BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805363.2.1
(2856 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK098978.1| Oryza sativa (japonica cultivar-group) cDNA... 2010 0.0
dbj|AK067967.1| Oryza sativa (japonica cultivar-group) cDNA... 2002 0.0
dbj|AK099228.1| Oryza sativa (japonica cultivar-group) cDNA... 2002 0.0
dbj|AK099281.1| Oryza sativa (japonica cultivar-group) cDNA... 2002 0.0
dbj|AK102140.1| Oryza sativa (japonica cultivar-group) cDNA... 2002 0.0
dbj|AK100188.1| Oryza sativa (japonica cultivar-group) cDNA... 1994 0.0
gb|AF030052.1|AF030052 Oryza sativa subsp. japonica RSW1-li... 940 0.0
dbj|AK060838.1| Oryza sativa (japonica cultivar-group) cDNA... 692 0.0
gb|D41986.1|D41986 RICS5041A Rice shoot Oryza sativa (japon... 486 e-134
gb|CF323300.1|CF323300 HDN--03-H17.g1 OsHDAC1-overexpressin... 418 e-114
dbj|AK060079.1| Oryza sativa (japonica cultivar-group) cDNA... 418 e-114
dbj|AK067850.1| Oryza sativa (japonica cultivar-group) cDNA... 414 e-112
gb|AC132494.1| Oryza sativa (japonica cultivar-group) chrom... 363 4e-097
gb|AC144738.2| Oryza sativa (japonica cultivar-group) chrom... 363 4e-097
gb|AC135426.2| Oryza sativa (japonica cultivar-group) chrom... 363 4e-097
gb|AACV01011005.1| Oryza sativa (japonica cultivar-group) c... 363 4e-097
ref|NT_107223.1| Oryza sativa (japonica cultivar-group) 363 4e-097
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 363 4e-097
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 363 4e-097
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 363 4e-097
gb|AU032126.1|AU032126 AU032126 Rice root Oryza sativa (jap... 307 2e-080
gb|D40691.1|D40691 RICS2805A Rice shoot Oryza sativa (japon... 299 4e-078
gb|D24862.1|D24862 RICR2668A Rice root Oryza sativa (japoni... 297 2e-077
gb|D47821.1|D47821 RICS13532A Rice green shoot Oryza sativa... 264 2e-067
gb|D24860.1|D24860 RICR2666A Rice root Oryza sativa (japoni... 262 1e-066
gb|D24381.1|D24381 RICR1814A Rice root Oryza sativa (japoni... 194 2e-046
gb|CB641167.1|CB641167 OSJNEa18C01.f OSJNEa Oryza sativa (j... 165 2e-037
gb|CB641197.1|CB641197 OSJNEa18D17.f OSJNEa Oryza sativa (j... 165 2e-037
dbj|AK072356.1| Oryza sativa (japonica cultivar-group) cDNA... 165 2e-037
ref|XM_477093.1| Oryza sativa (japonica cultivar-group), mRNA 165 2e-037
gb|D47732.1|D47732 RICS13393A Rice green shoot Oryza sativa... 161 3e-036
gb|CB636280.1|CB636280 OSJNEa01J02.r OSJNEa Oryza sativa (j... 141 2e-030
dbj|AK061688.1| Oryza sativa (japonica cultivar-group) cDNA... 141 2e-030
dbj|AK069196.1| Oryza sativa (japonica cultivar-group) cDNA... 141 2e-030
gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 ... 141 2e-030
gb|AC145384.2| Oryza sativa chromosome 3 BAC OSJNBa0060M17 ... 141 2e-030
gb|AACV01008134.1| Oryza sativa (japonica cultivar-group) c... 141 2e-030
ref|XM_470040.1| Oryza sativa (japonica cultivar-group), mRNA 141 2e-030
ref|NT_107188.1| Oryza sativa (japonica cultivar-group) 141 2e-030
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 141 2e-030
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 141 2e-030
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 141 2e-030
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 141 2e-030
dbj|AK058615.1| Oryza sativa (japonica cultivar-group) cDNA... 137 4e-029
gb|AU096339.1|AU096339 AU096339 Rice green shoot Oryza sati... 125 1e-025
gb|CA999072.1|CA999072 S234M_G06 Rice cold stress germinati... 117 3e-023
dbj|AK062007.1| Oryza sativa (japonica cultivar-group) cDNA... 117 3e-023
dbj|AP003837.2| Oryza sativa (japonica cultivar-group) geno... 117 3e-023
dbj|AP003748.4| Oryza sativa (japonica cultivar-group) geno... 117 3e-023
gb|AACV01015403.1| Oryza sativa (japonica cultivar-group) c... 117 3e-023
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 117 3e-023
gb|CH401220.1| Oryza sativa (japonica cultivar-group) chrom... 117 3e-023
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 117 3e-023
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 117 3e-023
gb|CB640128.1|CB640128 OSJNEa13G02.f OSJNEa Oryza sativa (j... 109 8e-021
gb|CF277609.1|CF277609 14ETL--03-D13.b1 Rice etiolated leaf... 109 8e-021
dbj|AK060814.1| Oryza sativa (japonica cultivar-group) cDNA... 109 8e-021
dbj|AK100877.1| Oryza sativa (japonica cultivar-group) cDNA... 109 8e-021
dbj|AK101178.1| Oryza sativa (japonica cultivar-group) cDNA... 109 8e-021
gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 ... 109 8e-021
gb|AACV01008229.1| Oryza sativa (japonica cultivar-group) c... 109 8e-021
ref|XM_470347.1| Oryza sativa (japonica cultivar-group), mRNA 109 8e-021
ref|NT_079914.2| Oryza sativa (japonica cultivar-group) 109 8e-021
gb|AU082170.1|AU082170 AU082170 Rice green shoot Oryza sati... 103 5e-019
gb|CB675258.1|CB675258 OSJNEe10O07.r OSJNEe Oryza sativa (j... 98 3e-017
gb|C72423.1|C72423 C72423 Rice panicle at flowering stage O... 94 5e-016
gb|CB671503.1|CB671503 OSJNEe05B24.f OSJNEe Oryza sativa (j... 94 5e-016
dbj|AK062154.1| Oryza sativa (japonica cultivar-group) cDNA... 94 5e-016
dbj|AK067386.1| Oryza sativa (japonica cultivar-group) cDNA... 94 5e-016
dbj|AK071976.1| Oryza sativa (japonica cultivar-group) cDNA... 94 5e-016
dbj|AK073561.1| Oryza sativa (japonica cultivar-group) cDNA... 94 5e-016
dbj|AK121193.1| Oryza sativa (japonica cultivar-group) cDNA... 94 5e-016
dbj|AP004298.4| Oryza sativa (japonica cultivar-group) geno... 94 5e-016
dbj|AP005248.4| Oryza sativa (japonica cultivar-group) geno... 94 5e-016
gb|AACV01015914.1| Oryza sativa (japonica cultivar-group) c... 94 5e-016
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 94 5e-016
gb|CH401223.1| Oryza sativa (japonica cultivar-group) chrom... 94 5e-016
gb|AU184340.1|AU184340 AU184340 Rice root Oryza sativa (jap... 90 8e-015
gb|CV728643.1|CV728643 FLO--01-B11.g1 Rice flower lambda ph... 90 8e-015
dbj|AK072259.1| Oryza sativa (japonica cultivar-group) cDNA... 90 8e-015
dbj|AK120265.1| Oryza sativa (japonica cultivar-group) cDNA... 90 8e-015
gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06... 90 8e-015
gb|AACV01021752.1| Oryza sativa (japonica cultivar-group) c... 90 8e-015
ref|NM_196933.1| Oryza sativa (japonica cultivar-group) put... 90 8e-015
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 90 8e-015
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 90 8e-015
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 90 8e-015
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 90 8e-015
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 90 8e-015
dbj|AG214135.1| Oryza sativa (japonica cultivar-group) DNA,... 88 3e-014
gb|CB648832.1|CB648832 OSJNEb12G21.f OSJNEb Oryza sativa (j... 88 3e-014
gb|AACV01002349.1| Oryza sativa (japonica cultivar-group) c... 88 3e-014
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 88 3e-014
ref|NM_191233.1| Oryza sativa (japonica cultivar-group), p... 88 3e-014
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 88 3e-014
dbj|AP003237.2| Oryza sativa (japonica cultivar-group) geno... 88 3e-014
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 88 3e-014
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 88 3e-014
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 88 3e-014
dbj|AK100914.1| Oryza sativa (japonica cultivar-group) cDNA... 86 1e-013
ref|XM_477282.1| Oryza sativa (japonica cultivar-group), mRNA 86 1e-013
gb|D40673.1|D40673 RICS2778A Rice shoot Oryza sativa (japon... 80 8e-012
gb|AU032362.1|AU032362 AU032362 Rice root Oryza sativa (jap... 80 8e-012
gb|AU082309.1|AU082309 AU082309 Rice panicle at flowering s... 80 8e-012
gb|CB636279.1|CB636279 OSJNEa01J02.f OSJNEa Oryza sativa (j... 80 8e-012
gb|CB643325.1|CB643325 OSJNEb03P11.r OSJNEb Oryza sativa (j... 80 8e-012
gb|CB661448.1|CB661448 OSJNEd04F08.r OSJNEd Oryza sativa (j... 80 8e-012
dbj|AK100475.1| Oryza sativa (japonica cultivar-group) cDNA... 80 8e-012
dbj|AK121170.1| Oryza sativa (japonica cultivar-group) cDNA... 80 8e-012
dbj|AP005420.3| Oryza sativa (japonica cultivar-group) geno... 80 8e-012
dbj|AP005579.3| Oryza sativa (japonica cultivar-group) geno... 80 8e-012
gb|AACV01020011.1| Oryza sativa (japonica cultivar-group) c... 80 8e-012
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 80 8e-012
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 80 8e-012
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 80 8e-012
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 80 8e-012
gb|AU065353.1|AU065353 AU065353 Rice root Oryza sativa (jap... 76 1e-010
gb|CB000645.1|CB000645 S345Q_E04 Rice cold stress germinati... 76 1e-010
gb|CF309533.1|CF309533 ABF--03-M03.g1 ABF3-overexpressing t... 76 1e-010
gb|D24964.1|D24964 RICR2854A Rice root Oryza sativa (japoni... 76 1e-010
dbj|AP003945.1| Oryza sativa (japonica cultivar-group) chro... 76 1e-010
dbj|AK059649.1| Oryza sativa (japonica cultivar-group) cDNA... 76 1e-010
dbj|AP005824.4| Oryza sativa (japonica cultivar-group) geno... 76 1e-010
gb|AACV01015596.1| Oryza sativa (japonica cultivar-group) c... 76 1e-010
gb|CH401221.1| Oryza sativa (japonica cultivar-group) chrom... 76 1e-010
gb|D46824.1|D46824 RICS11739A Rice green shoot Oryza sativa... 74 5e-010
gb|D23732.1|D23732 RICR0021A Rice root Oryza sativa (japoni... 74 5e-010
gb|D23761.1|D23761 RICR0084A Rice root Oryza sativa (japoni... 74 5e-010
gb|AQ913892.1|AQ913892 nbeb0045L07r CUGI Rice BAC Library (... 72 2e-009
gb|AU222725.1|AU222725 AU222725 Rice shoot Oryza sativa (ja... 72 2e-009
gb|CB640476.1|CB640476 OSJNEa15A06.f OSJNEa Oryza sativa (j... 72 2e-009
gb|CB645001.1|CB645001 OSJNEb06H07.f OSJNEb Oryza sativa (j... 72 2e-009
dbj|AK120236.1| Oryza sativa (japonica cultivar-group) cDNA... 72 2e-009
gb|AU068488.1|AU068488 AU068488 Rice callus Oryza sativa (j... 70 7e-009
gb|CF323718.1|CF323718 HDN--04-J12.g1 OsHDAC1-overexpressin... 70 7e-009
gb|CV721269.1|CV721269 YBH--03-H23.b1 Rice before heading y... 68 3e-008
gb|AQ856523.1|AQ856523 nbeb0003G20f CUGI Rice BAC Library (... 66 1e-007
gb|CB647914.1|CB647914 OSJNEb11A21.r OSJNEb Oryza sativa (j... 66 1e-007
gb|CB650381.1|CB650381 OSJNEb14M17.r OSJNEb Oryza sativa (j... 66 1e-007
gb|CF277079.1|CF277079 14ETL--02-H16.g1 Rice etiolated leaf... 66 1e-007
dbj|AK100374.1| Oryza sativa (japonica cultivar-group) cDNA... 66 1e-007
dbj|AK105078.1| Oryza sativa (japonica cultivar-group) cDNA... 66 1e-007
gb|D41261.1|D41261 RICS3630A Rice shoot Oryza sativa (japon... 62 2e-006
gb|D48053.1|D48053 RICS13983A Rice green shoot Oryza sativa... 60 7e-006
gb|CB639145.1|CB639145 OSJNEa08I15.r OSJNEa Oryza sativa (j... 60 7e-006
gb|CF311260.1|CF311260 ABF--06-G16.b1 ABF3-overexpressing t... 60 7e-006
gb|D48612.2|D48612 RICS14935A Rice green shoot Oryza sativa... 60 7e-006
gb|CB648833.1|CB648833 OSJNEb12G21.r OSJNEb Oryza sativa (j... 58 3e-005
gb|C26272.1|C26272 C26272 Rice callus cDNA Oryza sativa (ja... 56 1e-004
gb|AQ049866.1|AQ049866 nbxb0002cG08f CUGI Rice BAC Library ... 54 4e-004
gb|AQ916163.1|AQ916163 nbeb0061B14r CUGI Rice BAC Library (... 54 4e-004
gb|D24375.1|D24375 RICR1807A Rice root Oryza sativa (japoni... 54 4e-004
gb|AU065472.1|AU065472 AU065472 Rice root Oryza sativa (jap... 54 4e-004
gb|CA998979.1|CA998979 S345S_F09 Rice cold stress germinati... 54 4e-004
gb|CB637086.1|CB637086 OSJNEa03E07.f OSJNEa Oryza sativa (j... 54 4e-004
gb|CB639904.1|CB639904 OSJNEa12H04.f OSJNEa Oryza sativa (j... 54 4e-004
gb|CB640058.1|CB640058 OSJNEa13B21.f OSJNEa Oryza sativa (j... 54 4e-004
gb|CB640086.1|CB640086 OSJNEa13D08.f OSJNEa Oryza sativa (j... 54 4e-004
gb|CB676377.1|CB676377 OSJNEe12J14.f OSJNEe Oryza sativa (j... 54 4e-004
gb|CB677472.1|CB677472 OSJNEe14G24.f OSJNEe Oryza sativa (j... 54 4e-004
gb|CF307212.1|CF307212 HDA1--06-B04.g1 OsHDAC1-overexpressi... 54 4e-004
gb|CB641023.1|CB641023 OSJNEa17H21.f OSJNEa Oryza sativa (j... 50 0.007
gb|CF326709.1|CF326709 JMT1--06-N01.g1 AtJMT-overexpressing... 50 0.007
gb|D47622.1|D47622 RICS13225A Rice green shoot Oryza sativa... 48 0.027
gb|CB671068.1|CB671068 OSJNEe04H10.f OSJNEe Oryza sativa (j... 48 0.027
gb|CF277610.1|CF277610 14ETL--03-D13.g1 Rice etiolated leaf... 48 0.027
gb|CF311164.1|CF311164 ABF--06-E14.b1 ABF3-overexpressing t... 48 0.027
gb|AQ579494.1|AQ579494 nbxb0084D07f CUGI Rice BAC Library O... 46 0.11
gb|AQ573837.1|AQ573837 nbxb0084P08r CUGI Rice BAC Library O... 46 0.11
gb|AQ577763.1|AQ577763 nbxb0091J21f CUGI Rice BAC Library O... 46 0.11
gb|AQ992398.1|AQ992398 nbeb0091C07f CUGI Rice BAC Library (... 46 0.11
gb|C26670.1|C26670 C26670 Rice callus cDNA Oryza sativa (ja... 46 0.11
gb|D24655.1|D24655 RICR2325A Rice root Oryza sativa (japoni... 46 0.11
gb|CB672249.1|CB672249 OSJNEe06D04.f OSJNEe Oryza sativa (j... 46 0.11
emb|AL607097.1|OSJN01006 Oryza sativa (japonica cultivar-gr... 46 0.11
dbj|AP005621.2| Oryza sativa (japonica cultivar-group) geno... 46 0.11
gb|AACV01012856.1| Oryza sativa (japonica cultivar-group) c... 46 0.11
dbj|AP002842.3| Oryza sativa (japonica cultivar-group) geno... 46 0.11
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 46 0.11
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.11
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.11
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 46 0.11
gb|CB681901.1|CB681901 OSJNEf08K11.f OSJNEf Oryza sativa (j... 44 0.42
gb|CV152460.1|CV152460 LS328-S.SEQ Cold stressed rice cDNA ... 44 0.42
gb|CF277078.1|CF277078 14ETL--02-H16.b1 Rice etiolated leaf... 42 1.7
dbj|AK102134.1| Oryza sativa (japonica cultivar-group) cDNA... 42 1.7
dbj|AK102695.1| Oryza sativa (japonica cultivar-group) cDNA... 42 1.7
dbj|AK105393.1| Oryza sativa (japonica cultivar-group) cDNA... 42 1.7
tpg|BK000090.1| TPA: Oryza sativa (japonica cultivar-group)... 42 1.7
gb|AACV01012879.1| Oryza sativa (japonica cultivar-group) c... 42 1.7
dbj|AP001552.1| Oryza sativa (japonica cultivar-group) gene... 42 1.7
ref|NM_185396.2| Oryza sativa (japonica cultivar-group), mRNA 42 1.7
gb|C72208.1|C72208 C72208 Rice panicle at flowering stage O... 40 6.5
>dbj|AK098978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B06, full
insert sequence
Length = 3764
Score = 2010 bits (1014), Expect = 0.0
Identities = 2087/2443 (85%), Gaps = 15/2443 (0%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| ||||| || ||||| || |||||||| |||||||| || ||||| || || ||
Sbjct: 3380 ttctgagtaggcgaaatgaaaggatcgatcttgacccacagaagggagaagatcgacgcg 3321
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| ||||| || |||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 3320 aggaggatcgaccagacgatgacgatggtcggagtgcggttctgcctgcccatgagaccc 3261
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|| ||||| |||||||| ||||||||||||||||| | ||||| ||||| || || ||
Sbjct: 3260 ttgaggaaggggtagagatggaggatcacccagatggagaagaagagctttccaaagaga 3201
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
||||||||||||||||| || ||||| || ||||| || | || ||||| || || |||
Sbjct: 3200 ggaccccatgattggtaaccgctgttaatggcatatgatatacccgccaccatgcccacc 3141
Query: 655 aggttaatcacaagcacagtggtnnnnnnnatcagaagagttgtccacttgaacacatac 714
||||| || |||||||| ||||| || || ||| | |||||||||||||| ||
Sbjct: 3140 aggttgatgacaagcacggtggtcgggggaatgaggagactggtccacttgaacacgtat 3081
Query: 715 agctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcg 774
||||||||||| |||||||| ||||||| |||||||| || || |||||||| || ||
Sbjct: 3080 agctcagcaaagtcaccatcctcatcggacgcctttgaggtaacagtgaagttggtatca 3021
Query: 775 atccctgctagcacttttaagagaccttggaacacagcaaagagatgtgcagaggtgcca 834
|| ||||||| |||||| | ||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 3020 attcctgctaacactttcagaagaccctggaacacagcgaagagatgggcagatgtgcca 2961
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcga 894
||||||||||| ||||| |||||||||||||| ||||| || |||||||||||||||||
Sbjct: 2960 ccaatgacccagaactgttcatttctccaccagtcctcgataccaacaccactccatcgg 2901
Query: 895 agctccaaaataccagtggcgaagatagaagcaaaaagcaggatgaagaacgccccagca 954
||||||| ||||||||| ||||| || || || |||||||| || |||||| |||||||
Sbjct: 2900 agctccagaataccagttgcgaaaatggaggcgaaaagcagaataaagaacatcccagca 2841
Query: 955 taattgctaatcgcaggaataataaatttgttggtgagtaaacagatagcaggaaggacg 1014
|||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||| ||
Sbjct: 2840 taattgctaatctcaggaatgataaatttgttggtgaggagacagatagcaggaagcaca 2781
Query: 1015 cagtatgctactagtgggatagatgtaattggataaacaatggtgttgatgtatgccagt 1074
|| || || | ||||| || |||||||||||||||||||||||||| ||||| |||||
Sbjct: 2780 caataggcgataagtggaatggatgtaattggataaacaatggtgttaatgtaagccagc 2721
Query: 1075 ctctccagaagctttagccttccattgtaaccataccagataggacagtgtctgctaagt 1134
||||||||||| || | | |||||||||||||||||||||||||| |||||||||||
Sbjct: 2720 ctctccagaagtttcaaacgcccattgtaaccataccagataggacaatgtctgctaagc 2661
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||| ||||| || ||||||||||| |||| ||||||||| ||||||||||| |||||
Sbjct: 2660 agaatctcaacagacccaagagcccaacgtagcacttggttaagacgatcagacagattg 2601
Query: 1195 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaacct 1254
||||| ||||||||||||||||| ||||| |||||||||| ||||| ||||||||||||
Sbjct: 2600 attggcgcagaacccttgaagcatggccgtggtggcatgcaatagattgatatccaacct 2541
Query: 1255 cttgcatgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccg 1314
||||| ||||| || || ||||| | |||||| |||||||| || ||||| ||||| ||
Sbjct: 2540 cttgcgtgcattttaaatccagtcagaatatcctcagtaactgaaccatagatccagcca 2481
Query: 1315 atctctttcccccattctgttttatcctcatatnnccacnaaactaatgnacatgtatag 1374
|||||||| |||||||| ||||| ||||||||| |||| |||| || ||||| || |
Sbjct: 2480 atctcttttccccattcagttttgtcctcatat--ccac--aactgat-aacatggatgg 2426
Query: 1375 cttcctttagcagggaacctgggtttgttgaagggggtatgccaccttgagtcataaaan 1434
||||||| || || || ||||||| ||||| || |||||||| ||||||||||| ||
Sbjct: 2425 cttccttcagtagagatgctgggttcgttgagggtggtatgcctccttgagtcatgaa-- 2368
Query: 1435 naanggggtggatgcaataaaaattggagactggccaaagcgtttctccaagctcttctg 1494
|||||| |||||||||||||| || || ||||| |||||||| || ||||||||
Sbjct: 2367 ------ggtggacgcaataaaaattggcgattgaccaaaacgtttctctaatctcttctg 2314
Query: 1495 agacataagcagtgacctttcatcctcgtaaccttcaaatccctcttctatatcttccat 1554
||||| |||| |||||||||||| || |||||||||| ||||||||||||||||||||
Sbjct: 2313 ggacatcagcactgacctttcatcttcataaccttcaatgccctcttctatatcttccat 2254
Query: 1555 gttgaagatgggagccgaagattctgttctcttcatatcacggtttttggaatcaatata 1614
||| ||||| ||||| ||||| |||||||||||||| |||||||||| ||| || ||
Sbjct: 2253 gttaaagataggagctgaagactctgttctcttcatcatacggtttttgctatccatgta 2194
Query: 1615 gctcttgtccttcttttttcttccgccacagcaacttttaatgataatgttaggctccaa 1674
||||||| ||| || ||||| || |||||||| || |||| | ||||||||| |||||
Sbjct: 2193 gctcttgctctttttctttctgccaccacagcagctcttaacaacaatgttaggttccaa 2134
Query: 1675 atcagcttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcc 1734
|||||| || || | |||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 2133 atcagcctcagttagtacaggatcatagccatacaaggcctgcctattgaagcagcaacc 2074
Query: 1735 tgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaa 1794
||||||||||||||| || || ||||||||||||| ||| ||||| ||||||||||||||
Sbjct: 2073 tgttcccacataaactggaccctgaatgccatctaaacctttcatgttaatatcaaagaa 2014
Query: 1795 gacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaa 1854
||| ||||| || || || |||||||| |||||||| || ||||||||||||||||| ||
Sbjct: 2013 gactatgttgcgattagcgtatcgatcgtgcaagtcaatgccatcaaatctttgtgggaa 1954
Query: 1855 ctgaacatagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctct 1914
||||||||| |||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 1953 ctgaacataacaagttttccttcctagtgcgggatccatcatgaaacacattgcttctct 1894
Query: 1915 aagagctttgctgctattgaagtagtgatcacaatccacattaagaagataagcaccatt 1974
|||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 1893 aagagctttgctactgttgaagtagtgatcacaatccacattgagaagataggcaccatt 1834
Query: 1975 cgtcaggacagctgatacgcgaatcaaagcattcatggcaccagccttcttgtggtgctg 2034
||||| ||||| ||||| |||||||| |||||||| ||||||||||||||||| |||||
Sbjct: 1833 tgtcagcacagcagatacacgaatcaatgcattcattgcaccagccttcttgtgatgctg 1774
Query: 2035 gaagcctggcctcttttcacgagaaacataaacaagccgtggcaactcattcccatccgt 2094
||| |||||||||||||||||||| || || ||||||||||||||||| || ||||| ||
Sbjct: 1773 gaatcctggcctcttttcacgagagacgtagacaagccgtggcaactcgttaccatcagt 1714
Query: 2095 gtcaagcccaccactgtggcccaagaatacttggatcattccnggatgatctctagggtt 2154
|||||||||||||||||| |||||||| || || ||||| || || ||||| || |||||
Sbjct: 1713 gtcaagcccaccactgtgccccaagaacacctgaatcatgccagggtgatcccttgggtt 1654
Query: 2155 attcccaggccanggagtgccatcagccatggtccagccctcctcaggtattttttgcgc 2214
|||||||||||| | ||||||||||||||||||||| ||||| ||||||| |||||| ||
Sbjct: 1653 attcccaggccaagcagtgccatcagccatggtccacccctcttcaggtactttttgtgc 1594
Query: 2215 ttttgcaacaagggcatcgatccgtactttgaactcttcatactccctcttcatagcccg 2274
|| |||||||| |||| ||||||||| ||||| ||||||||||| |||||||| |||||
Sbjct: 1593 cttcgcaacaagagcattgatccgtaccttgaattcttcatactctctcttcattgcccg 1534
Query: 2275 cctttctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaaa 2334
||||||||| ||||| |||||||| ||||||||||| ||||||||||| ||| |||||||
Sbjct: 1533 cctttctttaacaaaggaaggttggattttgtccttcaggtaatctattttttgagcaaa 1474
Query: 2335 gtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttcct 2394
||||||||||||||| | |||||||| ||||| ||||||||||| |||||||| |||||
Sbjct: 1473 gtaaaactctggagctcgtggttcaatattgtgcttcttgcaaaacggaacccacttcct 1414
Query: 2395 tgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcaga 2454
||||| ||||| ||||| || ||||| |||||||| |||||||||||||| || |||||
Sbjct: 1413 agcaaattctgcagtttctgacagagcctcaaaagttaacatagctgaaccatcgtcaga 1354
Query: 2455 aacataacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgtt 2514
|||||| ||||| |||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 1353 aacatagcatgacactttgtcaacagggtaatccacagccagaatggacaaaacagtgtt 1294
Query: 2515 gccagtaattagaggaggttccttaagtggatccactgtactaacaaagacatcgattgg 2574
| || || |||||||||||||| ||||||||||| ||||| ||||||||||| || ||
Sbjct: 1293 tgctgtgatcagaggaggttcctttagtggatccaccgtactgacaaagacatcaatggg 1234
Query: 2575 agccaactgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagt 2634
||| | ||| |||||||| |||||||||||||||||||||||||| || || ||||| ||
Sbjct: 1233 agcaagctgtgatggctctccctccctatcatatctcaatgcaagcctgtcaaggtatgt 1174
Query: 2635 ttcacggttgataggataccactttgggaactgatctagaagccaagacaaagcaaacca 2694
||||||||| || || |||||||||||||| |||||||| ||||| || || ||||||||
Sbjct: 1173 ttcacggtttatcgggtaccactttgggaattgatctaggagccaggataaggcaaacca 1114
Query: 2695 aacttcacaaataacagatacaagccacaacccataagcatcttccactggatgagttat 2754
|| |||||| ||||||||||| |||||||| ||||||||||| |||||||||||| |
Sbjct: 1113 aatttcacagataacagatactagccacaatccataagcatcccgcactggatgagtgac 1054
Query: 2755 acgatattgaaagaagaaacat-aggatgataagccggagaacaatcacgatccgataaa 2813
||||||||| |||||| ||||| ||||||||||| ||||||| || || ||||| ||||
Sbjct: 1053 acgatattggaagaag-aacatcaggatgataagacggagaatgataacaatccggtaaa 995
Query: 2814 ggttaagctcgtttggagatatcggcactatgcgacttagagg 2856
|||| |||| ||||| || || ||||||||||| || |||||
Sbjct: 994 ggttgagctggtttgaagggataggcactatgcggctcagagg 952
>dbj|AK067967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013125H24, full
insert sequence
Length = 3802
Score = 2002 bits (1010), Expect = 0.0
Identities = 2086/2443 (85%), Gaps = 15/2443 (0%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| ||||| || ||||| || |||||||| |||||||| || ||||| || || ||
Sbjct: 3380 ttctgagtaggcgaaatgaaaggatcgatcttgacccacagaagggagaagatcgacgcg 3321
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| ||||| || |||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 3320 aggaggatcgaccagacgatgacgatggtcggagtgcggttctgcctgcccatgagaccc 3261
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|| ||||| |||||||| ||||||||||||||||| | ||||| ||||| || || ||
Sbjct: 3260 ttgaggaaggggtagagatggaggatcacccagatggagaagaagagctttccaaagaga 3201
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
||||||||||||||||| || ||||| || ||||| || | || ||||| || || |||
Sbjct: 3200 ggaccccatgattggtaaccgctgttaatggcatatgatatacccgccaccatgcccacc 3141
Query: 655 aggttaatcacaagcacagtggtnnnnnnnatcagaagagttgtccacttgaacacatac 714
||||| || |||||||| ||||| || || ||| | |||||||||||||| ||
Sbjct: 3140 aggttgatgacaagcacggtggtcgggggaatgaggagactggtccacttgaacacgtat 3081
Query: 715 agctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcg 774
||||||||||| |||||||| ||||||| |||||||| || || |||||||| || ||
Sbjct: 3080 agctcagcaaagtcaccatcctcatcggacgcctttgaggtaacagtgaagttggtatca 3021
Query: 775 atccctgctagcacttttaagagaccttggaacacagcaaagagatgtgcagaggtgcca 834
|| ||||||| |||||| | ||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 3020 attcctgctaacactttcagaagaccctggaacacagcgaagagatgggcagatgtgcca 2961
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcga 894
||||||||||| ||||| |||||||||||||| ||||| || |||||||||||||||||
Sbjct: 2960 ccaatgacccagaactgttcatttctccaccagtcctcgataccaacaccactccatcgg 2901
Query: 895 agctccaaaataccagtggcgaagatagaagcaaaaagcaggatgaagaacgccccagca 954
||||||| ||||||||| ||||| || || || |||||||| || |||||| |||||||
Sbjct: 2900 agctccagaataccagttgcgaaaatggaggcgaaaagcagaataaagaacatcccagca 2841
Query: 955 taattgctaatcgcaggaataataaatttgttggtgagtaaacagatagcaggaaggacg 1014
|||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||| ||
Sbjct: 2840 taattgctaatctcaggaatgataaatttgttggtgaggagacagatagcaggaagcaca 2781
Query: 1015 cagtatgctactagtgggatagatgtaattggataaacaatggtgttgatgtatgccagt 1074
|| || || | ||||| || |||||||||||||||||||||||||| ||||| |||||
Sbjct: 2780 caataggcgataagtggaatggatgtaattggataaacaatggtgttaatgtaagccagc 2721
Query: 1075 ctctccagaagctttagccttccattgtaaccataccagataggacagtgtctgctaagt 1134
||||||||||| || | | |||||||||||||||||||||||||| |||||||||||
Sbjct: 2720 ctctccagaagtttcaaacgcccattgtaaccataccagataggacaatgtctgctaagc 2661
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||| ||||| || ||||||||||| |||| ||||||||| ||||||||||| |||||
Sbjct: 2660 agaatctcaacagacccaagagcccaacgtagcacttggttaagacgatcagacagattg 2601
Query: 1195 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaacct 1254
||||| ||||||||||||||||| ||||| |||||||||| ||||| ||||||||||||
Sbjct: 2600 attggcgcagaacccttgaagcatggccgtggtggcatgcaatagattgatatccaacct 2541
Query: 1255 cttgcatgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccg 1314
||||| ||||| || || ||||| | |||||| |||||||| || ||||| ||||| ||
Sbjct: 2540 cttgcgtgcattttaaatccagtcagaatatcctcagtaactgaaccatagatccagcca 2481
Query: 1315 atctctttcccccattctgttttatcctcatatnnccacnaaactaatgnacatgtatag 1374
|||||||| |||||||| ||||| ||||||||| |||| |||| || ||||| || |
Sbjct: 2480 atctcttttccccattcagttttgtcctcatat--ccac--aactgat-aacatggatgg 2426
Query: 1375 cttcctttagcagggaacctgggtttgttgaagggggtatgccaccttgagtcataaaan 1434
||||||| || || || ||||||| ||||| || |||||||| ||||||||||| ||
Sbjct: 2425 cttccttcagtagagatgctgggttcgttgagggtggtatgcctccttgagtcatgaa-- 2368
Query: 1435 naanggggtggatgcaataaaaattggagactggccaaagcgtttctccaagctcttctg 1494
|||||| |||||||||||||| || || ||||| |||||||| || ||||||||
Sbjct: 2367 ------ggtggacgcaataaaaattggcgattgaccaaaacgtttctctaatctcttctg 2314
Query: 1495 agacataagcagtgacctttcatcctcgtaaccttcaaatccctcttctatatcttccat 1554
||||| |||| |||||||||||| || |||||||||| ||||||||||||||||||||
Sbjct: 2313 ggacatcagcactgacctttcatcttcataaccttcaatgccctcttctatatcttccat 2254
Query: 1555 gttgaagatgggagccgaagattctgttctcttcatatcacggtttttggaatcaatata 1614
||| ||||| ||||| ||||| |||||||||||||| |||||||||| ||| || ||
Sbjct: 2253 gttaaagataggagctgaagactctgttctcttcatcatacggtttttgctatccatgta 2194
Query: 1615 gctcttgtccttcttttttcttccgccacagcaacttttaatgataatgttaggctccaa 1674
||||||| ||| || ||||| || |||||||| || |||| | ||||||||| |||||
Sbjct: 2193 gctcttgctctttttctttctgccaccacagcagctcttaacaacaatgttaggttccaa 2134
Query: 1675 atcagcttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcc 1734
|||||| || || | |||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 2133 atcagcctcagttagtacaggatcatagccatacaaggcctgcctattgaagcagcaacc 2074
Query: 1735 tgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaa 1794
||||||||||||||| || || ||||||||||||| ||| ||||| ||||||||||||||
Sbjct: 2073 tgttcccacataaactggaccctgaatgccatctaaacctttcatgttaatatcaaagaa 2014
Query: 1795 gacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaa 1854
||| ||||| || || || |||||||| |||||||| || ||||||||||||||||| ||
Sbjct: 2013 gactatgttgcgattagcgtatcgatcgtgcaagtcaatgccatcaaatctttgtgggaa 1954
Query: 1855 ctgaacatagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctct 1914
||||||||| |||||||||||||||||||| |||||||||||||| ||||| || |||||
Sbjct: 1953 ctgaacataacaagttttccttcctagtgcgggatccatcatgaagcacattgcttctct 1894
Query: 1915 aagagctttgctgctattgaagtagtgatcacaatccacattaagaagataagcaccatt 1974
|||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 1893 aagagctttgctactgttgaagtagtgatcacaatccacattgagaagataggcaccatt 1834
Query: 1975 cgtcaggacagctgatacgcgaatcaaagcattcatggcaccagccttcttgtggtgctg 2034
||||| ||||| ||||| |||||||| |||||||| ||||||||||||||||| |||||
Sbjct: 1833 tgtcagcacagcagatacacgaatcaatgcattcattgcaccagccttcttgtgatgctg 1774
Query: 2035 gaagcctggcctcttttcacgagaaacataaacaagccgtggcaactcattcccatccgt 2094
||| |||||||||||||||||||| || || ||||||||||||||||| || ||||| ||
Sbjct: 1773 gaatcctggcctcttttcacgagagacgtagacaagccgtggcaactcgttaccatcagt 1714
Query: 2095 gtcaagcccaccactgtggcccaagaatacttggatcattccnggatgatctctagggtt 2154
|||||||||||||||||| |||||||| || || ||||| || || ||||| || |||||
Sbjct: 1713 gtcaagcccaccactgtgccccaagaacacctgaatcatgccagggtgatcccttgggtt 1654
Query: 2155 attcccaggccanggagtgccatcagccatggtccagccctcctcaggtattttttgcgc 2214
|||||||||||| | ||||||||||||||||||||| ||||| ||||||| |||||| ||
Sbjct: 1653 attcccaggccaagcagtgccatcagccatggtccacccctcttcaggtactttttgtgc 1594
Query: 2215 ttttgcaacaagggcatcgatccgtactttgaactcttcatactccctcttcatagcccg 2274
|| |||||||| |||| ||||||||| ||||| ||||||||||| |||||||| |||||
Sbjct: 1593 cttcgcaacaagagcattgatccgtaccttgaattcttcatactctctcttcattgcccg 1534
Query: 2275 cctttctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaaa 2334
||||||||| ||||| |||||||| ||||||||||| ||||||||||| ||| |||||||
Sbjct: 1533 cctttctttaacaaaggaaggttggattttgtccttcaggtaatctattttttgagcaaa 1474
Query: 2335 gtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttcct 2394
||||||||||||||| | |||||||| ||||| ||||||||||| |||||||| |||||
Sbjct: 1473 gtaaaactctggagctcgtggttcaatattgtgcttcttgcaaaacggaacccacttcct 1414
Query: 2395 tgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcaga 2454
||||| ||||| ||||| || ||||| |||||||| |||||||||||||| || |||||
Sbjct: 1413 agcaaattctgcagtttctgacagagcctcaaaagttaacatagctgaaccatcgtcaga 1354
Query: 2455 aacataacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgtt 2514
|||||| ||||| |||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 1353 aacatagcatgacactttgtcaacagggtaatccacagccagaatggacaaaacagtgtt 1294
Query: 2515 gccagtaattagaggaggttccttaagtggatccactgtactaacaaagacatcgattgg 2574
| || || |||||||||||||| ||||||||||| ||||| ||||||||||| || ||
Sbjct: 1293 tgctgtgatcagaggaggttcctttagtggatccaccgtactgacaaagacatcaatggg 1234
Query: 2575 agccaactgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagt 2634
||| | ||| |||||||| |||||||||||||||||||||||||| || || ||||| ||
Sbjct: 1233 agcaagctgtgatggctctccctccctatcatatctcaatgcaagcctgtcaaggtatgt 1174
Query: 2635 ttcacggttgataggataccactttgggaactgatctagaagccaagacaaagcaaacca 2694
||||||||| || || |||||||||||||| |||||||| ||||| || || ||||||||
Sbjct: 1173 ttcacggtttatcgggtaccactttgggaattgatctaggagccaggataaggcaaacca 1114
Query: 2695 aacttcacaaataacagatacaagccacaacccataagcatcttccactggatgagttat 2754
|| |||||| ||||||||||| |||||||| ||||||||||| |||||||||||| |
Sbjct: 1113 aatttcacagataacagatactagccacaatccataagcatcccgcactggatgagtgac 1054
Query: 2755 acgatattgaaagaagaaacat-aggatgataagccggagaacaatcacgatccgataaa 2813
||||||||| |||||| ||||| ||||||||||| ||||||| || || ||||| ||||
Sbjct: 1053 acgatattggaagaag-aacatcaggatgataagacggagaatgataacaatccggtaaa 995
Query: 2814 ggttaagctcgtttggagatatcggcactatgcgacttagagg 2856
|||| |||| ||||| || || ||||||||||| || |||||
Sbjct: 994 ggttgagctggtttgaagggataggcactatgcggctcagagg 952
>dbj|AK099228.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091P03, full
insert sequence
Length = 3732
Score = 2002 bits (1010), Expect = 0.0
Identities = 2086/2443 (85%), Gaps = 15/2443 (0%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| ||||| || ||||| || |||||||| |||||||| || ||||| || || ||
Sbjct: 3380 ttctgagtaggcgaaatgaaaggatcgatcttgacccacagaagggagaagatcgacgcg 3321
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| ||||| || |||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 3320 aggaggatcgaccagacgatgacgatggtcggagtgcggttctgcctgcccatgagaccc 3261
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|| ||||| |||||||| ||||||||||||||||| | ||||| ||||| || || ||
Sbjct: 3260 ttgaggaaggggtagagatggaggatcacccagatggagaagaagagctttccaaagaga 3201
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
||||||||||||||||| || ||||| || ||||| || | || ||||| || || |||
Sbjct: 3200 ggaccccatgattggtaaccgctgttaatggcatatgatatacccgccaccatgcccacc 3141
Query: 655 aggttaatcacaagcacagtggtnnnnnnnatcagaagagttgtccacttgaacacatac 714
||||| || |||||||| ||||| || || ||| | |||||||||||||| ||
Sbjct: 3140 aggttgatgacaagcacggtggtcgggggaatgaggagactggtccacttgaacacgtat 3081
Query: 715 agctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcg 774
||||||||||| |||||||| ||||||| |||||||| || || |||||||| || ||
Sbjct: 3080 agctcagcaaagtcaccatcctcatcggacgcctttgaggtaacagtgaagttggtatca 3021
Query: 775 atccctgctagcacttttaagagaccttggaacacagcaaagagatgtgcagaggtgcca 834
|| ||||||| |||||| | ||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 3020 attcctgctaacactttcagaagaccctggaacacagcgaagagatgggcagatgtgcca 2961
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcga 894
||||||||||| ||||| |||||||||||||| ||||| || |||||||||||||||||
Sbjct: 2960 ccaatgacccagaactgttcatttctccaccagtcctcgataccaacaccactccatcgg 2901
Query: 895 agctccaaaataccagtggcgaagatagaagcaaaaagcaggatgaagaacgccccagca 954
||||||| ||||||||| ||||| || || || |||||||| || |||||| |||||||
Sbjct: 2900 agctccagaataccagttgcgaaaatggaggcgaaaagcagaataaagaacatcccagca 2841
Query: 955 taattgctaatcgcaggaataataaatttgttggtgagtaaacagatagcaggaaggacg 1014
|||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||| ||
Sbjct: 2840 taattgctaatctcaggaatgataaatttgttggtgaggagacagatagcaggaagcaca 2781
Query: 1015 cagtatgctactagtgggatagatgtaattggataaacaatggtgttgatgtatgccagt 1074
|| || || | ||||| || |||||||||||||||||||||||||| ||||| |||||
Sbjct: 2780 caataggcgataagtggaatggatgtaattggataaacaatggtgttaatgtaagccagc 2721
Query: 1075 ctctccagaagctttagccttccattgtaaccataccagataggacagtgtctgctaagt 1134
||||||||||| || | | |||||||||||||||||||||||||| |||||||||||
Sbjct: 2720 ctctccagaagtttcaaacgcccattgtaaccataccagataggacaatgtctgctaagc 2661
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||| ||||| || ||||||||||| |||| ||||||||| ||||||||||| |||||
Sbjct: 2660 agaatctcaacagacccaagagcccaacgtagcacttggttaagacgatcagacagattg 2601
Query: 1195 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaacct 1254
||||| ||||||||||||||||| ||||| |||||||||| ||||| ||||||||||||
Sbjct: 2600 attggcgcagaacccttgaagcatggccgtggtggcatgcaatagattgatatccaacct 2541
Query: 1255 cttgcatgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccg 1314
||||| ||||| || || ||||| | |||||| |||||||| || ||||| ||||| ||
Sbjct: 2540 cttgcgtgcattttaaatccagtcagaatatcctcagtaactgaaccatagatccagcca 2481
Query: 1315 atctctttcccccattctgttttatcctcatatnnccacnaaactaatgnacatgtatag 1374
|||||||| |||||||| ||||| ||||||||| |||| |||| || ||||| || |
Sbjct: 2480 atctcttttccccattcagttttgtcctcatat--ccac--aactgat-aacatggatgg 2426
Query: 1375 cttcctttagcagggaacctgggtttgttgaagggggtatgccaccttgagtcataaaan 1434
||||||| || || || ||||||| ||||| || |||||||| ||||||||||| ||
Sbjct: 2425 cttccttcagtagagatgctgggttcgttgagggtggtatgcctccttgagtcatgaa-- 2368
Query: 1435 naanggggtggatgcaataaaaattggagactggccaaagcgtttctccaagctcttctg 1494
|||||| |||||||||||||| || || ||||| |||||||| || ||||||||
Sbjct: 2367 ------ggtggacgcaataaaaattggcgattgaccaaaacgtttctctaatctcttctg 2314
Query: 1495 agacataagcagtgacctttcatcctcgtaaccttcaaatccctcttctatatcttccat 1554
||||| |||| |||||||||||| || |||||||||| ||||||||||||||||||||
Sbjct: 2313 ggacatcagcactgacctttcatcttcataaccttcaatgccctcttctatatcttccat 2254
Query: 1555 gttgaagatgggagccgaagattctgttctcttcatatcacggtttttggaatcaatata 1614
||| ||||| ||||| ||||| |||||||||||||| |||||||||| ||| || ||
Sbjct: 2253 gttaaagataggagctgaagactctgttctcttcatcatacggtttttgctatccatgta 2194
Query: 1615 gctcttgtccttcttttttcttccgccacagcaacttttaatgataatgttaggctccaa 1674
||||||| ||| || ||||| || |||||||| || |||| | ||||||||| |||||
Sbjct: 2193 gctcttgctctttttctttctgccaccacagcagctcttaacaacaatgttaggttccaa 2134
Query: 1675 atcagcttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcc 1734
|||||| || || | |||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 2133 atcagcctcagttagtacaggatcatagccatacaaggcctgcctattgaagcagcaacc 2074
Query: 1735 tgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaa 1794
||||||||||||||| || || ||||||||||||| ||| ||||| ||||||||||||||
Sbjct: 2073 tgttcccacataaactggaccctgaatgccatctaaacctttcatgttaatatcaaagaa 2014
Query: 1795 gacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaa 1854
||| ||||| || || || |||||||| |||||||| || ||||||||||||||||| ||
Sbjct: 2013 gactatgttgcgattagcgtatcgatcgtgcaagtcaatgccatcaaatctttgtgggaa 1954
Query: 1855 ctgaacatagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctct 1914
||||||||| |||||||||||||||||||| |||||||||||||| ||||| || |||||
Sbjct: 1953 ctgaacataacaagttttccttcctagtgcgggatccatcatgaagcacattgcttctct 1894
Query: 1915 aagagctttgctgctattgaagtagtgatcacaatccacattaagaagataagcaccatt 1974
|||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 1893 aagagctttgctactgttgaagtagtgatcacaatccacattgagaagataggcaccatt 1834
Query: 1975 cgtcaggacagctgatacgcgaatcaaagcattcatggcaccagccttcttgtggtgctg 2034
||||| ||||| ||||| |||||||| |||||||| ||||||||||||||||| |||||
Sbjct: 1833 tgtcagcacagcagatacacgaatcaatgcattcattgcaccagccttcttgtgatgctg 1774
Query: 2035 gaagcctggcctcttttcacgagaaacataaacaagccgtggcaactcattcccatccgt 2094
||| |||||||||||||||||||| || || ||||||||||||||||| || ||||| ||
Sbjct: 1773 gaatcctggcctcttttcacgagagacgtagacaagccgtggcaactcgttaccatcagt 1714
Query: 2095 gtcaagcccaccactgtggcccaagaatacttggatcattccnggatgatctctagggtt 2154
|||||||||||||||||| |||||||| || || ||||| || || ||||| || |||||
Sbjct: 1713 gtcaagcccaccactgtgccccaagaacacctgaatcatgccagggtgatcccttgggtt 1654
Query: 2155 attcccaggccanggagtgccatcagccatggtccagccctcctcaggtattttttgcgc 2214
|||||||||||| | ||||||||||||||||||||| ||||| ||||||| |||||| ||
Sbjct: 1653 attcccaggccaagcagtgccatcagccatggtccacccctcttcaggtactttttgtgc 1594
Query: 2215 ttttgcaacaagggcatcgatccgtactttgaactcttcatactccctcttcatagcccg 2274
|| |||||||| |||| ||||||||| ||||| ||||||||||| |||||||| |||||
Sbjct: 1593 cttcgcaacaagagcattgatccgtaccttgaattcttcatactctctcttcattgcccg 1534
Query: 2275 cctttctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaaa 2334
||||||||| ||||| |||||||| ||||||||||| ||||||||||| ||| |||||||
Sbjct: 1533 cctttctttaacaaaggaaggttggattttgtccttcaggtaatctattttttgagcaaa 1474
Query: 2335 gtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttcct 2394
||||||||||||||| | |||||||| ||||| ||||||||||| |||||||| |||||
Sbjct: 1473 gtaaaactctggagctcgtggttcaatattgtgcttcttgcaaaacggaacccacttcct 1414
Query: 2395 tgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcaga 2454
||||| ||||| ||||| || ||||| |||||||| |||||||||||||| || |||||
Sbjct: 1413 agcaaattctgcagtttctgacagagcctcaaaagttaacatagctgaaccatcgtcaga 1354
Query: 2455 aacataacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgtt 2514
|||||| ||||| |||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 1353 aacatagcatgacactttgtcaacagggtaatccacagccagaatggacaaaacagtgtt 1294
Query: 2515 gccagtaattagaggaggttccttaagtggatccactgtactaacaaagacatcgattgg 2574
| || || |||||||||||||| ||||||||||| ||||| ||||||||||| || ||
Sbjct: 1293 tgctgtgatcagaggaggttcctttagtggatccaccgtactgacaaagacatcaatggg 1234
Query: 2575 agccaactgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagt 2634
||| | ||| |||||||| |||||||||||||||||||||||||| || || ||||| ||
Sbjct: 1233 agcaagctgtgatggctctccctccctatcatatctcaatgcaagcctgtcaaggtatgt 1174
Query: 2635 ttcacggttgataggataccactttgggaactgatctagaagccaagacaaagcaaacca 2694
||||||||| || || |||||||||||||| |||||||| ||||| || || ||||||||
Sbjct: 1173 ttcacggtttatcgggtaccactttgggaattgatctaggagccaggataaggcaaacca 1114
Query: 2695 aacttcacaaataacagatacaagccacaacccataagcatcttccactggatgagttat 2754
|| |||||| ||||||||||| |||||||| ||||||||||| |||||||||||| |
Sbjct: 1113 aatttcacagataacagatactagccacaatccataagcatcccgcactggatgagtgac 1054
Query: 2755 acgatattgaaagaagaaacat-aggatgataagccggagaacaatcacgatccgataaa 2813
||||||||| |||||| ||||| ||||||||||| ||||||| || || ||||| ||||
Sbjct: 1053 acgatattggaagaag-aacatcaggatgataagacggagaatgataacaatccggtaaa 995
Query: 2814 ggttaagctcgtttggagatatcggcactatgcgacttagagg 2856
|||| |||| ||||| || || ||||||||||| || |||||
Sbjct: 994 ggttgagctggtttgaagggataggcactatgcggctcagagg 952
>dbj|AK099281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125F05, full
insert sequence
Length = 3801
Score = 2002 bits (1010), Expect = 0.0
Identities = 2086/2443 (85%), Gaps = 15/2443 (0%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| ||||| || ||||| || |||||||| |||||||| || ||||| || || ||
Sbjct: 3380 ttctgagtaggcgaaatgaaaggatcgatcttgacccacagaagggagaagatcgacgcg 3321
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| ||||| || |||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 3320 aggaggatcgaccagacgatgacgatggtcggagtgcggttctgcctgcccatgagaccc 3261
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|| ||||| |||||||| ||||||||||||||||| | ||||| ||||| || || ||
Sbjct: 3260 ttgaggaaggggtagagatggaggatcacccagatggagaagaagagctttccaaagaga 3201
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
||||||||||||||||| || ||||| || ||||| || | || ||||| || || |||
Sbjct: 3200 ggaccccatgattggtaaccgctgttaatggcatatgatatacccgccaccatgcccacc 3141
Query: 655 aggttaatcacaagcacagtggtnnnnnnnatcagaagagttgtccacttgaacacatac 714
||||| || |||||||| ||||| || || ||| | |||||||||||||| ||
Sbjct: 3140 aggttgatgacaagcacggtggtcgggggaatgaggagactggtccacttgaacacgtat 3081
Query: 715 agctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcg 774
||||||||||| |||||||| ||||||| |||||||| || || |||||||| || ||
Sbjct: 3080 agctcagcaaagtcaccatcctcatcgggcgcctttgaggtaacagtgaagttggtatca 3021
Query: 775 atccctgctagcacttttaagagaccttggaacacagcaaagagatgtgcagaggtgcca 834
|| ||||||| |||||| | ||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 3020 attcctgctaacactttcagaagaccctggaacacagcgaagagatgggcagatgtgcca 2961
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcga 894
||||||||||| ||||| |||||||||||||| ||||| || |||||||||||||||||
Sbjct: 2960 ccaatgacccagaactgttcatttctccaccagtcctcgataccaacaccactccatcgg 2901
Query: 895 agctccaaaataccagtggcgaagatagaagcaaaaagcaggatgaagaacgccccagca 954
||||||| ||||||||| ||||| || || || |||||||| || |||||| |||||||
Sbjct: 2900 agctccagaataccagttgcgaaaatggaggcgaaaagcagaataaagaacatcccagca 2841
Query: 955 taattgctaatcgcaggaataataaatttgttggtgagtaaacagatagcaggaaggacg 1014
|||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||| ||
Sbjct: 2840 taattgctaatctcaggaatgataaatttgttggtgaggagacagatagcaggaagcaca 2781
Query: 1015 cagtatgctactagtgggatagatgtaattggataaacaatggtgttgatgtatgccagt 1074
|| || || | ||||| || |||||||||||||||||||||||||| ||||| |||||
Sbjct: 2780 caataggcgataagtggaatggatgtaattggataaacaatggtgttaatgtaagccagc 2721
Query: 1075 ctctccagaagctttagccttccattgtaaccataccagataggacagtgtctgctaagt 1134
||||||||||| || | | |||||||||||||||||||||||||| |||||||||||
Sbjct: 2720 ctctccagaagtttcaaacgcccattgtaaccataccagataggacaatgtctgctaagc 2661
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||| ||||| || ||||||||||| |||| ||||||||| ||||||||||| |||||
Sbjct: 2660 agaatctcaacagacccaagagcccaacgtagcacttggttaagacgatcagacagattg 2601
Query: 1195 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaacct 1254
||||| ||||||||||||||||| ||||| |||||||||| ||||| ||||||||||||
Sbjct: 2600 attggcgcagaacccttgaagcatggccgtggtggcatgcaatagattgatatccaacct 2541
Query: 1255 cttgcatgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccg 1314
||||| ||||| || || ||||| | |||||| |||||||| || ||||| ||||| ||
Sbjct: 2540 cttgcgtgcattttaaatccagtcagaatatcctcagtaactgaaccatagatccagcca 2481
Query: 1315 atctctttcccccattctgttttatcctcatatnnccacnaaactaatgnacatgtatag 1374
|||||||| |||||||| ||||| ||||||||| |||| |||| || ||||| || |
Sbjct: 2480 atctcttttccccattcagttttgtcctcatat--ccac--aactgat-aacatggatgg 2426
Query: 1375 cttcctttagcagggaacctgggtttgttgaagggggtatgccaccttgagtcataaaan 1434
||||||| || || || ||||||| ||||| || |||||||| ||||||||||| ||
Sbjct: 2425 cttccttcagtagagatgctgggttcgttgagggtggtatgcctccttgagtcatgaa-- 2368
Query: 1435 naanggggtggatgcaataaaaattggagactggccaaagcgtttctccaagctcttctg 1494
|||||| |||||||||||||| || || ||||| |||||||| || ||||||||
Sbjct: 2367 ------ggtggacgcaataaaaattggcgattgaccaaaacgtttctctaatctcttctg 2314
Query: 1495 agacataagcagtgacctttcatcctcgtaaccttcaaatccctcttctatatcttccat 1554
||||| |||| |||||||||||| || |||||||||| ||||||||||||||||||||
Sbjct: 2313 ggacatcagcactgacctttcatcttcataaccttcaatgccctcttctatatcttccat 2254
Query: 1555 gttgaagatgggagccgaagattctgttctcttcatatcacggtttttggaatcaatata 1614
||| ||||| ||||| ||||| |||||||||||||| |||||||||| ||| || ||
Sbjct: 2253 gttaaagataggagctgaagactctgttctcttcatcatacggtttttgctatccatgta 2194
Query: 1615 gctcttgtccttcttttttcttccgccacagcaacttttaatgataatgttaggctccaa 1674
||||||| ||| || ||||| || |||||||| || |||| | ||||||||| |||||
Sbjct: 2193 gctcttgctctttttctttctgccaccacagcagctcttaacaacaatgttaggttccaa 2134
Query: 1675 atcagcttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcc 1734
|||||| || || | |||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 2133 atcagcctcagttagtacaggatcatagccatacaaggcctgcctattgaagcagcaacc 2074
Query: 1735 tgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaa 1794
||||||||||||||| || || ||||||||||||| ||| ||||| ||||||||||||||
Sbjct: 2073 tgttcccacataaactggaccctgaatgccatctaaacctttcatgttaatatcaaagaa 2014
Query: 1795 gacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaa 1854
||| ||||| || || || |||||||| |||||||| || ||||||||||||||||| ||
Sbjct: 2013 gactatgttgcgattagcgtatcgatcgtgcaagtcaatgccatcaaatctttgtgggaa 1954
Query: 1855 ctgaacatagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctct 1914
||||||||| |||||||||||||||||||| |||||||||||||| ||||| || |||||
