BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161200.2.1
(845 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB000870.1|CB000870 S345K_E05 Rice cold stress germinati... 246 2e-062
gb|CB644828.1|CB644828 OSJNEb06D08.r OSJNEb Oryza sativa (j... 246 2e-062
gb|CB648856.1|CB648856 OSJNEb12H11.r OSJNEb Oryza sativa (j... 246 2e-062
gb|CB664661.1|CB664661 OSJNEd10I06.r OSJNEd Oryza sativa (j... 246 2e-062
gb|CB670083.1|CB670083 OSJNEe02P22.r OSJNEe Oryza sativa (j... 246 2e-062
gb|CB670711.1|CB670711 OSJNEe03O24.r OSJNEe Oryza sativa (j... 246 2e-062
dbj|AK070408.1| Oryza sativa (japonica cultivar-group) cDNA... 246 2e-062
dbj|AK104929.1| Oryza sativa (japonica cultivar-group) cDNA... 246 2e-062
gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 ... 246 2e-062
gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC O... 246 2e-062
gb|AACV01007878.1| Oryza sativa (japonica cultivar-group) c... 246 2e-062
ref|XM_469632.1| Oryza sativa (japonica cultivar-group), mRNA 246 2e-062
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 246 2e-062
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 246 2e-062
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 246 2e-062
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 246 2e-062
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 246 2e-062
gb|C25232.1|C25232 C25232 Rice shoot Oryza sativa (japonica... 244 7e-062
gb|AU095892.1|AU095892 AU095892 Rice green shoot Oryza sati... 188 3e-045
gb|CA999085.1|CA999085 S234M_H10 Rice cold stress germinati... 168 3e-039
gb|CB644827.1|CB644827 OSJNEb06D08.f OSJNEb Oryza sativa (j... 163 2e-037
gb|CB637093.1|CB637093 OSJNEa03E10.r OSJNEa Oryza sativa (j... 153 2e-034
gb|CF325734.1|CF325734 JMT1--04-B01.g1 AtJMT-overexpressing... 109 2e-021
gb|AU093799.1|AU093799 AU093799 Rice panicle at flowering s... 100 2e-018
gb|CX728909.1|CX728909 OSJNEf15N02.r OSJNEf Oryza sativa (j... 72 5e-010
dbj|AK102748.1| Oryza sativa (japonica cultivar-group) cDNA... 66 3e-008
gb|AC137547.2| Oryza sativa (japonica cultivar-group) chrom... 66 3e-008
gb|AACV01006539.1| Oryza sativa (japonica cultivar-group) c... 66 3e-008
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 66 3e-008
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 66 3e-008
gb|CB685436.1|CB685436 OSJNEf15N02.f OSJNEf Oryza sativa (j... 64 1e-007
gb|CV721629.1|CV721629 YBH--04-M10.b1 Rice before heading y... 64 1e-007
gb|CV721775.1|CV721775 YBH--05-E12.b1 Rice before heading y... 64 1e-007
gb|CV722211.1|CV722211 YBH--06-N14.b1 Rice before heading y... 64 1e-007
gb|AU093744.1|AU093744 AU093744 Rice panicle at flowering s... 62 5e-007
gb|AU075536.1|AU075536 AU075536 Rice shoot Oryza sativa (ja... 60 2e-006
gb|AU183969.1|AU183969 AU183969 Rice root Oryza sativa (jap... 44 0.12
dbj|AK120093.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.12
ref|NT_107227.1| Oryza sativa (japonica cultivar-group) 44 0.12
gb|AC132489.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.12
gb|AACV01002848.1| Oryza sativa (japonica cultivar-group) c... 44 0.12
gb|AACV01009588.1| Oryza sativa (japonica cultivar-group) c... 44 0.12
gb|AACV01011424.1| Oryza sativa (japonica cultivar-group) c... 44 0.12
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 44 0.12
ref|NM_190291.1| Oryza sativa (japonica cultivar-group), p... 44 0.12
ref|XM_472267.1| Oryza sativa (japonica cultivar-group), p... 44 0.12
ref|NT_079858.2| Oryza sativa (japonica cultivar-group) 44 0.12
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 44 0.12
dbj|AP003418.2| Oryza sativa (japonica cultivar-group) geno... 44 0.12
gb|CH401195.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.12
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.12
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.12
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.12
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.12
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.12
emb|AL731601.3|OSJN00245 Oryza sativa genomic DNA, chromoso... 44 0.12
emb|AL731619.3|OSJN00267 Oryza sativa genomic DNA, chromoso... 44 0.12
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 44 0.12
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 44 0.12
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 44 0.12
dbj|AP004342.5| Oryza sativa (japonica cultivar-group) geno... 42 0.48
gb|AC109595.2| Oryza sativa (japonica cultivar-group) chrom... 42 0.48
gb|AACV01002345.1| Oryza sativa (japonica cultivar-group) c... 42 0.48
gb|AACV01015028.1| Oryza sativa (japonica cultivar-group) c... 42 0.48
ref|NM_191224.1| Oryza sativa (japonica cultivar-group), p... 42 0.48
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 42 0.48
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 42 0.48
dbj|AP003076.3| Oryza sativa (japonica cultivar-group) geno... 42 0.48
gb|CH401218.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.48
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.48
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 42 0.48
>gb|CB000870.1|CB000870 S345K_E05 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 516
Score = 246 bits (124), Expect = 2e-062
Identities = 239/278 (85%)
Strand = Plus / Minus
Query: 471 gaaatcagtgctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtag 530
||||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||||
Sbjct: 343 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 284
Query: 531 ttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccaccattgctccaaca 590
|| || |||||||||||| |||| ||| |||| ||||||||||| |||| |||||||| |
Sbjct: 283 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 224
Query: 591 aggatgttagggtttgccttcttcgtgtccctccatttgtaacctcctttgcatccatac 650
||||| ||||| |||| |||||| || ||||||||||| | |||||||||||||||||
Sbjct: 223 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 164
Query: 651 ttgacgccgttatgaggtatcgaggcacctctgtggtgagggcgcttcgggtacttgttt 710
||||| || |||||||| || || ||||||||||| |||| |||||| ||||||||||||
Sbjct: 163 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 104
Query: 711 ncgaaacccacancgtagctcatcttcaatgggttctt 748
| ||||||||| ||||||||||||||| |||||||||
Sbjct: 103 ccaaaacccacaacgtagctcatcttcagtgggttctt 66
Score = 58.0 bits (29), Expect = 8e-006
Identities = 83/101 (82%)
Strand = Plus / Minus
Query: 339 atattcagaggtctgtctctctatggtttccatgctgatggcggcggcggcggtgtcgga 398
|||||||| | |||| |||| |||||||||| ||||| || || || || || || |||
Sbjct: 472 atattcagcgatctgactcttcatggtttccaagctgacggtggaggtgggggagttgga 413
Query: 399 aacattggagggatcgcagagaagatggtgttcttgtcgat 439
||||| ||||| | |||||||||||||||||||| |||||
Sbjct: 412 aacatcggaggaactgcagagaagatggtgttcttatcgat 372
>gb|CB644828.1|CB644828 OSJNEb06D08.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb06D08 3', mRNA sequence
Length = 811
Score = 246 bits (124), Expect = 2e-062
Identities = 239/278 (85%)
Strand = Plus / Plus
Query: 471 gaaatcagtgctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtag 530
||||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||||
Sbjct: 483 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 542
Query: 531 ttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccaccattgctccaaca 590
|| || |||||||||||| |||| ||| |||| ||||||||||| |||| |||||||| |
Sbjct: 543 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 602
Query: 591 aggatgttagggtttgccttcttcgtgtccctccatttgtaacctcctttgcatccatac 650
||||| ||||| |||| |||||| || ||||||||||| | |||||||||||||||||
Sbjct: 603 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 662
