query: 426 gtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|||| || |||||||| ||||||||| ||||||||||| | |||||||||||||
Sbjct: 101 gtggttggngtccagcctccagatggagccccacgactccctcatcggcgtccac 47
>gb|C20417.1|C20417 C20417 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E11993_1A, mRNA sequence
Length = 449
Score = 117 bits (59), Expect = 7e-024
Identities = 146/175 (83%)
Strand = Plus / Minus
Query: 306 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 365
|||||||| || ||| |||||| | |||||||| |||||||||||||||||| | |||
Sbjct: 229 gtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgtt 170
Query: 366 ggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcg 425
||| || ||||||||||||||||||||| |||||| | ||||||||| || ||| |
Sbjct: 169 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcctggagcct 110
Query: 426 gtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|||| || |||||||| ||||||||| ||||||||||| | |||||||||||||
Sbjct: 109 gtggttggtgtccagcctccagatggagccccacgactccctcatcggcgtccac 55
>gb|C98131.1|C98131 C98131 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C0755_10Z, mRNA sequence
Length = 748
Score = 117 bits (59), Expect = 7e-024
Identities = 146/175 (83%)
Strand = Plus / Minus
Query: 306 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 365
|||||||| || ||| |||||| | |||||||| |||||||||||||||||| | |||
Sbjct: 413 gtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgtt 354
Query: 366 ggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcg 425
||| || ||||||||||||||||||||| |||||| | ||||||||| || ||| |
Sbjct: 353 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcctggagcct 294
Query: 426 gtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|||| || |||||||| ||||||||| ||||||||||| | |||||||||||||
Sbjct: 293 gtggttggtgtccagcctccagatggagccccacgactccctcatcggcgtccac 239
Score = 87.7 bits (44), Expect = 6e-015
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
|||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct: 206 ctccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagcaccgc 147
>gb|AU030829.1|AU030829 AU030829 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60311_1A, mRNA sequence
Length = 378
Score = 117 bits (59), Expect = 7e-024
Identities = 105/120 (87%), Gaps = 1/120 (0%)
Strand = Plus / Minus
Query: 463 tcgcgcatcggcgtccacgacccggagttggcctccatgaggtccacctgcaccacgtcg 522
||||||||| |||||||||| ||| ||||| |||||||| ||||||||||||||||||
Sbjct: 378 tcgcgcatcngcgtccacgantgggatttggcntccatgagatccacctgcaccacgtcg 319
Query: 523 ccgtcgccgtcctcgaactcga-cgagcaccgccaggtacaccgggttggacccctcctc 581
||||||||||||||| |||| | | |||||||| | ||||||||| || |||||||||||
Sbjct: 318 ccgtcgccgtcctcgtactcaacccagcaccgcgaagtacaccggtttcgacccctcctc 259
>gb|AU094597.1|AU094597 AU094597 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E11993, mRNA sequence
Length = 562
Score = 117 bits (59), Expect = 7e-024
Identities = 146/175 (83%)
Strand = Plus / Minus
Query: 306 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 365
|||||||| || ||| |||||| | |||||||| |||||||||||||||||| | |||
Sbjct: 228 gtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgtt 169
Query: 366 ggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcg 425
||| || ||||||||||||||||||||| |||||| | ||||||||| || ||| |
Sbjct: 168 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcctggagcct 109
Query: 426 gtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|||| || |||||||| ||||||||| ||||||||||| | |||||||||||||
Sbjct: 108 gtggttggtgtccagcctccagatggagccccacgactccctcatcggcgtccac 54
>gb|AU225903.1|AU225903 AU225903 Oryza sativa Koshihikari pistil Oryza sativa (japonica
cultivar-group) cDNA clone KP3-0953, mRNA sequence
Length = 572
Score = 117 bits (59), Expect = 7e-024
Identities = 146/175 (83%)
Strand = Plus / Minus
Query: 306 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 365
|||||||| || ||| |||||| | |||||||| |||||||||||||||||| | |||
Sbjct: 286 gtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgtt 227
Query: 366 ggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcg 425
||| || ||||||||||||||||||||| |||||| | ||||||||| || ||| |
Sbjct: 226 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcctggagcct 167
Query: 426 gtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|||| || |||||||| ||||||||| ||||||||||| | |||||||||||||