Sbjct: 1953 ctgaacataacaagttttccttcctagtgcgggatccatcatgaagcacattgcttctct 1894
Query: 1915 aagagctttgctgctattgaagtagtgatcacaatccacattaagaagataagcaccatt 1974
|||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 1893 aagagctttgctactgttgaagtagtgatcacaatccacattgagaagataggcaccatt 1834
Query: 1975 cgtcaggacagctgatacgcgaatcaaagcattcatggcaccagccttcttgtggtgctg 2034
||||| ||||| ||||| |||||||| |||||||| ||||||||||||||||| |||||
Sbjct: 1833 tgtcagcacagcagatacacgaatcaatgcattcattgcaccagccttcttgtgatgctg 1774
Query: 2035 gaagcctggcctcttttcacgagaaacataaacaagccgtggcaactcattcccatccgt 2094
||| |||||||||||||||||||| || || ||||||||||||||||| || ||||| ||
Sbjct: 1773 gaatcctggcctcttttcacgagagacgtagacaagccgtggcaactcgttaccatcagt 1714
Query: 2095 gtcaagcccaccactgtggcccaagaatacttggatcattccnggatgatctctagggtt 2154
|||||||||||||||||| |||||||| || || ||||| || || ||||| || |||||
Sbjct: 1713 gtcaagcccaccactgtgccccaagaacacctgaatcatgccagggtgatcccttgggtt 1654
Query: 2155 attcccaggccanggagtgccatcagccatggtccagccctcctcaggtattttttgcgc 2214
|||||||||||| | ||||||||||||||||||||| ||||| ||||||| |||||| ||
Sbjct: 1653 attcccaggccaagcagtgccatcagccatggtccacccctcttcaggtactttttgtgc 1594
Query: 2215 ttttgcaacaagggcatcgatccgtactttgaactcttcatactccctcttcatagcccg 2274
|| |||||||| |||| ||||||||| ||||| ||||||||||| |||||||| |||||
Sbjct: 1593 cttcgcaacaagagcattgatccgtaccttgaattcttcatactctctcttcattgcccg 1534
Query: 2275 cctttctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaaa 2334
||||||||| ||||| |||||||| ||||||||||| ||||||||||| ||| |||||||
Sbjct: 1533 cctttctttaacaaaggaaggttggattttgtccttcaggtaatctattttttgagcaaa 1474
Query: 2335 gtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttcct 2394
||||||||||||||| | |||||||| ||||| ||||||||||| |||||||| |||||
Sbjct: 1473 gtaaaactctggagctcgtggttcaatattgtgcttcttgcaaaacggaacccacttcct 1414
Query: 2395 tgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcaga 2454
||||| ||||| ||||| || ||||| |||||||| |||||||||||||| || |||||
Sbjct: 1413 agcaaattctgcagtttctgacagagcctcaaaagttaacatagctgaaccatcgtcaga 1354
Query: 2455 aacataacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgtt 2514
|||||| ||||| |||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 1353 aacatagcatgacactttgtcaacagggtaatccacagccagaatggacaaaacagtgtt 1294
Query: 2515 gccagtaattagaggaggttccttaagtggatccactgtactaacaaagacatcgattgg 2574
| || || |||||||||||||| ||||||||||| ||||| ||||||||||| || ||
Sbjct: 1293 tgctgtgatcagaggaggttcctttagtggatccaccgtactgacaaagacatcaatggg 1234
Query: 2575 agccaactgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagt 2634
||| | ||| |||||||| |||||||||||||||||||||||||| || || ||||| ||
Sbjct: 1233 agcaagctgtgatggctctccctccctatcatatctcaatgcaagcctgtcaaggtatgt 1174
Query: 2635 ttcacggttgataggataccactttgggaactgatctagaagccaagacaaagcaaacca 2694
||||||||| || || |||||||||||||| |||||||| ||||| || || ||||||||
Sbjct: 1173 ttcacggtttatcgggtaccactttgggaattgatctaggagccaggataaggcaaacca 1114
Query: 2695 aacttcacaaataacagatacaagccacaacccataagcatcttccactggatgagttat 2754
|| |||||| ||||||||||| |||||||| ||||||||||| |||||||||||| |
Sbjct: 1113 aatttcacagataacagatactagccacaatccataagcatcccgcactggatgagtgac 1054
Query: 2755 acgatattgaaagaagaaacat-aggatgataagccggagaacaatcacgatccgataaa 2813
||||||||| |||||| ||||| ||||||||||| ||||||| || || ||||| ||||
Sbjct: 1053 acgatattggaagaag-aacatcaggatgataagacggagaatgataacaatccggtaaa 995
Query: 2814 ggttaagctcgtttggagatatcggcactatgcgacttagagg 2856
|||| |||| ||||| || || ||||||||||| || |||||
Sbjct: 994 ggttgagctggtttgaagggataggcactatgcggctcagagg 952
>dbj|AK102140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085K01, full
insert sequence
Length = 3768
Score = 2002 bits (1010), Expect = 0.0
Identities = 2086/2443 (85%), Gaps = 15/2443 (0%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| ||||| || ||||| || |||||||| |||||||| || ||||| || || ||
Sbjct: 3380 ttctgagtaggcgaaatgaaaggatcgatcttgacccacagaagggagaagatcgacgcg 3321
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| ||||| || |||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 3320 aggaggatcgaccagacgatgacgatggtcggagtgcggttctgcctgcccatgagaccc 3261
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|| ||||| |||||||| ||||||||||||||||| | ||||| ||||| || || ||
Sbjct: 3260 ttgaggaaggggtagagatggaggatcacccagatggagaagaagagctttccaaagaga 3201
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
||||||||||||||||| || ||||| || ||||| || | || ||||| || || |||
Sbjct: 3200 ggaccccatgattggtaaccgctgttaatggcatatgatatacccgccaccatgcccacc 3141
Query: 655 aggttaatcacaagcacagtggtnnnnnnnatcagaagagttgtccacttgaacacatac 714
||||| || |||||||| ||||| || || ||| | |||||||||||||| ||
Sbjct: 3140 aggttgatgacaagcacggtggtcgggggaatgaggagactggtccacttgaacacgtat 3081
Query: 715 agctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcg 774
||||||||||| |||||||| ||||||| |||||||| || || |||||||| || ||
Sbjct: 3080 agctcagcaaagtcaccatcctcatcggacgcctttgaggtaacagtgaagttggtatca 3021
Query: 775 atccctgctagcacttttaagagaccttggaacacagcaaagagatgtgcagaggtgcca 834
|| ||||||| |||||| | ||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 3020 attcctgctaacactttcagaagaccctggaacacagcgaagagatgggcagatgtgcca 2961
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcga 894
||||||||||| ||||| |||||||||||||| ||||| || |||||||||||||||||
Sbjct: 2960 ccaatgacccagaactgttcatttctccaccagtcctcgataccaacaccactccatcgg 2901
Query: 895 agctccaaaataccagtggcgaagatagaagcaaaaagcaggatgaagaacgccccagca 954
||||||| ||||||||| ||||| || || || |||||||| || |||||| |||||||
Sbjct: 2900 agctccagaataccagttgcgaaaatggaggcgaaaagcagaataaagaacatcccagca 2841
Query: 955 taattgctaatcgcaggaataataaatttgttggtgagtaaacagatagcaggaaggacg 1014
|||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||| ||
Sbjct: 2840 taattgctaatctcaggaatgataaatttgttggtgaggagacagatagcaggaagcaca 2781
Query: 1015 cagtatgctactagtgggatagatgtaattggataaacaatggtgttgatgtatgccagt 1074
|| || || | ||||| || |||||||||||||||||||||||||| ||||| |||||
Sbjct: 2780 caataggcgataagtggaatggatgtaattggataaacaatggtgttaatgtaagccagc 2721
Query: 1075 ctctccagaagctttagccttccattgtaaccataccagataggacagtgtctgctaagt 1134
||||||||||| || | | |||||||||||||||||||||||||| |||||||||||
Sbjct: 2720 ctctccagaagtttcaaacgcccattgtaaccataccagataggacaatgtctgctaagc 2661
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||| ||||| || ||||||||||| |||| ||||||||| ||||||||||| |||||
Sbjct: 2660 agaatctcaacagacccaagagcccaacgtagcacttggttaagacgatcagacagattg 2601
Query: 1195 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaacct 1254
||||| ||||||||||||||||| ||||| |||||||||| ||||| ||||||||||||
Sbjct: 2600 attggcgcagaacccttgaagcatggccgtggtggcatgcaatagattgatatccaacct 2541
Query: 1255 cttgcatgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccg 1314
||||| ||||| || || ||||| | |||||| |||||||| || ||||| ||||| ||
Sbjct: 2540 cttgcgtgcattttaaatccagtcagaatatcctcagtaactgaaccatagatccagcca 2481
Query: 1315 atctctttcccccattctgttttatcctcatatnnccacnaaactaatgnacatgtatag 1374
|||||||| |||||||| ||||| ||||||||| |||| |||| || ||||| || |
Sbjct: 2480 atctcttttccccattcagttttgtcctcatat--ccac--aactgat-aacatggatgg 2426
Query: 1375 cttcctttagcagggaacctgggtttgttgaagggggtatgccaccttgagtcataaaan 1434
||||||| || || || ||||||| ||||| || |||||||| ||||||||||| ||
Sbjct: 2425 cttccttcagtagagatgctgggttcgttgagggtggtatgcctccttgagtcatgaa-- 2368
Query: 1435 naanggggtggatgcaataaaaattggagactggccaaagcgtttctccaagctcttctg 1494
|||||| |||||||||||||| || || ||||| |||||||| || ||||||||
Sbjct: 2367 ------ggtggacgcaataaaaattggcgattgaccaaaacgtttctctaatctcttctg 2314
Query: 1495 agacataagcagtgacctttcatcctcgtaaccttcaaatccctcttctatatcttccat 1554
||||| |||| |||||||||||| || |||||||||| ||||||||||||||||||||
Sbjct: 2313 ggacatcagcactgacctttcatcttcataaccttcaatgccctcttctatatcttccat 2254
Query: 1555 gttgaagatgggagccgaagattctgttctcttcatatcacggtttttggaatcaatata 1614
||| ||||| ||||| ||||| |||||||||||||| |||||||||| ||| || ||
Sbjct: 2253 gttaaagataggagctgaagactctgttctcttcatcatacggtttttgctatccatgta 2194
Query: 1615 gctcttgtccttcttttttcttccgccacagcaacttttaatgataatgttaggctccaa 1674
||||||| ||| || ||||| || |||||||| || |||| | ||||||||| |||||
Sbjct: 2193 gctcttgctctttttctttctgccaccacagcagctcttaacaacaatgttaggttccaa 2134
Query: 1675 atcagcttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcc 1734
|||||| || || | |||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 2133 atcagcctcagttagtacaggatcatagccatacaaggcctgcctattgaagcagcaacc 2074
Query: 1735 tgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaa 1794
||||||||||||||| || || ||||||||||||| ||| ||||| ||||||||||||||
Sbjct: 2073 tgttcccacataaactggaccctgaatgccatctaaacctttcatgttaatatcaaagaa 2014
Query: 1795 gacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaa 1854
||| ||||| || || || |||||||| |||||||| || ||||||||||||||||| ||
Sbjct: 2013 gactatgttgcgattagcgtatcgatcgtgcaagtcaatgccatcaaatctttgtgggaa 1954
Query: 1855 ctgaacatagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctct 1914
||||||||| |||||||||||||||||||| |||||||||||||| ||||| || |||||
Sbjct: 1953 ctgaacataacaagttttccttcctagtgcgggatccatcatgaagcacattgcttctct 1894
Query: 1915 aagagctttgctgctattgaagtagtgatcacaatccacattaagaagataagcaccatt 1974
|||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 1893 aagagctttgctactgttgaagtagtgatcacaatccacattgagaagataggcaccatt 1834
Query: 1975 cgtcaggacagctgatacgcgaatcaaagcattcatggcaccagccttcttgtggtgctg 2034
||||| ||||| ||||| |||||||| |||||||| ||||||||||||||||| |||||
Sbjct: 1833 tgtcagcacagcagatacacgaatcaatgcattcattgcaccagccttcttgtgatgctg 1774
Query: 2035 gaagcctggcctcttttcacgagaaacataaacaagccgtggcaactcattcccatccgt 2094
||| |||||||||||||||||||| || || ||||||||||||||||| || ||||| ||
Sbjct: 1773 gaatcctggcctcttttcacgagagacgtagacaagccgtggcaactcgttaccatcagt 1714
Query: 2095 gtcaagcccaccactgtggcccaagaatacttggatcattccnggatgatctctagggtt 2154
|||||||||||||||||| |||||||| || || ||||| || || ||||| || |||||
Sbjct: 1713 gtcaagcccaccactgtgccccaagaacacctgaatcatgccagggtgatcccttgggtt 1654
Query: 2155 attcccaggccanggagtgccatcagccatggtccagccctcctcaggtattttttgcgc 2214
|||||||||||| | ||||||||||||||||||||| ||||| ||||||| |||||| ||
Sbjct: 1653 attcccaggccaagcagtgccatcagccatggtccacccctcttcaggtactttttgtgc 1594
Query: 2215 ttttgcaacaagggcatcgatccgtactttgaactcttcatactccctcttcatagcccg 2274
|| |||||||| |||| ||||||||| ||||| ||||||||||| |||||||| |||||
Sbjct: 1593 cttcgcaacaagagcattgatccgtaccttgaattcttcatactctctcttcattgcccg 1534
Query: 2275 cctttctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaaa 2334
||||||||| ||||| |||||||| ||||||||||| ||||||||||| ||| |||||||
Sbjct: 1533 cctttctttaacaaaggaaggttggattttgtccttcaggtaatctattttttgagcaaa 1474
Query: 2335 gtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttcct 2394
||||||||||||||| | |||||||| ||||| ||||||||||| |||||||| |||||
Sbjct: 1473 gtaaaactctggagctcgtggttcaatattgtgcttcttgcaaaacggaacccacttcct 1414
Query: 2395 tgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcaga 2454
||||| ||||| ||||| || ||||| |||||||| |||||||||||||| || |||||
Sbjct: 1413 agcaaattctgcagtttctgacagagcctcaaaagttaacatagctgaaccatcgtcaga 1354
Query: 2455 aacataacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgtt 2514
|||||| ||||| |||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 1353 aacatagcatgacactttgtcaacagggtaatccacagccagaatggacaaaacagtgtt 1294
Query: 2515 gccagtaattagaggaggttccttaagtggatccactgtactaacaaagacatcgattgg 2574
| || || |||||||||||||| ||||||||||| ||||| ||||||||||| || ||
Sbjct: 1293 tgctgtgatcagaggaggttcctttagtggatccaccgtactgacaaagacatcaatggg 1234
Query: 2575 agccaactgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagt 2634
||| | ||| |||||||| |||||||||||||||||||||||||| || || ||||| ||
Sbjct: 1233 agcaagctgtgatggctctccctccctatcatatctcaatgcaagcctgtcaaggtatgt 1174
Query: 2635 ttcacggttgataggataccactttgggaactgatctagaagccaagacaaagcaaacca 2694
||||||||| || || |||||||||||||| |||||||| ||||| || || ||||||||
Sbjct: 1173 ttcacggtttatcgggtaccactttgggaattgatctaggagccaggataaggcaaacca 1114
Query: 2695 aacttcacaaataacagatacaagccacaacccataagcatcttccactggatgagttat 2754
|| |||||| ||||||||||| |||||||| ||||||||||| |||||||||||| |
Sbjct: 1113 aatttcacagataacagatactagccacaatccataagcatcccgcactggatgagtgac 1054
Query: 2755 acgatattgaaagaagaaacat-aggatgataagccggagaacaatcacgatccgataaa 2813
||||||||| |||||| ||||| ||||||||||| ||||||| || || ||||| ||||
Sbjct: 1053 acgatattggaagaag-aacatcaggatgataagacggagaatgataacaatccggtaaa 995
Query: 2814 ggttaagctcgtttggagatatcggcactatgcgacttagagg 2856
|||| |||| ||||| || || ||||||||||| || |||||
Sbjct: 994 ggttgagctggtttgaagggataggcactatgcggctcagagg 952
>dbj|AK100188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034D20, full
insert sequence
Length = 3897
Score = 1994 bits (1006), Expect = 0.0
Identities = 2085/2443 (85%), Gaps = 15/2443 (0%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| ||||| || ||||| || |||||||| |||||||| || ||||| || || ||
Sbjct: 3380 ttctgagtaggcgaaatgaaaggatcgatcttgacccacagaagggagaagatcgacgcg 3321
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| ||||| || |||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 3320 aggaggatcgaccagacgatgacgatggtcggagtgcggttctgcctgcccatgagaccc 3261
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|| ||||| |||||||| ||||||||||||||||| | ||||| ||||| || || ||
Sbjct: 3260 ttgaggaaggggtagagatggaggatcacccagatggagaagaagagctttccaaagaga 3201
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
||||||||||||||||| || ||||| || ||||| || | || ||||| || || |||
Sbjct: 3200 ggaccccatgattggtaaccgctgttaatggcatatgatatacccgccaccatgcccacc 3141
Query: 655 aggttaatcacaagcacagtggtnnnnnnnatcagaagagttgtccacttgaacacatac 714
||||| || |||||||| ||||| || || ||| | |||||||||||||| ||
Sbjct: 3140 aggttgatgacaagcacggtggtcgggggaatgaggagactggtccacttgaacacgtat 3081
Query: 715 agctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcg 774
||||||||||| |||||||| ||||||| |||||||| || || |||||||| || ||
Sbjct: 3080 agctcagcaaagtcaccatcctcatcggacgcctttgaggtaacagtgaagttggtatca 3021
Query: 775 atccctgctagcacttttaagagaccttggaacacagcaaagagatgtgcagaggtgcca 834
|| ||||||| |||||| | ||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 3020 attcctgctaacactttcagaagaccctggaacacagcgaagagatgggcagatgtgcca 2961
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcga 894
||||||||||| ||||| |||||||||||||| ||||| || |||||||||||||||||
Sbjct: 2960 ccaatgacccagaactgttcatttctccaccagtcctcgataccaacaccactccatcgg 2901
Query: 895 agctccaaaataccagtggcgaagatagaagcaaaaagcaggatgaagaacgccccagca 954
||||||| ||||||||| ||||| || || || |||||||| || |||||| |||||||
Sbjct: 2900 agctccagaataccagttgcgaaaatggaggcgaaaagcagaataaagaacatcccagca 2841
Query: 955 taattgctaatcgcaggaataataaatttgttggtgagtaaacagatagcaggaaggacg 1014
|||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||| ||
Sbjct: 2840 taattgctaatctcaggaatgataaatttgttggtgaggagacagatagcaggaagcaca 2781
Query: 1015 cagtatgctactagtgggatagatgtaattggataaacaatggtgttgatgtatgccagt 1074
|| || || | ||||| || |||||||||||||||||||||||||| ||||| |||||
Sbjct: 2780 caataggcgataagtggaatggatgtaattggataaacaatggtgttaatgtaagccagc 2721
Query: 1075 ctctccagaagctttagccttccattgtaaccataccagataggacagtgtctgctaagt 1134
||||||||||| || | | |||||||||||||||||||||||||| |||||||||||
Sbjct: 2720 ctctccagaagtttcaaacgcccattgtaaccataccagataggacaatgtctgctaagc 2661
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||| ||||| || ||||||||||| |||| ||||||||| ||||||||||| |||||
Sbjct: 2660 agaatctcaacagacccaagagcccaacgtagcacttggttaagacgatcagacagattg 2601
Query: 1195 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaacct 1254
||||| ||||||||||||||||| ||||| |||||||||| ||||| ||||||||||||
Sbjct: 2600 attggcgcagaacccttgaagcatggccgtggtggcatgcaatagattgatatccaacct 2541
Query: 1255 cttgcatgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccg 1314
||||| ||||| || || ||||| | |||||| |||||||| || ||||| ||||| ||
Sbjct: 2540 cttgcgtgcattttaaatccagtcagaatatcctcagtaactgaaccatagatccagcca 2481
Query: 1315 atctctttcccccattctgttttatcctcatatnnccacnaaactaatgnacatgtatag 1374
|||||||| |||||||| ||||| ||||||||| |||| |||| || ||||| || |
Sbjct: 2480 atctcttttccccattcagttttgtcctcatat--ccac--aactgat-aacatggatgg 2426
Query: 1375 cttcctttagcagggaacctgggtttgttgaagggggtatgccaccttgagtcataaaan 1434
||||||| || || || ||||||| ||||| || |||||||| ||||||||||| ||
Sbjct: 2425 cttccttcagtagagatgctgggttcgttgagggtggtatgcctccttgagtcatgaa-- 2368
Query: 1435 naanggggtggatgcaataaaaattggagactggccaaagcgtttctccaagctcttctg 1494
|||||| |||||||||||||| || || ||||| |||||||| || ||||||||
Sbjct: 2367 ------ggtggacgcaataaaaattggcgattgaccaaaacgtttctctaatctcttctg 2314
Query: 1495 agacataagcagtgacctttcatcctcgtaaccttcaaatccctcttctatatcttccat 1554
||||| |||| |||||||||||| || |||||||||| ||||||||||||||||||||
Sbjct: 2313 ggacatcagcactgacctttcatcttcataaccttcaatgccctcttctatatcttccat 2254
Query: 1555 gttgaagatgggagccgaagattctgttctcttcatatcacggtttttggaatcaatata 1614
||| ||||| ||||| ||||| |||||||||||||| |||||||||| ||| || ||
Sbjct: 2253 gttaaagataggagctgaagactctgttctcttcatcatacggtttttgctatccatgta 2194
Query: 1615 gctcttgtccttcttttttcttccgccacagcaacttttaatgataatgttaggctccaa 1674
||||||| ||| || ||||| || |||||||| || |||| | ||||||||| |||||
Sbjct: 2193 gctcttgctctttttctttctgccaccacagcagctcttaacaacaatgttaggttccaa 2134
Query: 1675 atcagcttctgtcaatacaggatcatagccatacaaggcctgcctattgaaacagcatcc 1734
|||||| || || | |||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 2133 atcagcctcagttagtacaggatcatagccatacaaggcctgcctattgaagcagcaacc 2074
Query: 1735 tgttcccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaa 1794
||||||||||||||| || || ||||||||||||| ||| ||||| ||||||||||||||
Sbjct: 2073 tgttcccacataaactggaccctgaatgccatctaaacctttcatgttaatatcaaagaa 2014
Query: 1795 gacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaa 1854
||| ||||| || || || |||||||| |||||||| || ||||||||||||||||| ||
Sbjct: 2013 gactatgttgcgattagcgtatcgatcgtgcaagtcaatgccatcaaatctttgtgggaa 1954
Query: 1855 ctgaacatagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctct 1914
||||||||| |||||||||||||||||||| |||||||||||||| ||||| || |||||
Sbjct: 1953 ctgaacataacaagttttccttcctagtgcgggatccatcatgaagcacattgcttctct 1894
Query: 1915 aagagctttgctgctattgaagtagtgatcacaatccacattaagaagataagcaccatt 1974
|||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 1893 aagagctttgctactgttgaagtagtgatcacaatccacattgagaagataggcaccatt 1834
Query: 1975 cgtcaggacagctgatacgcgaatcaaagcattcatggcaccagccttcttgtggtgctg 2034
||||| ||||| ||||| |||||||| |||||||| ||||||||||||||||| |||||
Sbjct: 1833 tgtcagcacagcagatacacgaatcaatgcattcattgcaccagccttcttgtgatgctg 1774
Query: 2035 gaagcctggcctcttttcacgagaaacataaacaagccgtggcaactcattcccatccgt 2094
||| |||||||||||||||||||| || || ||||||||||||||||| || ||||| ||
Sbjct: 1773 gaatcctggcctcttttcacgagagacgtagacaagccgtggcaactcgttaccatcagt 1714
Query: 2095 gtcaagcccaccactgtggcccaagaatacttggatcattccnggatgatctctagggtt 2154
|||||||||||||||||| |||||||| || || ||||| || || ||||| || |||||
Sbjct: 1713 gtcaagcccaccactgtgccccaagaacacctgaatcatgccagggtgatcccttgggtt 1654
Query: 2155 attcccaggccanggagtgccatcagccatggtccagccctcctcaggtattttttgcgc 2214
|||||||||||| | ||||||||||||||||||||| ||||| ||||||| |||||| ||
Sbjct: 1653 attcccaggccaagcagtgccatcagccatggtccacccctcttcaggtactttttgtgc 1594
Query: 2215 ttttgcaacaagggcatcgatccgtactttgaactcttcatactccctcttcatagcccg 2274
|| |||||||| |||| ||||||||| ||||| ||||||||||| |||||||| |||||
Sbjct: 1593 cttcgcaacaagagcattgatccgtaccttgaattcttcatactctctcttcattgcccg 1534
Query: 2275 cctttctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcgagcaaa 2334
||||||||| ||||| |||||||| ||||||||||| ||||||||||| ||| |||||||
Sbjct: 1533 cctttctttaacaaaggaaggttggattttgtccttcaggtaatctattttttgagcaaa 1474
Query: 2335 gtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccatttcct 2394
||||||||||||||| | |||||||| ||||| ||||||||||| |||||||| |||||
Sbjct: 1473 gtaaaactctggagctcgtggttcaatattgtgcttcttgcaaaacggaacccacttcct 1414
Query: 2395 tgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcaga 2454
||||| ||||| ||||| || ||||| |||||||| |||||||||||||| || |||||
Sbjct: 1413 agcaaattctgcagtttctgacagagcctcaaaagttaacatagctgaaccatcgtcaga 1354
Query: 2455 aacataacatgatactttgtcaacagggtaatccacagcaagaatggacaggacagtgtt 2514
||| || ||||| |||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 1353 aacctagcatgacactttgtcaacagggtaatccacagccagaatggacaaaacagtgtt 1294
Query: 2515 gccagtaattagaggaggttccttaagtggatccactgtactaacaaagacatcgattgg 2574
| || || |||||||||||||| ||||||||||| ||||| ||||||||||| || ||
Sbjct: 1293 tgctgtgatcagaggaggttcctttagtggatccaccgtactgacaaagacatcaatggg 1234
Query: 2575 agccaactgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaagt 2634
||| | ||| |||||||| |||||||||||||||||||||||||| || || ||||| ||
Sbjct: 1233 agcaagctgtgatggctctccctccctatcatatctcaatgcaagcctgtcaaggtatgt 1174
Query: 2635 ttcacggttgataggataccactttgggaactgatctagaagccaagacaaagcaaacca 2694
||||||||| || || |||||||||||||| |||||||| ||||| || || ||||||||
Sbjct: 1173 ttcacggtttatcgggtaccactttgggaattgatctaggagccaggataaggcaaacca 1114
Query: 2695 aacttcacaaataacagatacaagccacaacccataagcatcttccactggatgagttat 2754
|| |||||| ||||||||||| |||||||| ||||||||||| |||||||||||| |
Sbjct: 1113 aatttcacagataacagatactagccacaatccataagcatcccgcactggatgagtgac 1054
Query: 2755 acgatattgaaagaagaaacat-aggatgataagccggagaacaatcacgatccgataaa 2813
||||||||| |||||| ||||| ||||||||||| ||||||| || || ||||| ||||
Sbjct: 1053 acgatattggaagaag-aacatcaggatgataagacggagaatgataacaatccggtaaa 995
Query: 2814 ggttaagctcgtttggagatatcggcactatgcgacttagagg 2856
|||| |||| ||||| || || ||||||||||| || |||||
Sbjct: 994 ggttgagctggtttgaagggataggcactatgcggctcagagg 952
>gb|AF030052.1|AF030052 Oryza sativa subsp. japonica RSW1-like cellulose synthase catalytic
subunit mRNA, partial cds
Length = 1838
Score = 940 bits (474), Expect = 0.0
Identities = 858/984 (87%), Gaps = 2/984 (0%)
Strand = Plus / Minus
Query: 1874 cttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgctattg 1933
||||||||||| |||||||||||||| ||||| || ||||||||||||||||| | |||
Sbjct: 1837 cttcctagtgcgggatccatcatgaagcacattgcttctctaagagctttgctattgttg 1778
Query: 1934 aagtagtgatcacaatccacattaagaagataagcaccattcgtcaggacagctgatacg 1993
||||| ||||||||||||||||| |||||||| |||||||| ||||| ||||| |||||
Sbjct: 1777 aagtaatgatcacaatccacattgagaagataggcaccatttgtcagcacagcagataca 1718
Query: 1994 cgaatcaaagcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttca 2053
|||||||| |||||||| ||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 1717 cgaatcaatgcattcattgcaccagccttcttgtgatgctggaatcctggcctcttttca 1658
Query: 2054 cgagaaacataaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtgg 2113
||||| || || ||||||||||||||||| || ||||| ||||||||||||||||||||
Sbjct: 1657 cgagagacgtagacaagccgtggcaactcgttaccatcagtgtcaagcccaccactgtgc 1598
Query: 2114 cccaagaatacttggatcattccnggatgatctctagggttattcccaggccanggagtg 2173
|||||||| || || ||||| || || ||||| || ||||||||||||||||| | ||||
Sbjct: 1597 cccaagaacacctgaatcatgccagggtgatcccttgggttattcccaggccaagcagtg 1538
Query: 2174 ccatcagccatggtccagccctcctcaggtattttttgcgcttttgcaacaagggcatcg 2233
||||||||||||||||| ||||| ||||||| |||||| || || |||||||| |||| |
Sbjct: 1537 ccatcagccatggtccacccctcttcaggtactttttgtgccttcgcaacaagagcattg 1478
Query: 2234 atccgtactttgaactcttcatactccctcttcatagcccgcctttctttcacaaaagaa 2293
|||||||| ||||| ||||||||||| |||||||| |||||||||||||| ||||| |||
Sbjct: 1477 atccgtaccttgaattcttcatactctctcttcattgcccgcctttctttaacaaaggaa 1418
Query: 2294 ggttgtattttgtcctttaggtaatctatctttcgagcaaagtaaaactctggagcccta 2353
||||| ||||||||||| ||||||||||| ||| |||||||||||||||||||||| |
Sbjct: 1417 ggttggattttgtccttcaggtaatctattttttgagcaaagtaaaactctggagctcgt 1358
Query: 2354 ggttcaatgttgtgtttcttgcaaaagggaacccatttccttgcaaactctgcggtttca 2413
|||||||| ||||| ||||||||||| |||||||| ||||| ||||| ||||| |||||
Sbjct: 1357 ggttcaatattgtgcttcttgcaaaacggaacccacttcctagcaaattctgcagtttct 1298
Query: 2414 gatagagcttcaaaagtcaacatagctgaaccgtcatcagaaacataacatgatactttg 2473
|| ||||| |||||||| |||||||||||||| || ||||||||||| ||||| ||||||
Sbjct: 1297 gacagagcctcaaaagttaacatagctgaaccatcgtcagaaacatagcatgacactttg 1238
Query: 2474 tcaacagggtaatccacagcaagaatggacaggacagtgttgccagtaattagaggaggt 2533
|||||||||||||||||||| |||||||||| |||||||| | || || |||||||||
Sbjct: 1237 tcaacagggtaatccacagccagaatggacaaaacagtgtttgctgtgatcagaggaggt 1178
Query: 2534 tccttaagtggatccactgtactaacaaagacatcgattggagccaactgggatggctca 2593
||||| ||||||||||| ||||| ||||||||||| || ||||| | ||| ||||||||
Sbjct: 1177 tcctttagtggatccaccgtactgacaaagacatcaatgggagcaagctgtgatggctct 1118
Query: 2594 ccctccctatcatatctcaatgcaagtctatcgaggtaagtttcacggttgataggatac 2653
|||||||||||||||||||||||||| || || ||||| ||||||||||| || || |||
Sbjct: 1117 ccctccctatcatatctcaatgcaagcctgtcaaggtatgtttcacggtttatcgggtac 1058
Query: 2654 cactttgggaactgatctagaagccaagacaaagcaaaccaaacttcacaaataacagat 2713
||||||||||| |||||||| ||||| || || |||||||||| |||||| |||||||||
Sbjct: 1057 cactttgggaattgatctaggagccaggataaggcaaaccaaatttcacagataacagat 998
Query: 2714 acaagccacaacccataagcatcttccactggatgagttatacgatattgaaagaagaaa 2773
|| |||||||| ||||||||||| |||||||||||| | ||||||||| |||||| ||
Sbjct: 997 actagccacaatccataagcatcccgcactggatgagtgacacgatattggaagaag-aa 939
Query: 2774 cat-aggatgataagccggagaacaatcacgatccgataaaggttaagctcgtttggaga 2832
||| ||||||||||| ||||||| || || ||||| |||||||| |||| ||||| ||
Sbjct: 938 catcaggatgataagacggagaatgataacaatccggtaaaggttgagctggtttgaagg 879
Query: 2833 tatcggcactatgcgacttagagg 2856
|| ||||||||||| || |||||
Sbjct: 878 gataggcactatgcggctcagagg 855
>dbj|AK060838.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D02, full
insert sequence
Length = 1426
Score = 692 bits (349), Expect = 0.0
Identities = 888/1068 (83%), Gaps = 13/1068 (1%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| ||||| || ||||| || |||||||| |||||||| || ||||| || || ||
Sbjct: 1057 ttctgagtaggcgaaatgaaaggatcgatcttgacccacagaagggagaagatcgacgcg 998
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| ||||| || |||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 997 aggaggatcgaccagacgatgacgatggtcggagtgcggttctgcctgcccatgagaccc 938
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|| ||||| |||||||| |||||||||||||||| | ||||| ||||| || || ||
Sbjct: 937 ttgaggaaggggtagagacggaggatcacccagatggagaagaagagctttccaaagaga 878
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
||||||||||||||||| || ||||| || ||||| || | || ||||| || || |||
Sbjct: 877 ggaccccatgattggtaaccgctgttaatggcatatgatatacccgccaccatgcccacc 818
Query: 655 aggttaatcacaagcacagtggtnnnnnnnatcagaagagttgtccacttgaacacatac 714
||||| || |||||||| ||||| || || ||| | |||||||||||||| ||
Sbjct: 817 aggttgatgacaagcacggtggtcgggggaatgaggagactggtccacttgaacacgtat 758
Query: 715 agctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcg 774
||||||||||| |||||||| ||||||| |||||||| || || |||||||| || ||
Sbjct: 757 agctcagcaaagtcaccatcctcatcggacgcctttgaggtaacagtgaagttggtatca 698
Query: 775 atccctgctagcacttttaagagaccttggaacacagcaaagagatgtgcagaggtgcca 834
|| ||||||| |||||| | ||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 697 attcctgctaacactttcagaagaccctggaacacagcgaagagatgggcagatgtgcca 638
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcga 894
||||||||||| ||||| |||||||||||||| ||||| || |||||||||||||||||
Sbjct: 637 ccaatgacccagaactgttcatttctccaccagtcctcgataccaacaccactccatcgg 578
Query: 895 agctccaaaataccagtggcgaagatagaagcaaaaagcaggatgaagaacgccccagca 954
||||||| ||||||||| ||||| || || || |||||||| || |||||| |||||||
Sbjct: 577 agctccagaataccagttgcgaaaatggaggcgaaaagcagaataaagaacatcccagca 518
Query: 955 taattgctaatcgcaggaataataaatttgttggtgagtaaacagatagcaggaaggacg 1014
|||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||| ||
Sbjct: 517 taattgctaatctcaggaatgataaatttgttggtgaggagacagatagcaggaagcaca 458
Query: 1015 cagtatgctactagtgggatagatgtaattggataaacaatggtgttgatgtatgccagt 1074
|| || || | ||||| || |||||||||||||||||||||||||| ||||| |||||
Sbjct: 457 caataggcgataagtggaatggatgtaattggataaacaatggtgttaatgtaagccagc 398
Query: 1075 ctctccagaagctttagccttccattgtaaccataccagataggacagtgtctgctaagt 1134
||||||||||| || | | |||||||||||||||||||||||||| |||||||||||
Sbjct: 397 ctctccagaagtttcaaacgcccattgtaaccataccagataggacaatgtctgctaagc 338
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||| ||||| || ||||||||||| |||| ||||||||| ||||||||||| |||||
Sbjct: 337 agaatctcaacagacccaagagcccaacgtagcacttggttaagacgatcagacagattg 278
Query: 1195 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaacct 1254
||||| ||||||||||||||||| ||||| |||||||||| ||||| ||||||||||||
Sbjct: 277 attggcgcagaacccttgaagcatggccgtggtggcatgcaatagattgatatccaacct 218
Query: 1255 cttgcatgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccg 1314
||||| ||||| || || ||||| | |||||| |||||||| || ||||| ||||| ||
Sbjct: 217 cttgcgtgcattttaaatccagtcagaatatcctcagtaactgaaccatagatccagcca 158
Query: 1315 atctctttcccccattctgttttatcctcatatnnccacnaaactaatgnacatgtatag 1374
|||||||| |||||||| ||||| ||||||||| |||| |||| || ||||| || |
Sbjct: 157 atctcttttccccattcagttttgtcctcatat--ccac--aactgat-aacatggatgg 103
Query: 1375 cttcctttagcagggaacctgggtttgttgaagggggtatgccaccttgagtcataaaan 1434
||||||| || || || ||||||| ||||| || |||||||| ||||||||||| ||
Sbjct: 102 cttccttcagtagagatgctgggttcgttgagggtggtatgcctccttgagtcatgaa-- 45
Query: 1435 naanggggtggatgcaataaaaattggagactggccaaagcgtttctc 1482
|||||| |||||||||||||| || || ||||| ||||||||
Sbjct: 44 ------ggtggacgcaataaaaattggcgattgaccaaaacgtttctc 3
>gb|D41986.1|D41986 RICS5041A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 482
Score = 486 bits (245), Expect = e-134
Identities = 421/481 (87%), Gaps = 1/481 (0%)
Strand = Plus / Minus
Query: 1824 gcaagtctataccatcaaatctttgtggaaactgaacatagcaagttttccttcctagtg 1883
||||||| || | ||||||||||||||||| |||| |||| ||||||||||||||||||
Sbjct: 480 gcaagtcaatgcnatcaaatctttgtggaa-ctgancataaaaagttttccttcctagtg 422
Query: 1884 ctggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgat 1943
| |||||||||||||| |||| || |||||||||||||||| || ||||||||||||
Sbjct: 421 cgggatccatcatgaagnacattgctcctctaagagctttgctactgntgaagtagtgat 362
Query: 1944 cacaatccacattaagaagataagcaccattcgtcaggacagctgatacgcgaatcaaag 2003
||||||||||||| |||||||| |||||||| ||||| ||||| ||||| |||||||| |
Sbjct: 361 cacaatccacattgagaagataggcaccatttgtcagcacagcagatacacgaatcaatg 302
Query: 2004 cattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacat 2063
||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| || |
Sbjct: 301 cattcattgcaccagccttcttgtgatgctggaatcctggcctcttttcacgagagacgt 242
Query: 2064 aaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaata 2123
| ||||||||||||||||| || ||||| |||||||||||||||||||| |||||||| |
Sbjct: 241 agacaagccgtggcaactcgttaccatcagtgtcaagcccaccactgtgccccaagaaca 182
Query: 2124 cttggatcattccnggatgatctctagggttattcccaggccanggagtgccatcagcca 2183
| || ||||| || || ||||| || || |||||||||||||| | ||||||||||||||
Sbjct: 181 cctgaatcatgccagggtgatcccttggnttattcccaggccaagcagtgccatcagcca 122
Query: 2184 tggtccagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactt 2243
||||||| ||||| ||||||| |||||| || || |||| ||| |||| ||||||||| |
Sbjct: 121 tggtccacccctcttcaggtactttttgtgccttcgcaanaagagcattgatccgtacct 62
Query: 2244 tgaactcttcatactccctcttcatagcccgcctttctttcacaaaagaaggttgtattt 2303
|||| ||||||||||| |||||||| |||||||||||||| ||||| |||||||| ||||
Sbjct: 61 tgaattcttcatactctctcttcattgcccgcctttctttaacaaaggaaggttggattt 2
Query: 2304 t 2304
|
Sbjct: 1 t 1
>gb|CF323300.1|CF323300 HDN--03-H17.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--03-H17, mRNA sequence
Length = 616
Score = 418 bits (211), Expect = e-114
Identities = 521/621 (83%), Gaps = 14/621 (2%)
Strand = Plus / Minus
Query: 896 gctccaaaataccagtggcgaagatagaagcaaaaagcaggatgaagaacg-ccccagca 954
|||||| ||||||||| ||||| || || || |||||||| || |||||| ||||||||
Sbjct: 616 gctccagaataccagttgcgaaaatggaggcgaaaagcagaataaagaacatccccagca 557
Query: 955 taattgctaatcgcaggaataataaatttgttggtgagtaaacagatagcaggaaggacg 1014
|||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||| ||
Sbjct: 556 taattgctaatctcaggaatgataaatttgttggtgaggagacagatagcaggaagcaca 497
Query: 1015 cagtatgctactagtgggatagatgtaattggataaacaatggtgttgatgtatgccagt 1074
|| || || | ||||| || |||||||||||||||||||||||||| ||||| |||||
Sbjct: 496 caataggcgataagtggaatggatgtaattggataaacaatggtgttaatgtaagccagc 437
Query: 1075 ctctccagaagctttagccttccattgtaaccataccagataggacagtgtctgctaagt 1134
||||||||||| || | | |||||||||||||||||||||||||| |||||||||||
Sbjct: 436 ctctccagaagtttcaaacgcccattgtaaccataccagataggacaatgtctgctaagc 377
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||| ||||| || ||||||||||| |||| ||||||||| ||||||||||| |||||
Sbjct: 376 agaatctcaacagacccaagagcccaacgtagcacttggttaagacgatcagacagattg 317
Query: 1195 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaacct 1254
||||| ||||||||||||||||| ||||| |||||||||| ||||| ||||||||||||
Sbjct: 316 attggcgcagaacccttgaagcatggccgtggtggcatgcaatagattgatatccaacct 257
Query: 1255 cttgcatgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccg 1314
||||| ||||| || || ||||| | |||||| |||||||| || ||||| ||||| ||
Sbjct: 256 cttgcgtgcattttaaatccagtcagaatatcctcagtaactgaaccatagatccagcca 197
Query: 1315 atctctttcccccattctgttttatcctcatatnnccacnaaactaatgnacatgtatag 1374
|||||||| |||||||| ||||| ||||||||| |||| |||| || ||||| || |
Sbjct: 196 atctcttttccccattcagttttgtcctcatat--ccac--aactgat-aacatggatgg 142
Query: 1375 cttcctttagcagggaacctgggtttgttgaagggggtatgccaccttgagtcataaaan 1434
||||||| || || || ||||||| ||||| || |||||||| ||||||||||| ||
Sbjct: 141 cttccttcagtagagatgctgggttcgttgagggtggtatgcctccttgagtcatgaa-- 84
Query: 1435 naanggggtggatgcaataaaaattggagactggccaaagcgtttctccaagctcttctg 1494
|||||| |||||||||||||| || || ||||| |||||||| || ||||||||
Sbjct: 83 ------ggtggacgcaataaaaattggcgattgaccaaaacgtttctctaatctcttctg 30
Query: 1495 agacataagcagtgacctttc 1515
||||| |||| |||||||||
Sbjct: 29 ggacatcagcactgacctttc 9
>dbj|AK060079.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-C08, full
insert sequence
Length = 1097
Score = 418 bits (211), Expect = e-114
Identities = 498/596 (83%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| ||||| || ||||| || |||||||| |||||||| || ||||| || || ||
Sbjct: 631 ttctgagtaggcgaaatgaaaggatcgatcttgacccacagaagggagaagatcgacgcg 572
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| ||||| || |||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 571 aggaggatcgaccagacgatgacgatggtcggagtgcggttctgcctgcccatgagaccc 512
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|| ||||| |||||||| ||||||||||||||||| | ||||| ||||| || || ||
Sbjct: 511 ttgaggaaggggtagagatggaggatcacccagatggagaagaagagctttccaaagaga 452
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
||||||||||||||||| || ||||| || ||||| || | || ||||| || || |||
Sbjct: 451 ggaccccatgattggtaaccgctgttaatggcatatgatatacccgccaccatgcccacc 392
Query: 655 aggttaatcacaagcacagtggtnnnnnnnatcagaagagttgtccacttgaacacatac 714
||||| || |||||||| ||||| || || ||| | |||||||||||||| ||
Sbjct: 391 aggttgatgacaagcacggtggtcgggggaatgaggagactggtccacttgaacacgtat 332
Query: 715 agctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcg 774
||||||||||| |||||||| ||||||| |||||||| || || |||||||| || ||
Sbjct: 331 agctcagcaaagtcaccatcctcatcggacgcctttgaggtaacagtgaagttggtatca 272
Query: 775 atccctgctagcacttttaagagaccttggaacacagcaaagagatgtgcagaggtgcca 834
|| ||||||| |||||| | ||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 271 attcctgctaacactttcagaagaccctggaacacagcgaagagatgggcagatgtgcca 212
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcga 894
||||||||||| ||||| |||||||||||||| ||||| || |||||||||||||||||
Sbjct: 211 ccaatgacccagaactgttcatttctccaccagtcctcgataccaacaccactccatcgg 152
Query: 895 agctccaaaataccagtggcgaagatagaagcaaaaagcaggatgaagaacgccccagca 954
||||||| ||||||||| ||||| || || || |||||||| || |||||| |||||||
Sbjct: 151 agctccagaataccagttgcgaaaatggaggcgaaaagcagaataaagaacatcccagca 92
Query: 955 taattgctaatcgcaggaataataaatttgttggtgagtaaacagatagcaggaag 1010
|||||||||||| ||||||| ||||||||||||||||| | |||||||||||||||
Sbjct: 91 taattgctaatctcaggaatgataaatttgttggtgaggagacagatagcaggaag 36
>dbj|AK067850.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123A09, full
insert sequence
Length = 1444
Score = 414 bits (209), Expect = e-112
Identities = 421/489 (86%), Gaps = 2/489 (0%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||||||||| |||||||| ||||| ||||| ||||| ||||| || ||||| ||||||
Sbjct: 1442 ttcttgcaaaacggaacccacttcctagcaaattctgcagtttctgacagagcctcaaaa 1383
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|| |||||||||||||| || ||||||||||| ||||| |||||||||||||||||||||
Sbjct: 1382 gttaacatagctgaaccatcgtcagaaacatagcatgacactttgtcaacagggtaatcc 1323
Query: 2489 acagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcc 2548
||||| |||||||||| |||||||| | || || |||||||||||||| |||||||||
Sbjct: 1322 acagccagaatggacaaaacagtgtttgctgtgatcagaggaggttcctttagtggatcc 1263
Query: 2549 actgtactaacaaagacatcgattggagccaactgggatggctcaccctccctatcatat 2608
|| ||||| ||||||||||| || ||||| | ||| |||||||| |||||||||||||||
Sbjct: 1262 accgtactgacaaagacatcaatgggagcaagctgtgatggctctccctccctatcatat 1203
Query: 2609 ctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttgggaactga 2668
||||||||||| || || ||||| ||||||||||| || || |||||||||||||| |||
Sbjct: 1202 ctcaatgcaagcctgtcaaggtatgtttcacggtttatcgggtaccactttgggaattga 1143
Query: 2669 tctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagccacaaccca 2728
||||| ||||| || || |||||||||| |||||| ||||||||||| |||||||| |||
Sbjct: 1142 tctaggagccaggataaggcaaaccaaatttcacagataacagatactagccacaatcca 1083
Query: 2729 taagcatcttccactggatgagttatacgatattgaaagaagaaacat-aggatgataag 2787
|||||||| |||||||||||| | ||||||||| |||||| ||||| |||||||||||
Sbjct: 1082 taagcatcccgcactggatgagtgacacgatattggaagaag-aacatcaggatgataag 1024
Query: 2788 ccggagaacaatcacgatccgataaaggttaagctcgtttggagatatcggcactatgcg 2847
||||||| || || ||||| |||||||| |||| ||||| || || |||||||||||
Sbjct: 1023 acggagaatgataacaatccggtaaaggttgagctggtttgaagggataggcactatgcg 964
Query: 2848 acttagagg 2856
|| |||||
Sbjct: 963 gctcagagg 955
>gb|AC132494.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0681F01, ***
SEQUENCING IN PROGRESS ***, 4 ordered pieces
Length = 50149
Score = 363 bits (183), Expect = 4e-097
Identities = 458/552 (82%)
Strand = Plus / Plus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| ||||| || ||||| || |||||||| |||||||| || ||||| || || ||
Sbjct: 10091 ttctgagtaggcgaaatgaaaggatcgatcttgacccacagaagggagaagatcgacgcg 10150
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| ||||| || |||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 10151 aggaggatcgaccagacgatgacgatggtcggagtgcggttctgcctgcccatgagaccc 10210
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|| ||||| |||||||| ||||||||||||||||| | ||||| ||||| || || ||
Sbjct: 10211 ttgaggaaggggtagagatggaggatcacccagatggagaagaagagctttccaaagaga 10270
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
||||||||||||||||| || ||||| || ||||| || | || ||||| || || |||
Sbjct: 10271 ggaccccatgattggtaaccgctgttaatggcatatgatatacccgccaccatgcccacc 10330
Query: 655 aggttaatcacaagcacagtggtnnnnnnnatcagaagagttgtccacttgaacacatac 714
||||| || |||||||| ||||| || || ||| | |||||||||||||| ||
Sbjct: 10331 aggttgatgacaagcacggtggtcgggggaatgaggagactggtccacttgaacacgtat 10390
Query: 715 agctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcg 774
||||||||||| |||||||| ||||||| |||||||| || || |||||||| || ||
Sbjct: 10391 agctcagcaaagtcaccatcctcatcggacgcctttgaggtaacagtgaagttggtatca 10450
Query: 775 atccctgctagcacttttaagagaccttggaacacagcaaagagatgtgcagaggtgcca 834
|| ||||||| |||||| | ||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 10451 attcctgctaacactttcagaagaccctggaacacagcgaagagatgggcagatgtgcca 10510
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcga 894
||||||||||| ||||| |||||||||||||| ||||| || |||||||||||||||||
Sbjct: 10511 ccaatgacccagaactgttcatttctccaccagtcctcgataccaacaccactccatcgg 10570
Query: 895 agctccaaaataccagtggcgaagatagaagcaaaaagcaggatgaagaacgccccagca 954
||||||| ||||||||| ||||| || || || |||||||| || |||||| |||||||
Sbjct: 10571 agctccagaataccagttgcgaaaatggaggcgaaaagcagaataaagaacatcccagca 10630
Query: 955 taattgctaatc 966
||||||||||||
Sbjct: 10631 taattgctaatc 10642
Score = 357 bits (180), Expect = 2e-095
Identities = 306/348 (87%)
Strand = Plus / Plus
Query: 2263 cttcatagcccgcctttctttcacaaaagaaggttgtattttgtcctttaggtaatctat 2322
|||||| |||||||||||||| ||||| |||||||| ||||||||||| |||||||||||
Sbjct: 13585 cttcattgcccgcctttctttaacaaaggaaggttggattttgtccttcaggtaatctat 13644
Query: 2323 ctttcgagcaaagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaaggg 2382
||| |||||||||||||||||||||| | |||||||| ||||| ||||||||||| ||
Sbjct: 13645 tttttgagcaaagtaaaactctggagctcgtggttcaatattgtgcttcttgcaaaacgg 13704
Query: 2383 aacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctga 2442
|||||| ||||| ||||| ||||| ||||| || ||||| |||||||| |||||||||||
Sbjct: 13705 aacccacttcctagcaaattctgcagtttctgacagagcctcaaaagttaacatagctga 13764
Query: 2443 accgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatgga 2502
||| || ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 13765 accatcgtcagaaacatagcatgacactttgtcaacagggtaatccacagccagaatgga 13824
Query: 2503 caggacagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaa 2562
|| |||||||| | || || |||||||||||||| ||||||||||| ||||| |||||
Sbjct: 13825 caaaacagtgtttgctgtgatcagaggaggttcctttagtggatccaccgtactgacaaa 13884
Query: 2563 gacatcgattggagccaactgggatggctcaccctccctatcatatct 2610
|||||| || ||||| | ||| |||||||| |||||||||||||||||
Sbjct: 13885 gacatcaatgggagcaagctgtgatggctctccctccctatcatatct 13932
Score = 307 bits (155), Expect = 2e-080
Identities = 296/343 (86%)
Strand = Plus / Plus
Query: 968 caggaataataaatttgttggtgagtaaacagatagcaggaaggacgcagtatgctacta 1027
||||||| ||||||||||||||||| | ||||||||||||||| || || || || | |
Sbjct: 10863 caggaatgataaatttgttggtgaggagacagatagcaggaagcacacaataggcgataa 10922
Query: 1028 gtgggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagct 1087
|||| || |||||||||||||||||||||||||| ||||| ||||| ||||||||||| |
Sbjct: 10923 gtggaatggatgtaattggataaacaatggtgttaatgtaagccagcctctccagaagtt 10982
Query: 1088 ttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactg 1147
| | | |||||||||||||||||||||||||| ||||||||||| ||||| ||||| |
Sbjct: 10983 tcaaacgcccattgtaaccataccagataggacaatgtctgctaagcagaatctcaacag 11042
Query: 1148 aaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaac 1207
| ||||||||||| |||| ||||||||| ||||||||||| ||||| ||||| |||||||
Sbjct: 11043 acccaagagcccaacgtagcacttggttaagacgatcagacagattgattggcgcagaac 11102
Query: 1208 ccttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatct 1267
|||||||||| ||||| |||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 11103 ccttgaagcatggccgtggtggcatgcaatagattgatatccaacctcttgcgtgcattt 11162
Query: 1268 tgaaaccagttaaaatatcttcagtaacagagccatatatcca 1310
| || ||||| | |||||| |||||||| || ||||| |||||
Sbjct: 11163 taaatccagtcagaatatcctcagtaactgaaccatagatcca 11205
Score = 250 bits (126), Expect = 4e-063
Identities = 192/214 (89%)
Strand = Plus / Plus
Query: 1786 atcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatct 1845
|||||||||||| ||||| || || || |||||||| |||||||| || |||||||||||
Sbjct: 12865 atcaaagaagactatgttgcgattagcgtatcgatcgtgcaagtcaatgccatcaaatct 12924
Query: 1846 ttgtggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacat 1905
|||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 12925 ttgtgggaactgaacataacaagttttccttcctagtgcgggatccatcatgaagcacat 12984
Query: 1906 agcctctctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagata 1965
|| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 12985 tgcttctctaagagctttgctactgttgaagtagtgatcacaatccacattgagaagata 13044
Query: 1966 agcaccattcgtcaggacagctgatacgcgaatc 1999
|||||||| ||||| ||||| ||||| ||||||
Sbjct: 13045 ggcaccatttgtcagcacagcagatacacgaatc 13078
Score = 250 bits (126), Expect = 4e-063
Identities = 192/214 (89%)
Strand = Plus / Plus
Query: 1786 atcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatct 1845
|||||||||||| ||||| || || || |||||||| |||||||| || |||||||||||
Sbjct: 12043 atcaaagaagactatgttgcgattagcgtatcgatcgtgcaagtcaatgccatcaaatct 12102
Query: 1846 ttgtggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacat 1905
|||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 12103 ttgtgggaactgaacataacaagttttccttcctagtgcgggatccatcatgaagcacat 12162
Query: 1906 agcctctctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagata 1965
|| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 12163 tgcttctctaagagctttgctactgttgaagtagtgatcacaatccacattgagaagata 12222
Query: 1966 agcaccattcgtcaggacagctgatacgcgaatc 1999
|||||||| ||||| ||||| ||||| ||||||
Sbjct: 12223 ggcaccatttgtcagcacagcagatacacgaatc 12256
Score = 226 bits (114), Expect = 5e-056
Identities = 225/262 (85%)
Strand = Plus / Plus
Query: 1524 aaccttcaaatccctcttctatatcttccatgttgaagatgggagccgaagattctgttc 1583
||||||||| ||||||||||||||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 11708 aaccttcaatgccctcttctatatcttccatgttaaagataggagctgaagactctgttc 11767
Query: 1584 tcttcatatcacggtttttggaatcaatatagctcttgtccttcttttttcttccgccac 1643
||||||| |||||||||| ||| || ||||||||| ||| || ||||| || ||||
Sbjct: 11768 tcttcatcatacggtttttgctatccatgtagctcttgctctttttctttctgccaccac 11827
Query: 1644 agcaacttttaatgataatgttaggctccaaatcagcttctgtcaatacaggatcatagc 1703
|||| || |||| | ||||||||| ||||||||||| || || | ||||||||||||||
Sbjct: 11828 agcagctcttaacaacaatgttaggttccaaatcagcctcagttagtacaggatcatagc 11887
Query: 1704 catacaaggcctgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgc 1763
|||||||||||||||||||||| ||||| ||||||||||||||||| || || |||||||
Sbjct: 11888 catacaaggcctgcctattgaagcagcaacctgttcccacataaactggaccctgaatgc 11947
Query: 1764 catctagacccttcatattaat 1785
|||||| ||| ||||| |||||
Sbjct: 11948 catctaaacctttcatgttaat 11969
Score = 176 bits (89), Expect = 4e-041
Identities = 211/249 (84%), Gaps = 2/249 (0%)
Strand = Plus / Plus
Query: 2609 ctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttgggaactga 2668
||||||||||| || || ||||| ||||||||||| || || |||||||||||||| |||
Sbjct: 14031 ctcaatgcaagcctgtcaaggtatgtttcacggtttatcgggtaccactttgggaattga 14090
Query: 2669 tctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagccacaaccca 2728
||||| ||||| || || |||||||||| |||||| ||||||||||| |||||||| |||
Sbjct: 14091 tctaggagccaggataaggcaaaccaaatttcacagataacagatactagccacaatcca 14150
Query: 2729 taagcatcttccactggatgagttatacgatattgaaagaagaaacat-aggatgataag 2787
|||||||| |||||||||||| | ||||||||| |||||| ||||| |||||||||||
Sbjct: 14151 taagcatcccgcactggatgagtgacacgatattggaagaag-aacatcaggatgataag 14209