Query: 651 ttgacgccgttatgaggtatcgaggcacctctgtggtgagggcgcttcgggtacttgttt 710
||||| || |||||||| || || ||||||||||| |||| |||||| ||||||||||||
Sbjct: 663 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 722
Query: 711 ncgaaacccacancgtagctcatcttcaatgggttctt 748
| ||||||||| ||||||||||||||| |||||||||
Sbjct: 723 ccaaaacccacaacgtagctcatcttcagtgggttctt 760
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 217 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 276
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 277 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 315
Score = 58.0 bits (29), Expect = 8e-006
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 339 atattcagaggtctgtctctctatggtttccatgctgatggcggcggcggcggtgtcgga 398
|||||||| | |||| |||| |||||||||| ||||| || || || || || || |||
Sbjct: 354 atattcagcgatctgactcttcatggtttccaagctgacggtggaggtgggggagttgga 413
Query: 399 aacattggagggatcgcagagaagatggtgttcttgtcgat 439
||||| ||||| | |||||||||||||||||||| |||||
Sbjct: 414 aacatcggaggaactgcagagaagatggtgttcttatcgat 454
Score = 46.1 bits (23), Expect = 0.031
Identities = 57/66 (86%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 54 aaagtcactcctataacaa--tttgtaaaggtacaatttctacaaaaaataacttcacac 111
|||||||||||||||| | ||| ||||||| | ||||||||||||| ||||||||||
Sbjct: 81 aaagtcactcctataaaacggtttataaaggttccatttctacaaaaag-aacttcacac 139
Query: 112 atgagc 117
||||||
Sbjct: 140 atgagc 145
>gb|CB648856.1|CB648856 OSJNEb12H11.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12H11 3', mRNA sequence
Length = 791
Score = 246 bits (124), Expect = 2e-062
Identities = 239/278 (85%)
Strand = Plus / Plus
Query: 471 gaaatcagtgctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtag 530
||||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||||
Sbjct: 460 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 519
Query: 531 ttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccaccattgctccaaca 590
|| || |||||||||||| |||| ||| |||| ||||||||||| |||| |||||||| |
Sbjct: 520 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 579
Query: 591 aggatgttagggtttgccttcttcgtgtccctccatttgtaacctcctttgcatccatac 650
||||| ||||| |||| |||||| || ||||||||||| | |||||||||||||||||
Sbjct: 580 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 639
Query: 651 ttgacgccgttatgaggtatcgaggcacctctgtggtgagggcgcttcgggtacttgttt 710
||||| || |||||||| || || ||||||||||| |||| |||||| ||||||||||||
Sbjct: 640 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 699
Query: 711 ncgaaacccacancgtagctcatcttcaatgggttctt 748
| ||||||||| ||||||||||||||| |||||||||
Sbjct: 700 ccaaaacccacaacgtagctcatcttcagtgggttctt 737
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 194 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 253
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 254 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 292
Score = 58.0 bits (29), Expect = 8e-006
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 339 atattcagaggtctgtctctctatggtttccatgctgatggcggcggcggcggtgtcgga 398
|||||||| | |||| |||| |||||||||| ||||| || || || || || || |||
Sbjct: 331 atattcagcgatctgactcttcatggtttccaagctgacggtggaggtgggggagttgga 390
Query: 399 aacattggagggatcgcagagaagatggtgttcttgtcgat 439
||||| ||||| | |||||||||||||||||||| |||||
Sbjct: 391 aacatcggaggaactgcagagaagatggtgttcttatcgat 431
>gb|CB664661.1|CB664661 OSJNEd10I06.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd10I06 3', mRNA sequence
Length = 825
Score = 246 bits (124), Expect = 2e-062
Identities = 239/278 (85%)
Strand = Plus / Plus
Query: 471 gaaatcagtgctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtag 530
||||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||||
Sbjct: 398 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 457
Query: 531 ttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccaccattgctccaaca 590
|| || |||||||||||| |||| ||| |||| ||||||||||| |||| |||||||| |
Sbjct: 458 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 517
Query: 591 aggatgttagggtttgccttcttcgtgtccctccatttgtaacctcctttgcatccatac 650
||||| ||||| |||| |||||| || ||||||||||| | |||||||||||||||||
Sbjct: 518 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 577
Query: 651 ttgacgccgttatgaggtatcgaggcacctctgtggtgagggcgcttcgggtacttgttt 710
||||| || |||||||| || || ||||||||||| |||| |||||| ||||||||||||
Sbjct: 578 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 637
Query: 711 ncgaaacccacancgtagctcatcttcaatgggttctt 748
| ||||||||| ||||||||||||||| |||||||||
Sbjct: 638 ccaaaacccacaacgtagctcatcttcagtgggttctt 675
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 132 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 191
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 192 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 230
Score = 58.0 bits (29), Expect = 8e-006
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 339 atattcagaggtctgtctctctatggtttccatgctgatggcggcggcggcggtgtcgga 398
|||||||| | |||| |||| |||||||||| ||||| || || || || || || |||
Sbjct: 269 atattcagcgatctgactcttcatggtttccaagctgacggtggaggtgggggagttgga 328
Query: 399 aacattggagggatcgcagagaagatggtgttcttgtcgat 439
||||| ||||| | |||||||||||||||||||| |||||
Sbjct: 329 aacatcggaggaactgcagagaagatggtgttcttatcgat 369
>gb|CB670083.1|CB670083 OSJNEe02P22.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe02P22 3', mRNA sequence
Length = 787
Score = 246 bits (124), Expect = 2e-062
Identities = 239/278 (85%)
Strand = Plus / Plus
Query: 471 gaaatcagtgctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtag 530
||||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||||
Sbjct: 472 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 531
Query: 531 ttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccaccattgctccaaca 590
|| || |||||||||||| |||| ||| |||| ||||||||||| |||| |||||||| |
Sbjct: 532 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 591
Query: 591 aggatgttagggtttgccttcttcgtgtccctccatttgtaacctcctttgcatccatac 650
||||| ||||| |||| |||||| || ||||||||||| | |||||||||||||||||
Sbjct: 592 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 651
Query: 651 ttgacgccgttatgaggtatcgaggcacctctgtggtgagggcgcttcgggtacttgttt 710
||||| || |||||||| || || ||||||||||| |||| |||||| ||||||||||||
Sbjct: 652 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 711
Query: 711 ncgaaacccacancgtagctcatcttcaatgggttctt 748
| ||||||||| ||||||||||||||| |||||||||
Sbjct: 712 ccaaaacccacaacgtagctcatcttcagtgggttctt 749
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 206 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 265
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 266 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 304
Score = 58.0 bits (29), Expect = 8e-006
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 339 atattcagaggtctgtctctctatggtttccatgctgatggcggcggcggcggtgtcgga 398
|||||||| | |||| |||| |||||||||| ||||| || || || || || || |||
Sbjct: 343 atattcagcgatctgactcttcatggtttccaagctgacggtggaggtgggggagttgga 402
Query: 399 aacattggagggatcgcagagaagatggtgttcttgtcgat 439
||||| ||||| | |||||||||||||||||||| |||||
Sbjct: 403 aacatcggaggaactgcagagaagatggtgttcttatcgat 443
>gb|CB670711.1|CB670711 OSJNEe03O24.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe03O24 3', mRNA sequence
Length = 779
Score = 246 bits (124), Expect = 2e-062
Identities = 239/278 (85%)
Strand = Plus / Plus
Query: 471 gaaatcagtgctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtag 530
||||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||||