Sbjct: 166 gtggttggtgtccagcctccagatggagccccacgactccctcatcggcgtccac 112
Score = 87.7 bits (44), Expect = 6e-015
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
|||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct: 79 ctccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagcaccgc 20
>gb|CV722636.1|CV722636 root--01-B24.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone
root--01-B24, mRNA sequence
Length = 398
Score = 117 bits (59), Expect = 7e-024
Identities = 146/175 (83%)
Strand = Plus / Minus
Query: 306 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 365
|||||||| || ||| |||||| | |||||||| |||||||||||||||||| | |||
Sbjct: 266 gtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgtt 207
Query: 366 ggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcg 425
||| || ||||||||||||||||||||| |||||| | ||||||||| || ||| |
Sbjct: 206 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcctggagcct 147
Query: 426 gtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|||| || |||||||| ||||||||| ||||||||||| | |||||||||||||
Sbjct: 146 gtggttggtgtccagcctccagatggagccccacgactccctcatcggcgtccac 92
Score = 79.8 bits (40), Expect = 2e-012
Identities = 46/48 (95%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactc 542
|||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 59 ctccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactc 12
>dbj|AK060096.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G02, full
insert sequence
Length = 1293
Score = 117 bits (59), Expect = 7e-024
Identities = 146/175 (83%)
Strand = Plus / Minus
Query: 306 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 365
|||||||| || ||| |||||| | |||||||| |||||||||||||||||| | |||
Sbjct: 974 gtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgtt 915
Query: 366 ggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcg 425
||| || ||||||||||||||||||||| |||||| | ||||||||| || ||| |
Sbjct: 914 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcctggagcct 855
Query: 426 gtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|||| || |||||||| ||||||||| ||||||||||| | |||||||||||||
Sbjct: 854 gtggttggtgtccagcctccagatggagccccacgactccctcatcggcgtccac 800
Score = 85.7 bits (43), Expect = 2e-014
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
|||||| ||||||| |||||||||||||||||||||||||||| |||| || ||||||||
Sbjct: 767 ctccatcaggtccatctgcaccacgtcgccgtcgccgtcctcgtactccaccagcaccgc 708
Query: 555 caggtacaccgggtt 569
| |||||| |||||
Sbjct: 707 gaagtacacagggtt 693
>dbj|AK101357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035B15, full
insert sequence
Length = 1475
Score = 117 bits (59), Expect = 7e-024
Identities = 146/175 (83%)
Strand = Plus / Minus
Query: 306 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 365
|||||||| || ||| |||||| | |||||||| |||||||||||||||||| | |||
Sbjct: 1156 gtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgtt 1097
Query: 366 ggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcg 425
||| || ||||||||||||||||||||| |||||| | ||||||||| || ||| |
Sbjct: 1096 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcctggagcct 1037
Query: 426 gtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|||| || |||||||| ||||||||| ||||||||||| | |||||||||||||
Sbjct: 1036 gtggttggtgtccagcctccagatggagccccacgactccctcatcggcgtccac 982
Score = 93.7 bits (47), Expect = 1e-016
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
|||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct: 949 ctccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagcaccgc 890
Query: 555 caggtacaccgggtt 569
| |||||| |||||
Sbjct: 889 gaagtacacagggtt 875
>dbj|AK101806.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033066K12, full
insert sequence
Length = 1883
Score = 117 bits (59), Expect = 7e-024
Identities = 146/175 (83%)
Strand = Plus / Minus
Query: 306 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 365
|||||||| || ||| |||||| | |||||||| |||||||||||||||||| | |||
Sbjct: 1552 gtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgtt 1493
Query: 366 ggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcg 425
||| || ||||||||||||||||||||| |||||| | ||||||||| || ||| |
Sbjct: 1492 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcctggagcct 1433