Query: 2788 ccggagaacaatcacgatccgataaaggttaagctcgtttggagatatcggcactatgcg 2847
||||||| || || ||||| |||||||| |||| ||||| || || |||||||||||
Sbjct: 14210 acggagaatgataacaatccggtaaaggttgagctggtttgaagggataggcactatgcg 14269
Query: 2848 acttagagg 2856
|| |||||
Sbjct: 14270 gctcagagg 14278
Score = 157 bits (79), Expect = 4e-035
Identities = 109/119 (91%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 13159 gcattcattgcaccagccttcttgtgatgctggaatcctggcctcttttcacgagagacg 13218
Query: 2063 taaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaa 2121
|| ||||||||||||||||| || ||||| |||||||||||||||||||| ||||||||
Sbjct: 13219 tagacaagccgtggcaactcgttaccatcagtgtcaagcccaccactgtgccccaagaa 13277
Score = 157 bits (79), Expect = 4e-035
Identities = 109/119 (91%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 12337 gcattcattgcaccagccttcttgtgatgctggaatcctggcctcttttcacgagagacg 12396
Query: 2063 taaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaa 2121
|| ||||||||||||||||| || ||||| |||||||||||||||||||| ||||||||
Sbjct: 12397 tagacaagccgtggcaactcgttaccatcagtgtcaagcccaccactgtgccccaagaa 12455
Score = 131 bits (66), Expect = 2e-027
Identities = 118/136 (86%)
Strand = Plus / Plus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtc 2188
||||| || || ||||| || ||||||||||||||||| | |||||||||||||||||||
Sbjct: 13372 atcatgccagggtgatcccttgggttattcccaggccaagcagtgccatcagccatggtc 13431
Query: 2189 cagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaac 2248
|| ||||| ||||||| |||||| || || |||||||| |||| ||||||||| |||||
Sbjct: 13432 cacccctcttcaggtactttttgtgccttcgcaacaagagcattgatccgtaccttgaat 13491
Query: 2249 tcttcatactccctct 2264
||||||||||| ||||
Sbjct: 13492 tcttcatactctctct 13507
Score = 79.8 bits (40), Expect = 8e-012
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 1441 ggtggatgcaataaaaattggagactggccaaagcgtttctccaagctcttctgagacat 1500
|||||| |||||||||||||| || || ||||| |||||||| || |||||||| |||||
Sbjct: 11465 ggtggacgcaataaaaattggcgattgaccaaaacgtttctctaatctcttctgggacat 11524
Query: 1501 aagcagtgacctttcatcctcgtaacct 1528
|||| |||||||||||| || ||||||
Sbjct: 11525 cagcactgacctttcatcttcataacct 11552
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
OSJNBa0029B02, complete sequence
Length = 156649
Score = 363 bits (183), Expect = 4e-097
Identities = 458/552 (82%)
Strand = Plus / Plus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| ||||| || ||||| || |||||||| |||||||| || ||||| || || ||
Sbjct: 17171 ttctgagtaggcgaaatgaaaggatcgatcttgacccacagaagggagaagatcgacgcg 17230
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| ||||| || |||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 17231 aggaggatcgaccagacgatgacgatggtcggagtgcggttctgcctgcccatgagaccc 17290
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|| ||||| |||||||| ||||||||||||||||| | ||||| ||||| || || ||
Sbjct: 17291 ttgaggaaggggtagagatggaggatcacccagatggagaagaagagctttccaaagaga 17350
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
||||||||||||||||| || ||||| || ||||| || | || ||||| || || |||
Sbjct: 17351 ggaccccatgattggtaaccgctgttaatggcatatgatatacccgccaccatgcccacc 17410
Query: 655 aggttaatcacaagcacagtggtnnnnnnnatcagaagagttgtccacttgaacacatac 714
||||| || |||||||| ||||| || || ||| | |||||||||||||| ||
Sbjct: 17411 aggttgatgacaagcacggtggtcgggggaatgaggagactggtccacttgaacacgtat 17470
Query: 715 agctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcg 774
||||||||||| |||||||| ||||||| |||||||| || || |||||||| || ||
Sbjct: 17471 agctcagcaaagtcaccatcctcatcggacgcctttgaggtaacagtgaagttggtatca 17530
Query: 775 atccctgctagcacttttaagagaccttggaacacagcaaagagatgtgcagaggtgcca 834
|| ||||||| |||||| | ||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 17531 attcctgctaacactttcagaagaccctggaacacagcgaagagatgggcagatgtgcca 17590
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcga 894
||||||||||| ||||| |||||||||||||| ||||| || |||||||||||||||||
Sbjct: 17591 ccaatgacccagaactgttcatttctccaccagtcctcgataccaacaccactccatcgg 17650
Query: 895 agctccaaaataccagtggcgaagatagaagcaaaaagcaggatgaagaacgccccagca 954
||||||| ||||||||| ||||| || || || |||||||| || |||||| |||||||
Sbjct: 17651 agctccagaataccagttgcgaaaatggaggcgaaaagcagaataaagaacatcccagca 17710
Query: 955 taattgctaatc 966
||||||||||||
Sbjct: 17711 taattgctaatc 17722
Score = 357 bits (180), Expect = 2e-095
Identities = 306/348 (87%)
Strand = Plus / Plus
Query: 2263 cttcatagcccgcctttctttcacaaaagaaggttgtattttgtcctttaggtaatctat 2322
|||||| |||||||||||||| ||||| |||||||| ||||||||||| |||||||||||
Sbjct: 19843 cttcattgcccgcctttctttaacaaaggaaggttggattttgtccttcaggtaatctat 19902
Query: 2323 ctttcgagcaaagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaaggg 2382
||| |||||||||||||||||||||| | |||||||| ||||| ||||||||||| ||
Sbjct: 19903 tttttgagcaaagtaaaactctggagctcgtggttcaatattgtgcttcttgcaaaacgg 19962
Query: 2383 aacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctga 2442
|||||| ||||| ||||| ||||| ||||| || ||||| |||||||| |||||||||||
Sbjct: 19963 aacccacttcctagcaaattctgcagtttctgacagagcctcaaaagttaacatagctga 20022
Query: 2443 accgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatgga 2502
||| || ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 20023 accatcgtcagaaacatagcatgacactttgtcaacagggtaatccacagccagaatgga 20082
Query: 2503 caggacagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaa 2562
|| |||||||| | || || |||||||||||||| ||||||||||| ||||| |||||
Sbjct: 20083 caaaacagtgtttgctgtgatcagaggaggttcctttagtggatccaccgtactgacaaa 20142
Query: 2563 gacatcgattggagccaactgggatggctcaccctccctatcatatct 2610
|||||| || ||||| | ||| |||||||| |||||||||||||||||
Sbjct: 20143 gacatcaatgggagcaagctgtgatggctctccctccctatcatatct 20190
Score = 307 bits (155), Expect = 2e-080
Identities = 296/343 (86%)
Strand = Plus / Plus
Query: 968 caggaataataaatttgttggtgagtaaacagatagcaggaaggacgcagtatgctacta 1027
||||||| ||||||||||||||||| | ||||||||||||||| || || || || | |
Sbjct: 17943 caggaatgataaatttgttggtgaggagacagatagcaggaagcacacaataggcgataa 18002
Query: 1028 gtgggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagct 1087
|||| || |||||||||||||||||||||||||| ||||| ||||| ||||||||||| |
Sbjct: 18003 gtggaatggatgtaattggataaacaatggtgttaatgtaagccagcctctccagaagtt 18062
Query: 1088 ttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactg 1147
| | | |||||||||||||||||||||||||| ||||||||||| ||||| ||||| |
Sbjct: 18063 tcaaacgcccattgtaaccataccagataggacaatgtctgctaagcagaatctcaacag 18122
Query: 1148 aaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaac 1207
| ||||||||||| |||| ||||||||| ||||||||||| ||||| ||||| |||||||
Sbjct: 18123 acccaagagcccaacgtagcacttggttaagacgatcagacagattgattggcgcagaac 18182
Query: 1208 ccttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatct 1267
|||||||||| ||||| |||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 18183 ccttgaagcatggccgtggtggcatgcaatagattgatatccaacctcttgcgtgcattt 18242
Query: 1268 tgaaaccagttaaaatatcttcagtaacagagccatatatcca 1310
| || ||||| | |||||| |||||||| || ||||| |||||
Sbjct: 18243 taaatccagtcagaatatcctcagtaactgaaccatagatcca 18285
Score = 250 bits (126), Expect = 4e-063
Identities = 192/214 (89%)
Strand = Plus / Plus
Query: 1786 atcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatct 1845
|||||||||||| ||||| || || || |||||||| |||||||| || |||||||||||
Sbjct: 19123 atcaaagaagactatgttgcgattagcgtatcgatcgtgcaagtcaatgccatcaaatct 19182
Query: 1846 ttgtggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacat 1905
|||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 19183 ttgtgggaactgaacataacaagttttccttcctagtgcgggatccatcatgaagcacat 19242
Query: 1906 agcctctctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagata 1965
|| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 19243 tgcttctctaagagctttgctactgttgaagtagtgatcacaatccacattgagaagata 19302
Query: 1966 agcaccattcgtcaggacagctgatacgcgaatc 1999
|||||||| ||||| ||||| ||||| ||||||
Sbjct: 19303 ggcaccatttgtcagcacagcagatacacgaatc 19336
Score = 226 bits (114), Expect = 5e-056
Identities = 225/262 (85%)
Strand = Plus / Plus
Query: 1524 aaccttcaaatccctcttctatatcttccatgttgaagatgggagccgaagattctgttc 1583
||||||||| ||||||||||||||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 18788 aaccttcaatgccctcttctatatcttccatgttaaagataggagctgaagactctgttc 18847
Query: 1584 tcttcatatcacggtttttggaatcaatatagctcttgtccttcttttttcttccgccac 1643
||||||| |||||||||| ||| || ||||||||| ||| || ||||| || ||||
Sbjct: 18848 tcttcatcatacggtttttgctatccatgtagctcttgctctttttctttctgccaccac 18907
Query: 1644 agcaacttttaatgataatgttaggctccaaatcagcttctgtcaatacaggatcatagc 1703
|||| || |||| | ||||||||| ||||||||||| || || | ||||||||||||||
Sbjct: 18908 agcagctcttaacaacaatgttaggttccaaatcagcctcagttagtacaggatcatagc 18967
Query: 1704 catacaaggcctgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgc 1763
|||||||||||||||||||||| ||||| ||||||||||||||||| || || |||||||
Sbjct: 18968 catacaaggcctgcctattgaagcagcaacctgttcccacataaactggaccctgaatgc 19027
Query: 1764 catctagacccttcatattaat 1785
|||||| ||| ||||| |||||
Sbjct: 19028 catctaaacctttcatgttaat 19049
Score = 176 bits (89), Expect = 4e-041
Identities = 211/249 (84%), Gaps = 2/249 (0%)
Strand = Plus / Plus
Query: 2609 ctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttgggaactga 2668
||||||||||| || || ||||| ||||||||||| || || |||||||||||||| |||
Sbjct: 20289 ctcaatgcaagcctgtcaaggtatgtttcacggtttatcgggtaccactttgggaattga 20348
Query: 2669 tctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagccacaaccca 2728
||||| ||||| || || |||||||||| |||||| ||||||||||| |||||||| |||
Sbjct: 20349 tctaggagccaggataaggcaaaccaaatttcacagataacagatactagccacaatcca 20408
Query: 2729 taagcatcttccactggatgagttatacgatattgaaagaagaaacat-aggatgataag 2787
|||||||| |||||||||||| | ||||||||| |||||| ||||| |||||||||||
Sbjct: 20409 taagcatcccgcactggatgagtgacacgatattggaagaag-aacatcaggatgataag 20467
Query: 2788 ccggagaacaatcacgatccgataaaggttaagctcgtttggagatatcggcactatgcg 2847
||||||| || || ||||| |||||||| |||| ||||| || || |||||||||||
Sbjct: 20468 acggagaatgataacaatccggtaaaggttgagctggtttgaagggataggcactatgcg 20527
Query: 2848 acttagagg 2856
|| |||||
Sbjct: 20528 gctcagagg 20536
Score = 157 bits (79), Expect = 4e-035
Identities = 109/119 (91%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 19417 gcattcattgcaccagccttcttgtgatgctggaatcctggcctcttttcacgagagacg 19476
Query: 2063 taaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaa 2121
|| ||||||||||||||||| || ||||| |||||||||||||||||||| ||||||||
Sbjct: 19477 tagacaagccgtggcaactcgttaccatcagtgtcaagcccaccactgtgccccaagaa 19535
Score = 131 bits (66), Expect = 2e-027
Identities = 118/136 (86%)
Strand = Plus / Plus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtc 2188
||||| || || ||||| || ||||||||||||||||| | |||||||||||||||||||
Sbjct: 19630 atcatgccagggtgatcccttgggttattcccaggccaagcagtgccatcagccatggtc 19689
Query: 2189 cagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaac 2248
|| ||||| ||||||| |||||| || || |||||||| |||| ||||||||| |||||
Sbjct: 19690 cacccctcttcaggtactttttgtgccttcgcaacaagagcattgatccgtaccttgaat 19749
Query: 2249 tcttcatactccctct 2264
||||||||||| ||||
Sbjct: 19750 tcttcatactctctct 19765
Score = 79.8 bits (40), Expect = 8e-012
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 1441 ggtggatgcaataaaaattggagactggccaaagcgtttctccaagctcttctgagacat 1500
|||||| |||||||||||||| || || ||||| |||||||| || |||||||| |||||
Sbjct: 18545 ggtggacgcaataaaaattggcgattgaccaaaacgtttctctaatctcttctgggacat 18604
Query: 1501 aagcagtgacctttcatcctcgtaacct 1528
|||| |||||||||||| || ||||||
Sbjct: 18605 cagcactgacctttcatcttcataacct 18632
>gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617A08,
complete sequence
Length = 144781
Score = 363 bits (183), Expect = 4e-097
Identities = 458/552 (82%)
Strand = Plus / Plus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| ||||| || ||||| || |||||||| |||||||| || ||||| || || ||
Sbjct: 128328 ttctgagtaggcgaaatgaaaggatcgatcttgacccacagaagggagaagatcgacgcg 128387
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| ||||| || |||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 128388 aggaggatcgaccagacgatgacgatggtcggagtgcggttctgcctgcccatgagaccc 128447
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|| ||||| |||||||| ||||||||||||||||| | ||||| ||||| || || ||
Sbjct: 128448 ttgaggaaggggtagagatggaggatcacccagatggagaagaagagctttccaaagaga 128507
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
||||||||||||||||| || ||||| || ||||| || | || ||||| || || |||
Sbjct: 128508 ggaccccatgattggtaaccgctgttaatggcatatgatatacccgccaccatgcccacc 128567
Query: 655 aggttaatcacaagcacagtggtnnnnnnnatcagaagagttgtccacttgaacacatac 714
||||| || |||||||| ||||| || || ||| | |||||||||||||| ||
Sbjct: 128568 aggttgatgacaagcacggtggtcgggggaatgaggagactggtccacttgaacacgtat 128627
Query: 715 agctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcg 774
||||||||||| |||||||| ||||||| |||||||| || || |||||||| || ||
Sbjct: 128628 agctcagcaaagtcaccatcctcatcggacgcctttgaggtaacagtgaagttggtatca 128687
Query: 775 atccctgctagcacttttaagagaccttggaacacagcaaagagatgtgcagaggtgcca 834
|| ||||||| |||||| | ||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 128688 attcctgctaacactttcagaagaccctggaacacagcgaagagatgggcagatgtgcca 128747
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcga 894
||||||||||| ||||| |||||||||||||| ||||| || |||||||||||||||||
Sbjct: 128748 ccaatgacccagaactgttcatttctccaccagtcctcgataccaacaccactccatcgg 128807
Query: 895 agctccaaaataccagtggcgaagatagaagcaaaaagcaggatgaagaacgccccagca 954
||||||| ||||||||| ||||| || || || |||||||| || |||||| |||||||
Sbjct: 128808 agctccagaataccagttgcgaaaatggaggcgaaaagcagaataaagaacatcccagca 128867
Query: 955 taattgctaatc 966
||||||||||||
Sbjct: 128868 taattgctaatc 128879
Score = 357 bits (180), Expect = 2e-095
Identities = 306/348 (87%)
Strand = Plus / Plus
Query: 2263 cttcatagcccgcctttctttcacaaaagaaggttgtattttgtcctttaggtaatctat 2322
|||||| |||||||||||||| ||||| |||||||| ||||||||||| |||||||||||
Sbjct: 131000 cttcattgcccgcctttctttaacaaaggaaggttggattttgtccttcaggtaatctat 131059
Query: 2323 ctttcgagcaaagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaaggg 2382
||| |||||||||||||||||||||| | |||||||| ||||| ||||||||||| ||
Sbjct: 131060 tttttgagcaaagtaaaactctggagctcgtggttcaatattgtgcttcttgcaaaacgg 131119
Query: 2383 aacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctga 2442
|||||| ||||| ||||| ||||| ||||| || ||||| |||||||| |||||||||||
Sbjct: 131120 aacccacttcctagcaaattctgcagtttctgacagagcctcaaaagttaacatagctga 131179
Query: 2443 accgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatgga 2502
||| || ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 131180 accatcgtcagaaacatagcatgacactttgtcaacagggtaatccacagccagaatgga 131239
Query: 2503 caggacagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaa 2562
|| |||||||| | || || |||||||||||||| ||||||||||| ||||| |||||
Sbjct: 131240 caaaacagtgtttgctgtgatcagaggaggttcctttagtggatccaccgtactgacaaa 131299
Query: 2563 gacatcgattggagccaactgggatggctcaccctccctatcatatct 2610
|||||| || ||||| | ||| |||||||| |||||||||||||||||
Sbjct: 131300 gacatcaatgggagcaagctgtgatggctctccctccctatcatatct 131347
Score = 307 bits (155), Expect = 2e-080
Identities = 296/343 (86%)
Strand = Plus / Plus
Query: 968 caggaataataaatttgttggtgagtaaacagatagcaggaaggacgcagtatgctacta 1027
||||||| ||||||||||||||||| | ||||||||||||||| || || || || | |
Sbjct: 129100 caggaatgataaatttgttggtgaggagacagatagcaggaagcacacaataggcgataa 129159
Query: 1028 gtgggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagct 1087
|||| || |||||||||||||||||||||||||| ||||| ||||| ||||||||||| |
Sbjct: 129160 gtggaatggatgtaattggataaacaatggtgttaatgtaagccagcctctccagaagtt 129219
Query: 1088 ttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactg 1147
| | | |||||||||||||||||||||||||| ||||||||||| ||||| ||||| |
Sbjct: 129220 tcaaacgcccattgtaaccataccagataggacaatgtctgctaagcagaatctcaacag 129279
Query: 1148 aaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaac 1207
| ||||||||||| |||| ||||||||| ||||||||||| ||||| ||||| |||||||
Sbjct: 129280 acccaagagcccaacgtagcacttggttaagacgatcagacagattgattggcgcagaac 129339
Query: 1208 ccttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatct 1267
|||||||||| ||||| |||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 129340 ccttgaagcatggccgtggtggcatgcaatagattgatatccaacctcttgcgtgcattt 129399
Query: 1268 tgaaaccagttaaaatatcttcagtaacagagccatatatcca 1310
| || ||||| | |||||| |||||||| || ||||| |||||
Sbjct: 129400 taaatccagtcagaatatcctcagtaactgaaccatagatcca 129442
Score = 250 bits (126), Expect = 4e-063
Identities = 192/214 (89%)
Strand = Plus / Plus
Query: 1786 atcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatct 1845
|||||||||||| ||||| || || || |||||||| |||||||| || |||||||||||
Sbjct: 130280 atcaaagaagactatgttgcgattagcgtatcgatcgtgcaagtcaatgccatcaaatct 130339
Query: 1846 ttgtggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacat 1905
|||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 130340 ttgtgggaactgaacataacaagttttccttcctagtgcgggatccatcatgaagcacat 130399
Query: 1906 agcctctctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagata 1965
|| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 130400 tgcttctctaagagctttgctactgttgaagtagtgatcacaatccacattgagaagata 130459
Query: 1966 agcaccattcgtcaggacagctgatacgcgaatc 1999
|||||||| ||||| ||||| ||||| ||||||
Sbjct: 130460 ggcaccatttgtcagcacagcagatacacgaatc 130493
Score = 226 bits (114), Expect = 5e-056
Identities = 225/262 (85%)
Strand = Plus / Plus
Query: 1524 aaccttcaaatccctcttctatatcttccatgttgaagatgggagccgaagattctgttc 1583
||||||||| ||||||||||||||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 129945 aaccttcaatgccctcttctatatcttccatgttaaagataggagctgaagactctgttc 130004
Query: 1584 tcttcatatcacggtttttggaatcaatatagctcttgtccttcttttttcttccgccac 1643
||||||| |||||||||| ||| || ||||||||| ||| || ||||| || ||||
Sbjct: 130005 tcttcatcatacggtttttgctatccatgtagctcttgctctttttctttctgccaccac 130064
Query: 1644 agcaacttttaatgataatgttaggctccaaatcagcttctgtcaatacaggatcatagc 1703
|||| || |||| | ||||||||| ||||||||||| || || | ||||||||||||||
Sbjct: 130065 agcagctcttaacaacaatgttaggttccaaatcagcctcagttagtacaggatcatagc 130124
Query: 1704 catacaaggcctgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgc 1763
|||||||||||||||||||||| ||||| ||||||||||||||||| || || |||||||
Sbjct: 130125 catacaaggcctgcctattgaagcagcaacctgttcccacataaactggaccctgaatgc 130184
Query: 1764 catctagacccttcatattaat 1785
|||||| ||| ||||| |||||
Sbjct: 130185 catctaaacctttcatgttaat 130206
Score = 176 bits (89), Expect = 4e-041
Identities = 211/249 (84%), Gaps = 2/249 (0%)
Strand = Plus / Plus
Query: 2609 ctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttgggaactga 2668
||||||||||| || || ||||| ||||||||||| || || |||||||||||||| |||
Sbjct: 131446 ctcaatgcaagcctgtcaaggtatgtttcacggtttatcgggtaccactttgggaattga 131505
Query: 2669 tctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagccacaaccca 2728
||||| ||||| || || |||||||||| |||||| ||||||||||| |||||||| |||
Sbjct: 131506 tctaggagccaggataaggcaaaccaaatttcacagataacagatactagccacaatcca 131565
Query: 2729 taagcatcttccactggatgagttatacgatattgaaagaagaaacat-aggatgataag 2787
|||||||| |||||||||||| | ||||||||| |||||| ||||| |||||||||||
Sbjct: 131566 taagcatcccgcactggatgagtgacacgatattggaagaag-aacatcaggatgataag 131624
Query: 2788 ccggagaacaatcacgatccgataaaggttaagctcgtttggagatatcggcactatgcg 2847
||||||| || || ||||| |||||||| |||| ||||| || || |||||||||||
Sbjct: 131625 acggagaatgataacaatccggtaaaggttgagctggtttgaagggataggcactatgcg 131684
Query: 2848 acttagagg 2856
|| |||||
Sbjct: 131685 gctcagagg 131693
Score = 157 bits (79), Expect = 4e-035
Identities = 109/119 (91%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 130574 gcattcattgcaccagccttcttgtgatgctggaatcctggcctcttttcacgagagacg 130633
Query: 2063 taaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaa 2121
|| ||||||||||||||||| || ||||| |||||||||||||||||||| ||||||||
Sbjct: 130634 tagacaagccgtggcaactcgttaccatcagtgtcaagcccaccactgtgccccaagaa 130692
Score = 131 bits (66), Expect = 2e-027
Identities = 118/136 (86%)
Strand = Plus / Plus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtc 2188
||||| || || ||||| || ||||||||||||||||| | |||||||||||||||||||
Sbjct: 130787 atcatgccagggtgatcccttgggttattcccaggccaagcagtgccatcagccatggtc 130846
Query: 2189 cagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaac 2248
|| ||||| ||||||| |||||| || || |||||||| |||| ||||||||| |||||
Sbjct: 130847 cacccctcttcaggtactttttgtgccttcgcaacaagagcattgatccgtaccttgaat 130906
Query: 2249 tcttcatactccctct 2264
||||||||||| ||||
Sbjct: 130907 tcttcatactctctct 130922
Score = 79.8 bits (40), Expect = 8e-012
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 1441 ggtggatgcaataaaaattggagactggccaaagcgtttctccaagctcttctgagacat 1500
|||||| |||||||||||||| || || ||||| |||||||| || |||||||| |||||
Sbjct: 129702 ggtggacgcaataaaaattggcgattgaccaaaacgtttctctaatctcttctgggacat 129761
Query: 1501 aagcagtgacctttcatcctcgtaacct 1528
|||| |||||||||||| || ||||||
Sbjct: 129762 cagcactgacctttcatcttcataacct 129789
>gb|AACV01011005.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg011005, whole
genome shotgun sequence
Length = 27493
Score = 363 bits (183), Expect = 4e-097
Identities = 458/552 (82%)
Strand = Plus / Plus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| ||||| || ||||| || |||||||| |||||||| || ||||| || || ||
Sbjct: 13549 ttctgagtaggcgaaatgaaaggatcgatcttgacccacagaagggagaagatcgacgcg 13608
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| ||||| || |||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 13609 aggaggatcgaccagacgatgacgatggtcggagtgcggttctgcctgcccatgagaccc 13668
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|| ||||| |||||||| ||||||||||||||||| | ||||| ||||| || || ||
Sbjct: 13669 ttgaggaaggggtagagatggaggatcacccagatggagaagaagagctttccaaagaga 13728
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
||||||||||||||||| || ||||| || ||||| || | || ||||| || || |||
Sbjct: 13729 ggaccccatgattggtaaccgctgttaatggcatatgatatacccgccaccatgcccacc 13788
Query: 655 aggttaatcacaagcacagtggtnnnnnnnatcagaagagttgtccacttgaacacatac 714
||||| || |||||||| ||||| || || ||| | |||||||||||||| ||
Sbjct: 13789 aggttgatgacaagcacggtggtcgggggaatgaggagactggtccacttgaacacgtat 13848
Query: 715 agctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcg 774
||||||||||| |||||||| ||||||| |||||||| || || |||||||| || ||
Sbjct: 13849 agctcagcaaagtcaccatcctcatcggacgcctttgaggtaacagtgaagttggtatca 13908
Query: 775 atccctgctagcacttttaagagaccttggaacacagcaaagagatgtgcagaggtgcca 834
|| ||||||| |||||| | ||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 13909 attcctgctaacactttcagaagaccctggaacacagcgaagagatgggcagatgtgcca 13968
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcga 894
||||||||||| ||||| |||||||||||||| ||||| || |||||||||||||||||
Sbjct: 13969 ccaatgacccagaactgttcatttctccaccagtcctcgataccaacaccactccatcgg 14028
Query: 895 agctccaaaataccagtggcgaagatagaagcaaaaagcaggatgaagaacgccccagca 954
||||||| ||||||||| ||||| || || || |||||||| || |||||| |||||||
Sbjct: 14029 agctccagaataccagttgcgaaaatggaggcgaaaagcagaataaagaacatcccagca 14088
Query: 955 taattgctaatc 966
||||||||||||
Sbjct: 14089 taattgctaatc 14100
Score = 357 bits (180), Expect = 2e-095
Identities = 306/348 (87%)
Strand = Plus / Plus
Query: 2263 cttcatagcccgcctttctttcacaaaagaaggttgtattttgtcctttaggtaatctat 2322
|||||| |||||||||||||| ||||| |||||||| ||||||||||| |||||||||||
Sbjct: 16221 cttcattgcccgcctttctttaacaaaggaaggttggattttgtccttcaggtaatctat 16280
Query: 2323 ctttcgagcaaagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaaggg 2382
||| |||||||||||||||||||||| | |||||||| ||||| ||||||||||| ||
Sbjct: 16281 tttttgagcaaagtaaaactctggagctcgtggttcaatattgtgcttcttgcaaaacgg 16340
Query: 2383 aacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctga 2442
|||||| ||||| ||||| ||||| ||||| || ||||| |||||||| |||||||||||
Sbjct: 16341 aacccacttcctagcaaattctgcagtttctgacagagcctcaaaagttaacatagctga 16400
Query: 2443 accgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatgga 2502
||| || ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 16401 accatcgtcagaaacatagcatgacactttgtcaacagggtaatccacagccagaatgga 16460
Query: 2503 caggacagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaa 2562
|| |||||||| | || || |||||||||||||| ||||||||||| ||||| |||||
Sbjct: 16461 caaaacagtgtttgctgtgatcagaggaggttcctttagtggatccaccgtactgacaaa 16520
Query: 2563 gacatcgattggagccaactgggatggctcaccctccctatcatatct 2610
|||||| || ||||| | ||| |||||||| |||||||||||||||||
Sbjct: 16521 gacatcaatgggagcaagctgtgatggctctccctccctatcatatct 16568
Score = 307 bits (155), Expect = 2e-080
Identities = 296/343 (86%)
Strand = Plus / Plus
Query: 968 caggaataataaatttgttggtgagtaaacagatagcaggaaggacgcagtatgctacta 1027
||||||| ||||||||||||||||| | ||||||||||||||| || || || || | |
Sbjct: 14321 caggaatgataaatttgttggtgaggagacagatagcaggaagcacacaataggcgataa 14380
Query: 1028 gtgggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagct 1087
|||| || |||||||||||||||||||||||||| ||||| ||||| ||||||||||| |
Sbjct: 14381 gtggaatggatgtaattggataaacaatggtgttaatgtaagccagcctctccagaagtt 14440
Query: 1088 ttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactg 1147
| | | |||||||||||||||||||||||||| ||||||||||| ||||| ||||| |
Sbjct: 14441 tcaaacgcccattgtaaccataccagataggacaatgtctgctaagcagaatctcaacag 14500
Query: 1148 aaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaac 1207
| ||||||||||| |||| ||||||||| ||||||||||| ||||| ||||| |||||||
Sbjct: 14501 acccaagagcccaacgtagcacttggttaagacgatcagacagattgattggcgcagaac 14560
Query: 1208 ccttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatct 1267
|||||||||| ||||| |||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 14561 ccttgaagcatggccgtggtggcatgcaatagattgatatccaacctcttgcgtgcattt 14620
Query: 1268 tgaaaccagttaaaatatcttcagtaacagagccatatatcca 1310
| || ||||| | |||||| |||||||| || ||||| |||||
Sbjct: 14621 taaatccagtcagaatatcctcagtaactgaaccatagatcca 14663
Score = 250 bits (126), Expect = 4e-063
Identities = 192/214 (89%)
Strand = Plus / Plus
Query: 1786 atcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatct 1845
|||||||||||| ||||| || || || |||||||| |||||||| || |||||||||||
Sbjct: 15501 atcaaagaagactatgttgcgattagcgtatcgatcgtgcaagtcaatgccatcaaatct 15560
Query: 1846 ttgtggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacat 1905
|||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 15561 ttgtgggaactgaacataacaagttttccttcctagtgcgggatccatcatgaagcacat 15620
Query: 1906 agcctctctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagata 1965
|| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 15621 tgcttctctaagagctttgctactgttgaagtagtgatcacaatccacattgagaagata 15680
Query: 1966 agcaccattcgtcaggacagctgatacgcgaatc 1999
|||||||| ||||| ||||| ||||| ||||||
Sbjct: 15681 ggcaccatttgtcagcacagcagatacacgaatc 15714
Score = 226 bits (114), Expect = 5e-056
Identities = 225/262 (85%)
Strand = Plus / Plus
Query: 1524 aaccttcaaatccctcttctatatcttccatgttgaagatgggagccgaagattctgttc 1583
||||||||| ||||||||||||||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 15166 aaccttcaatgccctcttctatatcttccatgttaaagataggagctgaagactctgttc 15225
Query: 1584 tcttcatatcacggtttttggaatcaatatagctcttgtccttcttttttcttccgccac 1643
||||||| |||||||||| ||| || ||||||||| ||| || ||||| || ||||
Sbjct: 15226 tcttcatcatacggtttttgctatccatgtagctcttgctctttttctttctgccaccac 15285
Query: 1644 agcaacttttaatgataatgttaggctccaaatcagcttctgtcaatacaggatcatagc 1703
|||| || |||| | ||||||||| ||||||||||| || || | ||||||||||||||
Sbjct: 15286 agcagctcttaacaacaatgttaggttccaaatcagcctcagttagtacaggatcatagc 15345
Query: 1704 catacaaggcctgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgc 1763
|||||||||||||||||||||| ||||| ||||||||||||||||| || || |||||||
Sbjct: 15346 catacaaggcctgcctattgaagcagcaacctgttcccacataaactggaccctgaatgc 15405
Query: 1764 catctagacccttcatattaat 1785
|||||| ||| ||||| |||||
Sbjct: 15406 catctaaacctttcatgttaat 15427
Score = 176 bits (89), Expect = 4e-041
Identities = 211/249 (84%), Gaps = 2/249 (0%)
Strand = Plus / Plus
Query: 2609 ctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttgggaactga 2668
||||||||||| || || ||||| ||||||||||| || || |||||||||||||| |||
Sbjct: 16667 ctcaatgcaagcctgtcaaggtatgtttcacggtttatcgggtaccactttgggaattga 16726
Query: 2669 tctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagccacaaccca 2728
||||| ||||| || || |||||||||| |||||| ||||||||||| |||||||| |||
Sbjct: 16727 tctaggagccaggataaggcaaaccaaatttcacagataacagatactagccacaatcca 16786
Query: 2729 taagcatcttccactggatgagttatacgatattgaaagaagaaacat-aggatgataag 2787
|||||||| |||||||||||| | ||||||||| |||||| ||||| |||||||||||
Sbjct: 16787 taagcatcccgcactggatgagtgacacgatattggaagaag-aacatcaggatgataag 16845
Query: 2788 ccggagaacaatcacgatccgataaaggttaagctcgtttggagatatcggcactatgcg 2847
||||||| || || ||||| |||||||| |||| ||||| || || |||||||||||
Sbjct: 16846 acggagaatgataacaatccggtaaaggttgagctggtttgaagggataggcactatgcg 16905
Query: 2848 acttagagg 2856
|| |||||
Sbjct: 16906 gctcagagg 16914
Score = 157 bits (79), Expect = 4e-035
Identities = 109/119 (91%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 15795 gcattcattgcaccagccttcttgtgatgctggaatcctggcctcttttcacgagagacg 15854
Query: 2063 taaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaa 2121
|| ||||||||||||||||| || ||||| |||||||||||||||||||| ||||||||
Sbjct: 15855 tagacaagccgtggcaactcgttaccatcagtgtcaagcccaccactgtgccccaagaa 15913
Score = 131 bits (66), Expect = 2e-027
Identities = 118/136 (86%)
Strand = Plus / Plus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtc 2188
||||| || || ||||| || ||||||||||||||||| | |||||||||||||||||||
Sbjct: 16008 atcatgccagggtgatcccttgggttattcccaggccaagcagtgccatcagccatggtc 16067
Query: 2189 cagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaac 2248
|| ||||| ||||||| |||||| || || |||||||| |||| ||||||||| |||||
Sbjct: 16068 cacccctcttcaggtactttttgtgccttcgcaacaagagcattgatccgtaccttgaat 16127
Query: 2249 tcttcatactccctct 2264
||||||||||| ||||
Sbjct: 16128 tcttcatactctctct 16143
Score = 79.8 bits (40), Expect = 8e-012
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 1441 ggtggatgcaataaaaattggagactggccaaagcgtttctccaagctcttctgagacat 1500
|||||| |||||||||||||| || || ||||| |||||||| || |||||||| |||||
Sbjct: 14923 ggtggacgcaataaaaattggcgattgaccaaaacgtttctctaatctcttctgggacat 14982
Query: 1501 aagcagtgacctttcatcctcgtaacct 1528
|||| |||||||||||| || ||||||
Sbjct: 14983 cagcactgacctttcatcttcataacct 15010
>ref|NT_107223.1| Oryza sativa (japonica cultivar-group)
Length = 1494033
Score = 363 bits (183), Expect = 4e-097
Identities = 458/552 (82%)
Strand = Plus / Plus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| ||||| || ||||| || |||||||| |||||||| || ||||| || || ||
Sbjct: 583976 ttctgagtaggcgaaatgaaaggatcgatcttgacccacagaagggagaagatcgacgcg 584035
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| ||||| || |||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 584036 aggaggatcgaccagacgatgacgatggtcggagtgcggttctgcctgcccatgagaccc 584095
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|| ||||| |||||||| ||||||||||||||||| | ||||| ||||| || || ||
Sbjct: 584096 ttgaggaaggggtagagatggaggatcacccagatggagaagaagagctttccaaagaga 584155
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
||||||||||||||||| || ||||| || ||||| || | || ||||| || || |||
Sbjct: 584156 ggaccccatgattggtaaccgctgttaatggcatatgatatacccgccaccatgcccacc 584215
Query: 655 aggttaatcacaagcacagtggtnnnnnnnatcagaagagttgtccacttgaacacatac 714
||||| || |||||||| ||||| || || ||| | |||||||||||||| ||
Sbjct: 584216 aggttgatgacaagcacggtggtcgggggaatgaggagactggtccacttgaacacgtat 584275
Query: 715 agctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcg 774
||||||||||| |||||||| ||||||| |||||||| || || |||||||| || ||
Sbjct: 584276 agctcagcaaagtcaccatcctcatcggacgcctttgaggtaacagtgaagttggtatca 584335
Query: 775 atccctgctagcacttttaagagaccttggaacacagcaaagagatgtgcagaggtgcca 834
|| ||||||| |||||| | ||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 584336 attcctgctaacactttcagaagaccctggaacacagcgaagagatgggcagatgtgcca 584395
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcga 894
||||||||||| ||||| |||||||||||||| ||||| || |||||||||||||||||
Sbjct: 584396 ccaatgacccagaactgttcatttctccaccagtcctcgataccaacaccactccatcgg 584455
Query: 895 agctccaaaataccagtggcgaagatagaagcaaaaagcaggatgaagaacgccccagca 954
||||||| ||||||||| ||||| || || || |||||||| || |||||| |||||||
Sbjct: 584456 agctccagaataccagttgcgaaaatggaggcgaaaagcagaataaagaacatcccagca 584515
Query: 955 taattgctaatc 966
||||||||||||
Sbjct: 584516 taattgctaatc 584527
Score = 357 bits (180), Expect = 2e-095
Identities = 306/348 (87%)
Strand = Plus / Plus
Query: 2263 cttcatagcccgcctttctttcacaaaagaaggttgtattttgtcctttaggtaatctat 2322
|||||| |||||||||||||| ||||| |||||||| ||||||||||| |||||||||||
Sbjct: 586648 cttcattgcccgcctttctttaacaaaggaaggttggattttgtccttcaggtaatctat 586707
Query: 2323 ctttcgagcaaagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaaggg 2382
||| |||||||||||||||||||||| | |||||||| ||||| ||||||||||| ||
Sbjct: 586708 tttttgagcaaagtaaaactctggagctcgtggttcaatattgtgcttcttgcaaaacgg 586767
Query: 2383 aacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctga 2442
|||||| ||||| ||||| ||||| ||||| || ||||| |||||||| |||||||||||
Sbjct: 586768 aacccacttcctagcaaattctgcagtttctgacagagcctcaaaagttaacatagctga 586827
Query: 2443 accgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatgga 2502
||| || ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 586828 accatcgtcagaaacatagcatgacactttgtcaacagggtaatccacagccagaatgga 586887
Query: 2503 caggacagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaa 2562
|| |||||||| | || || |||||||||||||| ||||||||||| ||||| |||||
Sbjct: 586888 caaaacagtgtttgctgtgatcagaggaggttcctttagtggatccaccgtactgacaaa 586947
Query: 2563 gacatcgattggagccaactgggatggctcaccctccctatcatatct 2610
|||||| || ||||| | ||| |||||||| |||||||||||||||||
Sbjct: 586948 gacatcaatgggagcaagctgtgatggctctccctccctatcatatct 586995
Score = 307 bits (155), Expect = 2e-080
Identities = 296/343 (86%)
Strand = Plus / Plus
Query: 968 caggaataataaatttgttggtgagtaaacagatagcaggaaggacgcagtatgctacta 1027
||||||| ||||||||||||||||| | ||||||||||||||| || || || || | |
Sbjct: 584748 caggaatgataaatttgttggtgaggagacagatagcaggaagcacacaataggcgataa 584807
Query: 1028 gtgggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagct 1087
|||| || |||||||||||||||||||||||||| ||||| ||||| ||||||||||| |
Sbjct: 584808 gtggaatggatgtaattggataaacaatggtgttaatgtaagccagcctctccagaagtt 584867
Query: 1088 ttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactg 1147
| | | |||||||||||||||||||||||||| ||||||||||| ||||| ||||| |
Sbjct: 584868 tcaaacgcccattgtaaccataccagataggacaatgtctgctaagcagaatctcaacag 584927
Query: 1148 aaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaac 1207
| ||||||||||| |||| ||||||||| ||||||||||| ||||| ||||| |||||||
Sbjct: 584928 acccaagagcccaacgtagcacttggttaagacgatcagacagattgattggcgcagaac 584987
Query: 1208 ccttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatct 1267
|||||||||| ||||| |||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 584988 ccttgaagcatggccgtggtggcatgcaatagattgatatccaacctcttgcgtgcattt 585047
Query: 1268 tgaaaccagttaaaatatcttcagtaacagagccatatatcca 1310
| || ||||| | |||||| |||||||| || ||||| |||||
Sbjct: 585048 taaatccagtcagaatatcctcagtaactgaaccatagatcca 585090
Score = 250 bits (126), Expect = 4e-063
Identities = 192/214 (89%)
Strand = Plus / Plus
Query: 1786 atcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatct 1845
|||||||||||| ||||| || || || |||||||| |||||||| || |||||||||||
Sbjct: 585928 atcaaagaagactatgttgcgattagcgtatcgatcgtgcaagtcaatgccatcaaatct 585987
Query: 1846 ttgtggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacat 1905
|||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 585988 ttgtgggaactgaacataacaagttttccttcctagtgcgggatccatcatgaagcacat 586047
Query: 1906 agcctctctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagata 1965
|| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 586048 tgcttctctaagagctttgctactgttgaagtagtgatcacaatccacattgagaagata 586107
Query: 1966 agcaccattcgtcaggacagctgatacgcgaatc 1999
|||||||| ||||| ||||| ||||| ||||||
Sbjct: 586108 ggcaccatttgtcagcacagcagatacacgaatc 586141
Score = 226 bits (114), Expect = 5e-056
Identities = 225/262 (85%)
Strand = Plus / Plus
Query: 1524 aaccttcaaatccctcttctatatcttccatgttgaagatgggagccgaagattctgttc 1583
||||||||| ||||||||||||||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 585593 aaccttcaatgccctcttctatatcttccatgttaaagataggagctgaagactctgttc 585652
Query: 1584 tcttcatatcacggtttttggaatcaatatagctcttgtccttcttttttcttccgccac 1643
||||||| |||||||||| ||| || ||||||||| ||| || ||||| || ||||
Sbjct: 585653 tcttcatcatacggtttttgctatccatgtagctcttgctctttttctttctgccaccac 585712
Query: 1644 agcaacttttaatgataatgttaggctccaaatcagcttctgtcaatacaggatcatagc 1703
|||| || |||| | ||||||||| ||||||||||| || || | ||||||||||||||
Sbjct: 585713 agcagctcttaacaacaatgttaggttccaaatcagcctcagttagtacaggatcatagc 585772
Query: 1704 catacaaggcctgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgc 1763
|||||||||||||||||||||| ||||| ||||||||||||||||| || || |||||||
Sbjct: 585773 catacaaggcctgcctattgaagcagcaacctgttcccacataaactggaccctgaatgc 585832
Query: 1764 catctagacccttcatattaat 1785
|||||| ||| ||||| |||||
Sbjct: 585833 catctaaacctttcatgttaat 585854
Score = 176 bits (89), Expect = 4e-041
Identities = 211/249 (84%), Gaps = 2/249 (0%)
Strand = Plus / Plus
Query: 2609 ctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttgggaactga 2668
||||||||||| || || ||||| ||||||||||| || || |||||||||||||| |||
Sbjct: 587094 ctcaatgcaagcctgtcaaggtatgtttcacggtttatcgggtaccactttgggaattga 587153
Query: 2669 tctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagccacaaccca 2728
||||| ||||| || || |||||||||| |||||| ||||||||||| |||||||| |||
Sbjct: 587154 tctaggagccaggataaggcaaaccaaatttcacagataacagatactagccacaatcca 587213
Query: 2729 taagcatcttccactggatgagttatacgatattgaaagaagaaacat-aggatgataag 2787
|||||||| |||||||||||| | ||||||||| |||||| ||||| |||||||||||
Sbjct: 587214 taagcatcccgcactggatgagtgacacgatattggaagaag-aacatcaggatgataag 587272
Query: 2788 ccggagaacaatcacgatccgataaaggttaagctcgtttggagatatcggcactatgcg 2847
||||||| || || ||||| |||||||| |||| ||||| || || |||||||||||
Sbjct: 587273 acggagaatgataacaatccggtaaaggttgagctggtttgaagggataggcactatgcg 587332
Query: 2848 acttagagg 2856
|| |||||
Sbjct: 587333 gctcagagg 587341
Score = 157 bits (79), Expect = 4e-035
Identities = 109/119 (91%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 586222 gcattcattgcaccagccttcttgtgatgctggaatcctggcctcttttcacgagagacg 586281
Query: 2063 taaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaa 2121
|| ||||||||||||||||| || ||||| |||||||||||||||||||| ||||||||
Sbjct: 586282 tagacaagccgtggcaactcgttaccatcagtgtcaagcccaccactgtgccccaagaa 586340
Score = 131 bits (66), Expect = 2e-027
Identities = 118/136 (86%)
Strand = Plus / Plus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtc 2188
||||| || || ||||| || ||||||||||||||||| | |||||||||||||||||||
Sbjct: 586435 atcatgccagggtgatcccttgggttattcccaggccaagcagtgccatcagccatggtc 586494
Query: 2189 cagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaac 2248
|| ||||| ||||||| |||||| || || |||||||| |||| ||||||||| |||||
Sbjct: 586495 cacccctcttcaggtactttttgtgccttcgcaacaagagcattgatccgtaccttgaat 586554
Query: 2249 tcttcatactccctct 2264
||||||||||| ||||
Sbjct: 586555 tcttcatactctctct 586570
Score = 79.8 bits (40), Expect = 8e-012
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 1441 ggtggatgcaataaaaattggagactggccaaagcgtttctccaagctcttctgagacat 1500
|||||| |||||||||||||| || || ||||| |||||||| || |||||||| |||||
Sbjct: 585350 ggtggacgcaataaaaattggcgattgaccaaaacgtttctctaatctcttctgggacat 585409
Query: 1501 aagcagtgacctttcatcctcgtaacct 1528
|||| |||||||||||| || ||||||
Sbjct: 585410 cagcactgacctttcatcttcataacct 585437
>gb|CH401191.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000028 genomic
scaffold, whole genome shotgun sequence
Length = 7678539
Score = 363 bits (183), Expect = 4e-097
Identities = 458/552 (82%)
Strand = Plus / Plus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| ||||| || ||||| || |||||||| |||||||| || ||||| || || ||
Sbjct: 4397525 ttctgagtaggcgaaatgaaaggatcgatcttgacccacagaagggagaagatcgacgcg 4397584
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| ||||| || |||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 4397585 aggaggatcgaccagacgatgacgatggtcggagtgcggttctgcctgcccatgagaccc 4397644
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|| ||||| |||||||| ||||||||||||||||| | ||||| ||||| || || ||
Sbjct: 4397645 ttgaggaaggggtagagatggaggatcacccagatggagaagaagagctttccaaagaga 4397704
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
||||||||||||||||| || ||||| || ||||| || | || ||||| || || |||
Sbjct: 4397705 ggaccccatgattggtaaccgctgttaatggcatatgatatacccgccaccatgcccacc 4397764
Query: 655 aggttaatcacaagcacagtggtnnnnnnnatcagaagagttgtccacttgaacacatac 714
||||| || |||||||| ||||| || || ||| | |||||||||||||| ||
Sbjct: 4397765 aggttgatgacaagcacggtggtcgggggaatgaggagactggtccacttgaacacgtat 4397824
Query: 715 agctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcg 774
||||||||||| |||||||| ||||||| |||||||| || || |||||||| || ||
Sbjct: 4397825 agctcagcaaagtcaccatcctcatcggacgcctttgaggtaacagtgaagttggtatca 4397884
Query: 775 atccctgctagcacttttaagagaccttggaacacagcaaagagatgtgcagaggtgcca 834
|| ||||||| |||||| | ||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 4397885 attcctgctaacactttcagaagaccctggaacacagcgaagagatgggcagatgtgcca 4397944
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcga 894
||||||||||| ||||| |||||||||||||| ||||| || |||||||||||||||||
Sbjct: 4397945 ccaatgacccagaactgttcatttctccaccagtcctcgataccaacaccactccatcgg 4398004
Query: 895 agctccaaaataccagtggcgaagatagaagcaaaaagcaggatgaagaacgccccagca 954
||||||| ||||||||| ||||| || || || |||||||| || |||||| |||||||
Sbjct: 4398005 agctccagaataccagttgcgaaaatggaggcgaaaagcagaataaagaacatcccagca 4398064
Query: 955 taattgctaatc 966
||||||||||||
Sbjct: 4398065 taattgctaatc 4398076
Score = 357 bits (180), Expect = 2e-095
Identities = 306/348 (87%)
Strand = Plus / Plus
Query: 2263 cttcatagcccgcctttctttcacaaaagaaggttgtattttgtcctttaggtaatctat 2322
|||||| |||||||||||||| ||||| |||||||| ||||||||||| |||||||||||
Sbjct: 4400197 cttcattgcccgcctttctttaacaaaggaaggttggattttgtccttcaggtaatctat 4400256
Query: 2323 ctttcgagcaaagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaaggg 2382
||| |||||||||||||||||||||| | |||||||| ||||| ||||||||||| ||
Sbjct: 4400257 tttttgagcaaagtaaaactctggagctcgtggttcaatattgtgcttcttgcaaaacgg 4400316
Query: 2383 aacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctga 2442
|||||| ||||| ||||| ||||| ||||| || ||||| |||||||| |||||||||||
Sbjct: 4400317 aacccacttcctagcaaattctgcagtttctgacagagcctcaaaagttaacatagctga 4400376
Query: 2443 accgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatgga 2502
||| || ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 4400377 accatcgtcagaaacatagcatgacactttgtcaacagggtaatccacagccagaatgga 4400436
Query: 2503 caggacagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaa 2562
|| |||||||| | || || |||||||||||||| ||||||||||| ||||| |||||
Sbjct: 4400437 caaaacagtgtttgctgtgatcagaggaggttcctttagtggatccaccgtactgacaaa 4400496
Query: 2563 gacatcgattggagccaactgggatggctcaccctccctatcatatct 2610
|||||| || ||||| | ||| |||||||| |||||||||||||||||
Sbjct: 4400497 gacatcaatgggagcaagctgtgatggctctccctccctatcatatct 4400544
Score = 307 bits (155), Expect = 2e-080
Identities = 296/343 (86%)
Strand = Plus / Plus
Query: 968 caggaataataaatttgttggtgagtaaacagatagcaggaaggacgcagtatgctacta 1027
||||||| ||||||||||||||||| | ||||||||||||||| || || || || | |
Sbjct: 4398297 caggaatgataaatttgttggtgaggagacagatagcaggaagcacacaataggcgataa 4398356
Query: 1028 gtgggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagct 1087
|||| || |||||||||||||||||||||||||| ||||| ||||| ||||||||||| |
Sbjct: 4398357 gtggaatggatgtaattggataaacaatggtgttaatgtaagccagcctctccagaagtt 4398416
Query: 1088 ttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactg 1147
| | | |||||||||||||||||||||||||| ||||||||||| ||||| ||||| |
Sbjct: 4398417 tcaaacgcccattgtaaccataccagataggacaatgtctgctaagcagaatctcaacag 4398476
Query: 1148 aaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaac 1207
| ||||||||||| |||| ||||||||| ||||||||||| ||||| ||||| |||||||
Sbjct: 4398477 acccaagagcccaacgtagcacttggttaagacgatcagacagattgattggcgcagaac 4398536
Query: 1208 ccttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatct 1267
|||||||||| ||||| |||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 4398537 ccttgaagcatggccgtggtggcatgcaatagattgatatccaacctcttgcgtgcattt 4398596
Query: 1268 tgaaaccagttaaaatatcttcagtaacagagccatatatcca 1310
| || ||||| | |||||| |||||||| || ||||| |||||
Sbjct: 4398597 taaatccagtcagaatatcctcagtaactgaaccatagatcca 4398639
Score = 250 bits (126), Expect = 4e-063
Identities = 192/214 (89%)
Strand = Plus / Plus
Query: 1786 atcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatct 1845
|||||||||||| ||||| || || || |||||||| |||||||| || |||||||||||
Sbjct: 4399477 atcaaagaagactatgttgcgattagcgtatcgatcgtgcaagtcaatgccatcaaatct 4399536
Query: 1846 ttgtggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacat 1905
|||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 4399537 ttgtgggaactgaacataacaagttttccttcctagtgcgggatccatcatgaagcacat 4399596
Query: 1906 agcctctctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagata 1965
|| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 4399597 tgcttctctaagagctttgctactgttgaagtagtgatcacaatccacattgagaagata 4399656
Query: 1966 agcaccattcgtcaggacagctgatacgcgaatc 1999
|||||||| ||||| ||||| ||||| ||||||
Sbjct: 4399657 ggcaccatttgtcagcacagcagatacacgaatc 4399690
Score = 226 bits (114), Expect = 5e-056
Identities = 225/262 (85%)
Strand = Plus / Plus
Query: 1524 aaccttcaaatccctcttctatatcttccatgttgaagatgggagccgaagattctgttc 1583
||||||||| ||||||||||||||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 4399142 aaccttcaatgccctcttctatatcttccatgttaaagataggagctgaagactctgttc 4399201
Query: 1584 tcttcatatcacggtttttggaatcaatatagctcttgtccttcttttttcttccgccac 1643
||||||| |||||||||| ||| || ||||||||| ||| || ||||| || ||||
Sbjct: 4399202 tcttcatcatacggtttttgctatccatgtagctcttgctctttttctttctgccaccac 4399261
Query: 1644 agcaacttttaatgataatgttaggctccaaatcagcttctgtcaatacaggatcatagc 1703