Sbjct: 447 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 506
Query: 531 ttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccaccattgctccaaca 590
|| || |||||||||||| |||| ||| |||| ||||||||||| |||| |||||||| |
Sbjct: 507 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 566
Query: 591 aggatgttagggtttgccttcttcgtgtccctccatttgtaacctcctttgcatccatac 650
||||| ||||| |||| |||||| || ||||||||||| | |||||||||||||||||
Sbjct: 567 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 626
Query: 651 ttgacgccgttatgaggtatcgaggcacctctgtggtgagggcgcttcgggtacttgttt 710
||||| || |||||||| || || ||||||||||| |||| |||||| ||||||||||||
Sbjct: 627 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 686
Query: 711 ncgaaacccacancgtagctcatcttcaatgggttctt 748
| ||||||||| ||||||||||||||| |||||||||
Sbjct: 687 ccaaaacccacaacgtagctcatcttcagtgggttctt 724
Score = 56.0 bits (28), Expect = 3e-005
Identities = 84/100 (84%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 189 gacagaggattttatactgatctgtcataatggtacagaaa-tagaagctctataagctt 247
|||||| || ||||||| |||||| |||| || |||||||| |||| ||||| |||||||
Sbjct: 181 gacagatgaatttataccgatctggcatactgatacagaaaatagaggctctgtaagctt 240
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| |||||| ||| || |||||||||||||||
Sbjct: 241 atgttgtctgctttc-tgtatgtgtcctttgctgtaccaa 279
Score = 50.1 bits (25), Expect = 0.002
Identities = 82/101 (81%)
Strand = Plus / Plus
Query: 339 atattcagaggtctgtctctctatggtttccatgctgatggcggcggcggcggtgtcgga 398
|||||||| | |||| |||| |||||||||| ||||| || || || || || || |||
Sbjct: 318 atattcagcgatctgactcttcatggtttccaagctgacggtggaggtgggggagttgga 377
Query: 399 aacattggagggatcgcagagaagatggtgttcttgtcgat 439
||||| ||||| | ||| |||||||||||||||| |||||
Sbjct: 378 aacatcggaggaactgcaaagaagatggtgttcttatcgat 418
>dbj|AK070408.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054M04, full
insert sequence
Length = 2397
Score = 246 bits (124), Expect = 2e-062
Identities = 239/278 (85%)
Strand = Plus / Minus
Query: 471 gaaatcagtgctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtag 530
||||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||||
Sbjct: 1962 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 1903
Query: 531 ttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccaccattgctccaaca 590
|| || |||||||||||| |||| ||| |||| ||||||||||| |||| |||||||| |
Sbjct: 1902 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 1843
Query: 591 aggatgttagggtttgccttcttcgtgtccctccatttgtaacctcctttgcatccatac 650
||||| ||||| |||| |||||| || ||||||||||| | |||||||||||||||||
Sbjct: 1842 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 1783
Query: 651 ttgacgccgttatgaggtatcgaggcacctctgtggtgagggcgcttcgggtacttgttt 710
||||| || |||||||| || || ||||||||||| |||| |||||| ||||||||||||
Sbjct: 1782 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 1723
Query: 711 ncgaaacccacancgtagctcatcttcaatgggttctt 748
| ||||||||| ||||||||||||||| |||||||||
Sbjct: 1722 ccaaaacccacaacgtagctcatcttcagtgggttctt 1685
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 2228 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 2169
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 2168 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 2130
Score = 58.0 bits (29), Expect = 8e-006
Identities = 83/101 (82%)
Strand = Plus / Minus
Query: 339 atattcagaggtctgtctctctatggtttccatgctgatggcggcggcggcggtgtcgga 398
|||||||| | |||| |||| |||||||||| ||||| || || || || || || |||
Sbjct: 2091 atattcagcgatctgactcttcatggtttccaagctgacggtggaggtgggggagttgga 2032
Query: 399 aacattggagggatcgcagagaagatggtgttcttgtcgat 439
||||| ||||| | |||||||||||||||||||| |||||
Sbjct: 2031 aacatcggaggaactgcagagaagatggtgttcttatcgat 1991
>dbj|AK104929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D09, full
insert sequence
Length = 1963
Score = 246 bits (124), Expect = 2e-062
Identities = 239/278 (85%)
Strand = Plus / Minus
Query: 471 gaaatcagtgctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtag 530
||||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||||
Sbjct: 1537 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 1478
Query: 531 ttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccaccattgctccaaca 590
|| || |||||||||||| |||| ||| |||| ||||||||||| |||| |||||||| |
Sbjct: 1477 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 1418
Query: 591 aggatgttagggtttgccttcttcgtgtccctccatttgtaacctcctttgcatccatac 650
||||| ||||| |||| |||||| || ||||||||||| | |||||||||||||||||
Sbjct: 1417 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 1358
Query: 651 ttgacgccgttatgaggtatcgaggcacctctgtggtgagggcgcttcgggtacttgttt 710
||||| || |||||||| || || ||||||||||| |||| |||||| ||||||||||||
Sbjct: 1357 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 1298
Query: 711 ncgaaacccacancgtagctcatcttcaatgggttctt 748
| ||||||||| ||||||||||||||| |||||||||
Sbjct: 1297 ccaaaacccacaacgtagctcatcttcagtgggttctt 1260
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 1803 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 1744
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 1743 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 1705
Score = 58.0 bits (29), Expect = 8e-006
Identities = 83/101 (82%)
Strand = Plus / Minus
Query: 339 atattcagaggtctgtctctctatggtttccatgctgatggcggcggcggcggtgtcgga 398
|||||||| | |||| |||| |||||||||| ||||| || || || || || || |||
Sbjct: 1666 atattcagcgatctgactcttcatggtttccaagctgacggtggaggtgggggagttgga 1607
Query: 399 aacattggagggatcgcagagaagatggtgttcttgtcgat 439
||||| ||||| | |||||||||||||||||||| |||||
Sbjct: 1606 aacatcggaggaactgcagagaagatggtgttcttatcgat 1566
>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete
sequence
Length = 139946
Score = 246 bits (124), Expect = 2e-062
Identities = 239/278 (85%)
Strand = Plus / Plus
Query: 471 gaaatcagtgctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtag 530
||||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||||
Sbjct: 55770 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 55829
Query: 531 ttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccaccattgctccaaca 590
|| || |||||||||||| |||| ||| |||| ||||||||||| |||| |||||||| |
Sbjct: 55830 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 55889
Query: 591 aggatgttagggtttgccttcttcgtgtccctccatttgtaacctcctttgcatccatac 650
||||| ||||| |||| |||||| || ||||||||||| | |||||||||||||||||
Sbjct: 55890 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 55949
Query: 651 ttgacgccgttatgaggtatcgaggcacctctgtggtgagggcgcttcgggtacttgttt 710
||||| || |||||||| || || ||||||||||| |||| |||||| ||||||||||||
Sbjct: 55950 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 56009
Query: 711 ncgaaacccacancgtagctcatcttcaatgggttctt 748
| ||||||||| ||||||||||||||| |||||||||
Sbjct: 56010 ccaaaacccacaacgtagctcatcttcagtgggttctt 56047
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 55504 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 55563
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 55564 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 55602
Score = 58.0 bits (29), Expect = 8e-006
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 339 atattcagaggtctgtctctctatggtttccatgctgatggcggcggcggcggtgtcgga 398
|||||||| | |||| |||| |||||||||| ||||| || || || || || || |||
Sbjct: 55641 atattcagcgatctgactcttcatggtttccaagctgacggtggaggtgggggagttgga 55700
Query: 399 aacattggagggatcgcagagaagatggtgttcttgtcgat 439
||||| ||||| | |||||||||||||||||||| |||||
Sbjct: 55701 aacatcggaggaactgcagagaagatggtgttcttatcgat 55741
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete
sequence