Query: 426 gtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|||| || |||||||| ||||||||| ||||||||||| | |||||||||||||
Sbjct: 1432 gtggttggtgtccagcctccagatggagccccacgactccctcatcggcgtccac 1378
Score = 93.7 bits (47), Expect = 1e-016
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
|||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct: 1345 ctccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagcaccgc 1286
Query: 555 caggtacaccgggtt 569
| |||||| |||||
Sbjct: 1285 gaagtacacagggtt 1271
>dbj|AK103929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D11, full
insert sequence
Length = 1266
Score = 117 bits (59), Expect = 7e-024
Identities = 146/175 (83%)
Strand = Plus / Minus
Query: 306 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 365
|||||||| || ||| |||||| | |||||||| |||||||||||||||||| | |||
Sbjct: 968 gtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgtt 909
Query: 366 ggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcg 425
||| || ||||||||||||||||||||| |||||| | ||||||||| || ||| |
Sbjct: 908 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcctggagcct 849
Query: 426 gtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|||| || |||||||| ||||||||| ||||||||||| | |||||||||||||
Sbjct: 848 gtggttggtgtccagcctccagatggagccccacgactccctcatcggcgtccac 794
Score = 93.7 bits (47), Expect = 1e-016
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
|||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct: 761 ctccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagcaccgc 702
Query: 555 caggtacaccgggtt 569
| |||||| |||||
Sbjct: 701 gaagtacacagggtt 687
>dbj|AK105981.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F12, full
insert sequence
Length = 1290
Score = 117 bits (59), Expect = 7e-024
Identities = 146/175 (83%)
Strand = Plus / Minus
Query: 306 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 365
|||||||| || ||| |||||| | |||||||| |||||||||||||||||| | |||
Sbjct: 975 gtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgtt 916
Query: 366 ggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcg 425
||| || ||||||||||||||||||||| |||||| | ||||||||| || ||| |
Sbjct: 915 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcctggagcct 856
Query: 426 gtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|||| || |||||||| ||||||||| ||||||||||| | |||||||||||||
Sbjct: 855 gtggttggtgtccagcctccagatggagccccacgactccctcatcggcgtccac 801
Score = 93.7 bits (47), Expect = 1e-016
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
|||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct: 768 ctccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagcaccgc 709
Query: 555 caggtacaccgggtt 569
| |||||| |||||
Sbjct: 708 gaagtacacagggtt 694
>gb|AACV01022092.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg022092, whole
genome shotgun sequence
Length = 10831
Score = 117 bits (59), Expect = 7e-024
Identities = 146/175 (83%)
Strand = Plus / Minus
Query: 306 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 365
|||||||| || ||| |||||| | |||||||| |||||||||||||||||| | |||
Sbjct: 7765 gtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgtt 7706
Query: 366 ggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcg 425
||| || ||||||||||||||||||||| |||||| | ||||||||| || ||| |
Sbjct: 7705 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcctggagcct 7646
Query: 426 gtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|||| || |||||||| ||||||||| ||||||||||| | |||||||||||||
Sbjct: 7645 gtggttggtgtccagcctccagatggagccccacgactccctcatcggcgtccac 7591
Score = 93.7 bits (47), Expect = 1e-016
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
|||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct: 7558 ctccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagcaccgc 7499
Query: 555 caggtacaccgggtt 569
| |||||| |||||
Sbjct: 7498 gaagtacacagggtt 7484
>ref|NM_197701.1| Oryza sativa (japonica cultivar-group) beta-expansin EXPB4
(OSJNBa0010C11.2), mRNA
Length = 1340
Score = 117 bits (59), Expect = 7e-024
Identities = 146/175 (83%)
Strand = Plus / Minus
Query: 306 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 365
|||||||| || ||| |||||| | |||||||| |||||||||||||||||| | |||
Sbjct: 962 gtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgtt 903