|||| || |||| | ||||||||| ||||||||||| || || | ||||||||||||||
Sbjct: 4399262 agcagctcttaacaacaatgttaggttccaaatcagcctcagttagtacaggatcatagc 4399321
Query: 1704 catacaaggcctgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgc 1763
|||||||||||||||||||||| ||||| ||||||||||||||||| || || |||||||
Sbjct: 4399322 catacaaggcctgcctattgaagcagcaacctgttcccacataaactggaccctgaatgc 4399381
Query: 1764 catctagacccttcatattaat 1785
|||||| ||| ||||| |||||
Sbjct: 4399382 catctaaacctttcatgttaat 4399403
Score = 176 bits (89), Expect = 4e-041
Identities = 211/249 (84%), Gaps = 2/249 (0%)
Strand = Plus / Plus
Query: 2609 ctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttgggaactga 2668
||||||||||| || || ||||| ||||||||||| || || |||||||||||||| |||
Sbjct: 4400643 ctcaatgcaagcctgtcaaggtatgtttcacggtttatcgggtaccactttgggaattga 4400702
Query: 2669 tctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagccacaaccca 2728
||||| ||||| || || |||||||||| |||||| ||||||||||| |||||||| |||
Sbjct: 4400703 tctaggagccaggataaggcaaaccaaatttcacagataacagatactagccacaatcca 4400762
Query: 2729 taagcatcttccactggatgagttatacgatattgaaagaagaaacat-aggatgataag 2787
|||||||| |||||||||||| | ||||||||| |||||| ||||| |||||||||||
Sbjct: 4400763 taagcatcccgcactggatgagtgacacgatattggaagaag-aacatcaggatgataag 4400821
Query: 2788 ccggagaacaatcacgatccgataaaggttaagctcgtttggagatatcggcactatgcg 2847
||||||| || || ||||| |||||||| |||| ||||| || || |||||||||||
Sbjct: 4400822 acggagaatgataacaatccggtaaaggttgagctggtttgaagggataggcactatgcg 4400881
Query: 2848 acttagagg 2856
|| |||||
Sbjct: 4400882 gctcagagg 4400890
Score = 157 bits (79), Expect = 4e-035
Identities = 109/119 (91%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 4399771 gcattcattgcaccagccttcttgtgatgctggaatcctggcctcttttcacgagagacg 4399830
Query: 2063 taaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaa 2121
|| ||||||||||||||||| || ||||| |||||||||||||||||||| ||||||||
Sbjct: 4399831 tagacaagccgtggcaactcgttaccatcagtgtcaagcccaccactgtgccccaagaa 4399889
Score = 131 bits (66), Expect = 2e-027
Identities = 118/136 (86%)
Strand = Plus / Plus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtc 2188
||||| || || ||||| || ||||||||||||||||| | |||||||||||||||||||
Sbjct: 4399984 atcatgccagggtgatcccttgggttattcccaggccaagcagtgccatcagccatggtc 4400043
Query: 2189 cagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaac 2248
|| ||||| ||||||| |||||| || || |||||||| |||| ||||||||| |||||
Sbjct: 4400044 cacccctcttcaggtactttttgtgccttcgcaacaagagcattgatccgtaccttgaat 4400103
Query: 2249 tcttcatactccctct 2264
||||||||||| ||||
Sbjct: 4400104 tcttcatactctctct 4400119
Score = 79.8 bits (40), Expect = 8e-012
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 1441 ggtggatgcaataaaaattggagactggccaaagcgtttctccaagctcttctgagacat 1500
|||||| |||||||||||||| || || ||||| |||||||| || |||||||| |||||
Sbjct: 4398899 ggtggacgcaataaaaattggcgattgaccaaaacgtttctctaatctcttctgggacat 4398958
Query: 1501 aagcagtgacctttcatcctcgtaacct 1528
|||| |||||||||||| || ||||||
Sbjct: 4398959 cagcactgacctttcatcttcataacct 4398986
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 363 bits (183), Expect = 4e-097
Identities = 458/552 (82%)
Strand = Plus / Plus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| ||||| || ||||| || |||||||| |||||||| || ||||| || || ||
Sbjct: 4397525 ttctgagtaggcgaaatgaaaggatcgatcttgacccacagaagggagaagatcgacgcg 4397584
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| ||||| || |||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 4397585 aggaggatcgaccagacgatgacgatggtcggagtgcggttctgcctgcccatgagaccc 4397644
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|| ||||| |||||||| ||||||||||||||||| | ||||| ||||| || || ||
Sbjct: 4397645 ttgaggaaggggtagagatggaggatcacccagatggagaagaagagctttccaaagaga 4397704
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
||||||||||||||||| || ||||| || ||||| || | || ||||| || || |||
Sbjct: 4397705 ggaccccatgattggtaaccgctgttaatggcatatgatatacccgccaccatgcccacc 4397764
Query: 655 aggttaatcacaagcacagtggtnnnnnnnatcagaagagttgtccacttgaacacatac 714
||||| || |||||||| ||||| || || ||| | |||||||||||||| ||
Sbjct: 4397765 aggttgatgacaagcacggtggtcgggggaatgaggagactggtccacttgaacacgtat 4397824
Query: 715 agctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcg 774
||||||||||| |||||||| ||||||| |||||||| || || |||||||| || ||
Sbjct: 4397825 agctcagcaaagtcaccatcctcatcggacgcctttgaggtaacagtgaagttggtatca 4397884
Query: 775 atccctgctagcacttttaagagaccttggaacacagcaaagagatgtgcagaggtgcca 834
|| ||||||| |||||| | ||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 4397885 attcctgctaacactttcagaagaccctggaacacagcgaagagatgggcagatgtgcca 4397944
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcga 894
||||||||||| ||||| |||||||||||||| ||||| || |||||||||||||||||
Sbjct: 4397945 ccaatgacccagaactgttcatttctccaccagtcctcgataccaacaccactccatcgg 4398004
Query: 895 agctccaaaataccagtggcgaagatagaagcaaaaagcaggatgaagaacgccccagca 954
||||||| ||||||||| ||||| || || || |||||||| || |||||| |||||||
Sbjct: 4398005 agctccagaataccagttgcgaaaatggaggcgaaaagcagaataaagaacatcccagca 4398064
Query: 955 taattgctaatc 966
||||||||||||
Sbjct: 4398065 taattgctaatc 4398076
Score = 357 bits (180), Expect = 2e-095
Identities = 306/348 (87%)
Strand = Plus / Plus
Query: 2263 cttcatagcccgcctttctttcacaaaagaaggttgtattttgtcctttaggtaatctat 2322
|||||| |||||||||||||| ||||| |||||||| ||||||||||| |||||||||||
Sbjct: 4400197 cttcattgcccgcctttctttaacaaaggaaggttggattttgtccttcaggtaatctat 4400256
Query: 2323 ctttcgagcaaagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaaggg 2382
||| |||||||||||||||||||||| | |||||||| ||||| ||||||||||| ||
Sbjct: 4400257 tttttgagcaaagtaaaactctggagctcgtggttcaatattgtgcttcttgcaaaacgg 4400316
Query: 2383 aacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctga 2442
|||||| ||||| ||||| ||||| ||||| || ||||| |||||||| |||||||||||
Sbjct: 4400317 aacccacttcctagcaaattctgcagtttctgacagagcctcaaaagttaacatagctga 4400376
Query: 2443 accgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatgga 2502
||| || ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 4400377 accatcgtcagaaacatagcatgacactttgtcaacagggtaatccacagccagaatgga 4400436
Query: 2503 caggacagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaa 2562
|| |||||||| | || || |||||||||||||| ||||||||||| ||||| |||||
Sbjct: 4400437 caaaacagtgtttgctgtgatcagaggaggttcctttagtggatccaccgtactgacaaa 4400496
Query: 2563 gacatcgattggagccaactgggatggctcaccctccctatcatatct 2610
|||||| || ||||| | ||| |||||||| |||||||||||||||||
Sbjct: 4400497 gacatcaatgggagcaagctgtgatggctctccctccctatcatatct 4400544
Score = 307 bits (155), Expect = 2e-080
Identities = 296/343 (86%)
Strand = Plus / Plus
Query: 968 caggaataataaatttgttggtgagtaaacagatagcaggaaggacgcagtatgctacta 1027
||||||| ||||||||||||||||| | ||||||||||||||| || || || || | |
Sbjct: 4398297 caggaatgataaatttgttggtgaggagacagatagcaggaagcacacaataggcgataa 4398356
Query: 1028 gtgggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagct 1087
|||| || |||||||||||||||||||||||||| ||||| ||||| ||||||||||| |
Sbjct: 4398357 gtggaatggatgtaattggataaacaatggtgttaatgtaagccagcctctccagaagtt 4398416
Query: 1088 ttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactg 1147
| | | |||||||||||||||||||||||||| ||||||||||| ||||| ||||| |
Sbjct: 4398417 tcaaacgcccattgtaaccataccagataggacaatgtctgctaagcagaatctcaacag 4398476
Query: 1148 aaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaac 1207
| ||||||||||| |||| ||||||||| ||||||||||| ||||| ||||| |||||||
Sbjct: 4398477 acccaagagcccaacgtagcacttggttaagacgatcagacagattgattggcgcagaac 4398536
Query: 1208 ccttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatct 1267
|||||||||| ||||| |||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 4398537 ccttgaagcatggccgtggtggcatgcaatagattgatatccaacctcttgcgtgcattt 4398596
Query: 1268 tgaaaccagttaaaatatcttcagtaacagagccatatatcca 1310
| || ||||| | |||||| |||||||| || ||||| |||||
Sbjct: 4398597 taaatccagtcagaatatcctcagtaactgaaccatagatcca 4398639
Score = 250 bits (126), Expect = 4e-063
Identities = 192/214 (89%)
Strand = Plus / Plus
Query: 1786 atcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatct 1845
|||||||||||| ||||| || || || |||||||| |||||||| || |||||||||||
Sbjct: 4399477 atcaaagaagactatgttgcgattagcgtatcgatcgtgcaagtcaatgccatcaaatct 4399536
Query: 1846 ttgtggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacat 1905
|||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 4399537 ttgtgggaactgaacataacaagttttccttcctagtgcgggatccatcatgaagcacat 4399596
Query: 1906 agcctctctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagata 1965
|| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 4399597 tgcttctctaagagctttgctactgttgaagtagtgatcacaatccacattgagaagata 4399656
Query: 1966 agcaccattcgtcaggacagctgatacgcgaatc 1999
|||||||| ||||| ||||| ||||| ||||||
Sbjct: 4399657 ggcaccatttgtcagcacagcagatacacgaatc 4399690
Score = 226 bits (114), Expect = 5e-056
Identities = 225/262 (85%)
Strand = Plus / Plus
Query: 1524 aaccttcaaatccctcttctatatcttccatgttgaagatgggagccgaagattctgttc 1583
||||||||| ||||||||||||||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 4399142 aaccttcaatgccctcttctatatcttccatgttaaagataggagctgaagactctgttc 4399201
Query: 1584 tcttcatatcacggtttttggaatcaatatagctcttgtccttcttttttcttccgccac 1643
||||||| |||||||||| ||| || ||||||||| ||| || ||||| || ||||
Sbjct: 4399202 tcttcatcatacggtttttgctatccatgtagctcttgctctttttctttctgccaccac 4399261
Query: 1644 agcaacttttaatgataatgttaggctccaaatcagcttctgtcaatacaggatcatagc 1703
|||| || |||| | ||||||||| ||||||||||| || || | ||||||||||||||
Sbjct: 4399262 agcagctcttaacaacaatgttaggttccaaatcagcctcagttagtacaggatcatagc 4399321
Query: 1704 catacaaggcctgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgc 1763
|||||||||||||||||||||| ||||| ||||||||||||||||| || || |||||||
Sbjct: 4399322 catacaaggcctgcctattgaagcagcaacctgttcccacataaactggaccctgaatgc 4399381
Query: 1764 catctagacccttcatattaat 1785
|||||| ||| ||||| |||||
Sbjct: 4399382 catctaaacctttcatgttaat 4399403
Score = 176 bits (89), Expect = 4e-041
Identities = 211/249 (84%), Gaps = 2/249 (0%)
Strand = Plus / Plus
Query: 2609 ctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttgggaactga 2668
||||||||||| || || ||||| ||||||||||| || || |||||||||||||| |||
Sbjct: 4400643 ctcaatgcaagcctgtcaaggtatgtttcacggtttatcgggtaccactttgggaattga 4400702
Query: 2669 tctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagccacaaccca 2728
||||| ||||| || || |||||||||| |||||| ||||||||||| |||||||| |||
Sbjct: 4400703 tctaggagccaggataaggcaaaccaaatttcacagataacagatactagccacaatcca 4400762
Query: 2729 taagcatcttccactggatgagttatacgatattgaaagaagaaacat-aggatgataag 2787
|||||||| |||||||||||| | ||||||||| |||||| ||||| |||||||||||
Sbjct: 4400763 taagcatcccgcactggatgagtgacacgatattggaagaag-aacatcaggatgataag 4400821
Query: 2788 ccggagaacaatcacgatccgataaaggttaagctcgtttggagatatcggcactatgcg 2847
||||||| || || ||||| |||||||| |||| ||||| || || |||||||||||
Sbjct: 4400822 acggagaatgataacaatccggtaaaggttgagctggtttgaagggataggcactatgcg 4400881
Query: 2848 acttagagg 2856
|| |||||
Sbjct: 4400882 gctcagagg 4400890
Score = 157 bits (79), Expect = 4e-035
Identities = 109/119 (91%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 4399771 gcattcattgcaccagccttcttgtgatgctggaatcctggcctcttttcacgagagacg 4399830
Query: 2063 taaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaa 2121
|| ||||||||||||||||| || ||||| |||||||||||||||||||| ||||||||
Sbjct: 4399831 tagacaagccgtggcaactcgttaccatcagtgtcaagcccaccactgtgccccaagaa 4399889
Score = 131 bits (66), Expect = 2e-027
Identities = 118/136 (86%)
Strand = Plus / Plus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtc 2188
||||| || || ||||| || ||||||||||||||||| | |||||||||||||||||||
Sbjct: 4399984 atcatgccagggtgatcccttgggttattcccaggccaagcagtgccatcagccatggtc 4400043
Query: 2189 cagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaac 2248
|| ||||| ||||||| |||||| || || |||||||| |||| ||||||||| |||||
Sbjct: 4400044 cacccctcttcaggtactttttgtgccttcgcaacaagagcattgatccgtaccttgaat 4400103
Query: 2249 tcttcatactccctct 2264
||||||||||| ||||
Sbjct: 4400104 tcttcatactctctct 4400119
Score = 79.8 bits (40), Expect = 8e-012
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 1441 ggtggatgcaataaaaattggagactggccaaagcgtttctccaagctcttctgagacat 1500
|||||| |||||||||||||| || || ||||| |||||||| || |||||||| |||||
Sbjct: 4398899 ggtggacgcaataaaaattggcgattgaccaaaacgtttctctaatctcttctgggacat 4398958
Query: 1501 aagcagtgacctttcatcctcgtaacct 1528
|||| |||||||||||| || ||||||
Sbjct: 4398959 cagcactgacctttcatcttcataacct 4398986
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 363 bits (183), Expect = 4e-097
Identities = 458/552 (82%)
Strand = Plus / Plus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| ||||| || ||||| || |||||||| |||||||| || ||||| || || ||
Sbjct: 4506704 ttctgagtaggcgaaatgaaaggatcgatcttgacccacagaagggagaagatcgacgcg 4506763
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| ||||| || |||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 4506764 aggaggatcgaccagacgatgacgatggtcggagtgcggttctgcctgcccatgagaccc 4506823
Query: 535 ttcaggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagt 594
|| ||||| |||||||| ||||||||||||||||| | ||||| ||||| || || ||
Sbjct: 4506824 ttgaggaaggggtagagatggaggatcacccagatggagaagaagagctttccaaagaga 4506883
Query: 595 ggaccccatgattggtagccactgttgatagcatacgacactccagccactataccaacc 654
||||||||||||||||| || ||||| || ||||| || | || ||||| || || |||
Sbjct: 4506884 ggaccccatgattggtaaccgctgttaatggcatatgatatacccgccaccatgcccacc 4506943
Query: 655 aggttaatcacaagcacagtggtnnnnnnnatcagaagagttgtccacttgaacacatac 714
||||| || |||||||| ||||| || || ||| | |||||||||||||| ||
Sbjct: 4506944 aggttgatgacaagcacggtggtcgggggaatgaggagactggtccacttgaacacgtat 4507003
Query: 715 agctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcg 774
||||||||||| |||||||| ||||||| |||||||| || || |||||||| || ||
Sbjct: 4507004 agctcagcaaagtcaccatcctcatcggacgcctttgaggtaacagtgaagttggtatca 4507063
Query: 775 atccctgctagcacttttaagagaccttggaacacagcaaagagatgtgcagaggtgcca 834
|| ||||||| |||||| | ||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 4507064 attcctgctaacactttcagaagaccctggaacacagcgaagagatgggcagatgtgcca 4507123
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcga 894
||||||||||| ||||| |||||||||||||| ||||| || |||||||||||||||||
Sbjct: 4507124 ccaatgacccagaactgttcatttctccaccagtcctcgataccaacaccactccatcgg 4507183
Query: 895 agctccaaaataccagtggcgaagatagaagcaaaaagcaggatgaagaacgccccagca 954
||||||| ||||||||| ||||| || || || |||||||| || |||||| |||||||
Sbjct: 4507184 agctccagaataccagttgcgaaaatggaggcgaaaagcagaataaagaacatcccagca 4507243
Query: 955 taattgctaatc 966
||||||||||||
Sbjct: 4507244 taattgctaatc 4507255
Score = 357 bits (180), Expect = 2e-095
Identities = 306/348 (87%)
Strand = Plus / Plus
Query: 2263 cttcatagcccgcctttctttcacaaaagaaggttgtattttgtcctttaggtaatctat 2322
|||||| |||||||||||||| ||||| |||||||| ||||||||||| |||||||||||
Sbjct: 4509376 cttcattgcccgcctttctttaacaaaggaaggttggattttgtccttcaggtaatctat 4509435
Query: 2323 ctttcgagcaaagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaaggg 2382
||| |||||||||||||||||||||| | |||||||| ||||| ||||||||||| ||
Sbjct: 4509436 tttttgagcaaagtaaaactctggagctcgtggttcaatattgtgcttcttgcaaaacgg 4509495
Query: 2383 aacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctga 2442
|||||| ||||| ||||| ||||| ||||| || ||||| |||||||| |||||||||||
Sbjct: 4509496 aacccacttcctagcaaattctgcagtttctgacagagcctcaaaagttaacatagctga 4509555
Query: 2443 accgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatgga 2502
||| || ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 4509556 accatcgtcagaaacatagcatgacactttgtcaacagggtaatccacagccagaatgga 4509615
Query: 2503 caggacagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaa 2562
|| |||||||| | || || |||||||||||||| ||||||||||| ||||| |||||
Sbjct: 4509616 caaaacagtgtttgctgtgatcagaggaggttcctttagtggatccaccgtactgacaaa 4509675
Query: 2563 gacatcgattggagccaactgggatggctcaccctccctatcatatct 2610
|||||| || ||||| | ||| |||||||| |||||||||||||||||
Sbjct: 4509676 gacatcaatgggagcaagctgtgatggctctccctccctatcatatct 4509723
Score = 307 bits (155), Expect = 2e-080
Identities = 296/343 (86%)
Strand = Plus / Plus
Query: 968 caggaataataaatttgttggtgagtaaacagatagcaggaaggacgcagtatgctacta 1027
||||||| ||||||||||||||||| | ||||||||||||||| || || || || | |
Sbjct: 4507476 caggaatgataaatttgttggtgaggagacagatagcaggaagcacacaataggcgataa 4507535
Query: 1028 gtgggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagct 1087
|||| || |||||||||||||||||||||||||| ||||| ||||| ||||||||||| |
Sbjct: 4507536 gtggaatggatgtaattggataaacaatggtgttaatgtaagccagcctctccagaagtt 4507595
Query: 1088 ttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaactg 1147
| | | |||||||||||||||||||||||||| ||||||||||| ||||| ||||| |
Sbjct: 4507596 tcaaacgcccattgtaaccataccagataggacaatgtctgctaagcagaatctcaacag 4507655
Query: 1148 aaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaac 1207
| ||||||||||| |||| ||||||||| ||||||||||| ||||| ||||| |||||||
Sbjct: 4507656 acccaagagcccaacgtagcacttggttaagacgatcagacagattgattggcgcagaac 4507715
Query: 1208 ccttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatct 1267
|||||||||| ||||| |||||||||| ||||| ||||||||||||||||| ||||| |
Sbjct: 4507716 ccttgaagcatggccgtggtggcatgcaatagattgatatccaacctcttgcgtgcattt 4507775
Query: 1268 tgaaaccagttaaaatatcttcagtaacagagccatatatcca 1310
| || ||||| | |||||| |||||||| || ||||| |||||
Sbjct: 4507776 taaatccagtcagaatatcctcagtaactgaaccatagatcca 4507818
Score = 250 bits (126), Expect = 4e-063
Identities = 192/214 (89%)
Strand = Plus / Plus
Query: 1786 atcaaagaagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatct 1845
|||||||||||| ||||| || || || |||||||| |||||||| || |||||||||||
Sbjct: 4508656 atcaaagaagactatgttgcgattagcgtatcgatcgtgcaagtcaatgccatcaaatct 4508715
Query: 1846 ttgtggaaactgaacatagcaagttttccttcctagtgctggatccatcatgaaacacat 1905
|||||| ||||||||||| |||||||||||||||||||| |||||||||||||| |||||
Sbjct: 4508716 ttgtgggaactgaacataacaagttttccttcctagtgcgggatccatcatgaagcacat 4508775
Query: 1906 agcctctctaagagctttgctgctattgaagtagtgatcacaatccacattaagaagata 1965
|| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 4508776 tgcttctctaagagctttgctactgttgaagtagtgatcacaatccacattgagaagata 4508835
Query: 1966 agcaccattcgtcaggacagctgatacgcgaatc 1999
|||||||| ||||| ||||| ||||| ||||||
Sbjct: 4508836 ggcaccatttgtcagcacagcagatacacgaatc 4508869
Score = 226 bits (114), Expect = 5e-056
Identities = 225/262 (85%)
Strand = Plus / Plus
Query: 1524 aaccttcaaatccctcttctatatcttccatgttgaagatgggagccgaagattctgttc 1583
||||||||| ||||||||||||||||||||||| ||||| ||||| ||||| |||||||
Sbjct: 4508321 aaccttcaatgccctcttctatatcttccatgttaaagataggagctgaagactctgttc 4508380
Query: 1584 tcttcatatcacggtttttggaatcaatatagctcttgtccttcttttttcttccgccac 1643
||||||| |||||||||| ||| || ||||||||| ||| || ||||| || ||||
Sbjct: 4508381 tcttcatcatacggtttttgctatccatgtagctcttgctctttttctttctgccaccac 4508440
Query: 1644 agcaacttttaatgataatgttaggctccaaatcagcttctgtcaatacaggatcatagc 1703
|||| || |||| | ||||||||| ||||||||||| || || | ||||||||||||||
Sbjct: 4508441 agcagctcttaacaacaatgttaggttccaaatcagcctcagttagtacaggatcatagc 4508500
Query: 1704 catacaaggcctgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgc 1763
|||||||||||||||||||||| ||||| ||||||||||||||||| || || |||||||
Sbjct: 4508501 catacaaggcctgcctattgaagcagcaacctgttcccacataaactggaccctgaatgc 4508560
Query: 1764 catctagacccttcatattaat 1785
|||||| ||| ||||| |||||
Sbjct: 4508561 catctaaacctttcatgttaat 4508582
Score = 176 bits (89), Expect = 4e-041
Identities = 211/249 (84%), Gaps = 2/249 (0%)
Strand = Plus / Plus
Query: 2609 ctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttgggaactga 2668
||||||||||| || || ||||| ||||||||||| || || |||||||||||||| |||
Sbjct: 4509822 ctcaatgcaagcctgtcaaggtatgtttcacggtttatcgggtaccactttgggaattga 4509881
Query: 2669 tctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagccacaaccca 2728
||||| ||||| || || |||||||||| |||||| ||||||||||| |||||||| |||
Sbjct: 4509882 tctaggagccaggataaggcaaaccaaatttcacagataacagatactagccacaatcca 4509941
Query: 2729 taagcatcttccactggatgagttatacgatattgaaagaagaaacat-aggatgataag 2787
|||||||| |||||||||||| | ||||||||| |||||| ||||| |||||||||||
Sbjct: 4509942 taagcatcccgcactggatgagtgacacgatattggaagaag-aacatcaggatgataag 4510000
Query: 2788 ccggagaacaatcacgatccgataaaggttaagctcgtttggagatatcggcactatgcg 2847
||||||| || || ||||| |||||||| |||| ||||| || || |||||||||||
Sbjct: 4510001 acggagaatgataacaatccggtaaaggttgagctggtttgaagggataggcactatgcg 4510060
Query: 2848 acttagagg 2856
|| |||||
Sbjct: 4510061 gctcagagg 4510069
Score = 157 bits (79), Expect = 4e-035
Identities = 109/119 (91%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaaca 2062
|||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||
Sbjct: 4508950 gcattcattgcaccagccttcttgtgatgctggaatcctggcctcttttcacgagagacg 4509009
Query: 2063 taaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaa 2121
|| ||||||||||||||||| || ||||| |||||||||||||||||||| ||||||||
Sbjct: 4509010 tagacaagccgtggcaactcgttaccatcagtgtcaagcccaccactgtgccccaagaa 4509068
Score = 131 bits (66), Expect = 2e-027
Identities = 118/136 (86%)
Strand = Plus / Plus
Query: 2129 atcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatggtc 2188
||||| || || ||||| || ||||||||||||||||| | |||||||||||||||||||
Sbjct: 4509163 atcatgccagggtgatcccttgggttattcccaggccaagcagtgccatcagccatggtc 4509222
Query: 2189 cagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactttgaac 2248
|| ||||| ||||||| |||||| || || |||||||| |||| ||||||||| |||||
Sbjct: 4509223 cacccctcttcaggtactttttgtgccttcgcaacaagagcattgatccgtaccttgaat 4509282
Query: 2249 tcttcatactccctct 2264
||||||||||| ||||
Sbjct: 4509283 tcttcatactctctct 4509298
Score = 79.8 bits (40), Expect = 8e-012
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 1441 ggtggatgcaataaaaattggagactggccaaagcgtttctccaagctcttctgagacat 1500
|||||| |||||||||||||| || || ||||| |||||||| || |||||||| |||||
Sbjct: 4508078 ggtggacgcaataaaaattggcgattgaccaaaacgtttctctaatctcttctgggacat 4508137
Query: 1501 aagcagtgacctttcatcctcgtaacct 1528
|||| |||||||||||| || ||||||
Sbjct: 4508138 cagcactgacctttcatcttcataacct 4508165
>gb|AU032126.1|AU032126 AU032126 Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R3596_1A, mRNA sequence
Length = 430
Score = 307 bits (155), Expect = 2e-080
Identities = 299/347 (86%)
Strand = Plus / Minus
Query: 715 agctcagcaaaatcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcg 774
||||||||||| |||||||| ||||||| |||||||| || || |||||||| || ||
Sbjct: 351 agctcagcaaagtcaccatcctcatcggacgcctttgaggtaacagtgaagttggtatca 292
Query: 775 atccctgctagcacttttaagagaccttggaacacagcaaagagatgtgcagaggtgcca 834
|| ||||||| |||||| | ||||| ||||||||||| |||||||| ||||| ||||||
Sbjct: 291 attcctgctaacactttcagaagaccctggaacacagcgaagagatgggcagatgtgcca 232
Query: 835 ccaatgacccaaaactgctcatttctccaccaatcctcaatgccaacaccactccatcga 894
||||||||||| ||||| |||||||||||||| ||||| || |||||||||||||||||
Sbjct: 231 ccaatgacccagaactgttcatttctccaccagtcctcgataccaacaccactccatcgg 172
Query: 895 agctccaaaataccagtggcgaagatagaagcaaaaagcaggatgaagaacgccccagca 954
||||||| ||||||||| ||||| || || || |||||||| || |||||| |||||||
Sbjct: 171 agctccagaataccagttgcgaaaatggaggcgaaaagcagaataaagaacatcccagca 112
Query: 955 taattgctaatcgcaggaataataaatttgttggtgagtaaacagatagcaggaaggacg 1014
|||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||| ||
Sbjct: 111 taattgctaatctcaggaatgataaatttgttggtgaggagacagatagcaggaagcaca 52
Query: 1015 cagtatgctactagtgggatagatgtaattggataaacaatggtgtt 1061
|| || || | ||||| || ||||||||||||||||||||||||||
Sbjct: 51 caataggcgataagtggaatggatgtaattggataaacaatggtgtt 5
>gb|D40691.1|D40691 RICS2805A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 335
Score = 299 bits (151), Expect = 4e-078
Identities = 292/335 (87%), Gaps = 3/335 (0%)
Strand = Plus / Minus
Query: 2272 ccgcctttc-tttcacaaaagaaggttgtattttgtccttt-aggtaatctatctttcga 2329
||||||||| ||| ||||| |||||||| ||||||||| || ||||||||||| ||| ||
Sbjct: 335 ccgcctttcctttaacaaaggaaggttggattttgtcccttcaggtaatctattttttga 276
Query: 2330 gcaaagtaaaactctggagc-cctaggttcaatgttgtgtttcttgcaaaagggaaccca 2388
|||||||||||||||||||| || |||||||| ||||| ||||||||||| ||||||||
Sbjct: 275 gcaaagtaaaactctggagctccgtggttcaatattgtgcttcttgcaaaacggaaccca 216
Query: 2389 tttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtc 2448
||||| ||||| ||||| ||||| || ||||| |||||||| |||||||||||||| ||
Sbjct: 215 cttcctagcaaattctgcagtttctgacagagcctcaaaagttaacatagctgaaccatc 156
Query: 2449 atcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggacaggac 2508
||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| ||
Sbjct: 155 gtcagaaacatagcatgacactttgtcaacagggtaatccacagccagaatggacaaaac 96
Query: 2509 agtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaagacatc 2568
|||||| | || || |||||||||||||| ||||||||||| ||||| |||||||||||
Sbjct: 95 agtgtttgctgtgatcagaggaggttcctttagtggatccaccgtactgacaaagacatc 36
Query: 2569 gattggagccaactgggatggctcaccctccctat 2603
|| ||||| | ||| |||||||| ||||||||||
Sbjct: 35 aatgggagcaagctgtgatggctctccctccctat 1
>gb|D24862.1|D24862 RICR2668A Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R2668_1A, mRNA sequence
Length = 349
Score = 297 bits (150), Expect = 2e-077
Identities = 273/314 (86%)
Strand = Plus / Minus
Query: 697 gtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcctttgatgtg 756
|||||||||||||| || ||||||||||| |||||||| ||||||| |||||||| ||
Sbjct: 349 gtccacttgaacacgtatagctcagcaaagtcaccatcctcatcggacgcctttgaggta 290
Query: 757 accgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaacacagcaaag 816
|| |||||||| || || || ||||||| |||||| | ||||| ||||||||||| |||
Sbjct: 289 acagtgaagttggtatcaattcctgctaacactttcagaagaccctggaacacagcgaag 230
Query: 817 agatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaatcctcaatg 876
||||| ||||| ||||||||||||||||| ||||| |||||||||||||| ||||| ||
Sbjct: 229 agatgggcagatgtgccaccaatgacccagaactgttcatttctccaccagtcctcgata 170
Query: 877 ccaacaccactccatcgaagctccaaaataccagtggcgaagatagaagcaaaaagcagg 936
||||||||||||||||| ||||||| ||||||||| ||||| || || || ||||||||
Sbjct: 169 ccaacaccactccatcggagctccagaataccagttgcgaaaatggaggcgaaaagcaga 110
Query: 937 atgaagaacgccccagcataattgctaatcgcaggaataataaatttgttggtgagtaaa 996
|| |||||| ||||||||||||||||||| ||||||| ||||||||||||||||| | |
Sbjct: 109 ataaagaacatcccagcataattgctaatctcaggaatgataaatttgttggtgaggaga 50
Query: 997 cagatagcaggaag 1010
||||||||||||||
Sbjct: 49 cagatagcaggaag 36
>gb|D47821.1|D47821 RICS13532A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 463
Score = 264 bits (133), Expect = 2e-067
Identities = 366/442 (82%), Gaps = 13/442 (2%)
Strand = Plus / Minus
Query: 1180 cgatcagaaagattaattggagcagaacccttgaagcaaggccgaagtggcatgcagtag 1239
|||||||| ||||| ||||| ||||||||||||||||| ||||| |||||||||| |||
Sbjct: 438 cgatcagacagattgattggcgcagaacccttgaagcatggccgtggtggcatgcaatag 379
Query: 1240 atggatatccaacctcttgcatgcatcttgaaaccagttaaaatatcttcagtaacagag 1299
|| |||||||||| |||||| ||||| || || ||||| | |||||| |||||||| ||
Sbjct: 378 attgatatccaacntcttgcgtgcattttaaatccagtcagaatatcctcagtaactgaa 319
Query: 1300 ccatatatccatccgatctctttcccccattctgttttatcctcatatnnccacnaaact 1359
||||| ||||| || |||||||| |||||||| ||||| ||||||||| |||| ||||
Sbjct: 318 ccatagatccagccaatctcttttccccattcagttttgtcctcatat--ccac--aact 263
Query: 1360 aatgnacatgtatagcttcctttagcagggaacctgggtttgttgaagggggtatgccac 1419
|| ||||| || |||||||| || || || ||||||| ||||| || |||||||| |
Sbjct: 262 gat-aacatggatggcttccttcagtagagatgctgggttcgttgagggtggtatgcctc 204
Query: 1420 cttgagtcataaaannaanggggtggatgcaataaaaattggagactggccaaagcgttt 1479
|||||||||| || |||||| |||||||||||||| || || ||||| |||||
Sbjct: 203 cttgagtcatgaa--------ggtggacgcaataaaaattggcgattgaccaaaacgttt 152
Query: 1480 ctccaagctcttctgagacataagcagtgacctttcatcctcgtaaccttcaaatccctc 1539
||| || |||||||| ||||| |||| |||||||||||| || |||||||||| |||||
Sbjct: 151 ctctaatctcttctgggacatcagcactgacctttcatcttcataaccttcaatgccctc 92
Query: 1540 ttctatatcttccatgttgaagatgggagccgaagattctgttctcttcatatcacggtt 1599
|||||||||||||||||| ||||| ||||| ||||| |||||||||||||| ||||||
Sbjct: 91 ttctatatcttccatgttaaagataggagctgaagactctgttctcttcatcatacggtt 32
Query: 1600 tttggaatcaatatagctcttg 1621
|||| ||| || |||||||||
Sbjct: 31 tttgctatccatgtagctcttg 10
>gb|D24860.1|D24860 RICR2666A Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R2666_1A, mRNA sequence
Length = 323
Score = 262 bits (132), Expect = 1e-066
Identities = 246/284 (86%)
Strand = Plus / Minus
Query: 727 tcaccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagc 786
|||||||| ||||||| |||||||| || || |||||||| || || || ||||||| |
Sbjct: 319 tcaccatcctcatcggacgcctttgaggtaacagtgaagttggtatcaattcctgctaac 260
Query: 787 acttttaagagaccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaa 846
||||| | ||||| ||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct: 259 actttcagaagaccctggaacacagcgaagagatgggcagatgtgccaccaatgacccag 200
Query: 847 aactgctcatttctccaccaatcctcaatgccaacaccactccatcgaagctccaaaata 906
||||| |||||||||||||| ||||| || ||||||||||||||||| ||||||| ||||
Sbjct: 199 aactgttcatttctccaccagtcctcgataccaacaccactccatcggagctccagaata 140
Query: 907 ccagtggcgaagatagaagcaaaaagcaggatgaagaacgccccagcataattgctaatc 966
||||| ||||| || || || |||||||| || |||||| |||||||||||||||||||
Sbjct: 139 ccagttgcgaaaatggaggcgaaaagcagaataaagaacatcccagcataattgctaatc 80
Query: 967 gcaggaataataaatttgttggtgagtaaacagatagcaggaag 1010
||||||| ||||||||||||||||| | |||||||||||||||
Sbjct: 79 tcaggaatgataaatttgttggtgaggagacagatagcaggaag 36
>gb|D24381.1|D24381 RICR1814A Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R1814_1A, mRNA sequence
Length = 394
Score = 194 bits (98), Expect = 2e-046
Identities = 294/362 (81%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||| || |||||||| |||||||| || ||||| || || || || |||| |||||
Sbjct: 373 atgaaaggatcgatcttgacccacagaagggagaagatcgacgcgagnaggatcgaccag 314
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
|| |||||||||||||| |||||||||||| | |||||||||||||| ||||| ||||||
Sbjct: 313 acgatgacgatggtcggagtgcggttctgcctgcccatgagacccttgaggaaggggtag 254
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattgg 609
|| ||||||||||||||||| | ||||| ||||| || || || |||||||||||||||
Sbjct: 253 agatggaggatcacccagatggagaagaagagctttccaaagagaggaccccatgattgg 194
Query: 610 tagccactgttgatagcatacgacactccagccactataccaaccaggttaatcacaagc 669
|| || ||||| || ||||| || | || ||||| || || |||||||| || ||||||
Sbjct: 193 taaccgctgttaatggcatatgatatacccgccaccatgcccaccaggttgatgacaagc 134
Query: 670 acagtggtnnnnnnnatcagaagagttgtccacttgaacacatacagctcagcaaaatca 729
|| ||||| || || ||| | |||||||||||||| || ||||||||||| |||
Sbjct: 133 acggtggtcgggggaatgaggagactggtccacttgaacacgtatagctcagcaaagtca 74
Query: 730 ccatcatcatcggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcact 789
||||| ||||||| |||||||| || || |||||||| || || || ||||||| ||||
Sbjct: 73 ccatcctcatcggacgcctttgaggtaacagtgaagttggtatcaattcctgctaacact 14
Query: 790 tt 791
||
Sbjct: 13 tt 12
>gb|CB641167.1|CB641167 OSJNEa18C01.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa18C01 5', mRNA sequence
Length = 507
Score = 165 bits (83), Expect = 2e-037
Identities = 245/299 (81%)
Strand = Plus / Minus
Query: 2423 tcaaaagtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacaggg 2482
|||||||||| ||| || | ||| || ||||| ||||| || || || ||||| || |||
Sbjct: 439 tcaaaagtcagcattgcagcaccatcgtcagatacatagcaagagaccttgtccactggg 380
Query: 2483 taatccacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagt 2542
||||| ||||||||||||||||| || || ||| |||||| |||||||||||||| |
Sbjct: 379 taatcaacagcaagaatggacagcacggtattggcagtaacaagaggaggttccttcatg 320
Query: 2543 ggatccactgtactaacaaagacatcgattggagccaactgggatggctcaccctcccta 2602
|| || |||||||| ||||| | || | | ||||||||| ||||||||||| || ||
Sbjct: 319 gggtcgactgtactgacaaaaatgtcaacagcagccaactgagatggctcaccttctctg 260
Query: 2603 tcatatctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttggg 2662
||||| |||||||| || ||||| ||||| |||||||||||||| ||| ||||||| |||
Sbjct: 259 tcatacctcaatgccagcctatcaaggtaggtttcacggttgattggaaaccacttcggg 200
Query: 2663 aactgatctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagcca 2721
|||||||| | | ||| |||||||||||||||| ||||| |||||||||| ||||||
Sbjct: 199 aactgatccaatatccaggacaaagcaaaccaaatctcacatataacagataaaagcca 141
>gb|CB641197.1|CB641197 OSJNEa18D17.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa18D17 5', mRNA sequence
Length = 567
Score = 165 bits (83), Expect = 2e-037
Identities = 245/299 (81%)
Strand = Plus / Minus
Query: 2423 tcaaaagtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacaggg 2482
|||||||||| ||| || | ||| || ||||| ||||| || || || ||||| || |||
Sbjct: 439 tcaaaagtcagcattgcagcaccatcgtcagatacatagcaagagaccttgtccactggg 380
Query: 2483 taatccacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagt 2542
||||| ||||||||||||||||| || || ||| |||||| |||||||||||||| |
Sbjct: 379 taatcaacagcaagaatggacagcacggtattggcagtaacaagaggaggttccttcatg 320
Query: 2543 ggatccactgtactaacaaagacatcgattggagccaactgggatggctcaccctcccta 2602
|| || |||||||| ||||| | || | | ||||||||| ||||||||||| || ||
Sbjct: 319 gggtcgactgtactgacaaaaatgtcaacagcagccaactgagatggctcaccttctctg 260
Query: 2603 tcatatctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttggg 2662
||||| |||||||| || ||||| ||||| |||||||||||||| ||| ||||||| |||
Sbjct: 259 tcatacctcaatgccagcctatcaaggtaggtttcacggttgattggaaaccacttcggg 200
Query: 2663 aactgatctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagcca 2721
|||||||| | | ||| |||||||||||||||| ||||| |||||||||| ||||||
Sbjct: 199 aactgatccaatatccaggacaaagcaaaccaaatctcacatataacagataaaagcca 141
>dbj|AK072356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023059I02, full
insert sequence
Length = 3954
Score = 165 bits (83), Expect = 2e-037
Identities = 245/299 (81%)
Strand = Plus / Minus
Query: 2423 tcaaaagtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacaggg 2482
|||||||||| ||| || | ||| || ||||| ||||| || || || ||||| || |||
Sbjct: 1647 tcaaaagtcagcattgcagcaccatcgtcagatacatagcaagagaccttgtccactggg 1588
Query: 2483 taatccacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagt 2542
||||| ||||||||||||||||| || || ||| |||||| |||||||||||||| |
Sbjct: 1587 taatcaacagcaagaatggacagcacggtattggcagtaacaagaggaggttccttcatg 1528
Query: 2543 ggatccactgtactaacaaagacatcgattggagccaactgggatggctcaccctcccta 2602
|| || |||||||| ||||| | || | | ||||||||| ||||||||||| || ||
Sbjct: 1527 gggtcgactgtactgacaaaaatgtcaacagcagccaactgagatggctcaccttctctg 1468
Query: 2603 tcatatctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttggg 2662
||||| |||||||| || ||||| ||||| |||||||||||||| ||| ||||||| |||
Sbjct: 1467 tcatacctcaatgccagcctatcaaggtaggtttcacggttgattggaaaccacttcggg 1408
Query: 2663 aactgatctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagcca 2721
|||||||| | | ||| |||||||||||||||| ||||| |||||||||| ||||||
Sbjct: 1407 aactgatccaatatccaggacaaagcaaaccaaatctcacatataacagataaaagcca 1349
Score = 157 bits (79), Expect = 4e-035
Identities = 419/533 (78%)
Strand = Plus / Minus
Query: 1736 gttcccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaag 1795
|||||||||||||| |||||||| |||||||| |||||| ||| |||||||| || ||
Sbjct: 2334 gttcccacataaactggtccttggatgccatcaagacccctcaagttaatatcgaaaaac 2275
Query: 1796 acaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaac 1855
||| |||||| ||| ||||||||||||| | || |||||||| || |||||||| |||
Sbjct: 2274 acagtgttcctgttcgcatatcgatcattcctatcaataccatcgaacctttgtgggaac 2215
Query: 1856 tgaacatagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctcta 1915
|||||||| || |||||||||| ||||||||| | ||| |||||||| || |
Sbjct: 2214 tgaacataacagacactccttcctaggtttggatccataaggaagcacatagcttcccgc 2155
Query: 1916 agagctttgctgctattgaagtagtgatcacaatccacattaagaagataagcaccattc 1975
||||| |||||| | |||| ||||||||||||||| | ||| | | || |||||
Sbjct: 2154 agagccttgctgttgttgatgtagtgatcacaatcaagattcaacatgtactgtccattg 2095
Query: 1976 gtcaggacagctgatacgcgaatcaaagcattcatggcaccagccttcttgtggtgctgg 2035
|| || |||||||| || |||| | |||||||||||||||||||||||||||||||||
Sbjct: 2094 gtaagcacagctgagacacgaacaagagcattcatggcaccagccttcttgtggtgctga 2035
Query: 2036 aagcctggcctcttttcacgagaaacataaacaagccgtggcaactcattcccatccgtg 2095
|| || || | ||| |||||||| || || || || || || | |||||| || || ||
Sbjct: 2034 aacccaggacgcttctcacgagatacgtagaccaggcggggaagctcattaccctcggta 1975
Query: 2096 tcaagcccaccactgtggcccaagaatacttggatcattccnggatgatctctagggtta 2155
||||| ||||||||||| || | ||| || || |||||||| ||||| || |||| ||
Sbjct: 1974 tcaaggccaccactgtgaccaaggaaaacctgaatcattccaggatggtccctagtattg 1915
Query: 2156 ttcccaggccanggagtgccatcagccatggtccagccctcctcaggtattttttgcgct 2215
|| || ||||| || |||||||| |||| |||| |||||||| || | ||| || ||
Sbjct: 1914 tttcctggccatggtgtgccatcttgcatgatccatccctcctccgggactttctgtgcc 1855
Query: 2216 tttgcaacaagggcatcgatccgtactttgaactcttcatactccctcttcat 2268
|| ||||||||| ||| |||| |||||||| |||||||| || ||||||||
Sbjct: 1854 ttagcaacaaggccatttatcctaactttgaattcttcatattctctcttcat 1802
Score = 117 bits (59), Expect = 3e-023
Identities = 167/203 (82%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||| |||||||||||||||| || ||||||||||| || ||||| ||||| | |||
Sbjct: 3375 agaagcgttgtccacttgaacatgtagagctcagcaaagtcgccatcttcatcagaagcc 3316
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
||||| ||||| ||||| || |||||||| || || ||||| || | |||||| |||||
Sbjct: 3315 tttgaggtgacagtgaaattggtgtcgataccagcaagcaccttgaggagaccctggaag 3256
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|| ||||| ||||| ||||| | || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 3255 acggcaaaaagatgcgcagatatacctccaataacccagaactgttcattcctccaccac 3196
Query: 868 tcctcaatgccaacaccactcca 890
|| || |||||||||||||||||
Sbjct: 3195 tcatcgatgccaacaccactcca 3173
Score = 103 bits (52), Expect = 5e-019
Identities = 145/176 (82%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || ||||| ||||||| | |||||||| |||||||||||
Sbjct: 3615 acccacagcaatgagaagatcgaagccagaaggattgcccaaacaacaacgatggtcgga 3556
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|||||||| ||| ||||| |||||||| ||||| ||||| | ||||| |||||||||
Sbjct: 3555 gtgcggttttgccgacccataagacccttgaggaaggggtacaagtggacaatcacccag 3496
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgat 623
| |||||||| ||||| || || || || ||||||||||||||||| ||||||||
Sbjct: 3495 aaggcaaagaagagcttgccaaagagcggtccccatgattggtagccgctgttgat 3440
Score = 95.6 bits (48), Expect = 1e-016
Identities = 171/212 (80%)
Strand = Plus / Minus
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||||||||| |||||||| ||||| || | ||||||||| |||||||| ||||||||
Sbjct: 2928 agaatttcaacagaaccaagtgcccaccgaagcacttggttaagacgatctgaaagattg 2869
Query: 1195 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaacct 1254
|| |||||||| |||||||| || || |||||||||||||| ||| |||| |||
Sbjct: 2868 ataggagcagaccccttgaaagctgggcgcttgggcatgcagtagattgatctccagcct 2809
Query: 1255 cttgcatgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccg 1314
| |||||||||||||| ||||| | ||||||||| || || || || || ||||| ||
Sbjct: 2808 cgcgcatgcatcttgaatccagtgagaatatcttctgtcacggaaccgtagatccaccca 2749
Query: 1315 atctctttcccccattctgttttatcctcata 1346
||||| | |||||||| || || ||||||||
Sbjct: 2748 atctcagttccccattcggtcttgtcctcata 2717
Score = 48.1 bits (24), Expect = 0.027
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 1462 agactggccaaagcgtttctccaagctcttctgagacataagcagtga 1509
|||||||||||| | |||||||||||| | ||||||||||| |||||
Sbjct: 2614 agactggccaaatctcttctccaagctcatttgagacataagaagtga 2567
Score = 40.1 bits (20), Expect = 6.5
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctcca 1081
||||| ||||| | |||||||| | ||||||||||||| || | ||||||||
Sbjct: 3033 gggatcgatgtcaatggataaatagtggtgttgatgtaggcaaatctctcca 2982
>ref|XM_477093.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3954
Score = 165 bits (83), Expect = 2e-037
Identities = 245/299 (81%)
Strand = Plus / Minus
Query: 2423 tcaaaagtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacaggg 2482
|||||||||| ||| || | ||| || ||||| ||||| || || || ||||| || |||
Sbjct: 1647 tcaaaagtcagcattgcagcaccatcgtcagatacatagcaagagaccttgtccactggg 1588
Query: 2483 taatccacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagt 2542
||||| ||||||||||||||||| || || ||| |||||| |||||||||||||| |
Sbjct: 1587 taatcaacagcaagaatggacagcacggtattggcagtaacaagaggaggttccttcatg 1528
Query: 2543 ggatccactgtactaacaaagacatcgattggagccaactgggatggctcaccctcccta 2602
|| || |||||||| ||||| | || | | ||||||||| ||||||||||| || ||
Sbjct: 1527 gggtcgactgtactgacaaaaatgtcaacagcagccaactgagatggctcaccttctctg 1468
Query: 2603 tcatatctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttggg 2662
||||| |||||||| || ||||| ||||| |||||||||||||| ||| ||||||| |||
Sbjct: 1467 tcatacctcaatgccagcctatcaaggtaggtttcacggttgattggaaaccacttcggg 1408
Query: 2663 aactgatctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagcca 2721
|||||||| | | ||| |||||||||||||||| ||||| |||||||||| ||||||
Sbjct: 1407 aactgatccaatatccaggacaaagcaaaccaaatctcacatataacagataaaagcca 1349
Score = 157 bits (79), Expect = 4e-035
Identities = 419/533 (78%)
Strand = Plus / Minus
Query: 1736 gttcccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaag 1795
|||||||||||||| |||||||| |||||||| |||||| ||| |||||||| || ||
Sbjct: 2334 gttcccacataaactggtccttggatgccatcaagacccctcaagttaatatcgaaaaac 2275
Query: 1796 acaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaac 1855
||| |||||| ||| ||||||||||||| | || |||||||| || |||||||| |||
Sbjct: 2274 acagtgttcctgttcgcatatcgatcattcctatcaataccatcgaacctttgtgggaac 2215
Query: 1856 tgaacatagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctcta 1915
|||||||| || |||||||||| ||||||||| | ||| |||||||| || |
Sbjct: 2214 tgaacataacagacactccttcctaggtttggatccataaggaagcacatagcttcccgc 2155
Query: 1916 agagctttgctgctattgaagtagtgatcacaatccacattaagaagataagcaccattc 1975
||||| |||||| | |||| ||||||||||||||| | ||| | | || |||||
Sbjct: 2154 agagccttgctgttgttgatgtagtgatcacaatcaagattcaacatgtactgtccattg 2095
Query: 1976 gtcaggacagctgatacgcgaatcaaagcattcatggcaccagccttcttgtggtgctgg 2035
|| || |||||||| || |||| | |||||||||||||||||||||||||||||||||
Sbjct: 2094 gtaagcacagctgagacacgaacaagagcattcatggcaccagccttcttgtggtgctga 2035
Query: 2036 aagcctggcctcttttcacgagaaacataaacaagccgtggcaactcattcccatccgtg 2095
|| || || | ||| |||||||| || || || || || || | |||||| || || ||
Sbjct: 2034 aacccaggacgcttctcacgagatacgtagaccaggcggggaagctcattaccctcggta 1975
Query: 2096 tcaagcccaccactgtggcccaagaatacttggatcattccnggatgatctctagggtta 2155
||||| ||||||||||| || | ||| || || |||||||| ||||| || |||| ||
Sbjct: 1974 tcaaggccaccactgtgaccaaggaaaacctgaatcattccaggatggtccctagtattg 1915
Query: 2156 ttcccaggccanggagtgccatcagccatggtccagccctcctcaggtattttttgcgct 2215
|| || ||||| || |||||||| |||| |||| |||||||| || | ||| || ||
Sbjct: 1914 tttcctggccatggtgtgccatcttgcatgatccatccctcctccgggactttctgtgcc 1855
Query: 2216 tttgcaacaagggcatcgatccgtactttgaactcttcatactccctcttcat 2268
|| ||||||||| ||| |||| |||||||| |||||||| || ||||||||
Sbjct: 1854 ttagcaacaaggccatttatcctaactttgaattcttcatattctctcttcat 1802
Score = 117 bits (59), Expect = 3e-023
Identities = 167/203 (82%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||| |||||||||||||||| || ||||||||||| || ||||| ||||| | |||
Sbjct: 3375 agaagcgttgtccacttgaacatgtagagctcagcaaagtcgccatcttcatcagaagcc 3316
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
||||| ||||| ||||| || |||||||| || || ||||| || | |||||| |||||
Sbjct: 3315 tttgaggtgacagtgaaattggtgtcgataccagcaagcaccttgaggagaccctggaag 3256
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|| ||||| ||||| ||||| | || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 3255 acggcaaaaagatgcgcagatatacctccaataacccagaactgttcattcctccaccac 3196
Query: 868 tcctcaatgccaacaccactcca 890
|| || |||||||||||||||||
Sbjct: 3195 tcatcgatgccaacaccactcca 3173
Score = 103 bits (52), Expect = 5e-019
Identities = 145/176 (82%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || ||||| ||||||| | |||||||| |||||||||||
Sbjct: 3615 acccacagcaatgagaagatcgaagccagaaggattgcccaaacaacaacgatggtcgga 3556
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|||||||| ||| ||||| |||||||| ||||| ||||| | ||||| |||||||||
Sbjct: 3555 gtgcggttttgccgacccataagacccttgaggaaggggtacaagtggacaatcacccag 3496
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgat 623
| |||||||| ||||| || || || || ||||||||||||||||| ||||||||
Sbjct: 3495 aaggcaaagaagagcttgccaaagagcggtccccatgattggtagccgctgttgat 3440
Score = 95.6 bits (48), Expect = 1e-016
Identities = 171/212 (80%)
Strand = Plus / Minus
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||||||||| |||||||| ||||| || | ||||||||| |||||||| ||||||||
Sbjct: 2928 agaatttcaacagaaccaagtgcccaccgaagcacttggttaagacgatctgaaagattg 2869
Query: 1195 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaacct 1254
|| |||||||| |||||||| || || |||||||||||||| ||| |||| |||
Sbjct: 2868 ataggagcagaccccttgaaagctgggcgcttgggcatgcagtagattgatctccagcct 2809
Query: 1255 cttgcatgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccg 1314
| |||||||||||||| ||||| | ||||||||| || || || || || ||||| ||
Sbjct: 2808 cgcgcatgcatcttgaatccagtgagaatatcttctgtcacggaaccgtagatccaccca 2749
Query: 1315 atctctttcccccattctgttttatcctcata 1346
||||| | |||||||| || || ||||||||
Sbjct: 2748 atctcagttccccattcggtcttgtcctcata 2717
Score = 48.1 bits (24), Expect = 0.027
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 1462 agactggccaaagcgtttctccaagctcttctgagacataagcagtga 1509
|||||||||||| | |||||||||||| | ||||||||||| |||||
Sbjct: 2614 agactggccaaatctcttctccaagctcatttgagacataagaagtga 2567
Score = 40.1 bits (20), Expect = 6.5
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctcca 1081
||||| ||||| | |||||||| | ||||||||||||| || | ||||||||
Sbjct: 3033 gggatcgatgtcaatggataaatagtggtgttgatgtaggcaaatctctcca 2982
>gb|D47732.1|D47732 RICS13393A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 459
Score = 161 bits (81), Expect = 3e-036
Identities = 156/181 (86%)
Strand = Plus / Minus
Query: 1441 ggtggatgcaataaaaattggagactggccaaagcgtttctccaagctcttctgagacat 1500
|||||| |||||||||||||| || || ||||| |||||||| || |||||||| |||||
Sbjct: 190 ggtggacgcaataaaaattggcgattgaccaaaacgtttctctaatctcttctgggacat 131
Query: 1501 aagcagtgacctttcatcctcgtaaccttcaaatccctcttctatatcttccatgttgaa 1560
|||| |||||||||||| || |||||||||| ||||||||||||||||||||||| ||
Sbjct: 130 cagcactgacctttcatcttcataaccttcaatgccctcttctatatcttccatgttaaa 71
Query: 1561 gatgggagccgaagattctgttctcttcatatcacggtttttggaatcaatatagctctt 1620