Length = 159661
Score = 246 bits (124), Expect = 2e-062
Identities = 239/278 (85%)
Strand = Plus / Minus
Query: 471 gaaatcagtgctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtag 530
||||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||||
Sbjct: 120777 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 120718
Query: 531 ttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccaccattgctccaaca 590
|| || |||||||||||| |||| ||| |||| ||||||||||| |||| |||||||| |
Sbjct: 120717 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 120658
Query: 591 aggatgttagggtttgccttcttcgtgtccctccatttgtaacctcctttgcatccatac 650
||||| ||||| |||| |||||| || ||||||||||| | |||||||||||||||||
Sbjct: 120657 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 120598
Query: 651 ttgacgccgttatgaggtatcgaggcacctctgtggtgagggcgcttcgggtacttgttt 710
||||| || |||||||| || || ||||||||||| |||| |||||| ||||||||||||
Sbjct: 120597 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 120538
Query: 711 ncgaaacccacancgtagctcatcttcaatgggttctt 748
| ||||||||| ||||||||||||||| |||||||||
Sbjct: 120537 ccaaaacccacaacgtagctcatcttcagtgggttctt 120500
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 121043 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 120984
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 120983 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 120945
Score = 58.0 bits (29), Expect = 8e-006
Identities = 83/101 (82%)
Strand = Plus / Minus
Query: 339 atattcagaggtctgtctctctatggtttccatgctgatggcggcggcggcggtgtcgga 398
|||||||| | |||| |||| |||||||||| ||||| || || || || || || |||
Sbjct: 120906 atattcagcgatctgactcttcatggtttccaagctgacggtggaggtgggggagttgga 120847
Query: 399 aacattggagggatcgcagagaagatggtgttcttgtcgat 439
||||| ||||| | |||||||||||||||||||| |||||
Sbjct: 120846 aacatcggaggaactgcagagaagatggtgttcttatcgat 120806
>gb|AACV01007878.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007878, whole
genome shotgun sequence
Length = 25339
Score = 246 bits (124), Expect = 2e-062
Identities = 239/278 (85%)
Strand = Plus / Plus
Query: 471 gaaatcagtgctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtag 530
||||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||||
Sbjct: 4868 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 4927
Query: 531 ttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccaccattgctccaaca 590
|| || |||||||||||| |||| ||| |||| ||||||||||| |||| |||||||| |
Sbjct: 4928 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 4987
Query: 591 aggatgttagggtttgccttcttcgtgtccctccatttgtaacctcctttgcatccatac 650
||||| ||||| |||| |||||| || ||||||||||| | |||||||||||||||||
Sbjct: 4988 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 5047
Query: 651 ttgacgccgttatgaggtatcgaggcacctctgtggtgagggcgcttcgggtacttgttt 710
||||| || |||||||| || || ||||||||||| |||| |||||| ||||||||||||
Sbjct: 5048 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 5107
Query: 711 ncgaaacccacancgtagctcatcttcaatgggttctt 748
| ||||||||| ||||||||||||||| |||||||||
Sbjct: 5108 ccaaaacccacaacgtagctcatcttcagtgggttctt 5145
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 4602 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 4661
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 4662 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 4700
Score = 58.0 bits (29), Expect = 8e-006
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 339 atattcagaggtctgtctctctatggtttccatgctgatggcggcggcggcggtgtcgga 398
|||||||| | |||| |||| |||||||||| ||||| || || || || || || |||
Sbjct: 4739 atattcagcgatctgactcttcatggtttccaagctgacggtggaggtgggggagttgga 4798
Query: 399 aacattggagggatcgcagagaagatggtgttcttgtcgat 439
||||| ||||| | |||||||||||||||||||| |||||
Sbjct: 4799 aacatcggaggaactgcagagaagatggtgttcttatcgat 4839
>ref|XM_469632.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2313
Score = 246 bits (124), Expect = 2e-062
Identities = 239/278 (85%)
Strand = Plus / Minus
Query: 471 gaaatcagtgctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtag 530
||||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||||
Sbjct: 1861 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 1802
Query: 531 ttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccaccattgctccaaca 590
|| || |||||||||||| |||| ||| |||| ||||||||||| |||| |||||||| |
Sbjct: 1801 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 1742
Query: 591 aggatgttagggtttgccttcttcgtgtccctccatttgtaacctcctttgcatccatac 650
||||| ||||| |||| |||||| || ||||||||||| | |||||||||||||||||
Sbjct: 1741 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 1682
Query: 651 ttgacgccgttatgaggtatcgaggcacctctgtggtgagggcgcttcgggtacttgttt 710
||||| || |||||||| || || ||||||||||| |||| |||||| ||||||||||||
Sbjct: 1681 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 1622
Query: 711 ncgaaacccacancgtagctcatcttcaatgggttctt 748
| ||||||||| ||||||||||||||| |||||||||
Sbjct: 1621 ccaaaacccacaacgtagctcatcttcagtgggttctt 1584
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 2127 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 2068
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 2067 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 2029
Score = 58.0 bits (29), Expect = 8e-006
Identities = 83/101 (82%)
Strand = Plus / Minus
Query: 339 atattcagaggtctgtctctctatggtttccatgctgatggcggcggcggcggtgtcgga 398
|||||||| | |||| |||| |||||||||| ||||| || || || || || || |||
Sbjct: 1990 atattcagcgatctgactcttcatggtttccaagctgacggtggaggtgggggagttgga 1931
Query: 399 aacattggagggatcgcagagaagatggtgttcttgtcgat 439
||||| ||||| | |||||||||||||||||||| |||||
Sbjct: 1930 aacatcggaggaactgcagagaagatggtgttcttatcgat 1890
>ref|NT_079916.2| Oryza sativa (japonica cultivar-group)
Length = 3914802
Score = 246 bits (124), Expect = 2e-062
Identities = 239/278 (85%)
Strand = Plus / Plus
Query: 471 gaaatcagtgctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtag 530
||||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||||
Sbjct: 3196332 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 3196391
Query: 531 ttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccaccattgctccaaca 590
|| || |||||||||||| |||| ||| |||| ||||||||||| |||| |||||||| |
Sbjct: 3196392 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 3196451
Query: 591 aggatgttagggtttgccttcttcgtgtccctccatttgtaacctcctttgcatccatac 650
||||| ||||| |||| |||||| || ||||||||||| | |||||||||||||||||
Sbjct: 3196452 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 3196511
Query: 651 ttgacgccgttatgaggtatcgaggcacctctgtggtgagggcgcttcgggtacttgttt 710
||||| || |||||||| || || ||||||||||| |||| |||||| ||||||||||||
Sbjct: 3196512 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 3196571
Query: 711 ncgaaacccacancgtagctcatcttcaatgggttctt 748
| ||||||||| ||||||||||||||| |||||||||
Sbjct: 3196572 ccaaaacccacaacgtagctcatcttcagtgggttctt 3196609
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 3196066 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 3196125
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 3196126 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 3196164
Score = 58.0 bits (29), Expect = 8e-006
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 339 atattcagaggtctgtctctctatggtttccatgctgatggcggcggcggcggtgtcgga 398
|||||||| | |||| |||| |||||||||| ||||| || || || || || || |||
Sbjct: 3196203 atattcagcgatctgactcttcatggtttccaagctgacggtggaggtgggggagttgga 3196262
Query: 399 aacattggagggatcgcagagaagatggtgttcttgtcgat 439
||||| ||||| | |||||||||||||||||||| |||||
Sbjct: 3196263 aacatcggaggaactgcagagaagatggtgttcttatcgat 3196303