Query: 366 ggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcg 425
||| || ||||||||||||||||||||| |||||| | ||||||||| || ||| |
Sbjct: 902 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcctggagcct 843
Query: 426 gtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|||| || |||||||| ||||||||| ||||||||||| | |||||||||||||
Sbjct: 842 gtggttggtgtccagcctccagatggagccccacgactccctcatcggcgtccac 788
Score = 93.7 bits (47), Expect = 1e-016
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
|||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct: 755 ctccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagcaccgc 696
Query: 555 caggtacaccgggtt 569
| |||||| |||||
Sbjct: 695 gaagtacacagggtt 681
>gb|AU108787.1|AU108787 AU108787 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C51142, mRNA sequence
Length = 579
Score = 111 bits (56), Expect = 4e-022
Identities = 145/175 (82%)
Strand = Plus / Minus
Query: 306 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 365
|||||||| || ||| |||||| | |||||||| |||||||||||||||||| | ||
Sbjct: 266 gtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgtn 207
Query: 366 ggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcg 425
||| || ||||||||||||||||||||| |||||| | ||||||||| || ||| |
Sbjct: 206 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaagggggcctggagcct 147
Query: 426 gtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|||| || |||||||| ||||||||| ||||||||||| | |||||||||||||
Sbjct: 146 gtggttggtgtccagcctccagatggagccccacgactccctcatcggcgtccac 92
Score = 77.8 bits (39), Expect = 6e-012
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccg 553
|||||| |||||||||||||||||||| ||||||||||||||| |||| || |||||||
Sbjct: 59 ctccatcaggtccacctgcaccacgtctccgtcgccgtcctcgtactccaccagcaccg 1
>gb|AU093543.1|AU093543 AU093543 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C51295, mRNA sequence
Length = 634
Score = 109 bits (55), Expect = 2e-021
Identities = 118/139 (84%)
Strand = Plus / Minus
Query: 342 ccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgcg 401
|||||||||||||||||| | |||||| || ||||||||||||||||||||| ||||||
Sbjct: 267 ccagttggccgggatgacgttgttggcgacgagcgtcttgccggactcgttgcggatgcg 208
Query: 402 cagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacga 461
| ||||||||| || ||| | |||| || |||||||| ||||||||| ||||||||
Sbjct: 207 gatggagaagggggcctggagcctgtggttggtgtccagcctccagatggagccccacga 148
Query: 462 ctcgcgcatcggcgtccac 480
||| | |||||||||||||
Sbjct: 147 ctccctcatcggcgtccac 129
Score = 81.8 bits (41), Expect = 4e-013
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
|||||| |||||||||||||||| ||||||||||||||||||| |||| || ||||||||
Sbjct: 96 ctccatcaggtccacctgcaccangtcgccgtcgccgtcctcgtactccaccagcaccgc 37
>gb|C96991.1|C96991 C96991 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C50438_8Z, mRNA sequence
Length = 633
Score = 107 bits (54), Expect = 7e-021
Identities = 145/174 (83%), Gaps = 1/174 (0%)
Strand = Plus / Minus
Query: 306 gtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggtt 365
|||||||| || ||| |||||| | |||||||| |||||||||||||||||| | |||
Sbjct: 298 gtactggacgaaggagcggtagaatgtgttgggcctccagttggccgggatgacgttgtt 239
Query: 366 ggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcg 425
||| || ||||||||||||||||||||| |||||| | |||||| || || | ||| |
Sbjct: 238 ggcgacgagcgtcttgccggactcgttgcggatgcggatggagaaaggggctg-gagcct 180
Query: 426 gtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtcca 479
|||| || |||||||| ||||||||| ||||||||||| | ||||||||||||
Sbjct: 179 gtggttggtgtccagcctccagatggagccccacgactccctcatcggcgtcca 126
Score = 46.1 bits (23), Expect = 0.021
Identities = 39/43 (90%), Gaps = 1/43 (2%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcg 537
|||||| |||||||| |||| || |||||||||||||||||||
Sbjct: 91 ctccatcaggtccac-tgcaacaagtcgccgtcgccgtcctcg 50
>dbj|AK064012.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-H01, full
insert sequence
Length = 1794
Score = 101 bits (51), Expect = 4e-019
Identities = 117/139 (84%)
Strand = Plus / Minus
Query: 342 ccagttggccgggatgacctggttggccaccagcgtcttgccggactcgttggtgatgcg 401
||||| |||||||||||| | |||||| || ||||||||||||||||||||| ||||||
Sbjct: 938 ccagtaggccgggatgacgttgttggcgacgagcgtcttgccggactcgttgcggatgcg 879