||| ||||| ||||| |||||||||||||| |||||||||| ||| || ||||||||
Sbjct: 70 gataggagctgaagactctgttctcttcatcatacggtttttgctatccatgtagctctt 11
Query: 1621 g 1621
|
Sbjct: 10 g 10
>gb|CB636280.1|CB636280 OSJNEa01J02.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa01J02 3', mRNA sequence
Length = 611
Score = 141 bits (71), Expect = 2e-030
Identities = 152/179 (84%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || || ||||| |||| || |||||||| || |||||||||
Sbjct: 337 acccacagcaaggagaagatcgatgcaaggaggatggcccaaacaacaacaatggtcggt 396
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||||||| |||||||||||||| ||||| ||||| ||||||| |||||||||
Sbjct: 397 gtacggttctgccgacccatgagacccttaaggaaggggtacaggtggacaatcacccag 456
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagc 626
| |||||||| |||||||| || || ||||||||||| ||||||||||||||||||||
Sbjct: 457 aaggcaaagaagagcttcccaaagagcggaccccatgactggtagccactgttgatagc 515
>dbj|AK061688.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B05, full
insert sequence
Length = 1582
Score = 141 bits (71), Expect = 2e-030
Identities = 152/179 (84%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || || ||||| |||| || |||||||| || |||||||||
Sbjct: 1094 acccacagcaaggagaagatcgatgcaaggaggatggcccaaacaacaacaatggtcggt 1035
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||||||| |||||||||||||| ||||| ||||| ||||||| |||||||||
Sbjct: 1034 gtacggttctgccgacccatgagacccttaaggaaggggtacaggtggacaatcacccag 975
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagc 626
| |||||||| |||||||| || || ||||||||||| ||||||||||||||||||||
Sbjct: 974 aaggcaaagaagagcttcccaaagagcggaccccatgactggtagccactgttgatagc 916
Score = 137 bits (69), Expect = 4e-029
Identities = 237/293 (80%)
Strand = Plus / Minus
Query: 1027 agtgggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagc 1086
||||| || ||||| | |||||||| | ||||||||||||| || | ||||||||| | |
Sbjct: 515 agtggaatcgatgtgagtggataaatagtggtgttgatgtaagcaaatctctccaggaac 456
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|| |||| ||| ||| |||||||| || ||||| || ||||||| |||||||| ||
Sbjct: 455 ttaagccgtcctccgtacccataccatatgggacaatgcctgctaaaaagaatttccaca 396
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
|||||||||||||| || | ||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 395 gaaccaagagcccaccgaagcacctggttcagacgatccgaaagattaattggggcagac 336
Query: 1207 cccttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatc 1266
|||||||| || || |||||||||||||| || ||| || | ||||||||||
Sbjct: 335 cccttgaatgctggtcgcttaggcatgcagtagattgaccgccagccacgtgcatgcatc 276
Query: 1267 ttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
||||| ||||| | ||||||||| |||||||| ||||| |||||||| |||||
Sbjct: 275 ttgaatccagtgagaatatcttctgtaacagaaccatagatccatccaatctc 223
Score = 99.6 bits (50), Expect = 8e-018
Identities = 167/206 (81%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||||||||||| || |||||||| ||||| || || ||||| |
Sbjct: 857 atcagaagggttgtccacttgaacatgtagagctcagcgaaatcgccttcttcatcagag 798
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|||||||| ||||| |||||| | || || || || || ||||| || | ||||| |||
Sbjct: 797 gcctttgaggtgacagtgaagctggtatcaattccagcaagcaccttcagcagaccctgg 738
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|| || ||||| ||||| || || | || ||||| ||||||||||||||||| ||||||
Sbjct: 737 aagaccgcaaatagatgagcggaaatacctccaataacccaaaactgctcattcctccac 678
Query: 865 caatcctcaatgccaacaccactcca 890
|| || || |||||||||||||||||
Sbjct: 677 cattcatcgatgccaacaccactcca 652
>dbj|AK069196.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003G18, full
insert sequence
Length = 4282
Score = 141 bits (71), Expect = 2e-030
Identities = 152/179 (84%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || || ||||| |||| || |||||||| || |||||||||
Sbjct: 3429 acccacagcaaggagaagatcgatgcaaggaggatggcccaaacaacaacaatggtcggt 3370
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||||||| |||||||||||||| ||||| ||||| ||||||| |||||||||
Sbjct: 3369 gtacggttctgccgacccatgagacccttaaggaaggggtacaggtggacaatcacccag 3310
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagc 626
| |||||||| |||||||| || || ||||||||||| ||||||||||||||||||||
Sbjct: 3309 aaggcaaagaagagcttcccaaagagcggaccccatgactggtagccactgttgatagc 3251
Score = 141 bits (71), Expect = 2e-030
Identities = 629/813 (77%), Gaps = 2/813 (0%)
Strand = Plus / Minus
Query: 1885 tggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatc 1944
||||||||| | ||| ||||||||||||| ||||||||||| | |||| |||||||||
Sbjct: 2002 tggatccataaggaagcacatagcctctcggagagctttgctattgttgatgtagtgatc 1943
Query: 1945 acaatccacatt-aagaagataagcaccattcgtcaggacagctgatacgcgaatcaaag 2003
||| || | ||| || ||| || ||||| || |||||||||||||| |||| | |
Sbjct: 1942 acagtcaagattcaacaag-tattgtccattagtaaggacagctgatacacgaacaagtg 1884
Query: 2004 cattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacat 2063
||||||| ||||||||||| || ||||| ||||| || || | || |||||||| ||||
Sbjct: 1883 cattcatagcaccagcctttttatggtgttggaatccaggacgtttctcacgagacacat 1824
Query: 2064 aaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaata 2123
| || | || || | |||||| || || || ||||| || ||||| || || | ||| |
Sbjct: 1823 agactaaacgaggaagctcattgccttcggtatcaaggcctccactatgaccaaggaaaa 1764
Query: 2124 cttggatcattccnggatgatctctagggttattcccaggccanggagtgccatcagcca 2183
| || |||||||| ||||| ||||| | || || |||||||| || |||||||| ||
Sbjct: 1763 cctgaatcattccaggatggtctctggtattgttaccaggccaaggtgtgccatcttgca 1704
Query: 2184 tggtccagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactt 2243
| |||| || |||||||| | ||| || || || || || || |||| | || ||||
Sbjct: 1703 taatccatccttcctcaggaactttctgtgccttggcgacgagagcattaacacgaactt 1644
Query: 2244 tgaactcttcatactccctcttcatagcccgcctttctttcacaaaagaaggttgtattt 2303
| || |||||||| ||||||||||| || || | ||||| |||||||||| || | ||
Sbjct: 1643 taaattcttcatattccctcttcatggcacgacgatctttaacaaaagaagcctgaactt 1584
Query: 2304 tgtcctttaggtaatctatctttcgagcaaagtaaaactctggagccctaggttcaatgt 2363
|||| || | |||||| || || | |||||||| |||||||||| || ||||| |||
Sbjct: 1583 tgtctttcaagtaatcaattttctgtgcaaagtaccactctggagctctgggttctatgc 1524
Query: 2364 tgtgtttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagctt 2423
||| || || || || || |||||||| || ||||| |||| || |||| || || |
Sbjct: 1523 tgtactttttacagaacggtacccattttctagcaaattctgaagtctcagcaagcgcat 1464
Query: 2424 caaaagtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggt 2483
|||| || ||||| || | || |||||||| ||||| || ||||| || ||||||||||
Sbjct: 1463 caaatgttaacattgcagctccatcatcagacacatagcaagataccttatcaacagggt 1404
Query: 2484 aatccacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtg 2543
||||||||||||| ||||| || ||||| ||| |||| | ||||||||||| || | |
Sbjct: 1403 aatccacagcaaggatggagagcacagtattggcagtgacaagaggaggttctttcatag 1344
Query: 2544 gatccactgtactaacaaagacatcgattggagccaactgggatggctcaccctccctat 2603
||||||| ||||| ||||| | || | |||||||| || ||||| ||||| |||| |
Sbjct: 1343 gatccacagtactgacaaaaatgtcaacaggagccaattgagatggttcaccttcccggt 1284
Query: 2604 catatctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttggga 2663
|||| || || || || ||||| |||||||||||||||||||| || ||||||| ||||
Sbjct: 1283 cataccttaaagccagcctatccaggtaagtttcacggttgattggggaccacttgggga 1224
Query: 2664 actgatctagaagccaagacaaagcaaaccaaa 2696
||||||| |||| ||| || | |||||||||||
Sbjct: 1223 actgatccagaatccaggatagagcaaaccaaa 1191
Score = 137 bits (69), Expect = 4e-029
Identities = 237/293 (80%)
Strand = Plus / Minus
Query: 1027 agtgggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagc 1086
||||| || ||||| | |||||||| | ||||||||||||| || | ||||||||| | |
Sbjct: 2850 agtggaatcgatgtgagtggataaatagtggtgttgatgtaagcaaatctctccaggaac 2791
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|| |||| ||| ||| |||||||| || ||||| || ||||||| |||||||| ||
Sbjct: 2790 ttaagccgtcctccgtacccataccatatgggacaatgcctgctaaaaagaatttccaca 2731
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
|||||||||||||| || | ||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 2730 gaaccaagagcccaccgaagcacctggttcagacgatccgaaagattaattggggcagac 2671
Query: 1207 cccttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatc 1266
|||||||| || || |||||||||||||| || ||| || | ||||||||||
Sbjct: 2670 cccttgaatgctggtcgcttaggcatgcagtagattgaccgccagccacgtgcatgcatc 2611
Query: 1267 ttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
||||| ||||| | ||||||||| |||||||| ||||| |||||||| |||||
Sbjct: 2610 ttgaatccagtgagaatatcttctgtaacagaaccatagatccatccaatctc 2558
Score = 99.6 bits (50), Expect = 8e-018
Identities = 167/206 (81%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||||||||||| || |||||||| ||||| || || ||||| |
Sbjct: 3192 atcagaagggttgtccacttgaacatgtagagctcagcgaaatcgccttcttcatcagag 3133
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|||||||| ||||| |||||| | || || || || || ||||| || | ||||| |||
Sbjct: 3132 gcctttgaggtgacagtgaagctggtatcaattccagcaagcaccttcagcagaccctgg 3073
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|| || ||||| ||||| || || | || ||||| ||||||||||||||||| ||||||
Sbjct: 3072 aagaccgcaaatagatgagcggaaatacctccaataacccaaaactgctcattcctccac 3013
Query: 865 caatcctcaatgccaacaccactcca 890
|| || || |||||||||||||||||
Sbjct: 3012 cattcatcgatgccaacaccactcca 2987
Score = 63.9 bits (32), Expect = 5e-007
Identities = 74/88 (84%)
Strand = Plus / Minus
Query: 1736 gttcccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaag 1795
|||||||||||||| |||||||| | ||||| ||||| ||| ||||||||| || ||
Sbjct: 2151 gttcccacataaactggtccttggagaccatcgagacctctcaaattaatatcgaaaaac 2092
Query: 1796 acaatgttccggtttgcatatcgatcat 1823
|| |||||| |||||||||||||||||
Sbjct: 2091 acggtgttcctgtttgcatatcgatcat 2064
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete
sequence
Length = 154555
Score = 141 bits (71), Expect = 2e-030
Identities = 152/179 (84%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || || ||||| |||| || |||||||| || |||||||||
Sbjct: 21169 acccacagcaaggagaagatcgatgcaaggaggatggcccaaacaacaacaatggtcggt 21110
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||||||| |||||||||||||| ||||| ||||| ||||||| |||||||||
Sbjct: 21109 gtacggttctgccgacccatgagacccttaaggaaggggtacaggtggacaatcacccag 21050
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagc 626
| |||||||| |||||||| || || ||||||||||| ||||||||||||||||||||
Sbjct: 21049 aaggcaaagaagagcttcccaaagagcggaccccatgactggtagccactgttgatagc 20991
Score = 135 bits (68), Expect = 1e-028
Identities = 236/292 (80%)
Strand = Plus / Minus
Query: 1027 agtgggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagc 1086
||||| || ||||| | |||||||| | ||||||||||||| || | ||||||||| | |
Sbjct: 20508 agtggaatcgatgtgagtggataaatagtggtgttgatgtaagcaaatctctccaggaac 20449
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|| |||| ||| ||| |||||||| || ||||| || ||||||| |||||||| ||
Sbjct: 20448 ttaagccgtcctccgtacccataccatatgggacaatgcctgctaaaaagaatttccaca 20389
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
|||||||||||||| || | ||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 20388 gaaccaagagcccaccgaagcacctggttcagacgatccgaaagattaattggggcagac 20329
Query: 1207 cccttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatc 1266
|||||||| || || |||||||||||||| || ||| || | ||||||||||
Sbjct: 20328 cccttgaatgctggtcgcttaggcatgcagtagattgaccgccagccacgtgcatgcatc 20269
Query: 1267 ttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatct 1318
||||| ||||| | ||||||||| |||||||| ||||| |||||||| ||||
Sbjct: 20268 ttgaatccagtgagaatatcttctgtaacagaaccatagatccatccaatct 20217
Score = 99.6 bits (50), Expect = 8e-018
Identities = 167/206 (81%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||||||||||| || |||||||| ||||| || || ||||| |
Sbjct: 20932 atcagaagggttgtccacttgaacatgtagagctcagcgaaatcgccttcttcatcagag 20873
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|||||||| ||||| |||||| | || || || || || ||||| || | ||||| |||
Sbjct: 20872 gcctttgaggtgacagtgaagctggtatcaattccagcaagcaccttcagcagaccctgg 20813
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|| || ||||| ||||| || || | || ||||| ||||||||||||||||| ||||||
Sbjct: 20812 aagaccgcaaatagatgagcggaaatacctccaataacccaaaactgctcattcctccac 20753
Query: 865 caatcctcaatgccaacaccactcca 890
|| || || |||||||||||||||||
Sbjct: 20752 cattcatcgatgccaacaccactcca 20727
Score = 79.8 bits (40), Expect = 8e-012
Identities = 97/116 (83%)
Strand = Plus / Minus
Query: 2447 tcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggacagg 2506
|||||||| ||||| || ||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 18246 tcatcagacacatagcaagataccttatcaacagggtaatccacagcaaggatggagagc 18187
Query: 2507 acagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaa 2562
||||| ||| |||| | ||||||||||| || | |||||||| ||||| |||||
Sbjct: 18186 acagtattggcagtgacaagaggaggttctttcataggatccacagtactgacaaa 18131
Score = 71.9 bits (36), Expect = 2e-009
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 2621 ctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagccaa 2680
||||| |||||||||||||||||||| || ||||||| ||||||||||| |||| |||
Sbjct: 17979 ctatccaggtaagtttcacggttgattggggaccacttggggaactgatccagaatccag 17920
Query: 2681 gacaaagcaaaccaaa 2696
|| | |||||||||||
Sbjct: 17919 gatagagcaaaccaaa 17904
Score = 54.0 bits (27), Expect = 4e-004
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 1885 tggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatc 1944
||||||||| | ||| ||||||||||||| ||||||||||| | |||| |||||||||
Sbjct: 19063 tggatccataaggaagcacatagcctctcggagagctttgctattgttgatgtagtgatc 19004
Query: 1945 aca 1947
|||
Sbjct: 19003 aca 19001
Score = 40.1 bits (20), Expect = 6.5
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1800 tgttccggtttgcatatcgatcat 1823
|||||| |||||||||||||||||
Sbjct: 19148 tgttcctgtttgcatatcgatcat 19125
>gb|AC145384.2| Oryza sativa chromosome 3 BAC OSJNBa0060M17 genomic sequence,
complete sequence
Length = 41693
Score = 141 bits (71), Expect = 2e-030
Identities = 152/179 (84%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || || ||||| |||| || |||||||| || |||||||||
Sbjct: 6169 acccacagcaaggagaagatcgatgcaaggaggatggcccaaacaacaacaatggtcggt 6228
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||||||| |||||||||||||| ||||| ||||| ||||||| |||||||||
Sbjct: 6229 gtacggttctgccgacccatgagacccttaaggaaggggtacaggtggacaatcacccag 6288
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagc 626
| |||||||| |||||||| || || ||||||||||| ||||||||||||||||||||
Sbjct: 6289 aaggcaaagaagagcttcccaaagagcggaccccatgactggtagccactgttgatagc 6347
Score = 135 bits (68), Expect = 1e-028
Identities = 236/292 (80%)
Strand = Plus / Plus
Query: 1027 agtgggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagc 1086
||||| || ||||| | |||||||| | ||||||||||||| || | ||||||||| | |
Sbjct: 6830 agtggaatcgatgtgagtggataaatagtggtgttgatgtaagcaaatctctccaggaac 6889
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|| |||| ||| ||| |||||||| || ||||| || ||||||| |||||||| ||
Sbjct: 6890 ttaagccgtcctccgtacccataccatatgggacaatgcctgctaaaaagaatttccaca 6949
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
|||||||||||||| || | ||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 6950 gaaccaagagcccaccgaagcacctggttcagacgatccgaaagattaattggggcagac 7009
Query: 1207 cccttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatc 1266
|||||||| || || |||||||||||||| || ||| || | ||||||||||
Sbjct: 7010 cccttgaatgctggtcgcttaggcatgcagtagattgaccgccagccacgtgcatgcatc 7069
Query: 1267 ttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatct 1318
||||| ||||| | ||||||||| |||||||| ||||| |||||||| ||||
Sbjct: 7070 ttgaatccagtgagaatatcttctgtaacagaaccatagatccatccaatct 7121
Score = 99.6 bits (50), Expect = 8e-018
Identities = 167/206 (81%)
Strand = Plus / Plus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||||||||||| || |||||||| ||||| || || ||||| |
Sbjct: 6406 atcagaagggttgtccacttgaacatgtagagctcagcgaaatcgccttcttcatcagag 6465
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|||||||| ||||| |||||| | || || || || || ||||| || | ||||| |||
Sbjct: 6466 gcctttgaggtgacagtgaagctggtatcaattccagcaagcaccttcagcagaccctgg 6525
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|| || ||||| ||||| || || | || ||||| ||||||||||||||||| ||||||
Sbjct: 6526 aagaccgcaaatagatgagcggaaatacctccaataacccaaaactgctcattcctccac 6585
Query: 865 caatcctcaatgccaacaccactcca 890
|| || || |||||||||||||||||
Sbjct: 6586 cattcatcgatgccaacaccactcca 6611
Score = 79.8 bits (40), Expect = 8e-012
Identities = 97/116 (83%)
Strand = Plus / Plus
Query: 2447 tcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggacagg 2506
|||||||| ||||| || ||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 9092 tcatcagacacatagcaagataccttatcaacagggtaatccacagcaaggatggagagc 9151
Query: 2507 acagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaa 2562
||||| ||| |||| | ||||||||||| || | |||||||| ||||| |||||
Sbjct: 9152 acagtattggcagtgacaagaggaggttctttcataggatccacagtactgacaaa 9207
Score = 71.9 bits (36), Expect = 2e-009
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 2621 ctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagccaa 2680
||||| |||||||||||||||||||| || ||||||| ||||||||||| |||| |||
Sbjct: 9359 ctatccaggtaagtttcacggttgattggggaccacttggggaactgatccagaatccag 9418
Query: 2681 gacaaagcaaaccaaa 2696
|| | |||||||||||
Sbjct: 9419 gatagagcaaaccaaa 9434
Score = 54.0 bits (27), Expect = 4e-004
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 1885 tggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatc 1944
||||||||| | ||| ||||||||||||| ||||||||||| | |||| |||||||||
Sbjct: 8275 tggatccataaggaagcacatagcctctcggagagctttgctattgttgatgtagtgatc 8334
Query: 1945 aca 1947
|||
Sbjct: 8335 aca 8337
Score = 40.1 bits (20), Expect = 6.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1800 tgttccggtttgcatatcgatcat 1823
|||||| |||||||||||||||||
Sbjct: 8190 tgttcctgtttgcatatcgatcat 8213
>gb|AACV01008134.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg008134, whole
genome shotgun sequence
Length = 22039
Score = 141 bits (71), Expect = 2e-030
Identities = 152/179 (84%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || || ||||| |||| || |||||||| || |||||||||
Sbjct: 17732 acccacagcaaggagaagatcgatgcaaggaggatggcccaaacaacaacaatggtcggt 17673
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||||||| |||||||||||||| ||||| ||||| ||||||| |||||||||
Sbjct: 17672 gtacggttctgccgacccatgagacccttaaggaaggggtacaggtggacaatcacccag 17613
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagc 626
| |||||||| |||||||| || || ||||||||||| ||||||||||||||||||||
Sbjct: 17612 aaggcaaagaagagcttcccaaagagcggaccccatgactggtagccactgttgatagc 17554
Score = 135 bits (68), Expect = 1e-028
Identities = 236/292 (80%)
Strand = Plus / Minus
Query: 1027 agtgggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagc 1086
||||| || ||||| | |||||||| | ||||||||||||| || | ||||||||| | |
Sbjct: 17071 agtggaatcgatgtgagtggataaatagtggtgttgatgtaagcaaatctctccaggaac 17012
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|| |||| ||| ||| |||||||| || ||||| || ||||||| |||||||| ||
Sbjct: 17011 ttaagccgtcctccgtacccataccatatgggacaatgcctgctaaaaagaatttccaca 16952
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
|||||||||||||| || | ||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 16951 gaaccaagagcccaccgaagcacctggttcagacgatccgaaagattaattggggcagac 16892
Query: 1207 cccttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatc 1266
|||||||| || || |||||||||||||| || ||| || | ||||||||||
Sbjct: 16891 cccttgaatgctggtcgcttaggcatgcagtagattgaccgccagccacgtgcatgcatc 16832
Query: 1267 ttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatct 1318
||||| ||||| | ||||||||| |||||||| ||||| |||||||| ||||
Sbjct: 16831 ttgaatccagtgagaatatcttctgtaacagaaccatagatccatccaatct 16780
Score = 99.6 bits (50), Expect = 8e-018
Identities = 167/206 (81%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||||||||||| || |||||||| ||||| || || ||||| |
Sbjct: 17495 atcagaagggttgtccacttgaacatgtagagctcagcgaaatcgccttcttcatcagag 17436
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|||||||| ||||| |||||| | || || || || || ||||| || | ||||| |||
Sbjct: 17435 gcctttgaggtgacagtgaagctggtatcaattccagcaagcaccttcagcagaccctgg 17376
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|| || ||||| ||||| || || | || ||||| ||||||||||||||||| ||||||
Sbjct: 17375 aagaccgcaaatagatgagcggaaatacctccaataacccaaaactgctcattcctccac 17316
Query: 865 caatcctcaatgccaacaccactcca 890
|| || || |||||||||||||||||
Sbjct: 17315 cattcatcgatgccaacaccactcca 17290
Score = 79.8 bits (40), Expect = 8e-012
Identities = 97/116 (83%)
Strand = Plus / Minus
Query: 2447 tcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggacagg 2506
|||||||| ||||| || ||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 14809 tcatcagacacatagcaagataccttatcaacagggtaatccacagcaaggatggagagc 14750
Query: 2507 acagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaa 2562
||||| ||| |||| | ||||||||||| || | |||||||| ||||| |||||
Sbjct: 14749 acagtattggcagtgacaagaggaggttctttcataggatccacagtactgacaaa 14694
Score = 71.9 bits (36), Expect = 2e-009
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 2621 ctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagccaa 2680
||||| |||||||||||||||||||| || ||||||| ||||||||||| |||| |||
Sbjct: 14542 ctatccaggtaagtttcacggttgattggggaccacttggggaactgatccagaatccag 14483
Query: 2681 gacaaagcaaaccaaa 2696
|| | |||||||||||
Sbjct: 14482 gatagagcaaaccaaa 14467
Score = 54.0 bits (27), Expect = 4e-004
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 1885 tggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatc 1944
||||||||| | ||| ||||||||||||| ||||||||||| | |||| |||||||||
Sbjct: 15626 tggatccataaggaagcacatagcctctcggagagctttgctattgttgatgtagtgatc 15567
Query: 1945 aca 1947
|||
Sbjct: 15566 aca 15564
Score = 40.1 bits (20), Expect = 6.5
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1800 tgttccggtttgcatatcgatcat 1823
|||||| |||||||||||||||||
Sbjct: 15711 tgttcctgtttgcatatcgatcat 15688
>ref|XM_470040.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3607
Score = 141 bits (71), Expect = 2e-030
Identities = 152/179 (84%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || || ||||| |||| || |||||||| || |||||||||
Sbjct: 3540 acccacagcaaggagaagatcgatgcaaggaggatggcccaaacaacaacaatggtcggt 3481
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||||||| |||||||||||||| ||||| ||||| ||||||| |||||||||
Sbjct: 3480 gtacggttctgccgacccatgagacccttaaggaaggggtacaggtggacaatcacccag 3421
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagc 626
| |||||||| |||||||| || || ||||||||||| ||||||||||||||||||||
Sbjct: 3420 aaggcaaagaagagcttcccaaagagcggaccccatgactggtagccactgttgatagc 3362
Score = 141 bits (71), Expect = 2e-030
Identities = 629/813 (77%), Gaps = 2/813 (0%)
Strand = Plus / Minus
Query: 1885 tggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatc 1944
||||||||| | ||| ||||||||||||| ||||||||||| | |||| |||||||||
Sbjct: 2113 tggatccataaggaagcacatagcctctcggagagctttgctattgttgatgtagtgatc 2054
Query: 1945 acaatccacatt-aagaagataagcaccattcgtcaggacagctgatacgcgaatcaaag 2003
||| || | ||| || ||| || ||||| || |||||||||||||| |||| | |
Sbjct: 2053 acagtcaagattcaacaag-tattgtccattagtaaggacagctgatacacgaacaagtg 1995
Query: 2004 cattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaacat 2063
||||||| ||||||||||| || ||||| ||||| || || | || |||||||| ||||
Sbjct: 1994 cattcatagcaccagcctttttatggtgttggaatccaggacgtttctcacgagacacat 1935
Query: 2064 aaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtggcccaagaata 2123
| || | || || | |||||| || || || ||||| || ||||| || || | ||| |
Sbjct: 1934 agactaaacgaggaagctcattgccttcggtatcaaggcctccactatgaccaaggaaaa 1875
Query: 2124 cttggatcattccnggatgatctctagggttattcccaggccanggagtgccatcagcca 2183
| || |||||||| ||||| ||||| | || || |||||||| || |||||||| ||
Sbjct: 1874 cctgaatcattccaggatggtctctggtattgttaccaggccaaggtgtgccatcttgca 1815
Query: 2184 tggtccagccctcctcaggtattttttgcgcttttgcaacaagggcatcgatccgtactt 2243
| |||| || |||||||| | ||| || || || || || || |||| | || ||||
Sbjct: 1814 taatccatccttcctcaggaactttctgtgccttggcgacgagagcattaacacgaactt 1755
Query: 2244 tgaactcttcatactccctcttcatagcccgcctttctttcacaaaagaaggttgtattt 2303
| || |||||||| ||||||||||| || || | ||||| |||||||||| || | ||
Sbjct: 1754 taaattcttcatattccctcttcatggcacgacgatctttaacaaaagaagcctgaactt 1695
Query: 2304 tgtcctttaggtaatctatctttcgagcaaagtaaaactctggagccctaggttcaatgt 2363
|||| || | |||||| || || | |||||||| |||||||||| || ||||| |||
Sbjct: 1694 tgtctttcaagtaatcaattttctgtgcaaagtaccactctggagctctgggttctatgc 1635
Query: 2364 tgtgtttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagctt 2423
||| || || || || || |||||||| || ||||| |||| || |||| || || |
Sbjct: 1634 tgtactttttacagaacggtacccattttctagcaaattctgaagtctcagcaagcgcat 1575
Query: 2424 caaaagtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggt 2483
|||| || ||||| || | || |||||||| ||||| || ||||| || ||||||||||
Sbjct: 1574 caaatgttaacattgcagctccatcatcagacacatagcaagataccttatcaacagggt 1515
Query: 2484 aatccacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtg 2543
||||||||||||| ||||| || ||||| ||| |||| | ||||||||||| || | |
Sbjct: 1514 aatccacagcaaggatggagagcacagtattggcagtgacaagaggaggttctttcatag 1455
Query: 2544 gatccactgtactaacaaagacatcgattggagccaactgggatggctcaccctccctat 2603
||||||| ||||| ||||| | || | |||||||| || ||||| ||||| |||| |
Sbjct: 1454 gatccacagtactgacaaaaatgtcaacaggagccaattgagatggttcaccttcccggt 1395
Query: 2604 catatctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttggga 2663
|||| || || || || ||||| |||||||||||||||||||| || ||||||| ||||
Sbjct: 1394 cataccttaaagccagcctatccaggtaagtttcacggttgattggggaccacttgggga 1335
Query: 2664 actgatctagaagccaagacaaagcaaaccaaa 2696
||||||| |||| ||| || | |||||||||||
Sbjct: 1334 actgatccagaatccaggatagagcaaaccaaa 1302
Score = 137 bits (69), Expect = 4e-029
Identities = 237/293 (80%)
Strand = Plus / Minus
Query: 1027 agtgggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagc 1086
||||| || ||||| | |||||||| | ||||||||||||| || | ||||||||| | |
Sbjct: 2961 agtggaatcgatgtgagtggataaatagtggtgttgatgtaagcaaatctctccaggaac 2902
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|| |||| ||| ||| |||||||| || ||||| || ||||||| |||||||| ||
Sbjct: 2901 ttaagccgtcctccgtacccataccatatgggacaatgcctgctaaaaagaatttccaca 2842
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
|||||||||||||| || | ||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 2841 gaaccaagagcccaccgaagcacctggttcagacgatccgaaagattaattggggcagac 2782
Query: 1207 cccttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatc 1266
|||||||| || || |||||||||||||| || ||| || | ||||||||||
Sbjct: 2781 cccttgaatgctggtcgcttaggcatgcagtagattgaccgccagccacgtgcatgcatc 2722
Query: 1267 ttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctc 1319
||||| ||||| | ||||||||| |||||||| ||||| |||||||| |||||
Sbjct: 2721 ttgaatccagtgagaatatcttctgtaacagaaccatagatccatccaatctc 2669
Score = 99.6 bits (50), Expect = 8e-018
Identities = 167/206 (81%)
Strand = Plus / Minus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||||||||||| || |||||||| ||||| || || ||||| |
Sbjct: 3303 atcagaagggttgtccacttgaacatgtagagctcagcgaaatcgccttcttcatcagag 3244
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|||||||| ||||| |||||| | || || || || || ||||| || | ||||| |||
Sbjct: 3243 gcctttgaggtgacagtgaagctggtatcaattccagcaagcaccttcagcagaccctgg 3184
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|| || ||||| ||||| || || | || ||||| ||||||||||||||||| ||||||
Sbjct: 3183 aagaccgcaaatagatgagcggaaatacctccaataacccaaaactgctcattcctccac 3124
Query: 865 caatcctcaatgccaacaccactcca 890
|| || || |||||||||||||||||
Sbjct: 3123 cattcatcgatgccaacaccactcca 3098
Score = 63.9 bits (32), Expect = 5e-007
Identities = 74/88 (84%)
Strand = Plus / Minus
Query: 1736 gttcccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaag 1795
|||||||||||||| |||||||| | ||||| ||||| ||| ||||||||| || ||
Sbjct: 2262 gttcccacataaactggtccttggagaccatcgagacctctcaaattaatatcgaaaaac 2203
Query: 1796 acaatgttccggtttgcatatcgatcat 1823
|| |||||| |||||||||||||||||
Sbjct: 2202 acggtgttcctgtttgcatatcgatcat 2175
>ref|NT_107188.1| Oryza sativa (japonica cultivar-group)
Length = 1363716
Score = 141 bits (71), Expect = 2e-030
Identities = 152/179 (84%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || || ||||| |||| || |||||||| || |||||||||
Sbjct: 133387 acccacagcaaggagaagatcgatgcaaggaggatggcccaaacaacaacaatggtcggt 133446
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||||||| |||||||||||||| ||||| ||||| ||||||| |||||||||
Sbjct: 133447 gtacggttctgccgacccatgagacccttaaggaaggggtacaggtggacaatcacccag 133506
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagc 626
| |||||||| |||||||| || || ||||||||||| ||||||||||||||||||||
Sbjct: 133507 aaggcaaagaagagcttcccaaagagcggaccccatgactggtagccactgttgatagc 133565
Score = 135 bits (68), Expect = 1e-028
Identities = 236/292 (80%)
Strand = Plus / Plus
Query: 1027 agtgggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagc 1086
||||| || ||||| | |||||||| | ||||||||||||| || | ||||||||| | |
Sbjct: 134048 agtggaatcgatgtgagtggataaatagtggtgttgatgtaagcaaatctctccaggaac 134107
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|| |||| ||| ||| |||||||| || ||||| || ||||||| |||||||| ||
Sbjct: 134108 ttaagccgtcctccgtacccataccatatgggacaatgcctgctaaaaagaatttccaca 134167
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
|||||||||||||| || | ||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 134168 gaaccaagagcccaccgaagcacctggttcagacgatccgaaagattaattggggcagac 134227
Query: 1207 cccttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatc 1266
|||||||| || || |||||||||||||| || ||| || | ||||||||||
Sbjct: 134228 cccttgaatgctggtcgcttaggcatgcagtagattgaccgccagccacgtgcatgcatc 134287
Query: 1267 ttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatct 1318
||||| ||||| | ||||||||| |||||||| ||||| |||||||| ||||
Sbjct: 134288 ttgaatccagtgagaatatcttctgtaacagaaccatagatccatccaatct 134339
Score = 99.6 bits (50), Expect = 8e-018
Identities = 167/206 (81%)
Strand = Plus / Plus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||||||||||| || |||||||| ||||| || || ||||| |
Sbjct: 133624 atcagaagggttgtccacttgaacatgtagagctcagcgaaatcgccttcttcatcagag 133683
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|||||||| ||||| |||||| | || || || || || ||||| || | ||||| |||
Sbjct: 133684 gcctttgaggtgacagtgaagctggtatcaattccagcaagcaccttcagcagaccctgg 133743
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|| || ||||| ||||| || || | || ||||| ||||||||||||||||| ||||||
Sbjct: 133744 aagaccgcaaatagatgagcggaaatacctccaataacccaaaactgctcattcctccac 133803
Query: 865 caatcctcaatgccaacaccactcca 890
|| || || |||||||||||||||||
Sbjct: 133804 cattcatcgatgccaacaccactcca 133829
Score = 79.8 bits (40), Expect = 8e-012
Identities = 97/116 (83%)
Strand = Plus / Plus
Query: 2447 tcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggacagg 2506
|||||||| ||||| || ||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 136310 tcatcagacacatagcaagataccttatcaacagggtaatccacagcaaggatggagagc 136369
Query: 2507 acagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaa 2562
||||| ||| |||| | ||||||||||| || | |||||||| ||||| |||||
Sbjct: 136370 acagtattggcagtgacaagaggaggttctttcataggatccacagtactgacaaa 136425
Score = 71.9 bits (36), Expect = 2e-009
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 2621 ctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagccaa 2680
||||| |||||||||||||||||||| || ||||||| ||||||||||| |||| |||
Sbjct: 136577 ctatccaggtaagtttcacggttgattggggaccacttggggaactgatccagaatccag 136636
Query: 2681 gacaaagcaaaccaaa 2696
|| | |||||||||||
Sbjct: 136637 gatagagcaaaccaaa 136652
Score = 54.0 bits (27), Expect = 4e-004
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 1885 tggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatc 1944
||||||||| | ||| ||||||||||||| ||||||||||| | |||| |||||||||
Sbjct: 135493 tggatccataaggaagcacatagcctctcggagagctttgctattgttgatgtagtgatc 135552
Query: 1945 aca 1947
|||
Sbjct: 135553 aca 135555
Score = 40.1 bits (20), Expect = 6.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1800 tgttccggtttgcatatcgatcat 1823
|||||| |||||||||||||||||
Sbjct: 135408 tgttcctgtttgcatatcgatcat 135431
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 141 bits (71), Expect = 2e-030
Identities = 152/179 (84%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || || ||||| |||| || |||||||| || |||||||||
Sbjct: 7194216 acccacagcaaggagaagatcgatgcaaggaggatggcccaaacaacaacaatggtcggt 7194275
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||||||| |||||||||||||| ||||| ||||| ||||||| |||||||||
Sbjct: 7194276 gtacggttctgccgacccatgagacccttaaggaaggggtacaggtggacaatcacccag 7194335
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagc 626
| |||||||| |||||||| || || ||||||||||| ||||||||||||||||||||
Sbjct: 7194336 aaggcaaagaagagcttcccaaagagcggaccccatgactggtagccactgttgatagc 7194394
Score = 135 bits (68), Expect = 1e-028
Identities = 236/292 (80%)
Strand = Plus / Plus
Query: 1027 agtgggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagc 1086
||||| || ||||| | |||||||| | ||||||||||||| || | ||||||||| | |
Sbjct: 7194877 agtggaatcgatgtgagtggataaatagtggtgttgatgtaagcaaatctctccaggaac 7194936
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|| |||| ||| ||| |||||||| || ||||| || ||||||| |||||||| ||
Sbjct: 7194937 ttaagccgtcctccgtacccataccatatgggacaatgcctgctaaaaagaatttccaca 7194996
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
|||||||||||||| || | ||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 7194997 gaaccaagagcccaccgaagcacctggttcagacgatccgaaagattaattggggcagac 7195056
Query: 1207 cccttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatc 1266
|||||||| || || |||||||||||||| || ||| || | ||||||||||
Sbjct: 7195057 cccttgaatgctggtcgcttaggcatgcagtagattgaccgccagccacgtgcatgcatc 7195116
Query: 1267 ttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatct 1318
||||| ||||| | ||||||||| |||||||| ||||| |||||||| ||||
Sbjct: 7195117 ttgaatccagtgagaatatcttctgtaacagaaccatagatccatccaatct 7195168
Score = 109 bits (55), Expect = 8e-021
Identities = 124/147 (84%)
Strand = Plus / Minus
Query: 746 cctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgga 805
|||||||||| || |||||| |||| ||||| || |||| || || | || |||||||
Sbjct: 8599057 cctttgatgtcacagtgaagcttgtatcgataccagctatgaccttgagaagtccttgga 8598998
Query: 806 acacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccacc 865
|||||||||||||||||| |||| || |||||||||||||||||||| || |||||||
Sbjct: 8598997 acacagcaaagagatgtgaagagacacctccaatgacccaaaactgctcgttcctccacc 8598938
Query: 866 aatcctcaatgccaacaccactccatc 892
|||| || ||||| |||||||||||||
Sbjct: 8598937 aatcatcgatgcctacaccactccatc 8598911
Score = 99.6 bits (50), Expect = 8e-018
Identities = 167/206 (81%)
Strand = Plus / Plus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||||||||||| || |||||||| ||||| || || ||||| |
Sbjct: 7194453 atcagaagggttgtccacttgaacatgtagagctcagcgaaatcgccttcttcatcagag 7194512
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|||||||| ||||| |||||| | || || || || || ||||| || | ||||| |||
Sbjct: 7194513 gcctttgaggtgacagtgaagctggtatcaattccagcaagcaccttcagcagaccctgg 7194572
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|| || ||||| ||||| || || | || ||||| ||||||||||||||||| ||||||
Sbjct: 7194573 aagaccgcaaatagatgagcggaaatacctccaataacccaaaactgctcattcctccac 7194632
Query: 865 caatcctcaatgccaacaccactcca 890
|| || || |||||||||||||||||
Sbjct: 7194633 cattcatcgatgccaacaccactcca 7194658
Score = 79.8 bits (40), Expect = 8e-012
Identities = 97/116 (83%)
Strand = Plus / Plus
Query: 2447 tcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggacagg 2506
|||||||| ||||| || ||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 7197139 tcatcagacacatagcaagataccttatcaacagggtaatccacagcaaggatggagagc 7197198
Query: 2507 acagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaa 2562
||||| ||| |||| | ||||||||||| || | |||||||| ||||| |||||
Sbjct: 7197199 acagtattggcagtgacaagaggaggttctttcataggatccacagtactgacaaa 7197254
Score = 71.9 bits (36), Expect = 2e-009
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 2621 ctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagccaa 2680
||||| |||||||||||||||||||| || ||||||| ||||||||||| |||| |||
Sbjct: 7197406 ctatccaggtaagtttcacggttgattggggaccacttggggaactgatccagaatccag 7197465
Query: 2681 gacaaagcaaaccaaa 2696
|| | |||||||||||
Sbjct: 7197466 gatagagcaaaccaaa 7197481
Score = 60.0 bits (30), Expect = 7e-006
Identities = 114/142 (80%)
Strand = Plus / Minus
Query: 1811 gcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagtt 1870
|||||||||||||| ||| || ||||| ||||||||||| ||||| ||||| ||| |
Sbjct: 8597601 gcatatcgatcatgacggtcaatgccatcgaatctttgtgggaactgcacataacaaact 8597542
Query: 1871 ttccttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgcta 1930
||| |||||| ||||||||||| |||||||| || || | | ||| |||||| |
Sbjct: 8597541 ttctttcctaccaagggatccatcataaaacacattgcttcctttatagccttgctgttg 8597482
Query: 1931 ttgaagtagtgatcacaatcca 1952
|||| |||||||||||||||||
Sbjct: 8597481 ttgatgtagtgatcacaatcca 8597460
Score = 56.0 bits (28), Expect = 1e-004
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 2645 ataggataccactttgggaactgatctagaagccaagaca 2684
|||||| ||||||||||||||||||| |||| ||||||||
Sbjct: 8596395 ataggaaaccactttgggaactgatcaagaatccaagaca 8596356
Score = 54.0 bits (27), Expect = 4e-004
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 1885 tggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatc 1944
||||||||| | ||| ||||||||||||| ||||||||||| | |||| |||||||||
Sbjct: 7196322 tggatccataaggaagcacatagcctctcggagagctttgctattgttgatgtagtgatc 7196381
Query: 1945 aca 1947
|||
Sbjct: 7196382 aca 7196384
Score = 50.1 bits (25), Expect = 0.007
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgatt 607
|||||||| | |||||||||||||||||| || || || ||||||||||
Sbjct: 8599241 atcacccaaaatgcaaagaacagcttcccaaagagcggcccccatgatt 8599193
Score = 48.1 bits (24), Expect = 0.027
Identities = 111/140 (79%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||| ||| ||||||| || | |||||||| || |||||||| |||
Sbjct: 8596750 ttgcagaaaggaacccacttctttgcaaattcagatgtttcagacagtgcttcaaatgtc 8596691
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | || |||||||||||||| || || || ||||| || || ||||| ||
Sbjct: 8596690 agcatggcagccccatcatcagaaacatagcaagagaccttgtcgaccggataatctacc 8596631
Query: 2492 gcaagaatggacaggacagt 2511
||||| || ||||| |||||
Sbjct: 8596630 gcaaggatagacagaacagt 8596611
Score = 40.1 bits (20), Expect = 6.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1800 tgttccggtttgcatatcgatcat 1823
|||||| |||||||||||||||||
Sbjct: 7196237 tgttcctgtttgcatatcgatcat 7196260
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 141 bits (71), Expect = 2e-030
Identities = 152/179 (84%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || || ||||| |||| || |||||||| || |||||||||
Sbjct: 34460379 acccacagcaaggagaagatcgatgcaaggaggatggcccaaacaacaacaatggtcggt 34460438
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||||||| |||||||||||||| ||||| ||||| ||||||| |||||||||
Sbjct: 34460439 gtacggttctgccgacccatgagacccttaaggaaggggtacaggtggacaatcacccag 34460498
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagc 626
| |||||||| |||||||| || || ||||||||||| ||||||||||||||||||||
Sbjct: 34460499 aaggcaaagaagagcttcccaaagagcggaccccatgactggtagccactgttgatagc 34460557
Score = 135 bits (68), Expect = 1e-028
Identities = 236/292 (80%)
Strand = Plus / Plus
Query: 1027 agtgggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagc 1086
||||| || ||||| | |||||||| | ||||||||||||| || | ||||||||| | |
Sbjct: 34461040 agtggaatcgatgtgagtggataaatagtggtgttgatgtaagcaaatctctccaggaac 34461099
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|| |||| ||| ||| |||||||| || ||||| || ||||||| |||||||| ||
Sbjct: 34461100 ttaagccgtcctccgtacccataccatatgggacaatgcctgctaaaaagaatttccaca 34461159
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
|||||||||||||| || | ||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 34461160 gaaccaagagcccaccgaagcacctggttcagacgatccgaaagattaattggggcagac 34461219
Query: 1207 cccttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatc 1266
|||||||| || || |||||||||||||| || ||| || | ||||||||||
Sbjct: 34461220 cccttgaatgctggtcgcttaggcatgcagtagattgaccgccagccacgtgcatgcatc 34461279
Query: 1267 ttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatct 1318
||||| ||||| | ||||||||| |||||||| ||||| |||||||| ||||
Sbjct: 34461280 ttgaatccagtgagaatatcttctgtaacagaaccatagatccatccaatct 34461331
Score = 109 bits (55), Expect = 8e-021
Identities = 124/147 (84%)
Strand = Plus / Minus
Query: 746 cctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgga 805
|||||||||| || |||||| |||| ||||| || |||| || || | || |||||||
Sbjct: 35865220 cctttgatgtcacagtgaagcttgtatcgataccagctatgaccttgagaagtccttgga 35865161
Query: 806 acacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccacc 865
|||||||||||||||||| |||| || |||||||||||||||||||| || |||||||
Sbjct: 35865160 acacagcaaagagatgtgaagagacacctccaatgacccaaaactgctcgttcctccacc 35865101
Query: 866 aatcctcaatgccaacaccactccatc 892
|||| || ||||| |||||||||||||
Sbjct: 35865100 aatcatcgatgcctacaccactccatc 35865074
Score = 99.6 bits (50), Expect = 8e-018
Identities = 167/206 (81%)
Strand = Plus / Plus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||||||||||| || |||||||| ||||| || || ||||| |
Sbjct: 34460616 atcagaagggttgtccacttgaacatgtagagctcagcgaaatcgccttcttcatcagag 34460675
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|||||||| ||||| |||||| | || || || || || ||||| || | ||||| |||
Sbjct: 34460676 gcctttgaggtgacagtgaagctggtatcaattccagcaagcaccttcagcagaccctgg 34460735
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|| || ||||| ||||| || || | || ||||| ||||||||||||||||| ||||||
Sbjct: 34460736 aagaccgcaaatagatgagcggaaatacctccaataacccaaaactgctcattcctccac 34460795
Query: 865 caatcctcaatgccaacaccactcca 890
|| || || |||||||||||||||||
Sbjct: 34460796 cattcatcgatgccaacaccactcca 34460821
Score = 79.8 bits (40), Expect = 8e-012
Identities = 97/116 (83%)
Strand = Plus / Plus
Query: 2447 tcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggacagg 2506
|||||||| ||||| || ||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 34463302 tcatcagacacatagcaagataccttatcaacagggtaatccacagcaaggatggagagc 34463361
Query: 2507 acagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaa 2562
||||| ||| |||| | ||||||||||| || | |||||||| ||||| |||||
Sbjct: 34463362 acagtattggcagtgacaagaggaggttctttcataggatccacagtactgacaaa 34463417
Score = 71.9 bits (36), Expect = 2e-009
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 2621 ctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagccaa 2680
||||| |||||||||||||||||||| || ||||||| ||||||||||| |||| |||
Sbjct: 34463569 ctatccaggtaagtttcacggttgattggggaccacttggggaactgatccagaatccag 34463628
Query: 2681 gacaaagcaaaccaaa 2696
|| | |||||||||||
Sbjct: 34463629 gatagagcaaaccaaa 34463644
Score = 60.0 bits (30), Expect = 7e-006
Identities = 114/142 (80%)
Strand = Plus / Minus
Query: 1811 gcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagtt 1870
|||||||||||||| ||| || ||||| ||||||||||| ||||| ||||| ||| |
Sbjct: 35863764 gcatatcgatcatgacggtcaatgccatcgaatctttgtgggaactgcacataacaaact 35863705
Query: 1871 ttccttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgcta 1930
||| |||||| ||||||||||| |||||||| || || | | ||| |||||| |
Sbjct: 35863704 ttctttcctaccaagggatccatcataaaacacattgcttcctttatagccttgctgttg 35863645
Query: 1931 ttgaagtagtgatcacaatcca 1952
|||| |||||||||||||||||
Sbjct: 35863644 ttgatgtagtgatcacaatcca 35863623
Score = 56.0 bits (28), Expect = 1e-004
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 2645 ataggataccactttgggaactgatctagaagccaagaca 2684
|||||| ||||||||||||||||||| |||| ||||||||
Sbjct: 35862558 ataggaaaccactttgggaactgatcaagaatccaagaca 35862519
Score = 54.0 bits (27), Expect = 4e-004
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 1885 tggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatc 1944
||||||||| | ||| ||||||||||||| ||||||||||| | |||| |||||||||
Sbjct: 34462485 tggatccataaggaagcacatagcctctcggagagctttgctattgttgatgtagtgatc 34462544
Query: 1945 aca 1947
|||
Sbjct: 34462545 aca 34462547
Score = 50.1 bits (25), Expect = 0.007
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgatt 607
|||||||| | |||||||||||||||||| || || || ||||||||||
Sbjct: 35865404 atcacccaaaatgcaaagaacagcttcccaaagagcggcccccatgatt 35865356
Score = 48.1 bits (24), Expect = 0.027
Identities = 111/140 (79%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||| ||| ||||||| || | |||||||| || |||||||| |||
Sbjct: 35862913 ttgcagaaaggaacccacttctttgcaaattcagatgtttcagacagtgcttcaaatgtc 35862854
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | || |||||||||||||| || || || ||||| || || ||||| ||
Sbjct: 35862853 agcatggcagccccatcatcagaaacatagcaagagaccttgtcgaccggataatctacc 35862794
Query: 2492 gcaagaatggacaggacagt 2511
||||| || ||||| |||||
Sbjct: 35862793 gcaaggatagacagaacagt 35862774
Score = 40.1 bits (20), Expect = 6.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1800 tgttccggtttgcatatcgatcat 1823
|||||| |||||||||||||||||
Sbjct: 34462400 tgttcctgtttgcatatcgatcat 34462423
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 141 bits (71), Expect = 2e-030
Identities = 152/179 (84%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || || ||||| |||| || |||||||| || |||||||||
Sbjct: 33567452 acccacagcaaggagaagatcgatgcaaggaggatggcccaaacaacaacaatggtcggt 33567511
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||||||| |||||||||||||| ||||| ||||| ||||||| |||||||||
Sbjct: 33567512 gtacggttctgccgacccatgagacccttaaggaaggggtacaggtggacaatcacccag 33567571
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagc 626
| |||||||| |||||||| || || ||||||||||| ||||||||||||||||||||
Sbjct: 33567572 aaggcaaagaagagcttcccaaagagcggaccccatgactggtagccactgttgatagc 33567630
Score = 135 bits (68), Expect = 1e-028
Identities = 236/292 (80%)
Strand = Plus / Plus
Query: 1027 agtgggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagc 1086
||||| || ||||| | |||||||| | ||||||||||||| || | ||||||||| | |
Sbjct: 33568113 agtggaatcgatgtgagtggataaatagtggtgttgatgtaagcaaatctctccaggaac 33568172
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|| |||| ||| ||| |||||||| || ||||| || ||||||| |||||||| ||
Sbjct: 33568173 ttaagccgtcctccgtacccataccatatgggacaatgcctgctaaaaagaatttccaca 33568232
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