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 246 bits (124), Expect = 2e-062
Identities = 239/278 (85%)
Strand = Plus / Plus
Query: 471 gaaatcagtgctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtag 530
||||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||||
Sbjct: 3583833 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 3583892
Query: 531 ttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccaccattgctccaaca 590
|| || |||||||||||| |||| ||| |||| ||||||||||| |||| |||||||| |
Sbjct: 3583893 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 3583952
Query: 591 aggatgttagggtttgccttcttcgtgtccctccatttgtaacctcctttgcatccatac 650
||||| ||||| |||| |||||| || ||||||||||| | |||||||||||||||||
Sbjct: 3583953 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 3584012
Query: 651 ttgacgccgttatgaggtatcgaggcacctctgtggtgagggcgcttcgggtacttgttt 710
||||| || |||||||| || || ||||||||||| |||| |||||| ||||||||||||
Sbjct: 3584013 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 3584072
Query: 711 ncgaaacccacancgtagctcatcttcaatgggttctt 748
| ||||||||| ||||||||||||||| |||||||||
Sbjct: 3584073 ccaaaacccacaacgtagctcatcttcagtgggttctt 3584110
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 3583567 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 3583626
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 3583627 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 3583665
Score = 58.0 bits (29), Expect = 8e-006
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 339 atattcagaggtctgtctctctatggtttccatgctgatggcggcggcggcggtgtcgga 398
|||||||| | |||| |||| |||||||||| ||||| || || || || || || |||
Sbjct: 3583704 atattcagcgatctgactcttcatggtttccaagctgacggtggaggtgggggagttgga 3583763
Query: 399 aacattggagggatcgcagagaagatggtgttcttgtcgat 439
||||| ||||| | |||||||||||||||||||| |||||
Sbjct: 3583764 aacatcggaggaactgcagagaagatggtgttcttatcgat 3583804
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 246 bits (124), Expect = 2e-062
Identities = 239/278 (85%)
Strand = Plus / Plus
Query: 471 gaaatcagtgctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtag 530
||||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||||
Sbjct: 30849996 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 30850055
Query: 531 ttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccaccattgctccaaca 590
|| || |||||||||||| |||| ||| |||| ||||||||||| |||| |||||||| |
Sbjct: 30850056 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 30850115
Query: 591 aggatgttagggtttgccttcttcgtgtccctccatttgtaacctcctttgcatccatac 650
||||| ||||| |||| |||||| || ||||||||||| | |||||||||||||||||
Sbjct: 30850116 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 30850175
Query: 651 ttgacgccgttatgaggtatcgaggcacctctgtggtgagggcgcttcgggtacttgttt 710
||||| || |||||||| || || ||||||||||| |||| |||||| ||||||||||||
Sbjct: 30850176 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 30850235
Query: 711 ncgaaacccacancgtagctcatcttcaatgggttctt 748
| ||||||||| ||||||||||||||| |||||||||
Sbjct: 30850236 ccaaaacccacaacgtagctcatcttcagtgggttctt 30850273
Score = 65.9 bits (33), Expect = 3e-008
Identities = 102/125 (81%)
Strand = Plus / Plus
Query: 519 gtgtagttgtagttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccacc 578
||||||||||| ||| |||| ||||| ||| ||||||| | | ||||||||||| |||
Sbjct: 12365958 gtgtagttgtaattcttgcgaacatccttgaagccgtcgtggcgatcagggccagctacc 12366017
Query: 579 attgctccaacaaggatgttagggtttgccttcttcgtgtccctccatttgtaacctcct 638
|| ||||| || | |||||||||||||| ||||| || || ||||| || ||||||||
Sbjct: 12366018 atcgctccgacgatgatgttagggtttggtttcttggtttctctccacttccaacctcct 12366077
Query: 639 ttgca 643
|||||
Sbjct: 12366078 ttgca 12366082
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 30849730 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 30849789
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 30849790 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 30849828
Score = 58.0 bits (29), Expect = 8e-006
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 339 atattcagaggtctgtctctctatggtttccatgctgatggcggcggcggcggtgtcgga 398
|||||||| | |||| |||| |||||||||| ||||| || || || || || || |||
Sbjct: 30849867 atattcagcgatctgactcttcatggtttccaagctgacggtggaggtgggggagttgga 30849926
Query: 399 aacattggagggatcgcagagaagatggtgttcttgtcgat 439
||||| ||||| | |||||||||||||||||||| |||||
Sbjct: 30849927 aacatcggaggaactgcagagaagatggtgttcttatcgat 30849967
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 246 bits (124), Expect = 2e-062
Identities = 239/278 (85%)
Strand = Plus / Plus
Query: 471 gaaatcagtgctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtag 530
||||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||||
Sbjct: 29981251 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 29981310
Query: 531 ttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccaccattgctccaaca 590
|| || |||||||||||| |||| ||| |||| ||||||||||| |||| |||||||| |
Sbjct: 29981311 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 29981370
Query: 591 aggatgttagggtttgccttcttcgtgtccctccatttgtaacctcctttgcatccatac 650
||||| ||||| |||| |||||| || ||||||||||| | |||||||||||||||||
Sbjct: 29981371 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 29981430
Query: 651 ttgacgccgttatgaggtatcgaggcacctctgtggtgagggcgcttcgggtacttgttt 710
||||| || |||||||| || || ||||||||||| |||| |||||| ||||||||||||
Sbjct: 29981431 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 29981490
Query: 711 ncgaaacccacancgtagctcatcttcaatgggttctt 748
| ||||||||| ||||||||||||||| |||||||||
Sbjct: 29981491 ccaaaacccacaacgtagctcatcttcagtgggttctt 29981528
Score = 65.9 bits (33), Expect = 3e-008
Identities = 102/125 (81%)
Strand = Plus / Plus
Query: 519 gtgtagttgtagttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccacc 578
||||||||||| ||| |||| ||||| ||| ||||||| | | ||||||||||| |||
Sbjct: 12074368 gtgtagttgtaattcttgcgaacatccttgaagccgtcgtggcgatcagggccagctacc 12074427
Query: 579 attgctccaacaaggatgttagggtttgccttcttcgtgtccctccatttgtaacctcct 638
|| ||||| || | |||||||||||||| ||||| || || ||||| || ||||||||
Sbjct: 12074428 atcgctccgacgatgatgttagggtttggtttcttggtttctctccacttccaacctcct 12074487
Query: 639 ttgca 643
|||||
Sbjct: 12074488 ttgca 12074492
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 29980985 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 29981044
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 29981045 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 29981083
Score = 58.0 bits (29), Expect = 8e-006
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 339 atattcagaggtctgtctctctatggtttccatgctgatggcggcggcggcggtgtcgga 398
|||||||| | |||| |||| |||||||||| ||||| || || || || || || |||
Sbjct: 29981122 atattcagcgatctgactcttcatggtttccaagctgacggtggaggtgggggagttgga 29981181
Query: 399 aacattggagggatcgcagagaagatggtgttcttgtcgat 439
||||| ||||| | |||||||||||||||||||| |||||
Sbjct: 29981182 aacatcggaggaactgcagagaagatggtgttcttatcgat 29981222
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 246 bits (124), Expect = 2e-062
Identities = 239/278 (85%)
Strand = Plus / Plus
Query: 471 gaaatcagtgctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtag 530
||||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||||
Sbjct: 29889829 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 29889888
Query: 531 ttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccaccattgctccaaca 590
|| || |||||||||||| |||| ||| |||| ||||||||||| |||| |||||||| |
Sbjct: 29889889 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 29889948