Query: 402 cagggagaagggcgcggcgaggcggtggccggagtccagccgccagatggacccccacga 461
| ||||||||| || ||| | |||| || |||||||| ||||||||| ||||||||
Sbjct: 878 gatggagaagggggcctggagcctgtggttggtgtccagcctccagatggagccccacga 819
Query: 462 ctcgcgcatcggcgtccac 480
||| | |||||||||||||
Sbjct: 818 ctccctcatcggcgtccac 800
Score = 93.7 bits (47), Expect = 1e-016
Identities = 68/75 (90%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
|||||| |||||||||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct: 767 ctccatcaggtccacctgcaccacgtcgccgtcgccgtcctcgtactccaccagcaccgc 708
Query: 555 caggtacaccgggtt 569
| |||||| |||||
Sbjct: 707 gaagtacacagggtt 693
>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1119_C05
Length = 126112
Score = 101 bits (51), Expect = 4e-019
Identities = 81/91 (89%)
Strand = Plus / Plus
Query: 490 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagc 549
|||| |||||||||||| |||||||| |||||||||||| ||||||| ||| |||||||
Sbjct: 74367 ttggactccatgaggtcgacctgcacgacgtcgccgtcgaggtcctcgtacttgacgagc 74426
Query: 550 accgccaggtacaccgggttggacccctcct 580
|| || | |||||||||||||||||||||||
Sbjct: 74427 acggcgaagtacaccgggttggacccctcct 74457
>gb|AACV01017536.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017536, whole
genome shotgun sequence
Length = 64614
Score = 101 bits (51), Expect = 4e-019
Identities = 81/91 (89%)
Strand = Plus / Plus
Query: 490 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagc 549
|||| |||||||||||| |||||||| |||||||||||| ||||||| ||| |||||||
Sbjct: 14055 ttggactccatgaggtcgacctgcacgacgtcgccgtcgaggtcctcgtacttgacgagc 14114
Query: 550 accgccaggtacaccgggttggacccctcct 580
|| || | |||||||||||||||||||||||
Sbjct: 14115 acggcgaagtacaccgggttggacccctcct 14145
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 101 bits (51), Expect = 4e-019
Identities = 81/91 (89%)
Strand = Plus / Plus
Query: 490 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagc 549
|||| |||||||||||| |||||||| |||||||||||| ||||||| ||| |||||||
Sbjct: 5978500 ttggactccatgaggtcgacctgcacgacgtcgccgtcgaggtcctcgtacttgacgagc 5978559
Query: 550 accgccaggtacaccgggttggacccctcct 580
|| || | |||||||||||||||||||||||
Sbjct: 5978560 acggcgaagtacaccgggttggacccctcct 5978590
>gb|CH401229.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000066
genomic scaffold, whole genome shotgun sequence
Length = 2575203
Score = 101 bits (51), Expect = 4e-019
Identities = 81/91 (89%)
Strand = Plus / Plus
Query: 490 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagc 549
|||| |||||||||||| |||||||| |||||||||||| ||||||| ||| |||||||
Sbjct: 997803 ttggactccatgaggtcgacctgcacgacgtcgccgtcgaggtcctcgtacttgacgagc 997862
Query: 550 accgccaggtacaccgggttggacccctcct 580
|| || | |||||||||||||||||||||||
Sbjct: 997863 acggcgaagtacaccgggttggacccctcct 997893
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 101 bits (51), Expect = 4e-019
Identities = 81/91 (89%)
Strand = Plus / Plus
Query: 490 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagc 549
|||| |||||||||||| |||||||| |||||||||||| ||||||| ||| |||||||
Sbjct: 6024506 ttggactccatgaggtcgacctgcacgacgtcgccgtcgaggtcctcgtacttgacgagc 6024565
Query: 550 accgccaggtacaccgggttggacccctcct 580
|| || | |||||||||||||||||||||||
Sbjct: 6024566 acggcgaagtacaccgggttggacccctcct 6024596
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 101 bits (51), Expect = 4e-019
Identities = 81/91 (89%)
Strand = Plus / Plus
Query: 490 ttggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagc 549
|||| |||||||||||| |||||||| |||||||||||| ||||||| ||| |||||||
Sbjct: 6210974 ttggactccatgaggtcgacctgcacgacgtcgccgtcgaggtcctcgtacttgacgagc 6211033
Query: 550 accgccaggtacaccgggttggacccctcct 580
|| || | |||||||||||||||||||||||
Sbjct: 6211034 acggcgaagtacaccgggttggacccctcct 6211064
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence
Length = 162241
Score = 99.6 bits (50), Expect = 2e-018
Identities = 80/90 (88%)
Strand = Plus / Minus
Query: 492 ggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcac 551
||||||| |||||||||||||| ||||||| |||||||||| |||| |||| || |||||
Sbjct: 104808 ggcctccttgaggtccacctgcgccacgtctccgtcgccgttctcgtactccaccagcac 104749
Query: 552 cgccaggtacaccgggttggacccctcctc 581
|||||||||||| ||| ||||||| |||||
Sbjct: 104748 cgccaggtacacggggctggacccttcctc 104719
Score = 81.8 bits (41), Expect = 4e-013
Identities = 140/173 (80%)