|||||||||||||| || | ||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 33568233 gaaccaagagcccaccgaagcacctggttcagacgatccgaaagattaattggggcagac 33568292
Query: 1207 cccttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatc 1266
|||||||| || || |||||||||||||| || ||| || | ||||||||||
Sbjct: 33568293 cccttgaatgctggtcgcttaggcatgcagtagattgaccgccagccacgtgcatgcatc 33568352
Query: 1267 ttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatct 1318
||||| ||||| | ||||||||| |||||||| ||||| |||||||| ||||
Sbjct: 33568353 ttgaatccagtgagaatatcttctgtaacagaaccatagatccatccaatct 33568404
Score = 109 bits (55), Expect = 8e-021
Identities = 124/147 (84%)
Strand = Plus / Minus
Query: 746 cctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgga 805
|||||||||| || |||||| |||| ||||| || |||| || || | || |||||||
Sbjct: 34968509 cctttgatgtcacagtgaagcttgtatcgataccagctatgaccttgagaagtccttgga 34968450
Query: 806 acacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccacc 865
|||||||||||||||||| |||| || |||||||||||||||||||| || |||||||
Sbjct: 34968449 acacagcaaagagatgtgaagagacacctccaatgacccaaaactgctcgttcctccacc 34968390
Query: 866 aatcctcaatgccaacaccactccatc 892
|||| || ||||| |||||||||||||
Sbjct: 34968389 aatcatcgatgcctacaccactccatc 34968363
Score = 99.6 bits (50), Expect = 8e-018
Identities = 167/206 (81%)
Strand = Plus / Plus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||||||||||| || |||||||| ||||| || || ||||| |
Sbjct: 33567689 atcagaagggttgtccacttgaacatgtagagctcagcgaaatcgccttcttcatcagag 33567748
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|||||||| ||||| |||||| | || || || || || ||||| || | ||||| |||
Sbjct: 33567749 gcctttgaggtgacagtgaagctggtatcaattccagcaagcaccttcagcagaccctgg 33567808
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|| || ||||| ||||| || || | || ||||| ||||||||||||||||| ||||||
Sbjct: 33567809 aagaccgcaaatagatgagcggaaatacctccaataacccaaaactgctcattcctccac 33567868
Query: 865 caatcctcaatgccaacaccactcca 890
|| || || |||||||||||||||||
Sbjct: 33567869 cattcatcgatgccaacaccactcca 33567894
Score = 79.8 bits (40), Expect = 8e-012
Identities = 97/116 (83%)
Strand = Plus / Plus
Query: 2447 tcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggacagg 2506
|||||||| ||||| || ||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 33570375 tcatcagacacatagcaagataccttatcaacagggtaatccacagcaaggatggagagc 33570434
Query: 2507 acagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaa 2562
||||| ||| |||| | ||||||||||| || | |||||||| ||||| |||||
Sbjct: 33570435 acagtattggcagtgacaagaggaggttctttcataggatccacagtactgacaaa 33570490
Score = 71.9 bits (36), Expect = 2e-009
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 2621 ctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagccaa 2680
||||| |||||||||||||||||||| || ||||||| ||||||||||| |||| |||
Sbjct: 33570642 ctatccaggtaagtttcacggttgattggggaccacttggggaactgatccagaatccag 33570701
Query: 2681 gacaaagcaaaccaaa 2696
|| | |||||||||||
Sbjct: 33570702 gatagagcaaaccaaa 33570717
Score = 60.0 bits (30), Expect = 7e-006
Identities = 114/142 (80%)
Strand = Plus / Minus
Query: 1811 gcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagtt 1870
|||||||||||||| ||| || ||||| ||||||||||| ||||| ||||| ||| |
Sbjct: 34967053 gcatatcgatcatgacggtcaatgccatcgaatctttgtgggaactgcacataacaaact 34966994
Query: 1871 ttccttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgcta 1930
||| |||||| ||||||||||| |||||||| || || | | ||| |||||| |
Sbjct: 34966993 ttctttcctaccaagggatccatcataaaacacattgcttcctttatagccttgctgttg 34966934
Query: 1931 ttgaagtagtgatcacaatcca 1952
|||| |||||||||||||||||
Sbjct: 34966933 ttgatgtagtgatcacaatcca 34966912
Score = 56.0 bits (28), Expect = 1e-004
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 2645 ataggataccactttgggaactgatctagaagccaagaca 2684
|||||| ||||||||||||||||||| |||| ||||||||
Sbjct: 34965847 ataggaaaccactttgggaactgatcaagaatccaagaca 34965808
Score = 54.0 bits (27), Expect = 4e-004
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 1885 tggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatc 1944
||||||||| | ||| ||||||||||||| ||||||||||| | |||| |||||||||
Sbjct: 33569558 tggatccataaggaagcacatagcctctcggagagctttgctattgttgatgtagtgatc 33569617
Query: 1945 aca 1947
|||
Sbjct: 33569618 aca 33569620
Score = 50.1 bits (25), Expect = 0.007
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgatt 607
|||||||| | |||||||||||||||||| || || || ||||||||||
Sbjct: 34968693 atcacccaaaatgcaaagaacagcttcccaaagagcggcccccatgatt 34968645
Score = 48.1 bits (24), Expect = 0.027
Identities = 111/140 (79%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||| ||| ||||||| || | |||||||| || |||||||| |||
Sbjct: 34966202 ttgcagaaaggaacccacttctttgcaaattcagatgtttcagacagtgcttcaaatgtc 34966143
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | || |||||||||||||| || || || ||||| || || ||||| ||
Sbjct: 34966142 agcatggcagccccatcatcagaaacatagcaagagaccttgtcgaccggataatctacc 34966083
Query: 2492 gcaagaatggacaggacagt 2511
||||| || ||||| |||||
Sbjct: 34966082 gcaaggatagacagaacagt 34966063
Score = 40.1 bits (20), Expect = 6.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1800 tgttccggtttgcatatcgatcat 1823
|||||| |||||||||||||||||
Sbjct: 33569473 tgttcctgtttgcatatcgatcat 33569496
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 141 bits (71), Expect = 2e-030
Identities = 152/179 (84%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || || ||||| |||| || |||||||| || |||||||||
Sbjct: 33476942 acccacagcaaggagaagatcgatgcaaggaggatggcccaaacaacaacaatggtcggt 33477001
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|| ||||||||| |||||||||||||| ||||| ||||| ||||||| |||||||||
Sbjct: 33477002 gtacggttctgccgacccatgagacccttaaggaaggggtacaggtggacaatcacccag 33477061
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgatagc 626
| |||||||| |||||||| || || ||||||||||| ||||||||||||||||||||
Sbjct: 33477062 aaggcaaagaagagcttcccaaagagcggaccccatgactggtagccactgttgatagc 33477120
Score = 135 bits (68), Expect = 1e-028
Identities = 236/292 (80%)
Strand = Plus / Plus
Query: 1027 agtgggatagatgtaattggataaacaatggtgttgatgtatgccagtctctccagaagc 1086
||||| || ||||| | |||||||| | ||||||||||||| || | ||||||||| | |
Sbjct: 33477603 agtggaatcgatgtgagtggataaatagtggtgttgatgtaagcaaatctctccaggaac 33477662
Query: 1087 tttagccttccattgtaaccataccagataggacagtgtctgctaagtagaatttcaact 1146
|| |||| ||| ||| |||||||| || ||||| || ||||||| |||||||| ||
Sbjct: 33477663 ttaagccgtcctccgtacccataccatatgggacaatgcctgctaaaaagaatttccaca 33477722
Query: 1147 gaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattggagcagaa 1206
|||||||||||||| || | ||| ||||| |||||||| |||||||||||||| |||||
Sbjct: 33477723 gaaccaagagcccaccgaagcacctggttcagacgatccgaaagattaattggggcagac 33477782
Query: 1207 cccttgaagcaaggccgaagtggcatgcagtagatggatatccaacctcttgcatgcatc 1266
|||||||| || || |||||||||||||| || ||| || | ||||||||||
Sbjct: 33477783 cccttgaatgctggtcgcttaggcatgcagtagattgaccgccagccacgtgcatgcatc 33477842
Query: 1267 ttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatct 1318
||||| ||||| | ||||||||| |||||||| ||||| |||||||| ||||
Sbjct: 33477843 ttgaatccagtgagaatatcttctgtaacagaaccatagatccatccaatct 33477894
Score = 109 bits (55), Expect = 8e-021
Identities = 124/147 (84%)
Strand = Plus / Minus
Query: 746 cctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgga 805
|||||||||| || |||||| |||| ||||| || |||| || || | || |||||||
Sbjct: 34878437 cctttgatgtcacagtgaagcttgtatcgataccagctatgaccttgagaagtccttgga 34878378
Query: 806 acacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccacc 865
|||||||||||||||||| |||| || |||||||||||||||||||| || |||||||
Sbjct: 34878377 acacagcaaagagatgtgaagagacacctccaatgacccaaaactgctcgttcctccacc 34878318
Query: 866 aatcctcaatgccaacaccactccatc 892
|||| || ||||| |||||||||||||
Sbjct: 34878317 aatcatcgatgcctacaccactccatc 34878291
Score = 99.6 bits (50), Expect = 8e-018
Identities = 167/206 (81%)
Strand = Plus / Plus
Query: 685 atcagaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggtt 744
|||||||| |||||||||||||||| || |||||||| ||||| || || ||||| |
Sbjct: 33477179 atcagaagggttgtccacttgaacatgtagagctcagcgaaatcgccttcttcatcagag 33477238
Query: 745 gcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgg 804
|||||||| ||||| |||||| | || || || || || ||||| || | ||||| |||
Sbjct: 33477239 gcctttgaggtgacagtgaagctggtatcaattccagcaagcaccttcagcagaccctgg 33477298
Query: 805 aacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccac 864
|| || ||||| ||||| || || | || ||||| ||||||||||||||||| ||||||
Sbjct: 33477299 aagaccgcaaatagatgagcggaaatacctccaataacccaaaactgctcattcctccac 33477358
Query: 865 caatcctcaatgccaacaccactcca 890
|| || || |||||||||||||||||
Sbjct: 33477359 cattcatcgatgccaacaccactcca 33477384
Score = 79.8 bits (40), Expect = 8e-012
Identities = 97/116 (83%)
Strand = Plus / Plus
Query: 2447 tcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggacagg 2506
|||||||| ||||| || ||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 33479865 tcatcagacacatagcaagataccttatcaacagggtaatccacagcaaggatggagagc 33479924
Query: 2507 acagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaa 2562
||||| ||| |||| | ||||||||||| || | |||||||| ||||| |||||
Sbjct: 33479925 acagtattggcagtgacaagaggaggttctttcataggatccacagtactgacaaa 33479980
Score = 71.9 bits (36), Expect = 2e-009
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 2621 ctatcgaggtaagtttcacggttgataggataccactttgggaactgatctagaagccaa 2680
||||| |||||||||||||||||||| || ||||||| ||||||||||| |||| |||
Sbjct: 33480132 ctatccaggtaagtttcacggttgattggggaccacttggggaactgatccagaatccag 33480191
Query: 2681 gacaaagcaaaccaaa 2696
|| | |||||||||||
Sbjct: 33480192 gatagagcaaaccaaa 33480207
Score = 60.0 bits (30), Expect = 7e-006
Identities = 114/142 (80%)
Strand = Plus / Minus
Query: 1811 gcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagtt 1870
|||||||||||||| ||| || ||||| ||||||||||| ||||| ||||| ||| |
Sbjct: 34876981 gcatatcgatcatgacggtcaatgccatcgaatctttgtgggaactgcacataacaaact 34876922
Query: 1871 ttccttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgcta 1930
||| |||||| ||||||||||| |||||||| || || | | ||| |||||| |
Sbjct: 34876921 ttctttcctaccaagggatccatcataaaacacattgcttcctttatagccttgctgttg 34876862
Query: 1931 ttgaagtagtgatcacaatcca 1952
|||| |||||||||||||||||
Sbjct: 34876861 ttgatgtagtgatcacaatcca 34876840
Score = 56.0 bits (28), Expect = 1e-004
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 2645 ataggataccactttgggaactgatctagaagccaagaca 2684
|||||| ||||||||||||||||||| |||| ||||||||
Sbjct: 34875775 ataggaaaccactttgggaactgatcaagaatccaagaca 34875736
Score = 54.0 bits (27), Expect = 4e-004
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 1885 tggatccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatc 1944
||||||||| | ||| ||||||||||||| ||||||||||| | |||| |||||||||
Sbjct: 33479048 tggatccataaggaagcacatagcctctcggagagctttgctattgttgatgtagtgatc 33479107
Query: 1945 aca 1947
|||
Sbjct: 33479108 aca 33479110
Score = 50.1 bits (25), Expect = 0.007
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgatt 607
|||||||| | |||||||||||||||||| || || || ||||||||||
Sbjct: 34878621 atcacccaaaatgcaaagaacagcttcccaaagagcggcccccatgatt 34878573
Score = 48.1 bits (24), Expect = 0.027
Identities = 111/140 (79%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||| ||| ||||||| || | |||||||| || |||||||| |||
Sbjct: 34876130 ttgcagaaaggaacccacttctttgcaaattcagatgtttcagacagtgcttcaaatgtc 34876071
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | || |||||||||||||| || || || ||||| || || ||||| ||
Sbjct: 34876070 agcatggcagccccatcatcagaaacatagcaagagaccttgtcgaccggataatctacc 34876011
Query: 2492 gcaagaatggacaggacagt 2511
||||| || ||||| |||||
Sbjct: 34876010 gcaaggatagacagaacagt 34875991
Score = 40.1 bits (20), Expect = 6.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1800 tgttccggtttgcatatcgatcat 1823
|||||| |||||||||||||||||
Sbjct: 33478963 tgttcctgtttgcatatcgatcat 33478986
>dbj|AK058615.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-B02, full
insert sequence
Length = 856
Score = 137 bits (69), Expect = 4e-029
Identities = 562/727 (77%)
Strand = Plus / Minus
Query: 1970 ccattcgtcaggacagctgatacgcgaatcaaagcattcatggcaccagccttcttgtgg 2029
||||| || |||||||||||||| |||| | |||||||| ||||||||||| || |||
Sbjct: 834 ccattagtaaggacagctgatacacgaacaagtgcattcatagcaccagcctttttatgg 775
Query: 2030 tgctggaagcctggcctcttttcacgagaaacataaacaagccgtggcaactcattccca 2089
|| ||||| || || | || |||||||| ||||| || | || || | |||||| ||
Sbjct: 774 tgttggaatccaggacgtttctcacgagacacatagactaaacgaggaagctcattgcct 715
Query: 2090 tccgtgtcaagcccaccactgtggcccaagaatacttggatcattccnggatgatctcta 2149
|| || ||||| || ||||| || || | ||| || || |||||||| ||||| |||||
Sbjct: 714 tcggtatcaaggcctccactatgaccaaggaaaacctgaatcattccaggatggtctctg 655
Query: 2150 gggttattcccaggccanggagtgccatcagccatggtccagccctcctcaggtattttt 2209
| || || |||||||| || |||||||| ||| |||| || |||||||| | |||
Sbjct: 654 gtattgttaccaggccaaggtgtgccatcttgcataatccatccttcctcaggaactttc 595
Query: 2210 tgcgcttttgcaacaagggcatcgatccgtactttgaactcttcatactccctcttcata 2269
|| || || || || || |||| | || ||||| || |||||||| |||||||||||
Sbjct: 594 tgtgccttggcgacgagagcattaacacgaactttaaattcttcatattccctcttcatg 535
Query: 2270 gcccgcctttctttcacaaaagaaggttgtattttgtcctttaggtaatctatctttcga 2329
|| || | ||||| |||||||||| || | |||||| || | |||||| || || |
Sbjct: 534 gcacgacgatctttaacaaaagaagcctgaactttgtctttcaagtaatcaattttctgt 475
Query: 2330 gcaaagtaaaactctggagccctaggttcaatgttgtgtttcttgcaaaagggaacccat 2389
|||||||| |||||||||| || ||||| ||| ||| || || || || || ||||||
Sbjct: 474 gcaaagtaccactctggagctctgggttctatgctgtactttttacagaacggtacccat 415
Query: 2390 ttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaaccgtca 2449
|| || ||||| |||| || |||| || || ||||| || ||||| || | || |||
Sbjct: 414 tttctagcaaattctgaagtctcagcaagcgcatcaaatgttaacattgcagctccatca 355
Query: 2450 tcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggacaggaca 2509
||||| ||||| || ||||| || ||||||||||||||||||||||| ||||| || |||
Sbjct: 354 tcagacacatagcaagataccttatcaacagggtaatccacagcaaggatggagagcaca 295
Query: 2510 gtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaagacatcg 2569
|| ||| |||| | ||||||||||| || | |||||||| ||||| ||||| | ||
Sbjct: 294 gtattggcagtgacaagaggaggttctttcataggatccacagtactgacaaaaatgtca 235
Query: 2570 attggagccaactgggatggctcaccctccctatcatatctcaatgcaagtctatcgagg 2629
| |||||||| || ||||| ||||| |||| ||||| || || || || ||||| |||
Sbjct: 234 acaggagccaattgagatggttcaccttcccggtcataccttaaagccagcctatccagg 175
Query: 2630 taagtttcacggttgataggataccactttgggaactgatctagaagccaagacaaagca 2689
||||||||||||||||| || ||||||| ||||||||||| |||| ||| || | ||||
Sbjct: 174 taagtttcacggttgattggggaccacttggggaactgatccagaatccaggatagagca 115
Query: 2690 aaccaaa 2696
|||||||
Sbjct: 114 aaccaaa 108
>gb|AU096339.1|AU096339 AU096339 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S13532, mRNA sequence
Length = 714
Score = 125 bits (63), Expect = 1e-025
Identities = 132/155 (85%)
Strand = Plus / Minus
Query: 415 ttctgggtaggggatatgaaggggtcgatcttcacccacagcagcgagaatatggaagca 474
||||| ||||| || ||||| || |||||||| |||||||| || ||||| || || ||
Sbjct: 237 ttctgagtaggcgaaatgaaaggatcgatcttgacccacagaagggagaagatcgacgcg 178
Query: 475 agaaggacggaccaaacaatgacgatggtcggtgtgcggttctgcttccccatgagaccc 534
|| |||| ||||| || |||||||||||||| |||||||||||| | ||||||||||||
Sbjct: 177 aggaggatcgaccagacgatgacgatggtcggagtgcggttctgcctgcccatgagaccc 118
Query: 535 ttcaggaaagggtagaggtggaggatcacccagat 569
|| ||||| |||||||| |||||||||||||||||
Sbjct: 117 ttgaggaaggggtagagatggaggatcacccagat 83
>gb|CA999072.1|CA999072 S234M_G06 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 644
Score = 117 bits (59), Expect = 3e-023
Identities = 167/203 (82%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||| |||||||||||||||| || ||||||||||| || ||||| ||||| | |||
Sbjct: 546 agaagcgttgtccacttgaacatgtagagctcagcaaagtcgccatcttcatcagaagcc 487
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
||||| ||||| ||||| || |||||||| || || ||||| || | |||||| |||||
Sbjct: 486 tttgaggtgacagtgaaattggtgtcgataccagcaagcaccttgaggagaccctggaag 427
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|| ||||| ||||| ||||| | || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 426 acggcaaaaagatgcgcagatatacctccaataacccagaactgttcattcctccaccac 367
Query: 868 tcctcaatgccaacaccactcca 890
|| || |||||||||||||||||
Sbjct: 366 tcatcgatgccaacaccactcca 344
Score = 79.8 bits (40), Expect = 8e-012
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||||||||| |||||||| ||||| || | ||||||||| |||||||| ||||||||
Sbjct: 99 agaatttcaacagaaccaagtgcccaccgaagcacttggttaagacgatctgaaagattg 40
Query: 1195 attggagcagaacccttgaa 1214
|| |||||||| ||||||||
Sbjct: 39 ataggagcagaccccttgaa 20
Score = 44.1 bits (22), Expect = 0.42
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 598 ccccatgattggtagccactgttgat 623
||||||||||||||||| ||||||||
Sbjct: 636 ccccatgattggtagccgctgttgat 611
Score = 40.1 bits (20), Expect = 6.5
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctcca 1081
||||| ||||| | |||||||| | ||||||||||||| || | ||||||||
Sbjct: 204 gggatcgatgtcaatggataaatagtggtgttgatgtaggcaaatctctcca 153
>dbj|AK062007.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-E01, full
insert sequence
Length = 1241
Score = 117 bits (59), Expect = 3e-023
Identities = 167/203 (82%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||| |||||||||||||||| || ||||||||||| || ||||| ||||| | |||
Sbjct: 662 agaagcgttgtccacttgaacatgtagagctcagcaaagtcgccatcttcatcagaagcc 603
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
||||| ||||| ||||| || |||||||| || || ||||| || | |||||| |||||
Sbjct: 602 tttgaggtgacagtgaaattggtgtcgataccagcaagcaccttgaggagaccctggaag 543
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|| ||||| ||||| ||||| | || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 542 acggcaaaaagatgcgcagatatacctccaataacccagaactgttcattcctccaccac 483
Query: 868 tcctcaatgccaacaccactcca 890
|| || |||||||||||||||||
Sbjct: 482 tcatcgatgccaacaccactcca 460
Score = 103 bits (52), Expect = 5e-019
Identities = 145/176 (82%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || ||||| ||||||| | |||||||| |||||||||||
Sbjct: 902 acccacagcaatgagaagatcgaagccagaaggattgcccaaacaacaacgatggtcgga 843
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|||||||| ||| ||||| |||||||| ||||| ||||| | ||||| |||||||||
Sbjct: 842 gtgcggttttgccgacccataagacccttgaggaaggggtacaagtggacaatcacccag 783
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgat 623
| |||||||| ||||| || || || || ||||||||||||||||| ||||||||
Sbjct: 782 aaggcaaagaagagcttgccaaagagcggtccccatgattggtagccgctgttgat 727
Score = 95.6 bits (48), Expect = 1e-016
Identities = 171/212 (80%)
Strand = Plus / Minus
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||||||||| |||||||| ||||| || | ||||||||| |||||||| ||||||||
Sbjct: 215 agaatttcaacagaaccaagtgcccaccgaagcacttggttaagacgatctgaaagattg 156
Query: 1195 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaacct 1254
|| |||||||| |||||||| || || |||||||||||||| ||| |||| |||
Sbjct: 155 ataggagcagaccccttgaaagctgggcgcttgggcatgcagtagattgatctccagcct 96
Query: 1255 cttgcatgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccg 1314
| |||||||||||||| ||||| | ||||||||| || || || || || ||||| ||
Sbjct: 95 cgcgcatgcatcttgaatccagtgagaatatcttctgtcacggaaccgtagatccaccca 36
Query: 1315 atctctttcccccattctgttttatcctcata 1346
||||| | |||||||| || || ||||||||
Sbjct: 35 atctcagttccccattcggtcttgtcctcata 4
Score = 40.1 bits (20), Expect = 6.5
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctcca 1081
||||| ||||| | |||||||| | ||||||||||||| || | ||||||||
Sbjct: 320 gggatcgatgtcaatggataaatagtggtgttgatgtaggcaaatctctcca 269
>dbj|AP003837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1559_F09
Length = 87792
Score = 117 bits (59), Expect = 3e-023
Identities = 167/203 (82%)
Strand = Plus / Plus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||| |||||||||||||||| || ||||||||||| || ||||| ||||| | |||
Sbjct: 60188 agaagcgttgtccacttgaacatgtagagctcagcaaagtcgccatcttcatcagaagcc 60247
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
||||| ||||| ||||| || |||||||| || || ||||| || | |||||| |||||
Sbjct: 60248 tttgaggtgacagtgaaattggtgtcgataccagcaagcaccttgaggagaccctggaag 60307
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|| ||||| ||||| ||||| | || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 60308 acggcaaaaagatgcgcagatatacctccaataacccagaactgttcattcctccaccac 60367
Query: 868 tcctcaatgccaacaccactcca 890
|| || |||||||||||||||||
Sbjct: 60368 tcatcgatgccaacaccactcca 60390
Score = 103 bits (52), Expect = 5e-019
Identities = 145/176 (82%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || ||||| ||||||| | |||||||| |||||||||||
Sbjct: 59948 acccacagcaatgagaagatcgaagccagaaggattgcccaaacaacaacgatggtcgga 60007
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|||||||| ||| ||||| |||||||| ||||| ||||| | ||||| |||||||||
Sbjct: 60008 gtgcggttttgccgacccataagacccttgaggaaggggtacaagtggacaatcacccag 60067
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgat 623
| |||||||| ||||| || || || || ||||||||||||||||| ||||||||
Sbjct: 60068 aaggcaaagaagagcttgccaaagagcggtccccatgattggtagccgctgttgat 60123
Score = 97.6 bits (49), Expect = 3e-017
Identities = 97/113 (85%)
Strand = Plus / Plus
Query: 2609 ctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttgggaactga 2668
|||||||| || ||||| ||||| |||||||||||||| ||| ||||||| |||||||||
Sbjct: 62928 ctcaatgccagcctatcaaggtaggtttcacggttgattggaaaccacttcgggaactga 62987
Query: 2669 tctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagcca 2721
|| | | ||| |||||||||||||||| ||||| |||||||||| ||||||
Sbjct: 62988 tccaatatccaggacaaagcaaaccaaatctcacatataacagataaaagcca 63040
Score = 93.7 bits (47), Expect = 5e-016
Identities = 128/155 (82%)
Strand = Plus / Plus
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||||||||| |||||||| ||||| || | ||||||||| |||||||| ||||||||
Sbjct: 60717 agaatttcaacagaaccaagtgcccaccgaagcacttggttaagacgatctgaaagattg 60776
Query: 1195 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaacct 1254
|| |||||||| |||||||| || || |||||||||||||| ||| |||| |||
Sbjct: 60777 ataggagcagaccccttgaaagctgggcgcttgggcatgcagtagattgatctccagcct 60836
Query: 1255 cttgcatgcatcttgaaaccagttaaaatatcttc 1289
| |||||||||||||| ||||| | |||||||||
Sbjct: 60837 cgcgcatgcatcttgaatccagtgagaatatcttc 60871
Score = 73.8 bits (37), Expect = 5e-010
Identities = 139/173 (80%)
Strand = Plus / Plus
Query: 2423 tcaaaagtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacaggg 2482
|||||||||| ||| || | ||| || ||||| ||||| || || || ||||| || |||
Sbjct: 62651 tcaaaagtcagcattgcagcaccatcgtcagatacatagcaagagaccttgtccactggg 62710
Query: 2483 taatccacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagt 2542
||||| ||||||||||||||||| || || ||| |||||| |||||||||||||| |
Sbjct: 62711 taatcaacagcaagaatggacagcacggtattggcagtaacaagaggaggttccttcatg 62770
Query: 2543 ggatccactgtactaacaaagacatcgattggagccaactgggatggctcacc 2595
|| || |||||||| ||||| | || | | ||||||||| |||||||||||
Sbjct: 62771 gggtcgactgtactgacaaaaatgtcaacagcagccaactgagatggctcacc 62823
Score = 69.9 bits (35), Expect = 7e-009
Identities = 92/111 (82%)
Strand = Plus / Plus
Query: 2002 agcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaac 2061
||||||||||||||||||||||||||||||||| || || || | ||| |||||||| ||
Sbjct: 62034 agcattcatggcaccagccttcttgtggtgctgaaacccaggacgcttctcacgagatac 62093
Query: 2062 ataaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtg 2112
|| || || || || | |||||| || || || ||||| |||||||||||
Sbjct: 62094 gtagaccaggcggggaagctcattaccctcggtatcaaggccaccactgtg 62144
Score = 61.9 bits (31), Expect = 2e-006
Identities = 121/151 (80%)
Strand = Plus / Plus
Query: 1800 tgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaa 1859
|||||| ||| ||||||||||||| | || |||||||| || |||||||| |||||||
Sbjct: 61740 tgttcctgttcgcatatcgatcattcctatcaataccatcgaacctttgtgggaactgaa 61799
Query: 1860 catagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctctaagag 1919
|||| || |||||||||| ||||||||| | ||| |||||||| || | ||||
Sbjct: 61800 cataacagacactccttcctaggtttggatccataaggaagcacatagcttcccgcagag 61859
Query: 1920 ctttgctgctattgaagtagtgatcacaatc 1950
| |||||| | |||| |||||||||||||||
Sbjct: 61860 ccttgctgttgttgatgtagtgatcacaatc 61890
Score = 54.0 bits (27), Expect = 4e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1736 gttcccacataaacaggtccttgaatgccatctagaccc 1774
|||||||||||||| |||||||| |||||||| ||||||
Sbjct: 61515 gttcccacataaactggtccttggatgccatcaagaccc 61553
Score = 48.1 bits (24), Expect = 0.027
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 1462 agactggccaaagcgtttctccaagctcttctgagacataagcagtga 1509
|||||||||||| | |||||||||||| | ||||||||||| |||||
Sbjct: 61145 agactggccaaatctcttctccaagctcatttgagacataagaagtga 61192
Score = 40.1 bits (20), Expect = 6.5
Identities = 44/52 (84%)
Strand = Plus / Plus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctcca 1081
||||| ||||| | |||||||| | ||||||||||||| || | ||||||||
Sbjct: 60612 gggatcgatgtcaatggataaatagtggtgttgatgtaggcaaatctctcca 60663
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1136_A05
Length = 120823
Score = 117 bits (59), Expect = 3e-023
Identities = 167/203 (82%)
Strand = Plus / Plus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||| |||||||||||||||| || ||||||||||| || ||||| ||||| | |||
Sbjct: 27962 agaagcgttgtccacttgaacatgtagagctcagcaaagtcgccatcttcatcagaagcc 28021
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
||||| ||||| ||||| || |||||||| || || ||||| || | |||||| |||||
Sbjct: 28022 tttgaggtgacagtgaaattggtgtcgataccagcaagcaccttgaggagaccctggaag 28081
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|| ||||| ||||| ||||| | || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 28082 acggcaaaaagatgcgcagatatacctccaataacccagaactgttcattcctccaccac 28141
Query: 868 tcctcaatgccaacaccactcca 890
|| || |||||||||||||||||
Sbjct: 28142 tcatcgatgccaacaccactcca 28164
Score = 103 bits (52), Expect = 5e-019
Identities = 145/176 (82%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || ||||| ||||||| | |||||||| |||||||||||
Sbjct: 27722 acccacagcaatgagaagatcgaagccagaaggattgcccaaacaacaacgatggtcgga 27781
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|||||||| ||| ||||| |||||||| ||||| ||||| | ||||| |||||||||
Sbjct: 27782 gtgcggttttgccgacccataagacccttgaggaaggggtacaagtggacaatcacccag 27841
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgat 623
| |||||||| ||||| || || || || ||||||||||||||||| ||||||||
Sbjct: 27842 aaggcaaagaagagcttgccaaagagcggtccccatgattggtagccgctgttgat 27897
Score = 97.6 bits (49), Expect = 3e-017
Identities = 97/113 (85%)
Strand = Plus / Plus
Query: 2609 ctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttgggaactga 2668
|||||||| || ||||| ||||| |||||||||||||| ||| ||||||| |||||||||
Sbjct: 30702 ctcaatgccagcctatcaaggtaggtttcacggttgattggaaaccacttcgggaactga 30761
Query: 2669 tctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagcca 2721
|| | | ||| |||||||||||||||| ||||| |||||||||| ||||||
Sbjct: 30762 tccaatatccaggacaaagcaaaccaaatctcacatataacagataaaagcca 30814
Score = 93.7 bits (47), Expect = 5e-016
Identities = 128/155 (82%)
Strand = Plus / Plus
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||||||||| |||||||| ||||| || | ||||||||| |||||||| ||||||||
Sbjct: 28491 agaatttcaacagaaccaagtgcccaccgaagcacttggttaagacgatctgaaagattg 28550
Query: 1195 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaacct 1254
|| |||||||| |||||||| || || |||||||||||||| ||| |||| |||
Sbjct: 28551 ataggagcagaccccttgaaagctgggcgcttgggcatgcagtagattgatctccagcct 28610
Query: 1255 cttgcatgcatcttgaaaccagttaaaatatcttc 1289
| |||||||||||||| ||||| | |||||||||
Sbjct: 28611 cgcgcatgcatcttgaatccagtgagaatatcttc 28645
Score = 73.8 bits (37), Expect = 5e-010
Identities = 139/173 (80%)
Strand = Plus / Plus
Query: 2423 tcaaaagtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacaggg 2482
|||||||||| ||| || | ||| || ||||| ||||| || || || ||||| || |||
Sbjct: 30425 tcaaaagtcagcattgcagcaccatcgtcagatacatagcaagagaccttgtccactggg 30484
Query: 2483 taatccacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagt 2542
||||| ||||||||||||||||| || || ||| |||||| |||||||||||||| |
Sbjct: 30485 taatcaacagcaagaatggacagcacggtattggcagtaacaagaggaggttccttcatg 30544
Query: 2543 ggatccactgtactaacaaagacatcgattggagccaactgggatggctcacc 2595
|| || |||||||| ||||| | || | | ||||||||| |||||||||||
Sbjct: 30545 gggtcgactgtactgacaaaaatgtcaacagcagccaactgagatggctcacc 30597
Score = 69.9 bits (35), Expect = 7e-009
Identities = 92/111 (82%)
Strand = Plus / Plus
Query: 2002 agcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaac 2061
||||||||||||||||||||||||||||||||| || || || | ||| |||||||| ||
Sbjct: 29808 agcattcatggcaccagccttcttgtggtgctgaaacccaggacgcttctcacgagatac 29867
Query: 2062 ataaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtg 2112
|| || || || || | |||||| || || || ||||| |||||||||||
Sbjct: 29868 gtagaccaggcggggaagctcattaccctcggtatcaaggccaccactgtg 29918
Score = 61.9 bits (31), Expect = 2e-006
Identities = 121/151 (80%)
Strand = Plus / Plus
Query: 1800 tgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaa 1859
|||||| ||| ||||||||||||| | || |||||||| || |||||||| |||||||
Sbjct: 29514 tgttcctgttcgcatatcgatcattcctatcaataccatcgaacctttgtgggaactgaa 29573
Query: 1860 catagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctctaagag 1919
|||| || |||||||||| ||||||||| | ||| |||||||| || | ||||
Sbjct: 29574 cataacagacactccttcctaggtttggatccataaggaagcacatagcttcccgcagag 29633
Query: 1920 ctttgctgctattgaagtagtgatcacaatc 1950
| |||||| | |||| |||||||||||||||
Sbjct: 29634 ccttgctgttgttgatgtagtgatcacaatc 29664
Score = 54.0 bits (27), Expect = 4e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1736 gttcccacataaacaggtccttgaatgccatctagaccc 1774
|||||||||||||| |||||||| |||||||| ||||||
Sbjct: 29289 gttcccacataaactggtccttggatgccatcaagaccc 29327
Score = 48.1 bits (24), Expect = 0.027
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 1462 agactggccaaagcgtttctccaagctcttctgagacataagcagtga 1509
|||||||||||| | |||||||||||| | ||||||||||| |||||
Sbjct: 28919 agactggccaaatctcttctccaagctcatttgagacataagaagtga 28966
Score = 40.1 bits (20), Expect = 6.5
Identities = 44/52 (84%)
Strand = Plus / Plus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctcca 1081
||||| ||||| | |||||||| | ||||||||||||| || | ||||||||
Sbjct: 28386 gggatcgatgtcaatggataaatagtggtgttgatgtaggcaaatctctcca 28437
>gb|AACV01015403.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015403, whole
genome shotgun sequence
Length = 31014
Score = 117 bits (59), Expect = 3e-023
Identities = 167/203 (82%)
Strand = Plus / Plus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||| |||||||||||||||| || ||||||||||| || ||||| ||||| | |||
Sbjct: 15257 agaagcgttgtccacttgaacatgtagagctcagcaaagtcgccatcttcatcagaagcc 15316
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
||||| ||||| ||||| || |||||||| || || ||||| || | |||||| |||||
Sbjct: 15317 tttgaggtgacagtgaaattggtgtcgataccagcaagcaccttgaggagaccctggaag 15376
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|| ||||| ||||| ||||| | || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 15377 acggcaaaaagatgcgcagatatacctccaataacccagaactgttcattcctccaccac 15436
Query: 868 tcctcaatgccaacaccactcca 890
|| || |||||||||||||||||
Sbjct: 15437 tcatcgatgccaacaccactcca 15459
Score = 103 bits (52), Expect = 5e-019
Identities = 145/176 (82%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || ||||| ||||||| | |||||||| |||||||||||
Sbjct: 15017 acccacagcaatgagaagatcgaagccagaaggattgcccaaacaacaacgatggtcgga 15076
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|||||||| ||| ||||| |||||||| ||||| ||||| | ||||| |||||||||
Sbjct: 15077 gtgcggttttgccgacccataagacccttgaggaaggggtacaagtggacaatcacccag 15136
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgat 623
| |||||||| ||||| || || || || ||||||||||||||||| ||||||||
Sbjct: 15137 aaggcaaagaagagcttgccaaagagcggtccccatgattggtagccgctgttgat 15192
Score = 97.6 bits (49), Expect = 3e-017
Identities = 97/113 (85%)
Strand = Plus / Plus
Query: 2609 ctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttgggaactga 2668
|||||||| || ||||| ||||| |||||||||||||| ||| ||||||| |||||||||
Sbjct: 17997 ctcaatgccagcctatcaaggtaggtttcacggttgattggaaaccacttcgggaactga 18056
Query: 2669 tctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagcca 2721
|| | | ||| |||||||||||||||| ||||| |||||||||| ||||||
Sbjct: 18057 tccaatatccaggacaaagcaaaccaaatctcacatataacagataaaagcca 18109
Score = 93.7 bits (47), Expect = 5e-016
Identities = 128/155 (82%)
Strand = Plus / Plus
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||||||||| |||||||| ||||| || | ||||||||| |||||||| ||||||||
Sbjct: 15786 agaatttcaacagaaccaagtgcccaccgaagcacttggttaagacgatctgaaagattg 15845
Query: 1195 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaacct 1254
|| |||||||| |||||||| || || |||||||||||||| ||| |||| |||
Sbjct: 15846 ataggagcagaccccttgaaagctgggcgcttgggcatgcagtagattgatctccagcct 15905
Query: 1255 cttgcatgcatcttgaaaccagttaaaatatcttc 1289
| |||||||||||||| ||||| | |||||||||
Sbjct: 15906 cgcgcatgcatcttgaatccagtgagaatatcttc 15940
Score = 73.8 bits (37), Expect = 5e-010
Identities = 139/173 (80%)
Strand = Plus / Plus
Query: 2423 tcaaaagtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacaggg 2482
|||||||||| ||| || | ||| || ||||| ||||| || || || ||||| || |||
Sbjct: 17720 tcaaaagtcagcattgcagcaccatcgtcagatacatagcaagagaccttgtccactggg 17779
Query: 2483 taatccacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagt 2542
||||| ||||||||||||||||| || || ||| |||||| |||||||||||||| |
Sbjct: 17780 taatcaacagcaagaatggacagcacggtattggcagtaacaagaggaggttccttcatg 17839
Query: 2543 ggatccactgtactaacaaagacatcgattggagccaactgggatggctcacc 2595
|| || |||||||| ||||| | || | | ||||||||| |||||||||||
Sbjct: 17840 gggtcgactgtactgacaaaaatgtcaacagcagccaactgagatggctcacc 17892
Score = 69.9 bits (35), Expect = 7e-009
Identities = 92/111 (82%)
Strand = Plus / Plus
Query: 2002 agcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaac 2061
||||||||||||||||||||||||||||||||| || || || | ||| |||||||| ||
Sbjct: 17103 agcattcatggcaccagccttcttgtggtgctgaaacccaggacgcttctcacgagatac 17162
Query: 2062 ataaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtg 2112
|| || || || || | |||||| || || || ||||| |||||||||||
Sbjct: 17163 gtagaccaggcggggaagctcattaccctcggtatcaaggccaccactgtg 17213
Score = 61.9 bits (31), Expect = 2e-006
Identities = 121/151 (80%)
Strand = Plus / Plus
Query: 1800 tgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaa 1859
|||||| ||| ||||||||||||| | || |||||||| || |||||||| |||||||
Sbjct: 16809 tgttcctgttcgcatatcgatcattcctatcaataccatcgaacctttgtgggaactgaa 16868
Query: 1860 catagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctctaagag 1919
|||| || |||||||||| ||||||||| | ||| |||||||| || | ||||
Sbjct: 16869 cataacagacactccttcctaggtttggatccataaggaagcacatagcttcccgcagag 16928
Query: 1920 ctttgctgctattgaagtagtgatcacaatc 1950
| |||||| | |||| |||||||||||||||
Sbjct: 16929 ccttgctgttgttgatgtagtgatcacaatc 16959
Score = 54.0 bits (27), Expect = 4e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1736 gttcccacataaacaggtccttgaatgccatctagaccc 1774
|||||||||||||| |||||||| |||||||| ||||||
Sbjct: 16584 gttcccacataaactggtccttggatgccatcaagaccc 16622
Score = 48.1 bits (24), Expect = 0.027
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 1462 agactggccaaagcgtttctccaagctcttctgagacataagcagtga 1509
|||||||||||| | |||||||||||| | ||||||||||| |||||
Sbjct: 16214 agactggccaaatctcttctccaagctcatttgagacataagaagtga 16261
Score = 40.1 bits (20), Expect = 6.5
Identities = 44/52 (84%)
Strand = Plus / Plus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctcca 1081
||||| ||||| | |||||||| | ||||||||||||| || | ||||||||
Sbjct: 15681 gggatcgatgtcaatggataaatagtggtgttgatgtaggcaaatctctcca 15732
>ref|NT_079879.2| Oryza sativa (japonica cultivar-group)
Length = 11570172
Score = 117 bits (59), Expect = 3e-023
Identities = 167/203 (82%)
Strand = Plus / Plus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||| |||||||||||||||| || ||||||||||| || ||||| ||||| | |||
Sbjct: 5841586 agaagcgttgtccacttgaacatgtagagctcagcaaagtcgccatcttcatcagaagcc 5841645
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
||||| ||||| ||||| || |||||||| || || ||||| || | |||||| |||||
Sbjct: 5841646 tttgaggtgacagtgaaattggtgtcgataccagcaagcaccttgaggagaccctggaag 5841705
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|| ||||| ||||| ||||| | || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 5841706 acggcaaaaagatgcgcagatatacctccaataacccagaactgttcattcctccaccac 5841765
Query: 868 tcctcaatgccaacaccactcca 890
|| || |||||||||||||||||
Sbjct: 5841766 tcatcgatgccaacaccactcca 5841788
Score = 103 bits (52), Expect = 5e-019
Identities = 145/176 (82%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || ||||| ||||||| | |||||||| |||||||||||
Sbjct: 5841346 acccacagcaatgagaagatcgaagccagaaggattgcccaaacaacaacgatggtcgga 5841405
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|||||||| ||| ||||| |||||||| ||||| ||||| | ||||| |||||||||
Sbjct: 5841406 gtgcggttttgccgacccataagacccttgaggaaggggtacaagtggacaatcacccag 5841465
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgat 623
| |||||||| ||||| || || || || ||||||||||||||||| ||||||||
Sbjct: 5841466 aaggcaaagaagagcttgccaaagagcggtccccatgattggtagccgctgttgat 5841521
Score = 97.6 bits (49), Expect = 3e-017
Identities = 97/113 (85%)
Strand = Plus / Plus
Query: 2609 ctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttgggaactga 2668
|||||||| || ||||| ||||| |||||||||||||| ||| ||||||| |||||||||
Sbjct: 5844326 ctcaatgccagcctatcaaggtaggtttcacggttgattggaaaccacttcgggaactga 5844385
Query: 2669 tctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagcca 2721
|| | | ||| |||||||||||||||| ||||| |||||||||| ||||||
Sbjct: 5844386 tccaatatccaggacaaagcaaaccaaatctcacatataacagataaaagcca 5844438
Score = 93.7 bits (47), Expect = 5e-016
Identities = 128/155 (82%)
Strand = Plus / Plus
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||||||||| |||||||| ||||| || | ||||||||| |||||||| ||||||||
Sbjct: 5842115 agaatttcaacagaaccaagtgcccaccgaagcacttggttaagacgatctgaaagattg 5842174
Query: 1195 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaacct 1254
|| |||||||| |||||||| || || |||||||||||||| ||| |||| |||
Sbjct: 5842175 ataggagcagaccccttgaaagctgggcgcttgggcatgcagtagattgatctccagcct 5842234
Query: 1255 cttgcatgcatcttgaaaccagttaaaatatcttc 1289
| |||||||||||||| ||||| | |||||||||
Sbjct: 5842235 cgcgcatgcatcttgaatccagtgagaatatcttc 5842269
Score = 75.8 bits (38), Expect = 1e-010
Identities = 80/94 (85%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| ||||| |||||||||| ||| || |||||||||||||||||||||||
Sbjct: 8489049 ccttggaatacagcgaagagatgtgaagaaacacctccaatgacccaaaactgctcattc 8488990
Query: 859 ctccaccaatcctcaatgccaacaccactccatc 892
|||||||| || || ||| | |||||||||||||
Sbjct: 8488989 ctccaccagtcatcgatggccacaccactccatc 8488956
Score = 73.8 bits (37), Expect = 5e-010
Identities = 139/173 (80%)
Strand = Plus / Plus
Query: 2423 tcaaaagtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacaggg 2482
|||||||||| ||| || | ||| || ||||| ||||| || || || ||||| || |||
Sbjct: 5844049 tcaaaagtcagcattgcagcaccatcgtcagatacatagcaagagaccttgtccactggg 5844108
Query: 2483 taatccacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagt 2542
||||| ||||||||||||||||| || || ||| |||||| |||||||||||||| |
Sbjct: 5844109 taatcaacagcaagaatggacagcacggtattggcagtaacaagaggaggttccttcatg 5844168
Query: 2543 ggatccactgtactaacaaagacatcgattggagccaactgggatggctcacc 2595
|| || |||||||| ||||| | || | | ||||||||| |||||||||||
Sbjct: 5844169 gggtcgactgtactgacaaaaatgtcaacagcagccaactgagatggctcacc 5844221
Score = 69.9 bits (35), Expect = 7e-009
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactg 618
|||||||||| ||||||||| ||||||||||| || || |||||||||| || ||| ||
Sbjct: 8489286 atcacccagaatgcaaagaagagcttcccgaacagaggtccccatgattcatatccattg 8489227
Query: 619 ttgatagcatacgacactccagc 641
|||||||||| || ||||||||
Sbjct: 8489226 ttgatagcattagaaactccagc 8489204
Score = 69.9 bits (35), Expect = 7e-009
Identities = 92/111 (82%)
Strand = Plus / Plus
Query: 2002 agcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaac 2061
||||||||||||||||||||||||||||||||| || || || | ||| |||||||| ||
Sbjct: 5843432 agcattcatggcaccagccttcttgtggtgctgaaacccaggacgcttctcacgagatac 5843491
Query: 2062 ataaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtg 2112
|| || || || || | |||||| || || || ||||| |||||||||||
Sbjct: 5843492 gtagaccaggcggggaagctcattaccctcggtatcaaggccaccactgtg 5843542
Score = 67.9 bits (34), Expect = 3e-008
Identities = 154/194 (79%)
Strand = Plus / Minus
Query: 2384 acccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaa 2443
||||||||| ||||||| || | ||||| || || |||||||| || | ||| || | |
Sbjct: 8486829 acccatttctttgcaaattcagatgtttctgacagtgcttcaaatgtgagcattgcagca 8486770
Query: 2444 ccgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggac 2503
|| |||||||||||||| || || || || ||||| ||||||||||||| ||| |||||
Sbjct: 8486769 ccatcatcagaaacatagcaggaaaccttttcaactgggtaatccacagaaaggatggaa 8486710
Query: 2504 aggacagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaag 2563
||||| ||||| | || | || ||||||||||| |||||| |||||||| ||||||
Sbjct: 8486709 aggacggtgtttgctgtgactaagggaggttccttcgatggatcaactgtactgacaaag 8486650
Query: 2564 acatcgattggagc 2577
| |||| ||||||
Sbjct: 8486649 aagtcgactggagc 8486636
Score = 61.9 bits (31), Expect = 2e-006
Identities = 121/151 (80%)
Strand = Plus / Plus
Query: 1800 tgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaa 1859
|||||| ||| ||||||||||||| | || |||||||| || |||||||| |||||||
Sbjct: 5843138 tgttcctgttcgcatatcgatcattcctatcaataccatcgaacctttgtgggaactgaa 5843197
Query: 1860 catagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctctaagag 1919
|||| || |||||||||| ||||||||| | ||| |||||||| || | ||||
Sbjct: 5843198 cataacagacactccttcctaggtttggatccataaggaagcacatagcttcccgcagag 5843257
Query: 1920 ctttgctgctattgaagtagtgatcacaatc 1950
| |||||| | |||| |||||||||||||||
Sbjct: 5843258 ccttgctgttgttgatgtagtgatcacaatc 5843288
Score = 60.0 bits (30), Expect = 7e-006
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 1793 aagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtgga 1852
||||||| ||||||||| |||||||||||||| ||| ||||||||||| || || ||
Sbjct: 8487699 aagacaacgttccggttagcatatcgatcatgtcggtcaataccatcaaacctctgaggg 8487640
Query: 1853 aactgaacatagca 1866
||||| ||||||||
Sbjct: 8487639 aactgcacatagca 8487626
Score = 54.0 bits (27), Expect = 4e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1736 gttcccacataaacaggtccttgaatgccatctagaccc 1774
|||||||||||||| |||||||| |||||||| ||||||
Sbjct: 5842913 gttcccacataaactggtccttggatgccatcaagaccc 5842951
Score = 48.1 bits (24), Expect = 0.027
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 1462 agactggccaaagcgtttctccaagctcttctgagacataagcagtga 1509
|||||||||||| | |||||||||||| | ||||||||||| |||||
Sbjct: 5842543 agactggccaaatctcttctccaagctcatttgagacataagaagtga 5842590
Score = 44.1 bits (22), Expect = 0.42
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 1137 aatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaat 1196
||||||||| || ||||||||||| || | || |||| |||||||| ||||||||||
Sbjct: 8488630 aatttcaacagatccaagagcccaacgaaggacctggtgaagacgatccgaaagattaag 8488571
Query: 1197 tggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 8488570 aggtgcagaacctttgaa 8488553
Score = 44.1 bits (22), Expect = 0.42
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttc 2052
|||||||| |||||||||||||| || || | ||||||||||||||||
Sbjct: 8487390 gcattcatagcaccagccttcttatgatgattatagcctggcctcttttc 8487341
Score = 40.1 bits (20), Expect = 6.5
Identities = 44/52 (84%)
Strand = Plus / Plus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctcca 1081
||||| ||||| | |||||||| | ||||||||||||| || | ||||||||
Sbjct: 5842010 gggatcgatgtcaatggataaatagtggtgttgatgtaggcaaatctctcca 5842061
>gb|CH401220.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000057 genomic
scaffold, whole genome shotgun sequence
Length = 3236776
Score = 117 bits (59), Expect = 3e-023
Identities = 167/203 (82%)
Strand = Plus / Plus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||| |||||||||||||||| || ||||||||||| || ||||| ||||| | |||
Sbjct: 2980049 agaagcgttgtccacttgaacatgtagagctcagcaaagtcgccatcttcatcagaagcc 2980108
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
||||| ||||| ||||| || |||||||| || || ||||| || | |||||| |||||
Sbjct: 2980109 tttgaggtgacagtgaaattggtgtcgataccagcaagcaccttgaggagaccctggaag 2980168
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|| ||||| ||||| ||||| | || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 2980169 acggcaaaaagatgcgcagatatacctccaataacccagaactgttcattcctccaccac 2980228
Query: 868 tcctcaatgccaacaccactcca 890
|| || |||||||||||||||||
Sbjct: 2980229 tcatcgatgccaacaccactcca 2980251
Score = 103 bits (52), Expect = 5e-019
Identities = 145/176 (82%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || ||||| ||||||| | |||||||| |||||||||||
Sbjct: 2979809 acccacagcaatgagaagatcgaagccagaaggattgcccaaacaacaacgatggtcgga 2979868
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|||||||| ||| ||||| |||||||| ||||| ||||| | ||||| |||||||||
Sbjct: 2979869 gtgcggttttgccgacccataagacccttgaggaaggggtacaagtggacaatcacccag 2979928
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgat 623
| |||||||| ||||| || || || || ||||||||||||||||| ||||||||
Sbjct: 2979929 aaggcaaagaagagcttgccaaagagcggtccccatgattggtagccgctgttgat 2979984
Score = 97.6 bits (49), Expect = 3e-017
Identities = 97/113 (85%)
Strand = Plus / Plus
Query: 2609 ctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttgggaactga 2668
|||||||| || ||||| ||||| |||||||||||||| ||| ||||||| |||||||||
Sbjct: 2982789 ctcaatgccagcctatcaaggtaggtttcacggttgattggaaaccacttcgggaactga 2982848
Query: 2669 tctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagcca 2721
|| | | ||| |||||||||||||||| ||||| |||||||||| ||||||
Sbjct: 2982849 tccaatatccaggacaaagcaaaccaaatctcacatataacagataaaagcca 2982901
Score = 93.7 bits (47), Expect = 5e-016
Identities = 128/155 (82%)
Strand = Plus / Plus
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||||||||| |||||||| ||||| || | ||||||||| |||||||| ||||||||
Sbjct: 2980578 agaatttcaacagaaccaagtgcccaccgaagcacttggttaagacgatctgaaagattg 2980637
Query: 1195 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaacct 1254