Query: 591 aggatgttagggtttgccttcttcgtgtccctccatttgtaacctcctttgcatccatac 650
||||| ||||| |||| |||||| || ||||||||||| | |||||||||||||||||
Sbjct: 29889949 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 29890008
Query: 651 ttgacgccgttatgaggtatcgaggcacctctgtggtgagggcgcttcgggtacttgttt 710
||||| || |||||||| || || ||||||||||| |||| |||||| ||||||||||||
Sbjct: 29890009 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgttt 29890068
Query: 711 ncgaaacccacancgtagctcatcttcaatgggttctt 748
| ||||||||| ||||||||||||||| |||||||||
Sbjct: 29890069 ccaaaacccacaacgtagctcatcttcagtgggttctt 29890106
Score = 65.9 bits (33), Expect = 3e-008
Identities = 102/125 (81%)
Strand = Plus / Plus
Query: 519 gtgtagttgtagttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccacc 578
||||||||||| ||| |||| ||||| ||| ||||||| | | ||||||||||| |||
Sbjct: 12077605 gtgtagttgtaattcttgcgaacatccttgaagccgtcgtggcgatcagggccagctacc 12077664
Query: 579 attgctccaacaaggatgttagggtttgccttcttcgtgtccctccatttgtaacctcct 638
|| ||||| || | |||||||||||||| ||||| || || ||||| || ||||||||
Sbjct: 12077665 atcgctccgacgatgatgttagggtttggtttcttggtttctctccacttccaacctcct 12077724
Query: 639 ttgca 643
|||||
Sbjct: 12077725 ttgca 12077729
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 29889563 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 29889622
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 29889623 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 29889661
Score = 58.0 bits (29), Expect = 8e-006
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 339 atattcagaggtctgtctctctatggtttccatgctgatggcggcggcggcggtgtcgga 398
|||||||| | |||| |||| |||||||||| ||||| || || || || || || |||
Sbjct: 29889700 atattcagcgatctgactcttcatggtttccaagctgacggtggaggtgggggagttgga 29889759
Query: 399 aacattggagggatcgcagagaagatggtgttcttgtcgat 439
||||| ||||| | |||||||||||||||||||| |||||
Sbjct: 29889760 aacatcggaggaactgcagagaagatggtgttcttatcgat 29889800
>gb|C25232.1|C25232 C25232 Rice shoot Oryza sativa (japonica cultivar-group) cDNA clone
S5659_1A, mRNA sequence
Length = 375
Score = 244 bits (123), Expect = 7e-062
Identities = 232/269 (86%)
Strand = Plus / Minus
Query: 480 gctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtagttcgtgcgg 539
||||| ||||| ||||| ||||| ||||| |||||||| ||||| |||||||| || |||
Sbjct: 320 gctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtagtttgtacgg 261
Query: 540 acatctttgtagccgtcacgcctgtcagggccagccaccattgctccaacaaggatgtta 599
||||||||| |||| ||| |||| ||||||||||| |||| |||||||| |||||| |||
Sbjct: 260 acatctttgaagccatcatgcctatcagggccagcaaccagtgctccaataaggatatta 201
Query: 600 gggtttgccttcttcgtgtccctccatttgtaacctcctttgcatccatacttgacgccg 659
|| |||| |||||| || ||||||||||| | ||||||||||||||||| ||||| ||
Sbjct: 200 ggatttggcttcttagtctccctccatttaaagcctcctttgcatccatatttgacacca 141
Query: 660 ttatgaggtatcgaggcacctctgtggtgagggcgcttcgggtacttgtttncgaaaccc 719
|||||||| || || ||||||||||| |||| |||||| |||||||||||| | ||||||
Sbjct: 140 ttatgagggattgatgcacctctgtgatgagcgcgcttggggtacttgtttccaaaaccc 81
Query: 720 acancgtagctcatcttcaatgggttctt 748
||| ||||||||||||||| |||||||||
Sbjct: 80 acaacgtagctcatcttcagtgggttctt 52
>gb|AU095892.1|AU095892 AU095892 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11425, mRNA sequence
Length = 711
Score = 188 bits (95), Expect = 3e-045
Identities = 217/257 (84%), Gaps = 1/257 (0%)
Strand = Plus / Minus
Query: 471 gaaatcagtgctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtag 530
||||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||||
Sbjct: 257 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 198
Query: 531 ttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccaccattgctccaaca 590
|| || |||||||||||| |||| ||| |||| ||||||||||| |||| |||||||| |
Sbjct: 197 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 138
Query: 591 aggatgttagggtttgccttcttcgtgtccctccatttgtaacctcctttgcatccatac 650
||||| ||||| |||| |||||| || ||||||||||| | |||||||||||||||||
Sbjct: 137 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 78
Query: 651 ttgacgccgttatgaggtatcgaggcacctctgtggtgagggcgc-ttcgggtacttgtt 709
||||| || |||||||| || || ||||||||||| |||| |||| || ||| |||||||
Sbjct: 77 ttgacaccattatgagggattgatgcacctctgtgatgagcgcgctttgggggacttgtt 18
Query: 710 tncgaaacccacancgt 726
| | ||||||||| |||
Sbjct: 17 tccaaaacccacaacgt 1
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 523 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 464
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 463 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 425
Score = 58.0 bits (29), Expect = 8e-006
Identities = 83/101 (82%)
Strand = Plus / Minus
Query: 339 atattcagaggtctgtctctctatggtttccatgctgatggcggcggcggcggtgtcgga 398
|||||||| | |||| |||| |||||||||| ||||| || || || || || || |||
Sbjct: 386 atattcagcgatctgactcttcatggtttccaagctgacggtggaggtgggggagttgga 327
Query: 399 aacattggagggatcgcagagaagatggtgttcttgtcgat 439
||||| ||||| | |||||||||||||||||||| |||||
Sbjct: 326 aacatcggaggaactgcagagaagatggtgttcttatcgat 286
>gb|CA999085.1|CA999085 S234M_H10 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 651
Score = 168 bits (85), Expect = 3e-039
Identities = 181/213 (84%)
Strand = Plus / Minus
Query: 471 gaaatcagtgctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtag 530
||||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||||
Sbjct: 213 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 154
Query: 531 ttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccaccattgctccaaca 590
|| || |||||||||||| |||| ||| |||| ||||||||||| |||| |||||||| |
Sbjct: 153 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 94
Query: 591 aggatgttagggtttgccttcttcgtgtccctccatttgtaacctcctttgcatccatac 650
||||| ||||| |||| |||||| || ||||||||||| | |||||||||||||||||
Sbjct: 93 aggatattaggatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 34
Query: 651 ttgacgccgttatgaggtatcgaggcacctctg 683
||||| || |||||||| || || |||||||||
Sbjct: 33 ttgacaccattatgagggattgatgcacctctg 1
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 479 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 420
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 419 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 381
Score = 58.0 bits (29), Expect = 8e-006
Identities = 83/101 (82%)
Strand = Plus / Minus
Query: 339 atattcagaggtctgtctctctatggtttccatgctgatggcggcggcggcggtgtcgga 398
|||||||| | |||| |||| |||||||||| ||||| || || || || || || |||
Sbjct: 342 atattcagcgatctgactcttcatggtttccaagctgacggtggaggtgggggagttgga 283
Query: 399 aacattggagggatcgcagagaagatggtgttcttgtcgat 439
||||| ||||| | |||||||||||||||||||| |||||
Sbjct: 282 aacatcggaggaactgcagagaagatggtgttcttatcgat 242
>gb|CB644827.1|CB644827 OSJNEb06D08.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb06D08 5', mRNA sequence
Length = 866
Score = 163 bits (82), Expect = 2e-037
Identities = 158/184 (85%)
Strand = Plus / Minus
Query: 565 cagggccagccaccattgctccaacaaggatgttagggtttgccttcttcgtgtccctcc 624
|||||||||| |||| |||||||| |||||| ||||| || | |||||| || |||||||
Sbjct: 866 cagggccagcaaccagtgctccaataaggatattaggattgggcttcttagtctccctcc 807
Query: 625 atttgtaacctcctttgcatccatacttgacgccgttatgaggtatcgaggcacctctgt 684
||| | ||||||||||||||||| ||||| || |||||||| || || ||||||||||
Sbjct: 806 attaaaagcctcctttgcatccatatttgacaccattatgagggattgatgcacctctgt 747
Query: 685 ggtgagggcgcttcgggtacttgtttncgaaacccacancgtagctcatcttcaatgggt 744
| |||| |||||| |||||||||||| | ||||||||| ||||||||||||||| |||||
Sbjct: 746 gatgagcgcgcttggggtacttgtttccaaaacccacaacgtagctcatcttcagtgggt 687