Strand = Plus / Plus
Query: 308 actggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggttgg 367
|||||| |||||| | |||| ||||||||| ||||| ||| ||||||||||| | ||
Sbjct: 93244 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 93303
Query: 368 ccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcggt 427
| | || |||||||||||||||||||||||||| |||||||||||| | || |||
Sbjct: 93304 cgatgagggtcttgccggactcgttggtgatgcggagggagaagggcccctgcagcgggt 93363
Query: 428 ggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|| || |||||||| ||| || || ||||||||||| | |||||||||||||
Sbjct: 93364 ggttggtgtccagcctccatatcgatccccacgactccctcatcggcgtccac 93416
Score = 79.8 bits (40), Expect = 2e-012
Identities = 142/176 (80%)
Strand = Plus / Minus
Query: 305 agtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggt 364
||||||||| || |||||||||| |||||||||| ||||||| |||||||| | |
Sbjct: 105001 agtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgtcgg 104942
Query: 365 tggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggc 424
||||||| |||||||||||| ||| | |||||| | |||||| ||||| ||||
Sbjct: 104941 gtgccaccaacgtcttgccggagtcgctccggatgcggatggagaatggcgcccgcaggc 104882
Query: 425 ggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
||||| ||||||||||| ||| | |||||||||||||| |||||||||||||||
Sbjct: 104881 ggtggttggagtccagcctccacaccgacccccacgactcccgcatcggcgtccac 104826
Score = 73.8 bits (37), Expect = 9e-011
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
|||||| |||||||||||||||||||| ||||| |||| |||| |||| || || | |||
Sbjct: 93461 ctccatcaggtccacctgcaccacgtccccgtccccgttctcgtactccaccagtatcgc 93520
Query: 555 caggtacaccgggttggaccc 575
|| |||||||||||| |||||
Sbjct: 93521 catgtacaccgggttcgaccc 93541
>dbj|AK070972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069H18, full
insert sequence
Length = 1019
Score = 99.6 bits (50), Expect = 2e-018
Identities = 80/90 (88%)
Strand = Plus / Minus
Query: 492 ggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcac 551
||||||| |||||||||||||| ||||||| |||||||||| |||| |||| || |||||
Sbjct: 697 ggcctccttgaggtccacctgcgccacgtctccgtcgccgttctcgtactccaccagcac 638
Query: 552 cgccaggtacaccgggttggacccctcctc 581
|||||||||||| ||| ||||||| |||||
Sbjct: 637 cgccaggtacacggggctggacccttcctc 608
Score = 79.8 bits (40), Expect = 2e-012
Identities = 142/176 (80%)
Strand = Plus / Minus
Query: 305 agtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggt 364
||||||||| || |||||||||| |||||||||| ||||||| |||||||| | |
Sbjct: 890 agtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgtcgg 831
Query: 365 tggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggc 424
||||||| |||||||||||| ||| | |||||| | |||||| ||||| ||||
Sbjct: 830 gtgccaccaacgtcttgccggagtcgctccggatgcggatggagaatggcgcccgcaggc 771
Query: 425 ggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
||||| ||||||||||| ||| | |||||||||||||| |||||||||||||||
Sbjct: 770 ggtggttggagtccagcctccacaccgacccccacgactcccgcatcggcgtccac 715
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNAb0079B22, from chromosome 3, complete sequence
Length = 156933
Score = 99.6 bits (50), Expect = 2e-018
Identities = 80/90 (88%)
Strand = Plus / Plus
Query: 492 ggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcac 551
||||||| |||||||||||||| ||||||| |||||||||| |||| |||| || |||||
Sbjct: 91858 ggcctccttgaggtccacctgcgccacgtctccgtcgccgttctcgtactccaccagcac 91917
Query: 552 cgccaggtacaccgggttggacccctcctc 581
|||||||||||| ||| ||||||| |||||
Sbjct: 91918 cgccaggtacacggggctggacccttcctc 91947
Score = 81.8 bits (41), Expect = 4e-013
Identities = 140/173 (80%)
Strand = Plus / Minus
Query: 308 actggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggttgg 367
|||||| |||||| | |||| ||||||||| ||||| ||| ||||||||||| | ||
Sbjct: 103422 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 103363
Query: 368 ccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcggt 427
| | || |||||||||||||||||||||||||| |||||||||||| | || |||
Sbjct: 103362 cgatgagggtcttgccggactcgttggtgatgcggagggagaagggcccctgcagcgggt 103303
Query: 428 ggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|| || |||||||| ||| || || ||||||||||| | |||||||||||||
Sbjct: 103302 ggttggtgtccagcctccatatcgatccccacgactccctcatcggcgtccac 103250
Score = 79.8 bits (40), Expect = 2e-012
Identities = 142/176 (80%)