|| |||||||| |||||||| || || |||||||||||||| ||| |||| |||
Sbjct: 2980638 ataggagcagaccccttgaaagctgggcgcttgggcatgcagtagattgatctccagcct 2980697
Query: 1255 cttgcatgcatcttgaaaccagttaaaatatcttc 1289
| |||||||||||||| ||||| | |||||||||
Sbjct: 2980698 cgcgcatgcatcttgaatccagtgagaatatcttc 2980732
Score = 73.8 bits (37), Expect = 5e-010
Identities = 139/173 (80%)
Strand = Plus / Plus
Query: 2423 tcaaaagtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacaggg 2482
|||||||||| ||| || | ||| || ||||| ||||| || || || ||||| || |||
Sbjct: 2982512 tcaaaagtcagcattgcagcaccatcgtcagatacatagcaagagaccttgtccactggg 2982571
Query: 2483 taatccacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagt 2542
||||| ||||||||||||||||| || || ||| |||||| |||||||||||||| |
Sbjct: 2982572 taatcaacagcaagaatggacagcacggtattggcagtaacaagaggaggttccttcatg 2982631
Query: 2543 ggatccactgtactaacaaagacatcgattggagccaactgggatggctcacc 2595
|| || |||||||| ||||| | || | | ||||||||| |||||||||||
Sbjct: 2982632 gggtcgactgtactgacaaaaatgtcaacagcagccaactgagatggctcacc 2982684
Score = 69.9 bits (35), Expect = 7e-009
Identities = 92/111 (82%)
Strand = Plus / Plus
Query: 2002 agcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaac 2061
||||||||||||||||||||||||||||||||| || || || | ||| |||||||| ||
Sbjct: 2981895 agcattcatggcaccagccttcttgtggtgctgaaacccaggacgcttctcacgagatac 2981954
Query: 2062 ataaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtg 2112
|| || || || || | |||||| || || || ||||| |||||||||||
Sbjct: 2981955 gtagaccaggcggggaagctcattaccctcggtatcaaggccaccactgtg 2982005
Score = 61.9 bits (31), Expect = 2e-006
Identities = 121/151 (80%)
Strand = Plus / Plus
Query: 1800 tgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaa 1859
|||||| ||| ||||||||||||| | || |||||||| || |||||||| |||||||
Sbjct: 2981601 tgttcctgttcgcatatcgatcattcctatcaataccatcgaacctttgtgggaactgaa 2981660
Query: 1860 catagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctctaagag 1919
|||| || |||||||||| ||||||||| | ||| |||||||| || | ||||
Sbjct: 2981661 cataacagacactccttcctaggtttggatccataaggaagcacatagcttcccgcagag 2981720
Query: 1920 ctttgctgctattgaagtagtgatcacaatc 1950
| |||||| | |||| |||||||||||||||
Sbjct: 2981721 ccttgctgttgttgatgtagtgatcacaatc 2981751
Score = 54.0 bits (27), Expect = 4e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1736 gttcccacataaacaggtccttgaatgccatctagaccc 1774
|||||||||||||| |||||||| |||||||| ||||||
Sbjct: 2981376 gttcccacataaactggtccttggatgccatcaagaccc 2981414
Score = 48.1 bits (24), Expect = 0.027
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 1462 agactggccaaagcgtttctccaagctcttctgagacataagcagtga 1509
|||||||||||| | |||||||||||| | ||||||||||| |||||
Sbjct: 2981006 agactggccaaatctcttctccaagctcatttgagacataagaagtga 2981053
Score = 40.1 bits (20), Expect = 6.5
Identities = 44/52 (84%)
Strand = Plus / Plus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctcca 1081
||||| ||||| | |||||||| | ||||||||||||| || | ||||||||
Sbjct: 2980473 gggatcgatgtcaatggataaatagtggtgttgatgtaggcaaatctctcca 2980524
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 117 bits (59), Expect = 3e-023
Identities = 167/203 (82%)
Strand = Plus / Plus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||| |||||||||||||||| || ||||||||||| || ||||| ||||| | |||
Sbjct: 5796798 agaagcgttgtccacttgaacatgtagagctcagcaaagtcgccatcttcatcagaagcc 5796857
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
||||| ||||| ||||| || |||||||| || || ||||| || | |||||| |||||
Sbjct: 5796858 tttgaggtgacagtgaaattggtgtcgataccagcaagcaccttgaggagaccctggaag 5796917
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|| ||||| ||||| ||||| | || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 5796918 acggcaaaaagatgcgcagatatacctccaataacccagaactgttcattcctccaccac 5796977
Query: 868 tcctcaatgccaacaccactcca 890
|| || |||||||||||||||||
Sbjct: 5796978 tcatcgatgccaacaccactcca 5797000
Score = 103 bits (52), Expect = 5e-019
Identities = 145/176 (82%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || ||||| ||||||| | |||||||| |||||||||||
Sbjct: 5796558 acccacagcaatgagaagatcgaagccagaaggattgcccaaacaacaacgatggtcgga 5796617
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|||||||| ||| ||||| |||||||| ||||| ||||| | ||||| |||||||||
Sbjct: 5796618 gtgcggttttgccgacccataagacccttgaggaaggggtacaagtggacaatcacccag 5796677
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgat 623
| |||||||| ||||| || || || || ||||||||||||||||| ||||||||
Sbjct: 5796678 aaggcaaagaagagcttgccaaagagcggtccccatgattggtagccgctgttgat 5796733
Score = 97.6 bits (49), Expect = 3e-017
Identities = 97/113 (85%)
Strand = Plus / Plus
Query: 2609 ctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttgggaactga 2668
|||||||| || ||||| ||||| |||||||||||||| ||| ||||||| |||||||||
Sbjct: 5799538 ctcaatgccagcctatcaaggtaggtttcacggttgattggaaaccacttcgggaactga 5799597
Query: 2669 tctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagcca 2721
|| | | ||| |||||||||||||||| ||||| |||||||||| ||||||
Sbjct: 5799598 tccaatatccaggacaaagcaaaccaaatctcacatataacagataaaagcca 5799650
Score = 93.7 bits (47), Expect = 5e-016
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 802 tggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctc 861
||||||| ||||||||| || | |||| || |||||||||||||| || |||||||||
Sbjct: 12875851 tggaacaaagcaaagaggtgcgaagagacccctccaatgacccaaaattgttcatttctc 12875910
Query: 862 caccaatcctcaatgccaacaccactccatc 892
|||||||| ||||||||||||||||||||||
Sbjct: 12875911 caccaatcatcaatgccaacaccactccatc 12875941
Score = 93.7 bits (47), Expect = 5e-016
Identities = 128/155 (82%)
Strand = Plus / Plus
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||||||||| |||||||| ||||| || | ||||||||| |||||||| ||||||||
Sbjct: 5797327 agaatttcaacagaaccaagtgcccaccgaagcacttggttaagacgatctgaaagattg 5797386
Query: 1195 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaacct 1254
|| |||||||| |||||||| || || |||||||||||||| ||| |||| |||
Sbjct: 5797387 ataggagcagaccccttgaaagctgggcgcttgggcatgcagtagattgatctccagcct 5797446
Query: 1255 cttgcatgcatcttgaaaccagttaaaatatcttc 1289
| |||||||||||||| ||||| | |||||||||
Sbjct: 5797447 cgcgcatgcatcttgaatccagtgagaatatcttc 5797481
Score = 75.8 bits (38), Expect = 1e-010
Identities = 80/94 (85%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| ||||| |||||||||| ||| || |||||||||||||||||||||||
Sbjct: 8446974 ccttggaatacagcgaagagatgtgaagaaacacctccaatgacccaaaactgctcattc 8446915
Query: 859 ctccaccaatcctcaatgccaacaccactccatc 892
|||||||| || || ||| | |||||||||||||
Sbjct: 8446914 ctccaccagtcatcgatggccacaccactccatc 8446881
Score = 73.8 bits (37), Expect = 5e-010
Identities = 139/173 (80%)
Strand = Plus / Plus
Query: 2423 tcaaaagtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacaggg 2482
|||||||||| ||| || | ||| || ||||| ||||| || || || ||||| || |||
Sbjct: 5799261 tcaaaagtcagcattgcagcaccatcgtcagatacatagcaagagaccttgtccactggg 5799320
Query: 2483 taatccacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagt 2542
||||| ||||||||||||||||| || || ||| |||||| |||||||||||||| |
Sbjct: 5799321 taatcaacagcaagaatggacagcacggtattggcagtaacaagaggaggttccttcatg 5799380
Query: 2543 ggatccactgtactaacaaagacatcgattggagccaactgggatggctcacc 2595
|| || |||||||| ||||| | || | | ||||||||| |||||||||||
Sbjct: 5799381 gggtcgactgtactgacaaaaatgtcaacagcagccaactgagatggctcacc 5799433
Score = 69.9 bits (35), Expect = 7e-009
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactg 618
|||||||||| ||||||||| ||||||||||| || || |||||||||| || ||| ||
Sbjct: 8447211 atcacccagaatgcaaagaagagcttcccgaacagaggtccccatgattcatatccattg 8447152
Query: 619 ttgatagcatacgacactccagc 641
|||||||||| || ||||||||
Sbjct: 8447151 ttgatagcattagaaactccagc 8447129
Score = 69.9 bits (35), Expect = 7e-009
Identities = 92/111 (82%)
Strand = Plus / Plus
Query: 2002 agcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaac 2061
||||||||||||||||||||||||||||||||| || || || | ||| |||||||| ||
Sbjct: 5798644 agcattcatggcaccagccttcttgtggtgctgaaacccaggacgcttctcacgagatac 5798703
Query: 2062 ataaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtg 2112
|| || || || || | |||||| || || || ||||| |||||||||||
Sbjct: 5798704 gtagaccaggcggggaagctcattaccctcggtatcaaggccaccactgtg 5798754
Score = 67.9 bits (34), Expect = 3e-008
Identities = 154/194 (79%)
Strand = Plus / Minus
Query: 2384 acccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaa 2443
||||||||| ||||||| || | ||||| || || |||||||| || | ||| || | |
Sbjct: 8444754 acccatttctttgcaaattcagatgtttctgacagtgcttcaaatgtgagcattgcagca 8444695
Query: 2444 ccgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggac 2503
|| |||||||||||||| || || || || ||||| ||||||||||||| ||| |||||
Sbjct: 8444694 ccatcatcagaaacatagcaggaaaccttttcaactgggtaatccacagaaaggatggaa 8444635
Query: 2504 aggacagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaag 2563
||||| ||||| | || | || ||||||||||| |||||| |||||||| ||||||
Sbjct: 8444634 aggacggtgtttgctgtgactaagggaggttccttcgatggatcaactgtactgacaaag 8444575
Query: 2564 acatcgattggagc 2577
| |||| ||||||
Sbjct: 8444574 aagtcgactggagc 8444561
Score = 61.9 bits (31), Expect = 2e-006
Identities = 121/151 (80%)
Strand = Plus / Plus
Query: 1800 tgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaa 1859
|||||| ||| ||||||||||||| | || |||||||| || |||||||| |||||||
Sbjct: 5798350 tgttcctgttcgcatatcgatcattcctatcaataccatcgaacctttgtgggaactgaa 5798409
Query: 1860 catagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctctaagag 1919
|||| || |||||||||| ||||||||| | ||| |||||||| || | ||||
Sbjct: 5798410 cataacagacactccttcctaggtttggatccataaggaagcacatagcttcccgcagag 5798469
Query: 1920 ctttgctgctattgaagtagtgatcacaatc 1950
| |||||| | |||| |||||||||||||||
Sbjct: 5798470 ccttgctgttgttgatgtagtgatcacaatc 5798500
Score = 60.0 bits (30), Expect = 7e-006
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
||||| ||||| || |||| ||||||||| | ||||||||| ||||||||||| || ||
Sbjct: 12875590 aggaatgggtaaagatggacgatcacccaaaatgcaaagaagagcttcccgaagaggggt 12875649
Query: 598 ccccatgatt 607
||||||||||
Sbjct: 12875650 ccccatgatt 12875659
Score = 60.0 bits (30), Expect = 7e-006
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 1793 aagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtgga 1852
||||||| ||||||||| |||||||||||||| ||| ||||||||||| || || ||
Sbjct: 8445624 aagacaacgttccggttagcatatcgatcatgtcggtcaataccatcaaacctctgaggg 8445565
Query: 1853 aactgaacatagca 1866
||||| ||||||||
Sbjct: 8445564 aactgcacatagca 8445551
Score = 58.0 bits (29), Expect = 3e-005
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 1138 atttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaatt 1197
|||||||| || ||||||||||| || | ||||||| ||||||||||||||||| | |
Sbjct: 12876273 atttcaacagacccaagagcccaccgaagaacttggtgaagacgatcagaaagattgagt 12876332
Query: 1198 ggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 12876333 ggtgcagaacctttgaa 12876349
Score = 54.0 bits (27), Expect = 4e-004
Identities = 159/203 (78%)
Strand = Plus / Plus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||||||| ||||||| || | ||||| |||| |||||||| |||
Sbjct: 12878086 ttgcagaaaggaacccatttctttgcaaattcagatgtttcggataatgcttcaaatgtc 12878145
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | ||| |||||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 12878146 agcattgcagcaccatcatcagagacatagcatgaaaccttatcaactggataatctacc 12878205
Query: 2492 gcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatccact 2551
|| || || || || |||||||| | || | | |||||||||||| | ||||| ||
Sbjct: 12878206 gcgaggatagatagaacagtgtttgctgtgaccaaaggaggttccttcaagggatcaaca 12878265
Query: 2552 gtactaacaaagacatcgattgg 2574
||||| ||||||| |||||||||
Sbjct: 12878266 gtactgacaaagaaatcgattgg 12878288
Score = 54.0 bits (27), Expect = 4e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1736 gttcccacataaacaggtccttgaatgccatctagaccc 1774
|||||||||||||| |||||||| |||||||| ||||||
Sbjct: 5798125 gttcccacataaactggtccttggatgccatcaagaccc 5798163
Score = 48.1 bits (24), Expect = 0.027
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 1462 agactggccaaagcgtttctccaagctcttctgagacataagcagtga 1509
|||||||||||| | |||||||||||| | ||||||||||| |||||
Sbjct: 5797755 agactggccaaatctcttctccaagctcatttgagacataagaagtga 5797802
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2006 ttcatggcaccagccttcttgtg 2028
|||||||||||||||||||||||
Sbjct: 12877524 ttcatggcaccagccttcttgtg 12877546
Score = 44.1 bits (22), Expect = 0.42
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 1137 aatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaat 1196
||||||||| || ||||||||||| || | || |||| |||||||| ||||||||||
Sbjct: 8446555 aatttcaacagatccaagagcccaacgaaggacctggtgaagacgatccgaaagattaag 8446496
Query: 1197 tggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 8446495 aggtgcagaacctttgaa 8446478
Score = 44.1 bits (22), Expect = 0.42
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttc 2052
|||||||| |||||||||||||| || || | ||||||||||||||||
Sbjct: 8445315 gcattcatagcaccagccttcttatgatgattatagcctggcctcttttc 8445266
Score = 40.1 bits (20), Expect = 6.5
Identities = 44/52 (84%)
Strand = Plus / Plus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctcca 1081
||||| ||||| | |||||||| | ||||||||||||| || | ||||||||
Sbjct: 5797222 gggatcgatgtcaatggataaatagtggtgttgatgtaggcaaatctctcca 5797273
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 117 bits (59), Expect = 3e-023
Identities = 167/203 (82%)
Strand = Plus / Plus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||| |||||||||||||||| || ||||||||||| || ||||| ||||| | |||
Sbjct: 5885514 agaagcgttgtccacttgaacatgtagagctcagcaaagtcgccatcttcatcagaagcc 5885573
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
||||| ||||| ||||| || |||||||| || || ||||| || | |||||| |||||
Sbjct: 5885574 tttgaggtgacagtgaaattggtgtcgataccagcaagcaccttgaggagaccctggaag 5885633
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|| ||||| ||||| ||||| | || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 5885634 acggcaaaaagatgcgcagatatacctccaataacccagaactgttcattcctccaccac 5885693
Query: 868 tcctcaatgccaacaccactcca 890
|| || |||||||||||||||||
Sbjct: 5885694 tcatcgatgccaacaccactcca 5885716
Score = 103 bits (52), Expect = 5e-019
Identities = 145/176 (82%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || ||||| ||||||| | |||||||| |||||||||||
Sbjct: 5885274 acccacagcaatgagaagatcgaagccagaaggattgcccaaacaacaacgatggtcgga 5885333
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|||||||| ||| ||||| |||||||| ||||| ||||| | ||||| |||||||||
Sbjct: 5885334 gtgcggttttgccgacccataagacccttgaggaaggggtacaagtggacaatcacccag 5885393
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgat 623
| |||||||| ||||| || || || || ||||||||||||||||| ||||||||
Sbjct: 5885394 aaggcaaagaagagcttgccaaagagcggtccccatgattggtagccgctgttgat 5885449
Score = 97.6 bits (49), Expect = 3e-017
Identities = 97/113 (85%)
Strand = Plus / Plus
Query: 2609 ctcaatgcaagtctatcgaggtaagtttcacggttgataggataccactttgggaactga 2668
|||||||| || ||||| ||||| |||||||||||||| ||| ||||||| |||||||||
Sbjct: 5888254 ctcaatgccagcctatcaaggtaggtttcacggttgattggaaaccacttcgggaactga 5888313
Query: 2669 tctagaagccaagacaaagcaaaccaaacttcacaaataacagatacaagcca 2721
|| | | ||| |||||||||||||||| ||||| |||||||||| ||||||
Sbjct: 5888314 tccaatatccaggacaaagcaaaccaaatctcacatataacagataaaagcca 5888366
Score = 93.7 bits (47), Expect = 5e-016
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 802 tggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctc 861
||||||| ||||||||| || | |||| || |||||||||||||| || |||||||||
Sbjct: 13688983 tggaacaaagcaaagaggtgcgaagagacccctccaatgacccaaaattgttcatttctc 13689042
Query: 862 caccaatcctcaatgccaacaccactccatc 892
|||||||| ||||||||||||||||||||||
Sbjct: 13689043 caccaatcatcaatgccaacaccactccatc 13689073
Score = 93.7 bits (47), Expect = 5e-016
Identities = 128/155 (82%)
Strand = Plus / Plus
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||||||||| |||||||| ||||| || | ||||||||| |||||||| ||||||||
Sbjct: 5886043 agaatttcaacagaaccaagtgcccaccgaagcacttggttaagacgatctgaaagattg 5886102
Query: 1195 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaacct 1254
|| |||||||| |||||||| || || |||||||||||||| ||| |||| |||
Sbjct: 5886103 ataggagcagaccccttgaaagctgggcgcttgggcatgcagtagattgatctccagcct 5886162
Query: 1255 cttgcatgcatcttgaaaccagttaaaatatcttc 1289
| |||||||||||||| ||||| | |||||||||
Sbjct: 5886163 cgcgcatgcatcttgaatccagtgagaatatcttc 5886197
Score = 75.8 bits (38), Expect = 1e-010
Identities = 80/94 (85%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| ||||| |||||||||| ||| || |||||||||||||||||||||||
Sbjct: 8532977 ccttggaatacagcgaagagatgtgaagaaacacctccaatgacccaaaactgctcattc 8532918
Query: 859 ctccaccaatcctcaatgccaacaccactccatc 892
|||||||| || || ||| | |||||||||||||
Sbjct: 8532917 ctccaccagtcatcgatggccacaccactccatc 8532884
Score = 73.8 bits (37), Expect = 5e-010
Identities = 139/173 (80%)
Strand = Plus / Plus
Query: 2423 tcaaaagtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacaggg 2482
|||||||||| ||| || | ||| || ||||| ||||| || || || ||||| || |||
Sbjct: 5887977 tcaaaagtcagcattgcagcaccatcgtcagatacatagcaagagaccttgtccactggg 5888036
Query: 2483 taatccacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagt 2542
||||| ||||||||||||||||| || || ||| |||||| |||||||||||||| |
Sbjct: 5888037 taatcaacagcaagaatggacagcacggtattggcagtaacaagaggaggttccttcatg 5888096
Query: 2543 ggatccactgtactaacaaagacatcgattggagccaactgggatggctcacc 2595
|| || |||||||| ||||| | || | | ||||||||| |||||||||||
Sbjct: 5888097 gggtcgactgtactgacaaaaatgtcaacagcagccaactgagatggctcacc 5888149
Score = 69.9 bits (35), Expect = 7e-009
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactg 618
|||||||||| ||||||||| ||||||||||| || || |||||||||| || ||| ||
Sbjct: 8533214 atcacccagaatgcaaagaagagcttcccgaacagaggtccccatgattcatatccattg 8533155
Query: 619 ttgatagcatacgacactccagc 641
|||||||||| || ||||||||
Sbjct: 8533154 ttgatagcattagaaactccagc 8533132
Score = 69.9 bits (35), Expect = 7e-009
Identities = 92/111 (82%)
Strand = Plus / Plus
Query: 2002 agcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttcacgagaaac 2061
||||||||||||||||||||||||||||||||| || || || | ||| |||||||| ||
Sbjct: 5887360 agcattcatggcaccagccttcttgtggtgctgaaacccaggacgcttctcacgagatac 5887419
Query: 2062 ataaacaagccgtggcaactcattcccatccgtgtcaagcccaccactgtg 2112
|| || || || || | |||||| || || || ||||| |||||||||||
Sbjct: 5887420 gtagaccaggcggggaagctcattaccctcggtatcaaggccaccactgtg 5887470
Score = 67.9 bits (34), Expect = 3e-008
Identities = 154/194 (79%)
Strand = Plus / Minus
Query: 2384 acccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaa 2443
||||||||| ||||||| || | ||||| || || |||||||| || | ||| || | |
Sbjct: 8530757 acccatttctttgcaaattcagatgtttctgacagtgcttcaaatgtgagcattgcagca 8530698
Query: 2444 ccgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggac 2503
|| |||||||||||||| || || || || ||||| ||||||||||||| ||| |||||
Sbjct: 8530697 ccatcatcagaaacatagcaggaaaccttttcaactgggtaatccacagaaaggatggaa 8530638
Query: 2504 aggacagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaag 2563
||||| ||||| | || | || ||||||||||| |||||| |||||||| ||||||
Sbjct: 8530637 aggacggtgtttgctgtgactaagggaggttccttcgatggatcaactgtactgacaaag 8530578
Query: 2564 acatcgattggagc 2577
| |||| ||||||
Sbjct: 8530577 aagtcgactggagc 8530564
Score = 61.9 bits (31), Expect = 2e-006
Identities = 121/151 (80%)
Strand = Plus / Plus
Query: 1800 tgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaa 1859
|||||| ||| ||||||||||||| | || |||||||| || |||||||| |||||||
Sbjct: 5887066 tgttcctgttcgcatatcgatcattcctatcaataccatcgaacctttgtgggaactgaa 5887125
Query: 1860 catagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctctaagag 1919
|||| || |||||||||| ||||||||| | ||| |||||||| || | ||||
Sbjct: 5887126 cataacagacactccttcctaggtttggatccataaggaagcacatagcttcccgcagag 5887185
Query: 1920 ctttgctgctattgaagtagtgatcacaatc 1950
| |||||| | |||| |||||||||||||||
Sbjct: 5887186 ccttgctgttgttgatgtagtgatcacaatc 5887216
Score = 60.0 bits (30), Expect = 7e-006
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
||||| ||||| || |||| ||||||||| | ||||||||| ||||||||||| || ||
Sbjct: 13688722 aggaatgggtaaagatggacgatcacccaaaatgcaaagaagagcttcccgaagaggggt 13688781
Query: 598 ccccatgatt 607
||||||||||
Sbjct: 13688782 ccccatgatt 13688791
Score = 60.0 bits (30), Expect = 7e-006
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 1793 aagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtgga 1852
||||||| ||||||||| |||||||||||||| ||| ||||||||||| || || ||
Sbjct: 8531627 aagacaacgttccggttagcatatcgatcatgtcggtcaataccatcaaacctctgaggg 8531568
Query: 1853 aactgaacatagca 1866
||||| ||||||||
Sbjct: 8531567 aactgcacatagca 8531554
Score = 58.0 bits (29), Expect = 3e-005
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 1138 atttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaatt 1197
|||||||| || ||||||||||| || | ||||||| ||||||||||||||||| | |
Sbjct: 13689405 atttcaacagacccaagagcccaccgaagaacttggtgaagacgatcagaaagattgagt 13689464
Query: 1198 ggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 13689465 ggtgcagaacctttgaa 13689481
Score = 54.0 bits (27), Expect = 4e-004
Identities = 159/203 (78%)
Strand = Plus / Plus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||||||| ||||||| || | ||||| |||| |||||||| |||
Sbjct: 13691218 ttgcagaaaggaacccatttctttgcaaattcagatgtttcggataatgcttcaaatgtc 13691277
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | ||| |||||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 13691278 agcattgcagcaccatcatcagagacatagcatgaaaccttatcaactggataatctacc 13691337
Query: 2492 gcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatccact 2551
|| || || || || |||||||| | || | | |||||||||||| | ||||| ||
Sbjct: 13691338 gcgaggatagatagaacagtgtttgctgtgaccaaaggaggttccttcaagggatcaaca 13691397
Query: 2552 gtactaacaaagacatcgattgg 2574
||||| ||||||| |||||||||
Sbjct: 13691398 gtactgacaaagaaatcgattgg 13691420
Score = 54.0 bits (27), Expect = 4e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1736 gttcccacataaacaggtccttgaatgccatctagaccc 1774
|||||||||||||| |||||||| |||||||| ||||||
Sbjct: 5886841 gttcccacataaactggtccttggatgccatcaagaccc 5886879
Score = 48.1 bits (24), Expect = 0.027
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 1462 agactggccaaagcgtttctccaagctcttctgagacataagcagtga 1509
|||||||||||| | |||||||||||| | ||||||||||| |||||
Sbjct: 5886471 agactggccaaatctcttctccaagctcatttgagacataagaagtga 5886518
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2006 ttcatggcaccagccttcttgtg 2028
|||||||||||||||||||||||
Sbjct: 13690656 ttcatggcaccagccttcttgtg 13690678
Score = 44.1 bits (22), Expect = 0.42
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 1137 aatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaat 1196
||||||||| || ||||||||||| || | || |||| |||||||| ||||||||||
Sbjct: 8532558 aatttcaacagatccaagagcccaacgaaggacctggtgaagacgatccgaaagattaag 8532499
Query: 1197 tggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 8532498 aggtgcagaacctttgaa 8532481
Score = 44.1 bits (22), Expect = 0.42
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttc 2052
|||||||| |||||||||||||| || || | ||||||||||||||||
Sbjct: 8531318 gcattcatagcaccagccttcttatgatgattatagcctggcctcttttc 8531269
Score = 40.1 bits (20), Expect = 6.5
Identities = 44/52 (84%)
Strand = Plus / Plus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctcca 1081
||||| ||||| | |||||||| | ||||||||||||| || | ||||||||
Sbjct: 5885938 gggatcgatgtcaatggataaatagtggtgttgatgtaggcaaatctctcca 5885989
>gb|CB640128.1|CB640128 OSJNEa13G02.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa13G02 5', mRNA sequence
Length = 594
Score = 109 bits (55), Expect = 8e-021
Identities = 175/215 (81%)
Strand = Plus / Minus
Query: 1736 gttcccacataaacaggtccttgaatgccatctagacccttcatattaatatcaaagaag 1795
|||||||||||||| |||||||| |||||||| |||||| ||| |||||||| || ||
Sbjct: 223 gttcccacataaactggtccttggatgccatcaagacccctcaagttaatatcgaaaaac 164
Query: 1796 acaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaac 1855
||| |||||| ||| ||||||||||||| | || |||||||| || |||||||| |||
Sbjct: 163 acagtgttcctgttcgcatatcgatcattcctatcaataccatcgaacctttgtgggaac 104
Query: 1856 tgaacatagcaagttttccttcctagtgctggatccatcatgaaacacatagcctctcta 1915
|||||||| || |||||||||| ||||||||| | ||| |||||||| || |
Sbjct: 103 tgaacataacagacactccttcctaggtttggatccataaggaagcacatagcttcccgc 44
Query: 1916 agagctttgctgctattgaagtagtgatcacaatc 1950
||||| |||||| | |||| |||||||||||||||
Sbjct: 43 agagccttgctgttgttgatgtagtgatcacaatc 9
Score = 48.1 bits (24), Expect = 0.027
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 1462 agactggccaaagcgtttctccaagctcttctgagacataagcagtga 1509
|||||||||||| | |||||||||||| | ||||||||||| |||||
Sbjct: 503 agactggccaaatctcttctccaagctcatttgagacataagaagtga 456
>gb|CF277609.1|CF277609 14ETL--03-D13.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--03-D13, mRNA sequence
Length = 650
Score = 109 bits (55), Expect = 8e-021
Identities = 166/203 (81%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||| |||||||||||||||| || ||||||||||| || ||||| ||||| | |||
Sbjct: 254 agaagcgttgtccacttgaacatgtagagctcagcaaagtcgccatcttcatcagaagcc 195
Query: 748 tttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttggaac 807
||||| ||||| ||||| || |||||||| || || ||||| || | |||||| |||||
Sbjct: 194 tttgaggtgacagtgaaattggtgtcgataccagcaagcaccttgaggagaccctggaag 135
Query: 808 acagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccaccaa 867
|| ||||| || || ||||| | || ||||| ||||| ||||| ||||| ||||||||
Sbjct: 134 acggcaaaaaggtgcgcagatatacctccaataacccagaactgttcattcctccaccac 75
Query: 868 tcctcaatgccaacaccactcca 890
|| || |||||||||||||||||
Sbjct: 74 tcatcgatgccaacaccactcca 52
Score = 103 bits (52), Expect = 5e-019
Identities = 145/176 (82%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || ||||| ||||||| | |||||||| |||||||||||
Sbjct: 494 acccacagcaatgagaagatcgaagccagaaggattgcccaaacaacaacgatggtcgga 435
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|||||||| ||| ||||| |||||||| ||||| ||||| | ||||| |||||||||
Sbjct: 434 gtgcggttttgccgacccataagacccttgaggaaggggtacaagtggacaatcacccag 375
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgat 623
| |||||||| ||||| || || || || ||||||||||||||||| ||||||||
Sbjct: 374 aaggcaaagaagagcttgccaaagagcggtccccatgattggtagccgctgttgat 319
>dbj|AK060814.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-H07, full
insert sequence
Length = 1180
Score = 109 bits (55), Expect = 8e-021
Identities = 124/147 (84%)
Strand = Plus / Minus
Query: 746 cctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgga 805
|||||||||| || |||||| |||| ||||| || |||| || || | || |||||||
Sbjct: 232 cctttgatgtcacagtgaagcttgtatcgataccagctatgaccttgagaagtccttgga 173
Query: 806 acacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccacc 865
|||||||||||||||||| |||| || |||||||||||||||||||| || |||||||
Sbjct: 172 acacagcaaagagatgtgaagagacacctccaatgacccaaaactgctcgttcctccacc 113
Query: 866 aatcctcaatgccaacaccactccatc 892
|||| || ||||| |||||||||||||
Sbjct: 112 aatcatcgatgcctacaccactccatc 86
Score = 50.1 bits (25), Expect = 0.007
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgatt 607
|||||||| | |||||||||||||||||| || || || ||||||||||
Sbjct: 416 atcacccaaaatgcaaagaacagcttcccaaagagcggcccccatgatt 368
>dbj|AK100877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127C10, full
insert sequence
Length = 4029
Score = 109 bits (55), Expect = 8e-021
Identities = 124/147 (84%)
Strand = Plus / Minus
Query: 746 cctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgga 805
|||||||||| || |||||| |||| ||||| || |||| || || | || |||||||
Sbjct: 3084 cctttgatgtcacagtgaagcttgtatcgataccagctatgaccttgagaagtccttgga 3025
Query: 806 acacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccacc 865
|||||||||||||||||| |||| || |||||||||||||||||||| || |||||||
Sbjct: 3024 acacagcaaagagatgtgaagagacacctccaatgacccaaaactgctcgttcctccacc 2965
Query: 866 aatcctcaatgccaacaccactccatc 892
|||| || ||||| |||||||||||||
Sbjct: 2964 aatcatcgatgcctacaccactccatc 2938
Score = 61.9 bits (31), Expect = 2e-006
Identities = 157/199 (78%)
Strand = Plus / Minus
Query: 1754 ccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggtttgca 1813
|||||||| ||||| | ||| ||||| || ||||| || ||||| | |||| || |||
Sbjct: 2056 ccttgaataccatccaaacctttcatgttgatatcgaaaaagacgacattcctattagca 1997
Query: 1814 tatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagttttc 1873
||||||||||| ||| || ||||| ||||||||||| ||||| ||||| ||| ||||
Sbjct: 1996 tatcgatcatgacggtcaatgccatcgaatctttgtgggaactgcacataacaaactttc 1937
Query: 1874 cttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgctattg 1933
|||||| ||||||||||| |||||||| || || | | ||| |||||| | |||
Sbjct: 1936 tttcctaccaagggatccatcataaaacacattgcttcctttatagccttgctgttgttg 1877
Query: 1934 aagtagtgatcacaatcca 1952
| |||||||||||||||||
Sbjct: 1876 atgtagtgatcacaatcca 1858
Score = 56.0 bits (28), Expect = 1e-004
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 2645 ataggataccactttgggaactgatctagaagccaagaca 2684
|||||| ||||||||||||||||||| |||| ||||||||
Sbjct: 1165 ataggaaaccactttgggaactgatcaagaatccaagaca 1126
Score = 50.1 bits (25), Expect = 0.007
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgatt 607
|||||||| | |||||||||||||||||| || || || ||||||||||
Sbjct: 3268 atcacccaaaatgcaaagaacagcttcccaaagagcggcccccatgatt 3220
Score = 48.1 bits (24), Expect = 0.027
Identities = 111/140 (79%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||| ||| ||||||| || | |||||||| || |||||||| |||
Sbjct: 1438 ttgcagaaaggaacccacttctttgcaaattcagatgtttcagacagtgcttcaaatgtc 1379
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | || |||||||||||||| || || || ||||| || || ||||| ||
Sbjct: 1378 agcatggcagccccatcatcagaaacatagcaagagaccttgtcgaccggataatctacc 1319
Query: 2492 gcaagaatggacaggacagt 2511
||||| || ||||| |||||
Sbjct: 1318 gcaaggatagacagaacagt 1299
>dbj|AK101178.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029A22, full
insert sequence
Length = 2325
Score = 109 bits (55), Expect = 8e-021
Identities = 124/147 (84%)
Strand = Plus / Minus
Query: 746 cctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgga 805
|||||||||| || |||||| |||| ||||| || |||| || || | || |||||||
Sbjct: 1709 cctttgatgtcacagtgaagcttgtatcgataccagctatgaccttgagaagtccttgga 1650
Query: 806 acacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccacc 865
|||||||||||||||||| |||| || |||||||||||||||||||| || |||||||
Sbjct: 1649 acacagcaaagagatgtgaagagacacctccaatgacccaaaactgctcgttcctccacc 1590
Query: 866 aatcctcaatgccaacaccactccatc 892
|||| || ||||| |||||||||||||
Sbjct: 1589 aatcatcgatgcctacaccactccatc 1563
Score = 61.9 bits (31), Expect = 2e-006
Identities = 157/199 (78%)
Strand = Plus / Minus
Query: 1754 ccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggtttgca 1813
|||||||| ||||| | ||| ||||| || ||||| || ||||| | |||| || |||
Sbjct: 681 ccttgaataccatccaaacctttcatgttgatatcgaaaaagacgacattcctattagca 622
Query: 1814 tatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagttttc 1873
||||||||||| ||| || ||||| ||||||||||| ||||| ||||| ||| ||||
Sbjct: 621 tatcgatcatgacggtcaatgccatcgaatctttgtgggaactgcacataacaaactttc 562
Query: 1874 cttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgctattg 1933
|||||| ||||||||||| |||||||| || || | | ||| |||||| | |||
Sbjct: 561 tttcctaccaagggatccatcataaaacacattgcttcctttatagccttgctgttgttg 502
Query: 1934 aagtagtgatcacaatcca 1952
| |||||||||||||||||
Sbjct: 501 atgtagtgatcacaatcca 483
Score = 50.1 bits (25), Expect = 0.007
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgatt 607
|||||||| | |||||||||||||||||| || || || ||||||||||
Sbjct: 1893 atcacccaaaatgcaaagaacagcttcccaaagagcggcccccatgatt 1845
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete
sequence
Length = 171376
Score = 109 bits (55), Expect = 8e-021
Identities = 124/147 (84%)
Strand = Plus / Plus
Query: 746 cctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgga 805
|||||||||| || |||||| |||| ||||| || |||| || || | || |||||||
Sbjct: 137043 cctttgatgtcacagtgaagcttgtatcgataccagctatgaccttgagaagtccttgga 137102
Query: 806 acacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccacc 865
|||||||||||||||||| |||| || |||||||||||||||||||| || |||||||
Sbjct: 137103 acacagcaaagagatgtgaagagacacctccaatgacccaaaactgctcgttcctccacc 137162
Query: 866 aatcctcaatgccaacaccactccatc 892
|||| || ||||| |||||||||||||
Sbjct: 137163 aatcatcgatgcctacaccactccatc 137189
Score = 60.0 bits (30), Expect = 7e-006
Identities = 114/142 (80%)
Strand = Plus / Plus
Query: 1811 gcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagtt 1870
|||||||||||||| ||| || ||||| ||||||||||| ||||| ||||| ||| |
Sbjct: 138499 gcatatcgatcatgacggtcaatgccatcgaatctttgtgggaactgcacataacaaact 138558
Query: 1871 ttccttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgcta 1930
||| |||||| ||||||||||| |||||||| || || | | ||| |||||| |
Sbjct: 138559 ttctttcctaccaagggatccatcataaaacacattgcttcctttatagccttgctgttg 138618
Query: 1931 ttgaagtagtgatcacaatcca 1952
|||| |||||||||||||||||
Sbjct: 138619 ttgatgtagtgatcacaatcca 138640
Score = 56.0 bits (28), Expect = 1e-004
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 2645 ataggataccactttgggaactgatctagaagccaagaca 2684
|||||| ||||||||||||||||||| |||| ||||||||
Sbjct: 139705 ataggaaaccactttgggaactgatcaagaatccaagaca 139744
Score = 50.1 bits (25), Expect = 0.007
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgatt 607
|||||||| | |||||||||||||||||| || || || ||||||||||
Sbjct: 136859 atcacccaaaatgcaaagaacagcttcccaaagagcggcccccatgatt 136907
Score = 48.1 bits (24), Expect = 0.027
Identities = 111/140 (79%)
Strand = Plus / Plus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||| ||| ||||||| || | |||||||| || |||||||| |||
Sbjct: 139350 ttgcagaaaggaacccacttctttgcaaattcagatgtttcagacagtgcttcaaatgtc 139409
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | || |||||||||||||| || || || ||||| || || ||||| ||
Sbjct: 139410 agcatggcagccccatcatcagaaacatagcaagagaccttgtcgaccggataatctacc 139469
Query: 2492 gcaagaatggacaggacagt 2511
||||| || ||||| |||||
Sbjct: 139470 gcaaggatagacagaacagt 139489
>gb|AACV01008229.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg008229, whole
genome shotgun sequence
Length = 36790
Score = 109 bits (55), Expect = 8e-021
Identities = 124/147 (84%)
Strand = Plus / Minus
Query: 746 cctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgga 805
|||||||||| || |||||| |||| ||||| || |||| || || | || |||||||
Sbjct: 7933 cctttgatgtcacagtgaagcttgtatcgataccagctatgaccttgagaagtccttgga 7874
Query: 806 acacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccacc 865
|||||||||||||||||| |||| || |||||||||||||||||||| || |||||||
Sbjct: 7873 acacagcaaagagatgtgaagagacacctccaatgacccaaaactgctcgttcctccacc 7814
Query: 866 aatcctcaatgccaacaccactccatc 892
|||| || ||||| |||||||||||||
Sbjct: 7813 aatcatcgatgcctacaccactccatc 7787
Score = 60.0 bits (30), Expect = 7e-006
Identities = 114/142 (80%)
Strand = Plus / Minus
Query: 1811 gcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagtt 1870
|||||||||||||| ||| || ||||| ||||||||||| ||||| ||||| ||| |
Sbjct: 6477 gcatatcgatcatgacggtcaatgccatcgaatctttgtgggaactgcacataacaaact 6418
Query: 1871 ttccttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgcta 1930
||| |||||| ||||||||||| |||||||| || || | | ||| |||||| |
Sbjct: 6417 ttctttcctaccaagggatccatcataaaacacattgcttcctttatagccttgctgttg 6358
Query: 1931 ttgaagtagtgatcacaatcca 1952
|||| |||||||||||||||||
Sbjct: 6357 ttgatgtagtgatcacaatcca 6336
Score = 56.0 bits (28), Expect = 1e-004
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 2645 ataggataccactttgggaactgatctagaagccaagaca 2684
|||||| ||||||||||||||||||| |||| ||||||||
Sbjct: 5271 ataggaaaccactttgggaactgatcaagaatccaagaca 5232
Score = 50.1 bits (25), Expect = 0.007
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgatt 607
|||||||| | |||||||||||||||||| || || || ||||||||||
Sbjct: 8117 atcacccaaaatgcaaagaacagcttcccaaagagcggcccccatgatt 8069
Score = 48.1 bits (24), Expect = 0.027
Identities = 111/140 (79%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||| ||| ||||||| || | |||||||| || |||||||| |||
Sbjct: 5626 ttgcagaaaggaacccacttctttgcaaattcagatgtttcagacagtgcttcaaatgtc 5567
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | || |||||||||||||| || || || ||||| || || ||||| ||
Sbjct: 5566 agcatggcagccccatcatcagaaacatagcaagagaccttgtcgaccggataatctacc 5507
Query: 2492 gcaagaatggacaggacagt 2511
||||| || ||||| |||||
Sbjct: 5506 gcaaggatagacagaacagt 5487
>ref|XM_470347.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3905
Score = 109 bits (55), Expect = 8e-021
Identities = 124/147 (84%)
Strand = Plus / Minus
Query: 746 cctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgga 805
|||||||||| || |||||| |||| ||||| || |||| || || | || |||||||
Sbjct: 2914 cctttgatgtcacagtgaagcttgtatcgataccagctatgaccttgagaagtccttgga 2855
Query: 806 acacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccacc 865
|||||||||||||||||| |||| || |||||||||||||||||||| || |||||||
Sbjct: 2854 acacagcaaagagatgtgaagagacacctccaatgacccaaaactgctcgttcctccacc 2795
Query: 866 aatcctcaatgccaacaccactccatc 892
|||| || ||||| |||||||||||||
Sbjct: 2794 aatcatcgatgcctacaccactccatc 2768
Score = 61.9 bits (31), Expect = 2e-006
Identities = 157/199 (78%)
Strand = Plus / Minus
Query: 1754 ccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggtttgca 1813
|||||||| ||||| | ||| ||||| || ||||| || ||||| | |||| || |||
Sbjct: 1886 ccttgaataccatccaaacctttcatgttgatatcgaaaaagacgacattcctattagca 1827
Query: 1814 tatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagttttc 1873
||||||||||| ||| || ||||| ||||||||||| ||||| ||||| ||| ||||
Sbjct: 1826 tatcgatcatgacggtcaatgccatcgaatctttgtgggaactgcacataacaaactttc 1767
Query: 1874 cttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgctattg 1933
|||||| ||||||||||| |||||||| || || | | ||| |||||| | |||
Sbjct: 1766 tttcctaccaagggatccatcataaaacacattgcttcctttatagccttgctgttgttg 1707
Query: 1934 aagtagtgatcacaatcca 1952
| |||||||||||||||||
Sbjct: 1706 atgtagtgatcacaatcca 1688
Score = 56.0 bits (28), Expect = 1e-004
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 2645 ataggataccactttgggaactgatctagaagccaagaca 2684
|||||| ||||||||||||||||||| |||| ||||||||
Sbjct: 995 ataggaaaccactttgggaactgatcaagaatccaagaca 956
Score = 50.1 bits (25), Expect = 0.007
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgatt 607
|||||||| | |||||||||||||||||| || || || ||||||||||
Sbjct: 3098 atcacccaaaatgcaaagaacagcttcccaaagagcggcccccatgatt 3050
Score = 48.1 bits (24), Expect = 0.027
Identities = 111/140 (79%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||| ||| ||||||| || | |||||||| || |||||||| |||
Sbjct: 1268 ttgcagaaaggaacccacttctttgcaaattcagatgtttcagacagtgcttcaaatgtc 1209
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | || |||||||||||||| || || || ||||| || || ||||| ||
Sbjct: 1208 agcatggcagccccatcatcagaaacatagcaagagaccttgtcgaccggataatctacc 1149
Query: 2492 gcaagaatggacaggacagt 2511
||||| || ||||| |||||
Sbjct: 1148 gcaaggatagacagaacagt 1129
>ref|NT_079914.2| Oryza sativa (japonica cultivar-group)
Length = 1404373
Score = 109 bits (55), Expect = 8e-021
Identities = 124/147 (84%)
Strand = Plus / Minus
Query: 746 cctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgga 805
|||||||||| || |||||| |||| ||||| || |||| || || | || |||||||
Sbjct: 180140 cctttgatgtcacagtgaagcttgtatcgataccagctatgaccttgagaagtccttgga 180081
Query: 806 acacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctccacc 865
|||||||||||||||||| |||| || |||||||||||||||||||| || |||||||
Sbjct: 180080 acacagcaaagagatgtgaagagacacctccaatgacccaaaactgctcgttcctccacc 180021
Query: 866 aatcctcaatgccaacaccactccatc 892
|||| || ||||| |||||||||||||
Sbjct: 180020 aatcatcgatgcctacaccactccatc 179994
Score = 60.0 bits (30), Expect = 7e-006
Identities = 114/142 (80%)
Strand = Plus / Minus
Query: 1811 gcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagtt 1870
|||||||||||||| ||| || ||||| ||||||||||| ||||| ||||| ||| |
Sbjct: 178684 gcatatcgatcatgacggtcaatgccatcgaatctttgtgggaactgcacataacaaact 178625
Query: 1871 ttccttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgcta 1930
||| |||||| ||||||||||| |||||||| || || | | ||| |||||| |
Sbjct: 178624 ttctttcctaccaagggatccatcataaaacacattgcttcctttatagccttgctgttg 178565
Query: 1931 ttgaagtagtgatcacaatcca 1952
|||| |||||||||||||||||
Sbjct: 178564 ttgatgtagtgatcacaatcca 178543
Score = 56.0 bits (28), Expect = 1e-004
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 2645 ataggataccactttgggaactgatctagaagccaagaca 2684
|||||| ||||||||||||||||||| |||| ||||||||
Sbjct: 177478 ataggaaaccactttgggaactgatcaagaatccaagaca 177439
Score = 50.1 bits (25), Expect = 0.007
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgatt 607
|||||||| | |||||||||||||||||| || || || ||||||||||
Sbjct: 180324 atcacccaaaatgcaaagaacagcttcccaaagagcggcccccatgatt 180276
Score = 48.1 bits (24), Expect = 0.027
Identities = 111/140 (79%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||| ||| ||||||| || | |||||||| || |||||||| |||
Sbjct: 177833 ttgcagaaaggaacccacttctttgcaaattcagatgtttcagacagtgcttcaaatgtc 177774
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | || |||||||||||||| || || || ||||| || || ||||| ||
Sbjct: 177773 agcatggcagccccatcatcagaaacatagcaagagaccttgtcgaccggataatctacc 177714
Query: 2492 gcaagaatggacaggacagt 2511
||||| || ||||| |||||
Sbjct: 177713 gcaaggatagacagaacagt 177694
>gb|AU082170.1|AU082170 AU082170 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11739, mRNA sequence
Length = 715
Score = 103 bits (52), Expect = 5e-019
Identities = 145/176 (82%)
Strand = Plus / Minus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || ||||| ||||||| | |||||||| |||||||||||
Sbjct: 358 acccacagcaatgagaagatcgaagccagaaggattgcccaaacaacaacgatggtcgga 299
Query: 508 gtgcggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccag 567
|||||||| ||| ||||| |||||||| ||||| ||||| | ||||| |||||||||
Sbjct: 298 gtgcggttttgccgacccataagacccttgaggaaggggtacaagtggacaatcacccag 239
Query: 568 attgcaaagaacagcttcccgaatagtggaccccatgattggtagccactgttgat 623
| |||||||| ||||| || || || || ||||||||||||||||| ||||||||
Sbjct: 238 aaggcaaagaagagcttgccaaagagcggtccccatgattggtagccgctgttgat 183
Score = 58.0 bits (29), Expect = 3e-005
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 688 agaagagttgtccacttgaacacatacagctcagcaaaatcaccatcatcatcggttgcc 747
||||| |||||||||||||||| || ||||||||||| || ||||| ||||| | |||
Sbjct: 118 agaagcgttgtccacttgaacatgtagagctcagcaaagtcgccatcttcatcagaagcc 59
Query: 748 tttgatgtgaccgtgaagtttgtgtcgat 776
||||| | ||| ||||| || ||||||||
Sbjct: 58 tttgaggggacagtgaaattggtgtcgat 30
>gb|CB675258.1|CB675258 OSJNEe10O07.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe10O07 3', mRNA sequence
Length = 786
Score = 97.6 bits (49), Expect = 3e-017
Identities = 133/161 (82%)
Strand = Plus / Plus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| | || ||||| ||||| || || |||| |||||||
Sbjct: 247 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccaa 306
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||| ||||| || || ||||||||| |||||||||| ||||| ||||| ||||||
Sbjct: 307 agcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtag 366
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaa 590
||||||||||| ||||||| | ||||| |||||||||||
Sbjct: 367 aggtggaggatgacccagaaggagaagaagagcttcccgaa 407
>gb|C72423.1|C72423 C72423 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1590_1A, mRNA sequence
Length = 440
Score = 93.7 bits (47), Expect = 5e-016
Identities = 80/91 (87%)
Strand = Plus / Minus
Query: 802 tggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctc 861
||||||| ||||||||| || | |||| || |||||||||||||| || |||||||||
Sbjct: 283 tggaacaaagcaaagaggtgcgaagagacccctccaatgacccaaaattgttcatttctc 224
Query: 862 caccaatcctcaatgccaacaccactccatc 892
|||||||| ||||||||||||||||||||||
Sbjct: 223 caccaatcatcaatgccaacaccactccatc 193
>gb|CB671503.1|CB671503 OSJNEe05B24.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05B24 5', mRNA sequence
Length = 783
Score = 93.7 bits (47), Expect = 5e-016
Identities = 80/91 (87%)
Strand = Plus / Minus
Query: 802 tggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctc 861
||||||| ||||||||| || | |||| || |||||||||||||| || |||||||||
Sbjct: 669 tggaacaaagcaaagaggtgcgaagagacccctccaatgacccaaaattgttcatttctc 610
Query: 862 caccaatcctcaatgccaacaccactccatc 892
|||||||| ||||||||||||||||||||||
Sbjct: 609 caccaatcatcaatgccaacaccactccatc 579
Score = 71.9 bits (36), Expect = 2e-009
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
|||||||| |||||||||| ||||||||| ||||| || || || ||||| || ||||||
Sbjct: 210 tgcatcttaaaaccagttagaatatcttctgtaactgatccgtagatccagccaatctct 151
Query: 1321 ttcccccattctgttttatc 1340
|||||||| ||||| |||||
Sbjct: 150 ttcccccagtctgtcttatc 131
Score = 58.0 bits (29), Expect = 3e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1138 atttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaatt 1197
|||||||| || ||||||||||| || | ||||||| ||||||||||||||||| | |
Sbjct: 333 atttcaacagacccaagagcccaccggagaacttggtgaagacgatcagaaagattgagt 274
Query: 1198 ggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 273 ggtgcagaacctttgaa 257
>dbj|AK062154.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-H11, full
insert sequence
Length = 1827
Score = 93.7 bits (47), Expect = 5e-016
Identities = 80/91 (87%)
Strand = Plus / Minus
Query: 802 tggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctc 861
||||||| ||||||||| || | |||| || |||||||||||||| || |||||||||
Sbjct: 816 tggaacaaagcaaagaggtgcgaagagacccctccaatgacccaaaattgttcatttctc 757
Query: 862 caccaatcctcaatgccaacaccactccatc 892
|||||||| ||||||||||||||||||||||
Sbjct: 756 caccaatcatcaatgccaacaccactccatc 726
Score = 71.9 bits (36), Expect = 2e-009
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
|||||||| |||||||||| ||||||||| ||||| || || || ||||| || ||||||
Sbjct: 358 tgcatcttaaaaccagttagaatatcttctgtaactgatccgtagatccagccaatctct 299
Query: 1321 ttcccccattctgttttatc 1340
|||||||| ||||| |||||
Sbjct: 298 ttcccccagtctgtcttatc 279
Score = 60.0 bits (30), Expect = 7e-006
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
||||| ||||| || |||| ||||||||| | ||||||||| ||||||||||| || ||
Sbjct: 1077 aggaatgggtaaagatggacgatcacccaaaatgcaaagaagagcttcccgaagaggggt 1018
Query: 598 ccccatgatt 607
||||||||||
Sbjct: 1017 ccccatgatt 1008