Query: 745 tctt 748
||||
Sbjct: 686 tctt 683
>gb|CB637093.1|CB637093 OSJNEa03E10.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa03E10 3', mRNA sequence
Length = 632
Score = 153 bits (77), Expect = 2e-034
Identities = 167/197 (84%)
Strand = Plus / Plus
Query: 471 gaaatcagtgctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtag 530
||||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||||
Sbjct: 424 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 483
Query: 531 ttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccaccattgctccaaca 590
|| || |||||||||||| |||| ||| |||| ||||||||||| |||| |||||||| |
Sbjct: 484 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaata 543
Query: 591 aggatgttagggtttgccttcttcgtgtccctccatttgtaacctcctttgcatccatac 650
||||| ||| | |||| |||||| || ||||||||||| | |||||||||||||||||
Sbjct: 544 aggatattaagatttggcttcttagtctccctccatttaaagcctcctttgcatccatat 603
Query: 651 ttgacgccgttatgagg 667
||||| || ||||||||
Sbjct: 604 ttgacaccattatgagg 620
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 159 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 218
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 219 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 257
Score = 48.1 bits (24), Expect = 0.008
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 396 ggaaacattggagggatcgcagagaagatggtgttcttgtcgat 439
|||||||| ||||| | |||||||||||||||||||| |||||
Sbjct: 352 ggaaacatcggaggaactgcagagaagatggtgttcttatcgat 395
>gb|CF325734.1|CF325734 JMT1--04-B01.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--04-B01, mRNA sequence
Length = 353
Score = 109 bits (55), Expect = 2e-021
Identities = 109/127 (85%)
Strand = Plus / Minus
Query: 480 gctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtagttcgtgcgg 539
||||| ||||| ||||| ||||| ||||| |||||||| ||||| |||||||| || |||
Sbjct: 137 gctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtagtttgtacgg 78
Query: 540 acatctttgtagccgtcacgcctgtcagggccagccaccattgctccaacaaggatgtta 599
||||||||| |||| ||| |||| ||||||||||| |||| |||||||| |||||| |||
Sbjct: 77 acatctttgaagccatcatgcctatcagggccagcaaccagtgctccaataaggatatta 18
Query: 600 gggtttg 606
|| ||||
Sbjct: 17 ggatttg 11
Score = 48.1 bits (24), Expect = 0.008
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 396 ggaaacattggagggatcgcagagaagatggtgttcttgtcgat 439
|||||||| ||||| | |||||||||||||||||||| |||||
Sbjct: 218 ggaaacatcggaggaactgcagagaagatggtgttcttatcgat 175
>gb|AU093799.1|AU093799 AU093799 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0539, mRNA sequence
Length = 545
Score = 99.6 bits (50), Expect = 2e-018
Identities = 101/118 (85%)
Strand = Plus / Minus
Query: 471 gaaatcagtgctgcaaccagaccagcgtttgccgcaagggtaggctctgtgtagttgtag 530
||||||| ||||| ||||| ||||| ||||| ||||| |||||||| ||||| ||||||
Sbjct: 119 gaaatcaaggctgccaccaggccagcatttgctgcaagagtaggctccgtgtaattgtag 60
Query: 531 ttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccaccattgctccaa 588
|| || |||||||||||| |||| ||| |||| ||||||||||| |||| ||||||||
Sbjct: 59 tttgtacggacatctttgaagccatcatgcctatcagggccagcaaccagtgctccaa 2
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 385 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 326
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 325 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 287
Score = 58.0 bits (29), Expect = 8e-006
Identities = 83/101 (82%)
Strand = Plus / Minus
Query: 339 atattcagaggtctgtctctctatggtttccatgctgatggcggcggcggcggtgtcgga 398
|||||||| | |||| |||| |||||||||| ||||| || || || || || || |||
Sbjct: 248 atattcagcgatctgactcttcatggtttccaagctgacggtggaggtgggggagttgga 189
Query: 399 aacattggagggatcgcagagaagatggtgttcttgtcgat 439
||||| ||||| | |||||||||||||||||||| |||||
Sbjct: 188 aacatcggaggaactgcagagaagatggtgttcttatcgat 148
>gb|CX728909.1|CX728909 OSJNEf15N02.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf15N02 3', mRNA sequence
Length = 363
Score = 71.9 bits (36), Expect = 5e-010
Identities = 86/100 (86%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 198 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 257
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| ||||||||||||||||||
Sbjct: 258 atgttgtctgcttt-ctgtatgtggcctttgctgtaccaa 296
>dbj|AK102748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106K04, full
insert sequence
Length = 2189
Score = 65.9 bits (33), Expect = 3e-008
Identities = 102/125 (81%)
Strand = Plus / Minus
Query: 519 gtgtagttgtagttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccacc 578
||||||||||| ||| |||| ||||| ||| ||||||| | | ||||||||||| |||
Sbjct: 1817 gtgtagttgtaattcttgcgaacatccttgaagccgtcgtggcgatcagggccagctacc 1758
Query: 579 attgctccaacaaggatgttagggtttgccttcttcgtgtccctccatttgtaacctcct 638
|| ||||| || | |||||||||||||| ||||| || || ||||| || ||||||||
Sbjct: 1757 atcgctccgacgatgatgttagggtttggtttcttggtttctctccacttccaacctcct 1698
Query: 639 ttgca 643
|||||
Sbjct: 1697 ttgca 1693
>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
OSJNBa0052J20, complete sequence
Length = 144969
Score = 65.9 bits (33), Expect = 3e-008
Identities = 102/125 (81%)
Strand = Plus / Plus
Query: 519 gtgtagttgtagttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccacc 578
||||||||||| ||| |||| ||||| ||| ||||||| | | ||||||||||| |||
Sbjct: 98185 gtgtagttgtaattcttgcgaacatccttgaagccgtcgtggcgatcagggccagctacc 98244
Query: 579 attgctccaacaaggatgttagggtttgccttcttcgtgtccctccatttgtaacctcct 638
|| ||||| || | |||||||||||||| ||||| || || ||||| || ||||||||
Sbjct: 98245 atcgctccgacgatgatgttagggtttggtttcttggtttctctccacttccaacctcct 98304
Query: 639 ttgca 643
|||||
Sbjct: 98305 ttgca 98309
>gb|AACV01006539.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006539, whole
genome shotgun sequence
Length = 40585
Score = 65.9 bits (33), Expect = 3e-008
Identities = 102/125 (81%)
Strand = Plus / Plus
Query: 519 gtgtagttgtagttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccacc 578
||||||||||| ||| |||| ||||| ||| ||||||| | | ||||||||||| |||
Sbjct: 6387 gtgtagttgtaattcttgcgaacatccttgaagccgtcgtggcgatcagggccagctacc 6446
Query: 579 attgctccaacaaggatgttagggtttgccttcttcgtgtccctccatttgtaacctcct 638
|| ||||| || | |||||||||||||| ||||| || || ||||| || ||||||||
Sbjct: 6447 atcgctccgacgatgatgttagggtttggtttcttggtttctctccacttccaacctcct 6506
Query: 639 ttgca 643
|||||
Sbjct: 6507 ttgca 6511
>ref|NT_107192.1| Oryza sativa (japonica cultivar-group)
Length = 4781381
Score = 65.9 bits (33), Expect = 3e-008
Identities = 102/125 (81%)
Strand = Plus / Plus
Query: 519 gtgtagttgtagttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccacc 578
||||||||||| ||| |||| ||||| ||| ||||||| | | ||||||||||| |||
Sbjct: 3419865 gtgtagttgtaattcttgcgaacatccttgaagccgtcgtggcgatcagggccagctacc 3419924
Query: 579 attgctccaacaaggatgttagggtttgccttcttcgtgtccctccatttgtaacctcct 638
|| ||||| || | |||||||||||||| ||||| || || ||||| || ||||||||
Sbjct: 3419925 atcgctccgacgatgatgttagggtttggtttcttggtttctctccacttccaacctcct 3419984
Query: 639 ttgca 643
|||||
Sbjct: 3419985 ttgca 3419989
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 65.9 bits (33), Expect = 3e-008
Identities = 102/125 (81%)
Strand = Plus / Plus
Query: 519 gtgtagttgtagttcgtgcggacatctttgtagccgtcacgcctgtcagggccagccacc 578
||||||||||| ||| |||| ||||| ||| ||||||| | | ||||||||||| |||
Sbjct: 12173596 gtgtagttgtaattcttgcgaacatccttgaagccgtcgtggcgatcagggccagctacc 12173655
Query: 579 attgctccaacaaggatgttagggtttgccttcttcgtgtccctccatttgtaacctcct 638
|| ||||| || | |||||||||||||| ||||| || || ||||| || ||||||||
Sbjct: 12173656 atcgctccgacgatgatgttagggtttggtttcttggtttctctccacttccaacctcct 12173715