Strand = Plus / Plus
Query: 305 agtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggt 364
||||||||| || |||||||||| |||||||||| ||||||| |||||||| | |
Sbjct: 91665 agtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgtcgg 91724
Query: 365 tggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggc 424
||||||| |||||||||||| ||| | |||||| | |||||| ||||| ||||
Sbjct: 91725 gtgccaccaacgtcttgccggagtcgctccggatgcggatggagaatggcgcccgcaggc 91784
Query: 425 ggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
||||| ||||||||||| ||| | |||||||||||||| |||||||||||||||
Sbjct: 91785 ggtggttggagtccagcctccacaccgacccccacgactcccgcatcggcgtccac 91840
Score = 73.8 bits (37), Expect = 9e-011
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
|||||| |||||||||||||||||||| ||||| |||| |||| |||| || || | |||
Sbjct: 103205 ctccatcaggtccacctgcaccacgtccccgtccccgttctcgtactccaccagtatcgc 103146
Query: 555 caggtacaccgggttggaccc 575
|| |||||||||||| |||||
Sbjct: 103145 catgtacaccgggttcgaccc 103125
>ref|NT_107183.1| Oryza sativa (japonica cultivar-group)
Length = 1680144
Score = 99.6 bits (50), Expect = 2e-018
Identities = 80/90 (88%)
Strand = Plus / Plus
Query: 492 ggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcac 551
||||||| |||||||||||||| ||||||| |||||||||| |||| |||| || |||||
Sbjct: 157858 ggcctccttgaggtccacctgcgccacgtctccgtcgccgttctcgtactccaccagcac 157917
Query: 552 cgccaggtacaccgggttggacccctcctc 581
|||||||||||| ||| ||||||| |||||
Sbjct: 157918 cgccaggtacacggggctggacccttcctc 157947
Score = 81.8 bits (41), Expect = 4e-013
Identities = 140/173 (80%)
Strand = Plus / Minus
Query: 308 actggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggttgg 367
|||||| |||||| | |||| ||||||||| ||||| ||| ||||||||||| | ||
Sbjct: 169422 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 169363
Query: 368 ccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcggt 427
| | || |||||||||||||||||||||||||| |||||||||||| | || |||
Sbjct: 169362 cgatgagggtcttgccggactcgttggtgatgcggagggagaagggcccctgcagcgggt 169303
Query: 428 ggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|| || |||||||| ||| || || ||||||||||| | |||||||||||||
Sbjct: 169302 ggttggtgtccagcctccatatcgatccccacgactccctcatcggcgtccac 169250
Score = 79.8 bits (40), Expect = 2e-012
Identities = 142/176 (80%)
Strand = Plus / Plus
Query: 305 agtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggt 364
||||||||| || |||||||||| |||||||||| ||||||| |||||||| | |
Sbjct: 157665 agtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgtcgg 157724
Query: 365 tggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggc 424
||||||| |||||||||||| ||| | |||||| | |||||| ||||| ||||
Sbjct: 157725 gtgccaccaacgtcttgccggagtcgctccggatgcggatggagaatggcgcccgcaggc 157784
Query: 425 ggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
||||| ||||||||||| ||| | |||||||||||||| |||||||||||||||
Sbjct: 157785 ggtggttggagtccagcctccacaccgacccccacgactcccgcatcggcgtccac 157840
Score = 73.8 bits (37), Expect = 9e-011
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
|||||| |||||||||||||||||||| ||||| |||| |||| |||| || || | |||
Sbjct: 169205 ctccatcaggtccacctgcaccacgtccccgtccccgttctcgtactccaccagtatcgc 169146
Query: 555 caggtacaccgggttggaccc 575
|| |||||||||||| |||||
Sbjct: 169145 catgtacaccgggttcgaccc 169125
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
complete sequence
Length = 36192742
Score = 99.6 bits (50), Expect = 2e-018
Identities = 80/90 (88%)
Strand = Plus / Plus
Query: 492 ggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcac 551
||||||| |||||||||||||| ||||||| |||||||||| |||| |||| || |||||
Sbjct: 157858 ggcctccttgaggtccacctgcgccacgtctccgtcgccgttctcgtactccaccagcac 157917
Query: 552 cgccaggtacaccgggttggacccctcctc 581
|||||||||||| ||| ||||||| |||||
Sbjct: 157918 cgccaggtacacggggctggacccttcctc 157947
Score = 81.8 bits (41), Expect = 4e-013
Identities = 140/173 (80%)
Strand = Plus / Minus
Query: 308 actggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggttgg 367
|||||| |||||| | |||| ||||||||| ||||| ||| ||||||||||| | ||
Sbjct: 169422 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 169363
Query: 368 ccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcggt 427
| | || |||||||||||||||||||||||||| |||||||||||| | || |||