Query: 639 ttgca 643
|||||
Sbjct: 12173716 ttgca 12173720
>gb|CB685436.1|CB685436 OSJNEf15N02.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf15N02 5', mRNA sequence
Length = 343
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 166 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 107
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 106 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 68
>gb|CV721629.1|CV721629 YBH--04-M10.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--04-M10, mRNA sequence
Length = 216
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 65 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 124
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 125 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 163
>gb|CV721775.1|CV721775 YBH--05-E12.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--05-E12, mRNA sequence
Length = 436
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 125 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 66
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 65 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 27
>gb|CV722211.1|CV722211 YBH--06-N14.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--06-N14, mRNA sequence
Length = 355
Score = 63.9 bits (32), Expect = 1e-007
Identities = 85/100 (85%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 153 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 212
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| ||||| |||| || |||||||||||||||
Sbjct: 213 atgttgtctgcttt-ctgtatgtgtcctttgctgtaccaa 251
>gb|AU093744.1|AU093744 AU093744 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E0084, mRNA sequence
Length = 409
Score = 61.9 bits (31), Expect = 5e-007
Identities = 65/75 (86%), Gaps = 1/75 (1%)
Strand = Plus / Minus
Query: 189 gacagaggattttatactgatctgtcataatggtacag-aaatagaagctctataagctt 247
|||||| || ||||||| ||||||||||| || ||||| ||||||| ||||| |||||||
Sbjct: 231 gacagatgaatttataccgatctgtcatactgatacagaaaatagaggctctgtaagctt 172
Query: 248 atgctgtccgctttc 262
||| |||| ||||||
Sbjct: 171 atgttgtctgctttc 157
>gb|AU075536.1|AU075536 AU075536 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S0028_2Z, mRNA sequence
Length = 418
Score = 60.0 bits (30), Expect = 2e-006
Identities = 85/102 (83%), Gaps = 1/102 (0%)
Strand = Plus / Minus
Query: 339 atattcagaggtctgtctctctatggtttccatgctgatggcggcggcggcggtgtcgga 398
|||||||| | |||| |||| |||||||||| ||||| || || || || || || |||
Sbjct: 115 atattcagcgatctgactcttcatggtttccaagctgacggtggaggtgggggagttgga 56
Query: 399 aacattggagggatc-gcagagaagatggtgttcttgtcgat 439
||||| ||||||| | |||||||||||||||||||| |||||
Sbjct: 55 aacatcggagggaactgcagagaagatggtgttcttatcgat 14
Score = 58.0 bits (29), Expect = 8e-006
Identities = 84/100 (84%), Gaps = 2/100 (2%)
Strand = Plus / Minus
Query: 189 gacagaggattttatactgatctgtcataatggtacagaaa-tagaagctctataagctt 247
|||||| || ||||||| | ||||||||| || |||||||| |||| ||||| |||||||
Sbjct: 252 gacagatgaatttataccgntctgtcatactgatacagaaaatagaggctctgtaagctt 193
Query: 248 atgctgtccgctttcctgttcctggcctttgctgtaccaa 287
||| |||| |||||| ||| || |||||||||||||||
Sbjct: 192 atgttgtctgctttc-tgtatgtgtcctttgctgtaccaa 154
>gb|AU183969.1|AU183969 AU183969 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0245, mRNA sequence
Length = 416
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 372 gctgatggcggcggcggcggtg 393
||||||||||||||||||||||
Sbjct: 280 gctgatggcggcggcggcggtg 301
>dbj|AK120093.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021H10, full
insert sequence
Length = 2056
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 375 gatggcggcggcggcggtgtcg 396
||||||||||||||||||||||
Sbjct: 300 gatggcggcggcggcggtgtcg 321
>ref|NT_107227.1| Oryza sativa (japonica cultivar-group)
Length = 601692
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 372 gctgatggcggcggcggcggtg 393
||||||||||||||||||||||
Sbjct: 399025 gctgatggcggcggcggcggtg 399004
>gb|AC132489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0537C11,
complete sequence
Length = 146677
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 372 gctgatggcggcggcggcggtg 393
||||||||||||||||||||||
Sbjct: 60600 gctgatggcggcggcggcggtg 60579
>gb|AACV01002848.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002848, whole
genome shotgun sequence
Length = 21463
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 375 gatggcggcggcggcggtgtcg 396
||||||||||||||||||||||
Sbjct: 1759 gatggcggcggcggcggtgtcg 1780
>gb|AACV01009588.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009588, whole
genome shotgun sequence
Length = 20047
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 372 gctgatggcggcggcggcggtg 393
||||||||||||||||||||||
Sbjct: 7288 gctgatggcggcggcggcggtg 7309
>gb|AACV01011424.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg011424, whole
genome shotgun sequence
Length = 55509
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 372 gctgatggcggcggcggcggtg 393
||||||||||||||||||||||
Sbjct: 12721 gctgatggcggcggcggcggtg 12742
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 375 gatggcggcggcggcggtgtcg 396
||||||||||||||||||||||
Sbjct: 39159443 gatggcggcggcggcggtgtcg 39159464
Score = 42.1 bits (21), Expect = 0.48
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 378 ggcggcggcggcggtgtcgga 398
|||||||||||||||||||||
Sbjct: 31465902 ggcggcggcggcggtgtcgga 31465922
>ref|NM_190291.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1389
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 375 gatggcggcggcggcggtgtcg 396
||||||||||||||||||||||
Sbjct: 51 gatggcggcggcggcggtgtcg 72
>ref|XM_472267.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1188
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 372 gctgatggcggcggcggcggtg 393
||||||||||||||||||||||
Sbjct: 450 gctgatggcggcggcggcggtg 471
>ref|NT_079858.2| Oryza sativa (japonica cultivar-group)
Length = 2468003
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 372 gctgatggcggcggcggcggtg 393
||||||||||||||||||||||
Sbjct: 2166916 gctgatggcggcggcggcggtg 2166895
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 375 gatggcggcggcggcggtgtcg 396
||||||||||||||||||||||
Sbjct: 13606826 gatggcggcggcggcggtgtcg 13606847
Score = 42.1 bits (21), Expect = 0.48
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 378 ggcggcggcggcggtgtcgga 398
|||||||||||||||||||||
Sbjct: 5913285 ggcggcggcggcggtgtcgga 5913305
>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0506A10
Length = 145265
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 375 gatggcggcggcggcggtgtcg 396
||||||||||||||||||||||
Sbjct: 96753 gatggcggcggcggcggtgtcg 96774
>gb|CH401195.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000032 genomic
scaffold, whole genome shotgun sequence
Length = 1766531
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 372 gctgatggcggcggcggcggtg 393
||||||||||||||||||||||
Sbjct: 1517355 gctgatggcggcggcggcggtg 1517334
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,065,427
Number of Sequences: 438736
Number of extensions: 2065427
Number of successful extensions: 49499
Number of sequences better than 0.5: 71
Number of HSP's better than 0.5 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46761
Number of HSP's gapped (non-prelim): 2663
length of query: 845
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 824
effective length of database: 2,791,206,460
effective search space: 2299954123040
effective search space used: 2299954123040
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)