Sbjct: 169362 cgatgagggtcttgccggactcgttggtgatgcggagggagaagggcccctgcagcgggt 169303
Query: 428 ggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|| || |||||||| ||| || || ||||||||||| | |||||||||||||
Sbjct: 169302 ggttggtgtccagcctccatatcgatccccacgactccctcatcggcgtccac 169250
Score = 79.8 bits (40), Expect = 2e-012
Identities = 142/176 (80%)
Strand = Plus / Plus
Query: 305 agtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggt 364
||||||||| || |||||||||| |||||||||| ||||||| |||||||| | |
Sbjct: 157665 agtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgtcgg 157724
Query: 365 tggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggc 424
||||||| |||||||||||| ||| | |||||| | |||||| ||||| ||||
Sbjct: 157725 gtgccaccaacgtcttgccggagtcgctccggatgcggatggagaatggcgcccgcaggc 157784
Query: 425 ggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
||||| ||||||||||| ||| | |||||||||||||| |||||||||||||||
Sbjct: 157785 ggtggttggagtccagcctccacaccgacccccacgactcccgcatcggcgtccac 157840
Score = 73.8 bits (37), Expect = 9e-011
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
|||||| |||||||||||||||||||| ||||| |||| |||| |||| || || | |||
Sbjct: 169205 ctccatcaggtccacctgcaccacgtccccgtccccgttctcgtactccaccagtatcgc 169146
Query: 555 caggtacaccgggttggaccc 575
|| |||||||||||| |||||
Sbjct: 169145 catgtacaccgggttcgaccc 169125
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 99.6 bits (50), Expect = 2e-018
Identities = 80/90 (88%)
Strand = Plus / Plus
Query: 492 ggcctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcac 551
||||||| |||||||||||||| ||||||| |||||||||| |||| |||| || |||||
Sbjct: 157858 ggcctccttgaggtccacctgcgccacgtctccgtcgccgttctcgtactccaccagcac 157917
Query: 552 cgccaggtacaccgggttggacccctcctc 581
|||||||||||| ||| ||||||| |||||
Sbjct: 157918 cgccaggtacacggggctggacccttcctc 157947
Score = 81.8 bits (41), Expect = 4e-013
Identities = 140/173 (80%)
Strand = Plus / Minus
Query: 308 actggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggttgg 367
|||||| |||||| | |||| ||||||||| ||||| ||| ||||||||||| | ||
Sbjct: 169422 actggacgatggagctgtagacggtgttgggctgccagtcggcggggatgacctgatcgg 169363
Query: 368 ccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggcggt 427
| | || |||||||||||||||||||||||||| |||||||||||| | || |||
Sbjct: 169362 cgatgagggtcttgccggactcgttggtgatgcggagggagaagggcccctgcagcgggt 169303
Query: 428 ggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
|| || |||||||| ||| || || ||||||||||| | |||||||||||||
Sbjct: 169302 ggttggtgtccagcctccatatcgatccccacgactccctcatcggcgtccac 169250
Score = 79.8 bits (40), Expect = 2e-012
Identities = 142/176 (80%)
Strand = Plus / Plus
Query: 305 agtactggatgatggaacggtagtaggtgttgggaacccagttggccgggatgacctggt 364
||||||||| || |||||||||| |||||||||| ||||||| |||||||| | |
Sbjct: 157665 agtactggacgaaggaacggtagaaggtgttgggcgtccagttgagggggatgacgtcgg 157724
Query: 365 tggccaccagcgtcttgccggactcgttggtgatgcgcagggagaagggcgcggcgaggc 424
||||||| |||||||||||| ||| | |||||| | |||||| ||||| ||||
Sbjct: 157725 gtgccaccaacgtcttgccggagtcgctccggatgcggatggagaatggcgcccgcaggc 157784
Query: 425 ggtggccggagtccagccgccagatggacccccacgactcgcgcatcggcgtccac 480
||||| ||||||||||| ||| | |||||||||||||| |||||||||||||||
Sbjct: 157785 ggtggttggagtccagcctccacaccgacccccacgactcccgcatcggcgtccac 157840
Score = 73.8 bits (37), Expect = 9e-011
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 495 ctccatgaggtccacctgcaccacgtcgccgtcgccgtcctcgaactcgacgagcaccgc 554
|||||| |||||||||||||||||||| ||||| |||| |||| |||| || || | |||
Sbjct: 169205 ctccatcaggtccacctgcaccacgtccccgtccccgttctcgtactccaccagtatcgc 169146
Query: 555 caggtacaccgggttggaccc 575
|| |||||||||||| |||||
Sbjct: 169145 catgtacaccgggttcgaccc 169125
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,224,871
Number of Sequences: 438736
Number of extensions: 1224871
Number of successful extensions: 58162
Number of sequences better than 0.5: 157
Number of HSP's better than 0.5 without gapping: 161
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 54533
Number of HSP's gapped (non-prelim): 3574
length of query: 582
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 561
effective length of database: 2,791,206,460
effective search space: 1565866824060
effective search space used: 1565866824060
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)