Score = 58.0 bits (29), Expect = 3e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1138 atttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaatt 1197
|||||||| || ||||||||||| || | ||||||| ||||||||||||||||| | |
Sbjct: 481 atttcaacagacccaagagcccaccgaagaacttggtgaagacgatcagaaagattgagt 422
Query: 1198 ggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 421 ggtgcagaacctttgaa 405
>dbj|AK067386.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099F14, full
insert sequence
Length = 3221
Score = 93.7 bits (47), Expect = 5e-016
Identities = 80/91 (87%)
Strand = Plus / Minus
Query: 802 tggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctc 861
||||||| ||||||||| || | |||| || |||||||||||||| || |||||||||
Sbjct: 2210 tggaacaaagcaaagaggtgcgaagagacccctccaatgacccaaaattgttcatttctc 2151
Query: 862 caccaatcctcaatgccaacaccactccatc 892
|||||||| ||||||||||||||||||||||
Sbjct: 2150 caccaatcatcaatgccaacaccactccatc 2120
Score = 71.9 bits (36), Expect = 2e-009
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
|||||||| |||||||||| ||||||||| ||||| || || || ||||| || ||||||
Sbjct: 1751 tgcatcttaaaaccagttagaatatcttctgtaactgatccgtagatccagccaatctct 1692
Query: 1321 ttcccccattctgttttatc 1340
|||||||| ||||| |||||
Sbjct: 1691 ttcccccagtctgtcttatc 1672
Score = 60.0 bits (30), Expect = 7e-006
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
||||| ||||| || |||| ||||||||| | ||||||||| ||||||||||| || ||
Sbjct: 2471 aggaatgggtaaagatggacgatcacccaaaatgcaaagaagagcttcccgaagaggggt 2412
Query: 598 ccccatgatt 607
||||||||||
Sbjct: 2411 ccccatgatt 2402
Score = 58.0 bits (29), Expect = 3e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1138 atttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaatt 1197
|||||||| || ||||||||||| || | ||||||| ||||||||||||||||| | |
Sbjct: 1874 atttcaacagacccaagagcccaccgaagaacttggtgaagacgatcagaaagattgagt 1815
Query: 1198 ggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 1814 ggtgcagaacctttgaa 1798
Score = 54.0 bits (27), Expect = 4e-004
Identities = 159/203 (78%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||||||| ||||||| || | ||||| |||| |||||||| |||
Sbjct: 620 ttgcagaaaggaacccatttctttgcaaattcagatgtttcggataatgcttcaaatgtc 561
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | ||| |||||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 560 agcattgcagcaccatcatcagagacatagcatgaaaccttatcaactggataatctacc 501
Query: 2492 gcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatccact 2551
|| || || || || |||||||| | || | | |||||||||||| | ||||| ||
Sbjct: 500 gcgaggatagatagaacagtgtttgctgtgaccaaaggaggttccttcaagggatcaaca 441
Query: 2552 gtactaacaaagacatcgattgg 2574
||||| ||||||| |||||||||
Sbjct: 440 gtactgacaaagaaatcgattgg 418
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtg 2028
|||||||||||||||||||||||
Sbjct: 986 ttcatggcaccagccttcttgtg 964
>dbj|AK071976.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013085H01, full
insert sequence
Length = 1867
Score = 93.7 bits (47), Expect = 5e-016
Identities = 80/91 (87%)
Strand = Plus / Minus
Query: 802 tggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctc 861
||||||| ||||||||| || | |||| || |||||||||||||| || |||||||||
Sbjct: 921 tggaacaaagcaaagaggtgcgaagagacccctccaatgacccaaaattgttcatttctc 862
Query: 862 caccaatcctcaatgccaacaccactccatc 892
|||||||| ||||||||||||||||||||||
Sbjct: 861 caccaatcatcaatgccaacaccactccatc 831
Score = 63.9 bits (32), Expect = 5e-007
Identities = 68/80 (85%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
|||||| | |||||||||| ||||||||| ||||| || || || ||||| || ||||||
Sbjct: 462 tgcatcctaaaaccagttagaatatcttctgtaactgatccgtagatccagccaatctct 403
Query: 1321 ttcccccattctgttttatc 1340
|||||||| ||||| |||||
Sbjct: 402 ttcccccagtctgtcttatc 383
Score = 60.0 bits (30), Expect = 7e-006
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
||||| ||||| || |||| ||||||||| | ||||||||| ||||||||||| || ||
Sbjct: 1182 aggaatgggtaaagatggacgatcacccaaaatgcaaagaagagcttcccgaagaggggt 1123
Query: 598 ccccatgatt 607
||||||||||
Sbjct: 1122 ccccatgatt 1113
Score = 58.0 bits (29), Expect = 3e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1138 atttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaatt 1197
|||||||| || ||||||||||| || | ||||||| ||||||||||||||||| | |
Sbjct: 585 atttcaacagacccaagagcccaccgaagaacttggtgaagacgatcagaaagattgagt 526
Query: 1198 ggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 525 ggtgcagaacctttgaa 509
>dbj|AK073561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042D15, full
insert sequence
Length = 4208
Score = 93.7 bits (47), Expect = 5e-016
Identities = 80/91 (87%)
Strand = Plus / Minus
Query: 802 tggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctc 861
||||||| ||||||||| || | |||| || |||||||||||||| || |||||||||
Sbjct: 3198 tggaacaaagcaaagaggtgcgaagagacccctccaatgacccaaaattgttcatttctc 3139
Query: 862 caccaatcctcaatgccaacaccactccatc 892
|||||||| ||||||||||||||||||||||
Sbjct: 3138 caccaatcatcaatgccaacaccactccatc 3108
Score = 71.9 bits (36), Expect = 2e-009
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
|||||||| |||||||||| ||||||||| ||||| || || || ||||| || ||||||
Sbjct: 2739 tgcatcttaaaaccagttagaatatcttctgtaactgatccgtagatccagccaatctct 2680
Query: 1321 ttcccccattctgttttatc 1340
|||||||| ||||| |||||
Sbjct: 2679 ttcccccagtctgtcttatc 2660
Score = 58.0 bits (29), Expect = 3e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1138 atttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaatt 1197
|||||||| || ||||||||||| || | ||||||| ||||||||||||||||| | |
Sbjct: 2862 atttcaacagacccaagagcccaccgaagaacttggtgaagacgatcagaaagattgagt 2803
Query: 1198 ggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 2802 ggtgcagaacctttgaa 2786
Score = 54.0 bits (27), Expect = 4e-004
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 553 tggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgatt 607
|||| ||||||||| | ||||||||| ||||||||||| || || ||||||||||
Sbjct: 3444 tggacgatcacccaaaatgcaaagaagagcttcccgaagaggggtccccatgatt 3390
Score = 54.0 bits (27), Expect = 4e-004
Identities = 159/203 (78%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||||||| ||||||| || | ||||| |||| |||||||| |||
Sbjct: 1607 ttgcagaaaggaacccatttctttgcaaattcagatgtttcggataatgcttcaaatgtc 1548
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | ||| |||||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 1547 agcattgcagcaccatcatcagagacatagcatgaaaccttatcaactggataatctacc 1488
Query: 2492 gcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatccact 2551
|| || || || || |||||||| | || | | |||||||||||| | ||||| ||
Sbjct: 1487 gcgaggatagatagaacagtgtttgctgtgaccaaaggaggttccttcaagggatcaaca 1428
Query: 2552 gtactaacaaagacatcgattgg 2574
||||| ||||||| |||||||||
Sbjct: 1427 gtactgacaaagaaatcgattgg 1405
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtg 2028
|||||||||||||||||||||||
Sbjct: 1974 ttcatggcaccagccttcttgtg 1952
>dbj|AK121193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086F23, full
insert sequence
Length = 4127
Score = 93.7 bits (47), Expect = 5e-016
Identities = 80/91 (87%)
Strand = Plus / Minus
Query: 802 tggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctc 861
||||||| ||||||||| || | |||| || |||||||||||||| || |||||||||
Sbjct: 3116 tggaacaaagcaaagaggtgcgaagagacccctccaatgacccaaaattgttcatttctc 3057
Query: 862 caccaatcctcaatgccaacaccactccatc 892
|||||||| ||||||||||||||||||||||
Sbjct: 3056 caccaatcatcaatgccaacaccactccatc 3026
Score = 71.9 bits (36), Expect = 2e-009
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
|||||||| |||||||||| ||||||||| ||||| || || || ||||| || ||||||
Sbjct: 2657 tgcatcttaaaaccagttagaatatcttctgtaactgatccgtagatccagccaatctct 2598
Query: 1321 ttcccccattctgttttatc 1340
|||||||| ||||| |||||
Sbjct: 2597 ttcccccagtctgtcttatc 2578
Score = 60.0 bits (30), Expect = 7e-006
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
||||| ||||| || |||| ||||||||| | ||||||||| ||||||||||| || ||
Sbjct: 3377 aggaatgggtaaagatggacgatcacccaaaatgcaaagaagagcttcccgaagaggggt 3318
Query: 598 ccccatgatt 607
||||||||||
Sbjct: 3317 ccccatgatt 3308
Score = 58.0 bits (29), Expect = 3e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1138 atttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaatt 1197
|||||||| || ||||||||||| || | ||||||| ||||||||||||||||| | |
Sbjct: 2780 atttcaacagacccaagagcccaccgaagaacttggtgaagacgatcagaaagattgagt 2721
Query: 1198 ggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 2720 ggtgcagaacctttgaa 2704
Score = 54.0 bits (27), Expect = 4e-004
Identities = 159/203 (78%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||||||| ||||||| || | ||||| |||| |||||||| |||
Sbjct: 1526 ttgcagaaaggaacccatttctttgcaaattcagatgtttcggataatgcttcaaatgtc 1467
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | ||| |||||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 1466 agcattgcagcaccatcatcagagacatagcatgaaaccttatcaactggataatctacc 1407
Query: 2492 gcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatccact 2551
|| || || || || |||||||| | || | | |||||||||||| | ||||| ||
Sbjct: 1406 gcgaggatagatagaacagtgtttgctgtgaccaaaggaggttccttcaagggatcaaca 1347
Query: 2552 gtactaacaaagacatcgattgg 2574
||||| ||||||| |||||||||
Sbjct: 1346 gtactgacaaagaaatcgattgg 1324
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtg 2028
|||||||||||||||||||||||
Sbjct: 1892 ttcatggcaccagccttcttgtg 1870
>dbj|AP004298.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0409D09
Length = 150485
Score = 93.7 bits (47), Expect = 5e-016
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 802 tggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctc 861
||||||| ||||||||| || | |||| || |||||||||||||| || |||||||||
Sbjct: 39975 tggaacaaagcaaagaggtgcgaagagacccctccaatgacccaaaattgttcatttctc 40034
Query: 862 caccaatcctcaatgccaacaccactccatc 892
|||||||| ||||||||||||||||||||||
Sbjct: 40035 caccaatcatcaatgccaacaccactccatc 40065
Score = 60.0 bits (30), Expect = 7e-006
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
||||| ||||| || |||| ||||||||| | ||||||||| ||||||||||| || ||
Sbjct: 39714 aggaatgggtaaagatggacgatcacccaaaatgcaaagaagagcttcccgaagaggggt 39773
Query: 598 ccccatgatt 607
||||||||||
Sbjct: 39774 ccccatgatt 39783
Score = 58.0 bits (29), Expect = 3e-005
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 1138 atttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaatt 1197
|||||||| || ||||||||||| || | ||||||| ||||||||||||||||| | |
Sbjct: 40397 atttcaacagacccaagagcccaccgaagaacttggtgaagacgatcagaaagattgagt 40456
Query: 1198 ggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 40457 ggtgcagaacctttgaa 40473
Score = 54.0 bits (27), Expect = 4e-004
Identities = 159/203 (78%)
Strand = Plus / Plus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||||||| ||||||| || | ||||| |||| |||||||| |||
Sbjct: 42210 ttgcagaaaggaacccatttctttgcaaattcagatgtttcggataatgcttcaaatgtc 42269
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | ||| |||||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 42270 agcattgcagcaccatcatcagagacatagcatgaaaccttatcaactggataatctacc 42329
Query: 2492 gcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatccact 2551
|| || || || || |||||||| | || | | |||||||||||| | ||||| ||
Sbjct: 42330 gcgaggatagatagaacagtgtttgctgtgaccaaaggaggttccttcaagggatcaaca 42389
Query: 2552 gtactaacaaagacatcgattgg 2574
||||| ||||||| |||||||||
Sbjct: 42390 gtactgacaaagaaatcgattgg 42412
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2006 ttcatggcaccagccttcttgtg 2028
|||||||||||||||||||||||
Sbjct: 41648 ttcatggcaccagccttcttgtg 41670
>dbj|AP005248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OSJNBa0084P08
Length = 158656
Score = 93.7 bits (47), Expect = 5e-016
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 802 tggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctc 861
||||||| ||||||||| || | |||| || |||||||||||||| || |||||||||
Sbjct: 156602 tggaacaaagcaaagaggtgcgaagagacccctccaatgacccaaaattgttcatttctc 156661
Query: 862 caccaatcctcaatgccaacaccactccatc 892
|||||||| ||||||||||||||||||||||
Sbjct: 156662 caccaatcatcaatgccaacaccactccatc 156692
Score = 60.0 bits (30), Expect = 7e-006
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
||||| ||||| || |||| ||||||||| | ||||||||| ||||||||||| || ||
Sbjct: 156341 aggaatgggtaaagatggacgatcacccaaaatgcaaagaagagcttcccgaagaggggt 156400
Query: 598 ccccatgatt 607
||||||||||
Sbjct: 156401 ccccatgatt 156410
Score = 58.0 bits (29), Expect = 3e-005
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 1138 atttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaatt 1197
|||||||| || ||||||||||| || | ||||||| ||||||||||||||||| | |
Sbjct: 157024 atttcaacagacccaagagcccaccgaagaacttggtgaagacgatcagaaagattgagt 157083
Query: 1198 ggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 157084 ggtgcagaacctttgaa 157100
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2006 ttcatggcaccagccttcttgtg 2028
|||||||||||||||||||||||
Sbjct: 158275 ttcatggcaccagccttcttgtg 158297
>gb|AACV01015914.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015914, whole
genome shotgun sequence
Length = 29977
Score = 93.7 bits (47), Expect = 5e-016
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 802 tggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctc 861
||||||| ||||||||| || | |||| || |||||||||||||| || |||||||||
Sbjct: 12555 tggaacaaagcaaagaggtgcgaagagacccctccaatgacccaaaattgttcatttctc 12614
Query: 862 caccaatcctcaatgccaacaccactccatc 892
|||||||| ||||||||||||||||||||||
Sbjct: 12615 caccaatcatcaatgccaacaccactccatc 12645
Score = 60.0 bits (30), Expect = 7e-006
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
||||| ||||| || |||| ||||||||| | ||||||||| ||||||||||| || ||
Sbjct: 12294 aggaatgggtaaagatggacgatcacccaaaatgcaaagaagagcttcccgaagaggggt 12353
Query: 598 ccccatgatt 607
||||||||||
Sbjct: 12354 ccccatgatt 12363
Score = 58.0 bits (29), Expect = 3e-005
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 1138 atttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaatt 1197
|||||||| || ||||||||||| || | ||||||| ||||||||||||||||| | |
Sbjct: 12977 atttcaacagacccaagagcccaccgaagaacttggtgaagacgatcagaaagattgagt 13036
Query: 1198 ggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 13037 ggtgcagaacctttgaa 13053
Score = 54.0 bits (27), Expect = 4e-004
Identities = 159/203 (78%)
Strand = Plus / Plus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||||||| ||||||| || | ||||| |||| |||||||| |||
Sbjct: 14790 ttgcagaaaggaacccatttctttgcaaattcagatgtttcggataatgcttcaaatgtc 14849
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | ||| |||||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 14850 agcattgcagcaccatcatcagagacatagcatgaaaccttatcaactggataatctacc 14909
Query: 2492 gcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatccact 2551
|| || || || || |||||||| | || | | |||||||||||| | ||||| ||
Sbjct: 14910 gcgaggatagatagaacagtgtttgctgtgaccaaaggaggttccttcaagggatcaaca 14969
Query: 2552 gtactaacaaagacatcgattgg 2574
||||| ||||||| |||||||||
Sbjct: 14970 gtactgacaaagaaatcgattgg 14992
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2006 ttcatggcaccagccttcttgtg 2028
|||||||||||||||||||||||
Sbjct: 14228 ttcatggcaccagccttcttgtg 14250
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
Length = 17249721
Score = 93.7 bits (47), Expect = 5e-016
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 802 tggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctc 861
||||||| ||||||||| || | |||| || |||||||||||||| || |||||||||
Sbjct: 1469646 tggaacaaagcaaagaggtgcgaagagacccctccaatgacccaaaattgttcatttctc 1469705
Query: 862 caccaatcctcaatgccaacaccactccatc 892
|||||||| ||||||||||||||||||||||
Sbjct: 1469706 caccaatcatcaatgccaacaccactccatc 1469736
Score = 60.0 bits (30), Expect = 7e-006
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
||||| ||||| || |||| ||||||||| | ||||||||| ||||||||||| || ||
Sbjct: 1469385 aggaatgggtaaagatggacgatcacccaaaatgcaaagaagagcttcccgaagaggggt 1469444
Query: 598 ccccatgatt 607
||||||||||
Sbjct: 1469445 ccccatgatt 1469454
Score = 58.0 bits (29), Expect = 3e-005
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 1138 atttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaatt 1197
|||||||| || ||||||||||| || | ||||||| ||||||||||||||||| | |
Sbjct: 1470068 atttcaacagacccaagagcccaccgaagaacttggtgaagacgatcagaaagattgagt 1470127
Query: 1198 ggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 1470128 ggtgcagaacctttgaa 1470144
Score = 54.0 bits (27), Expect = 4e-004
Identities = 159/203 (78%)
Strand = Plus / Plus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||||||| ||||||| || | ||||| |||| |||||||| |||
Sbjct: 1471881 ttgcagaaaggaacccatttctttgcaaattcagatgtttcggataatgcttcaaatgtc 1471940
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | ||| |||||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 1471941 agcattgcagcaccatcatcagagacatagcatgaaaccttatcaactggataatctacc 1472000
Query: 2492 gcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatccact 2551
|| || || || || |||||||| | || | | |||||||||||| | ||||| ||
Sbjct: 1472001 gcgaggatagatagaacagtgtttgctgtgaccaaaggaggttccttcaagggatcaaca 1472060
Query: 2552 gtactaacaaagacatcgattgg 2574
||||| ||||||| |||||||||
Sbjct: 1472061 gtactgacaaagaaatcgattgg 1472083
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2006 ttcatggcaccagccttcttgtg 2028
|||||||||||||||||||||||
Sbjct: 1471319 ttcatggcaccagccttcttgtg 1471341
>gb|CH401223.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000060 genomic
scaffold, whole genome shotgun sequence
Length = 1552265
Score = 93.7 bits (47), Expect = 5e-016
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 802 tggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctc 861
||||||| ||||||||| || | |||| || |||||||||||||| || |||||||||
Sbjct: 1442374 tggaacaaagcaaagaggtgcgaagagacccctccaatgacccaaaattgttcatttctc 1442433
Query: 862 caccaatcctcaatgccaacaccactccatc 892
|||||||| ||||||||||||||||||||||
Sbjct: 1442434 caccaatcatcaatgccaacaccactccatc 1442464
Score = 60.0 bits (30), Expect = 7e-006
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
||||| ||||| || |||| ||||||||| | ||||||||| ||||||||||| || ||
Sbjct: 1442113 aggaatgggtaaagatggacgatcacccaaaatgcaaagaagagcttcccgaagaggggt 1442172
Query: 598 ccccatgatt 607
||||||||||
Sbjct: 1442173 ccccatgatt 1442182
Score = 58.0 bits (29), Expect = 3e-005
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 1138 atttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaatt 1197
|||||||| || ||||||||||| || | ||||||| ||||||||||||||||| | |
Sbjct: 1442796 atttcaacagacccaagagcccaccgaagaacttggtgaagacgatcagaaagattgagt 1442855
Query: 1198 ggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 1442856 ggtgcagaacctttgaa 1442872
Score = 54.0 bits (27), Expect = 4e-004
Identities = 159/203 (78%)
Strand = Plus / Plus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||||||| ||||||| || | ||||| |||| |||||||| |||
Sbjct: 1444609 ttgcagaaaggaacccatttctttgcaaattcagatgtttcggataatgcttcaaatgtc 1444668
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | ||| |||||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 1444669 agcattgcagcaccatcatcagagacatagcatgaaaccttatcaactggataatctacc 1444728
Query: 2492 gcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatccact 2551
|| || || || || |||||||| | || | | |||||||||||| | ||||| ||
Sbjct: 1444729 gcgaggatagatagaacagtgtttgctgtgaccaaaggaggttccttcaagggatcaaca 1444788
Query: 2552 gtactaacaaagacatcgattgg 2574
||||| ||||||| |||||||||
Sbjct: 1444789 gtactgacaaagaaatcgattgg 1444811
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2006 ttcatggcaccagccttcttgtg 2028
|||||||||||||||||||||||
Sbjct: 1444047 ttcatggcaccagccttcttgtg 1444069
>gb|AU184340.1|AU184340 AU184340 Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R2006, mRNA sequence
Length = 452
Score = 89.7 bits (45), Expect = 8e-015
Identities = 170/212 (80%)
Strand = Plus / Minus
Query: 1135 agaatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagatta 1194
||||||||||| |||||||| ||||| | | ||||||||| |||||||| ||||||||
Sbjct: 220 agaatttcaacagaaccaagtgcccaccnaagcacttggttaagacgatctgaaagattg 161
Query: 1195 attggagcagaacccttgaagcaaggccgaagtggcatgcagtagatggatatccaacct 1254
|| |||||||| |||||||| || || |||||||||||||| ||| |||| |||
Sbjct: 160 ataggagcagaccccttgaaagctgggcgcttgggcatgcagtagattgatctccagcct 101
Query: 1255 cttgcatgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccg 1314
| |||||||||||||| ||||| | ||||||||| || || || || || ||||| ||
Sbjct: 100 cgcgcatgcatcttgaatccagtgagaatatcttctgtcacggaaccgtagatccaccca 41
Query: 1315 atctctttcccccattctgttttatcctcata 1346
||||| | |||||||| || || ||||||||
Sbjct: 40 atctcagttccccattcggtcttgtcctcata 9
Score = 40.1 bits (20), Expect = 6.5
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 1030 gggatagatgtaattggataaacaatggtgttgatgtatgccagtctctcca 1081
||||| ||||| | |||||||| | ||||||||||||| || | ||||||||
Sbjct: 325 gggatcgatgtcaatggataaatagtggtgttgatgtaggcaaatctctcca 274
>gb|CV728643.1|CV728643 FLO--01-B11.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--01-B11,
mRNA sequence
Length = 319
Score = 89.7 bits (45), Expect = 8e-015
Identities = 132/161 (81%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| | || ||||| ||||| || || |||| ||||||
Sbjct: 277 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 218
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||| ||||| || || ||||||||| |||||||||| ||||| ||||| ||||||
Sbjct: 217 agcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtag 158
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaa 590
||||||||||| ||||||| | ||||| |||||||||||
Sbjct: 157 aggtggaggatgacccagaaggagaagaagagcttcccgaa 117
>dbj|AK072259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009D02, full
insert sequence
Length = 3426
Score = 89.7 bits (45), Expect = 8e-015
Identities = 132/161 (81%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| | || ||||| ||||| || || |||| ||||||
Sbjct: 3176 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 3117
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||| ||||| || || ||||||||| |||||||||| ||||| ||||| ||||||
Sbjct: 3116 agcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtag 3057
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaa 590
||||||||||| ||||||| | ||||| |||||||||||
Sbjct: 3056 aggtggaggatgacccagaaggagaagaagagcttcccgaa 3016
>dbj|AK120265.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047D23, full
insert sequence
Length = 612
Score = 89.7 bits (45), Expect = 8e-015
Identities = 132/161 (81%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| | || ||||| ||||| || || |||| ||||||
Sbjct: 402 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 343
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||| ||||| || || ||||||||| |||||||||| ||||| ||||| ||||||
Sbjct: 342 agcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtag 283
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaa 590
||||||||||| ||||||| | ||||| |||||||||||
Sbjct: 282 aggtggaggatgacccagaaggagaagaagagcttcccgaa 242
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete
sequence
Length = 162339
Score = 89.7 bits (45), Expect = 8e-015
Identities = 132/161 (81%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| | || ||||| ||||| || || |||| ||||||
Sbjct: 95863 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 95804
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||| ||||| || || ||||||||| |||||||||| ||||| ||||| ||||||
Sbjct: 95803 agcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtag 95744
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaa 590
||||||||||| ||||||| | ||||| |||||||||||
Sbjct: 95743 aggtggaggatgacccagaaggagaagaagagcttcccgaa 95703
>gb|AACV01021752.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021752, whole
genome shotgun sequence
Length = 96066
Score = 89.7 bits (45), Expect = 8e-015
Identities = 132/161 (81%)
Strand = Plus / Plus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| | || ||||| ||||| || || |||| ||||||
Sbjct: 28207 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 28266
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||| ||||| || || ||||||||| |||||||||| ||||| ||||| ||||||
Sbjct: 28267 agcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtag 28326
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaa 590
||||||||||| ||||||| | ||||| |||||||||||
Sbjct: 28327 aggtggaggatgacccagaaggagaagaagagcttcccgaa 28367
>ref|NM_196933.1| Oryza sativa (japonica cultivar-group) putative cellulose synthase
(OSJNBa0006L06.10), mRNA
Length = 3408
Score = 89.7 bits (45), Expect = 8e-015
Identities = 132/161 (81%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| | || ||||| ||||| || || |||| ||||||
Sbjct: 3143 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 3084
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||| ||||| || || ||||||||| |||||||||| ||||| ||||| ||||||
Sbjct: 3083 agcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtag 3024
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaa 590
||||||||||| ||||||| | ||||| |||||||||||
Sbjct: 3023 aggtggaggatgacccagaaggagaagaagagcttcccgaa 2983
>ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4809259
Score = 89.7 bits (45), Expect = 8e-015
Identities = 132/161 (81%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| | || ||||| ||||| || || |||| ||||||
Sbjct: 3483777 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 3483718
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||| ||||| || || ||||||||| |||||||||| ||||| ||||| ||||||
Sbjct: 3483717 agcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtag 3483658
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaa 590
||||||||||| ||||||| | ||||| |||||||||||
Sbjct: 3483657 aggtggaggatgacccagaaggagaagaagagcttcccgaa 3483617
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 89.7 bits (45), Expect = 8e-015
Identities = 132/161 (81%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| | || ||||| ||||| || || |||| ||||||
Sbjct: 4666246 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 4666187
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||| ||||| || || ||||||||| |||||||||| ||||| ||||| ||||||
Sbjct: 4666186 agcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtag 4666127
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaa 590
||||||||||| ||||||| | ||||| |||||||||||
Sbjct: 4666126 aggtggaggatgacccagaaggagaagaagagcttcccgaa 4666086
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 89.7 bits (45), Expect = 8e-015
Identities = 132/161 (81%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| | || ||||| ||||| || || |||| ||||||
Sbjct: 15532040 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 15531981
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||| ||||| || || ||||||||| |||||||||| ||||| ||||| ||||||
Sbjct: 15531980 agcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtag 15531921
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaa 590
||||||||||| ||||||| | ||||| |||||||||||
Sbjct: 15531920 aggtggaggatgacccagaaggagaagaagagcttcccgaa 15531880
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 89.7 bits (45), Expect = 8e-015
Identities = 132/161 (81%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| | || ||||| ||||| || || |||| ||||||
Sbjct: 16751346 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 16751287
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||| ||||| || || ||||||||| |||||||||| ||||| ||||| ||||||
Sbjct: 16751286 agcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtag 16751227
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaa 590
||||||||||| ||||||| | ||||| |||||||||||
Sbjct: 16751226 aggtggaggatgacccagaaggagaagaagagcttcccgaa 16751186
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 89.7 bits (45), Expect = 8e-015
Identities = 132/161 (81%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||||||||||||| | ||||| | || ||||| ||||| || || |||| ||||||
Sbjct: 16760386 atgaaggggtcgatcctgacccagacgagggagaagatggaggcgaggaggatggaccag 16760327
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||| ||||| || || ||||||||| |||||||||| ||||| ||||| ||||||
Sbjct: 16760326 agcacgacaatggtgggcgtccggttctgcctccccatgagccccttgaggaaggggtag 16760267
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaa 590
||||||||||| ||||||| | ||||| |||||||||||
Sbjct: 16760266 aggtggaggatgacccagaaggagaagaagagcttcccgaa 16760226
>dbj|AG214135.1| Oryza sativa (japonica cultivar-group) DNA, clone:T12826T, 3'
flanking sequence of Tos17 insertion in rice strain
NE1042, genomic survey sequence
Length = 690
Score = 87.7 bits (44), Expect = 3e-014
Identities = 158/196 (80%)
Strand = Plus / Plus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||||||||| ||||||||| |||| ||||| ||||| ||||| | || | ||||||
Sbjct: 15 ttcttgcaaaatggaacccatctcctagcaaattctgctgtttccgcaagtgattcaaat 74
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|| | |||||| ||||| || || || || ||||| || | || ||||| || || |||
Sbjct: 75 gtgagcatagccgaaccatcgtctgacacgtaacacgaaatcttctcaactggatagtcc 134
Query: 2489 acagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcc 2548
|| |||||||||||||| ||||| || |||| ||||||||||| || || | |||||||
Sbjct: 135 acggcaagaatggacagaacagtattcgcagtgattagaggaggctctttcaatggatcc 194
Query: 2549 actgtactaacaaaga 2564
|||||||| |||||||
Sbjct: 195 actgtactgacaaaga 210
Score = 50.1 bits (25), Expect = 0.007
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 2630 taagtttcacggttgataggataccactttgggaactgatc 2670
|||||||| || ||||||||| ||||||| |||||||||||
Sbjct: 373 taagtttcgcgattgataggacaccacttggggaactgatc 413
>gb|CB648832.1|CB648832 OSJNEb12G21.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12G21 5', mRNA sequence
Length = 800
Score = 87.7 bits (44), Expect = 3e-014
Identities = 158/196 (80%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||||||||| ||||||||| |||| ||||| ||||| ||||| | || | ||||||
Sbjct: 553 ttcttgcaaaatggaacccatctcctagcaaattctgctgtttccgcaagtgattcaaat 494
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|| | |||||| ||||| || || || || ||||| || | || ||||| || || |||
Sbjct: 493 gtgagcatagccgaaccatcgtctgacacgtaacacgaaatcttctcaactggatagtcc 434
Query: 2489 acagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcc 2548
|| |||||||||||||| ||||| || |||| ||||||||||| || || | |||||||
Sbjct: 433 acggcaagaatggacagaacagtattcgcagtgattagaggaggctctttcaatggatcc 374
Query: 2549 actgtactaacaaaga 2564
|||||||| |||||||
Sbjct: 373 actgtactgacaaaga 358
Score = 50.1 bits (25), Expect = 0.007
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2630 taagtttcacggttgataggataccactttgggaactgatc 2670
|||||||| || ||||||||| ||||||| |||||||||||
Sbjct: 295 taagtttcgcgattgataggacaccacttggggaactgatc 255
>gb|AACV01002349.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002349, whole
genome shotgun sequence
Length = 8745
Score = 87.7 bits (44), Expect = 3e-014
Identities = 158/196 (80%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||||||||| ||||||||| |||| ||||| ||||| ||||| | || | ||||||
Sbjct: 1102 ttcttgcaaaatggaacccatctcctagcaaattctgctgtttccgcaagtgattcaaat 1043
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|| | |||||| ||||| || || || || ||||| || | || ||||| || || |||
Sbjct: 1042 gtgagcatagccgaaccatcgtctgacacgtaacacgaaatcttctcaactggatagtcc 983
Query: 2489 acagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcc 2548
|| |||||||||||||| ||||| || |||| ||||||||||| || || | |||||||
Sbjct: 982 acggcaagaatggacagaacagtattcgcagtgattagaggaggctctttcaatggatcc 923
Query: 2549 actgtactaacaaaga 2564
|||||||| |||||||
Sbjct: 922 actgtactgacaaaga 907
Score = 65.9 bits (33), Expect = 1e-007
Identities = 153/193 (79%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||| ||||||||||| ||||| || || ||||| | ||| || || ||||| |||||
Sbjct: 4148 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 4089
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||||||||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 4088 agcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggtac 4029
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattgg 609
| ||| | ||||||||| || || ||||||| ||| ||||| || || ||||| || | |
Sbjct: 4028 aagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggactcg 3969
Query: 610 tagccactgttga 622
||||| |||||||
Sbjct: 3968 tagccgctgttga 3956
Score = 50.1 bits (25), Expect = 0.007
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2630 taagtttcacggttgataggataccactttgggaactgatc 2670
|||||||| || ||||||||| ||||||| |||||||||||
Sbjct: 744 taagtttcgcgattgataggacaccacttggggaactgatc 704
Score = 44.1 bits (22), Expect = 0.42
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 1141 tcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattgga 1200
||||| ||||| |||||||| || | || |||| ||||||||||||||| || |||||
Sbjct: 3345 tcaacggaaccgagagcccaccggagaacctggtggagacgatcagaaaggttgattggc 3286
Query: 1201 gcagaacccttgaa 1214
|| || ||||||||
Sbjct: 3285 gctgatcccttgaa 3272
Score = 44.1 bits (22), Expect = 0.42
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 1715 tgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgccatctagaccc 1774
||||||| |||||| || || |||||||||||||| || ||||| | |||||| || ||
Sbjct: 2620 tgcctatagaaacaacaaccagttcccacataaaccggaccttggaggccatcaagccct 2561
Query: 1775 ttcatattaa 1784
||||| ||||
Sbjct: 2560 ttcatgttaa 2551
Score = 40.1 bits (20), Expect = 6.5
Identities = 63/78 (80%)
Strand = Plus / Minus
Query: 2126 tggatcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatg 2185
||||||||||| || || || | |||||| ||||||||||| || || ||||| |||
Sbjct: 1433 tggatcattccagggtggtcacgagggttgttcccaggccatggtgtcccatcttgcata 1374
Query: 2186 gtccagccctcctcaggt 2203
||||||| |||||||||
Sbjct: 1373 atccagccttcctcaggt 1356
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 87.7 bits (44), Expect = 3e-014
Identities = 158/196 (80%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||||||||| ||||||||| |||| ||||| ||||| ||||| | || | ||||||
Sbjct: 31499140 ttcttgcaaaatggaacccatctcctagcaaattctgctgtttccgcaagtgattcaaat 31499081
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|| | |||||| ||||| || || || || ||||| || | || ||||| || || |||
Sbjct: 31499080 gtgagcatagccgaaccatcgtctgacacgtaacacgaaatcttctcaactggatagtcc 31499021
Query: 2489 acagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcc 2548
|| |||||||||||||| ||||| || |||| ||||||||||| || || | |||||||
Sbjct: 31499020 acggcaagaatggacagaacagtattcgcagtgattagaggaggctctttcaatggatcc 31498961
Query: 2549 actgtactaacaaaga 2564
|||||||| |||||||
Sbjct: 31498960 actgtactgacaaaga 31498945
Score = 65.9 bits (33), Expect = 1e-007
Identities = 153/193 (79%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||| ||||||||||| ||||| || || ||||| | ||| || || ||||| |||||
Sbjct: 31502186 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 31502127
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||||||||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 31502126 agcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggtac 31502067
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattgg 609
| ||| | ||||||||| || || ||||||| ||| ||||| || || ||||| || | |
Sbjct: 31502066 aagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggactcg 31502007
Query: 610 tagccactgttga 622
||||| |||||||
Sbjct: 31502006 tagccgctgttga 31501994
Score = 50.1 bits (25), Expect = 0.007
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2630 taagtttcacggttgataggataccactttgggaactgatc 2670
|||||||| || ||||||||| ||||||| |||||||||||
Sbjct: 31498782 taagtttcgcgattgataggacaccacttggggaactgatc 31498742
Score = 44.1 bits (22), Expect = 0.42
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 1141 tcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattgga 1200
||||| ||||| |||||||| || | || |||| ||||||||||||||| || |||||
Sbjct: 31501383 tcaacggaaccgagagcccaccggagaacctggtggagacgatcagaaaggttgattggc 31501324
Query: 1201 gcagaacccttgaa 1214
|| || ||||||||
Sbjct: 31501323 gctgatcccttgaa 31501310
Score = 44.1 bits (22), Expect = 0.42
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 1715 tgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgccatctagaccc 1774
||||||| |||||| || || |||||||||||||| || ||||| | |||||| || ||
Sbjct: 31500658 tgcctatagaaacaacaaccagttcccacataaaccggaccttggaggccatcaagccct 31500599
Query: 1775 ttcatattaa 1784
||||| ||||
Sbjct: 31500598 ttcatgttaa 31500589
Score = 40.1 bits (20), Expect = 6.5
Identities = 63/78 (80%)
Strand = Plus / Minus
Query: 2126 tggatcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatg 2185
||||||||||| || || || | |||||| ||||||||||| || || ||||| |||
Sbjct: 31499471 tggatcattccagggtggtcacgagggttgttcccaggccatggtgtcccatcttgcata 31499412
Query: 2186 gtccagccctcctcaggt 2203
||||||| |||||||||
Sbjct: 31499411 atccagccttcctcaggt 31499394
>ref|NM_191233.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2820
Score = 87.7 bits (44), Expect = 3e-014
Identities = 158/196 (80%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||||||||| ||||||||| |||| ||||| ||||| ||||| | || | ||||||
Sbjct: 998 ttcttgcaaaatggaacccatctcctagcaaattctgctgtttccgcaagtgattcaaat 939
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|| | |||||| ||||| || || || || ||||| || | || ||||| || || |||
Sbjct: 938 gtgagcatagccgaaccatcgtctgacacgtaacacgaaatcttctcaactggatagtcc 879
Query: 2489 acagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcc 2548
|| |||||||||||||| ||||| || |||| ||||||||||| || || | |||||||
Sbjct: 878 acggcaagaatggacagaacagtattcgcagtgattagaggaggctctttcaatggatcc 819
Query: 2549 actgtactaacaaaga 2564
|||||||| |||||||
Sbjct: 818 actgtactgacaaaga 803
Score = 65.9 bits (33), Expect = 1e-007
Identities = 153/193 (79%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||| ||||||||||| ||||| || || ||||| | ||| || || ||||| |||||
Sbjct: 2768 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 2709
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||||||||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 2708 agcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggtac 2649
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattgg 609
| ||| | ||||||||| || || ||||||| ||| ||||| || || ||||| || | |
Sbjct: 2648 aagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggactcg 2589
Query: 610 tagccactgttga 622
||||| |||||||
Sbjct: 2588 tagccgctgttga 2576
Score = 54.0 bits (27), Expect = 4e-004
Identities = 114/143 (79%)
Strand = Plus / Minus
Query: 1889 tccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatcacaa 1948
||||||||||||||||| || || | || ||||||||| | || | |||||||||||
Sbjct: 1478 tccatcatgaaacacatcgcttcacgaacagctttgctattgttaacatagtgatcacag 1419
Query: 1949 tccacattaagaagataagcaccattcgtcaggacagctgatacgcgaatcaaagcattc 2008
|| | |||||||| |||| |||| ||||| || || ||||| |||| |||||| |||
Sbjct: 1418 tcaagattaagaatgtaaggggcatttgtcagaactgcggatactcgaaccaaagcgttc 1359
Query: 2009 atggcaccagccttcttgtggtg 2031
||||| || || |||||||||||
Sbjct: 1358 atggcccctgctttcttgtggtg 1336
Score = 50.1 bits (25), Expect = 0.007
Identities = 70/85 (82%)
Strand = Plus / Minus
Query: 1715 tgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgccatctagaccc 1774
||||||| |||||| || || |||||||||||||| || ||||| | |||||| || ||
Sbjct: 1652 tgcctatagaaacaacaaccagttcccacataaaccggaccttggaggccatcaagccct 1593
Query: 1775 ttcatattaatatcaaagaagacaa 1799
||||| |||| |||||||| ||||
Sbjct: 1592 ttcatgttaacgtcaaagaacacaa 1568
Score = 50.1 bits (25), Expect = 0.007
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2630 taagtttcacggttgataggataccactttgggaactgatc 2670
|||||||| || ||||||||| ||||||| |||||||||||
Sbjct: 740 taagtttcgcgattgataggacaccacttggggaactgatc 700
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 87.7 bits (44), Expect = 3e-014
Identities = 158/196 (80%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||||||||| ||||||||| |||| ||||| ||||| ||||| | || | ||||||
Sbjct: 5946523 ttcttgcaaaatggaacccatctcctagcaaattctgctgtttccgcaagtgattcaaat 5946464
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|| | |||||| ||||| || || || || ||||| || | || ||||| || || |||
Sbjct: 5946463 gtgagcatagccgaaccatcgtctgacacgtaacacgaaatcttctcaactggatagtcc 5946404
Query: 2489 acagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcc 2548
|| |||||||||||||| ||||| || |||| ||||||||||| || || | |||||||
Sbjct: 5946403 acggcaagaatggacagaacagtattcgcagtgattagaggaggctctttcaatggatcc 5946344
Query: 2549 actgtactaacaaaga 2564
|||||||| |||||||
Sbjct: 5946343 actgtactgacaaaga 5946328
Score = 65.9 bits (33), Expect = 1e-007
Identities = 153/193 (79%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||| ||||||||||| ||||| || || ||||| | ||| || || ||||| |||||
Sbjct: 5949569 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 5949510
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||||||||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 5949509 agcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggtac 5949450
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattgg 609
| ||| | ||||||||| || || ||||||| ||| ||||| || || ||||| || | |
Sbjct: 5949449 aagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggactcg 5949390
Query: 610 tagccactgttga 622
||||| |||||||
Sbjct: 5949389 tagccgctgttga 5949377
Score = 50.1 bits (25), Expect = 0.007
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2630 taagtttcacggttgataggataccactttgggaactgatc 2670
|||||||| || ||||||||| ||||||| |||||||||||
Sbjct: 5946165 taagtttcgcgattgataggacaccacttggggaactgatc 5946125
Score = 44.1 bits (22), Expect = 0.42
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 1141 tcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattgga 1200
||||| ||||| |||||||| || | || |||| ||||||||||||||| || |||||
Sbjct: 5948766 tcaacggaaccgagagcccaccggagaacctggtggagacgatcagaaaggttgattggc 5948707
Query: 1201 gcagaacccttgaa 1214
|| || ||||||||
Sbjct: 5948706 gctgatcccttgaa 5948693
Score = 44.1 bits (22), Expect = 0.42
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 1715 tgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgccatctagaccc 1774
||||||| |||||| || || |||||||||||||| || ||||| | |||||| || ||
Sbjct: 5948041 tgcctatagaaacaacaaccagttcccacataaaccggaccttggaggccatcaagccct 5947982
Query: 1775 ttcatattaa 1784
||||| ||||
Sbjct: 5947981 ttcatgttaa 5947972
Score = 40.1 bits (20), Expect = 6.5
Identities = 63/78 (80%)
Strand = Plus / Minus
Query: 2126 tggatcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatg 2185
||||||||||| || || || | |||||| ||||||||||| || || ||||| |||
Sbjct: 5946854 tggatcattccagggtggtcacgagggttgttcccaggccatggtgtcccatcttgcata 5946795
Query: 2186 gtccagccctcctcaggt 2203
||||||| |||||||||
Sbjct: 5946794 atccagccttcctcaggt 5946777
>dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0046E05
Length = 162776
Score = 87.7 bits (44), Expect = 3e-014
Identities = 158/196 (80%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||||||||| ||||||||| |||| ||||| ||||| ||||| | || | ||||||
Sbjct: 12534 ttcttgcaaaatggaacccatctcctagcaaattctgctgtttccgcaagtgattcaaat 12475
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|| | |||||| ||||| || || || || ||||| || | || ||||| || || |||
Sbjct: 12474 gtgagcatagccgaaccatcgtctgacacgtaacacgaaatcttctcaactggatagtcc 12415
Query: 2489 acagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcc 2548
|| |||||||||||||| ||||| || |||| ||||||||||| || || | |||||||
Sbjct: 12414 acggcaagaatggacagaacagtattcgcagtgattagaggaggctctttcaatggatcc 12355
Query: 2549 actgtactaacaaaga 2564
|||||||| |||||||
Sbjct: 12354 actgtactgacaaaga 12339
Score = 65.9 bits (33), Expect = 1e-007
Identities = 153/193 (79%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||| ||||||||||| ||||| || || ||||| | ||| || || ||||| |||||
Sbjct: 15580 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 15521
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||||||||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 15520 agcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggtac 15461
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattgg 609
| ||| | ||||||||| || || ||||||| ||| ||||| || || ||||| || | |
Sbjct: 15460 aagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggactcg 15401
Query: 610 tagccactgttga 622
||||| |||||||
Sbjct: 15400 tagccgctgttga 15388
Score = 50.1 bits (25), Expect = 0.007
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2630 taagtttcacggttgataggataccactttgggaactgatc 2670
|||||||| || ||||||||| ||||||| |||||||||||
Sbjct: 12176 taagtttcgcgattgataggacaccacttggggaactgatc 12136
Score = 44.1 bits (22), Expect = 0.42
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 1141 tcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattgga 1200
||||| ||||| |||||||| || | || |||| ||||||||||||||| || |||||
Sbjct: 14777 tcaacggaaccgagagcccaccggagaacctggtggagacgatcagaaaggttgattggc 14718
Query: 1201 gcagaacccttgaa 1214
|| || ||||||||
Sbjct: 14717 gctgatcccttgaa 14704
Score = 44.1 bits (22), Expect = 0.42
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 1715 tgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgccatctagaccc 1774
||||||| |||||| || || |||||||||||||| || ||||| | |||||| || ||
Sbjct: 14052 tgcctatagaaacaacaaccagttcccacataaaccggaccttggaggccatcaagccct 13993
Query: 1775 ttcatattaa 1784
||||| ||||
Sbjct: 13992 ttcatgttaa 13983
Score = 40.1 bits (20), Expect = 6.5
Identities = 63/78 (80%)
Strand = Plus / Minus
Query: 2126 tggatcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatg 2185
||||||||||| || || || | |||||| ||||||||||| || || ||||| |||
Sbjct: 12865 tggatcattccagggtggtcacgagggttgttcccaggccatggtgtcccatcttgcata 12806
Query: 2186 gtccagccctcctcaggt 2203
||||||| |||||||||
Sbjct: 12805 atccagccttcctcaggt 12788
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 87.7 bits (44), Expect = 3e-014
Identities = 158/196 (80%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||||||||| ||||||||| |||| ||||| ||||| ||||| | || | ||||||
Sbjct: 5850246 ttcttgcaaaatggaacccatctcctagcaaattctgctgtttccgcaagtgattcaaat 5850187
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|| | |||||| ||||| || || || || ||||| || | || ||||| || || |||
Sbjct: 5850186 gtgagcatagccgaaccatcgtctgacacgtaacacgaaatcttctcaactggatagtcc 5850127
Query: 2489 acagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcc 2548
|| |||||||||||||| ||||| || |||| ||||||||||| || || | |||||||
Sbjct: 5850126 acggcaagaatggacagaacagtattcgcagtgattagaggaggctctttcaatggatcc 5850067
Query: 2549 actgtactaacaaaga 2564
|||||||| |||||||
Sbjct: 5850066 actgtactgacaaaga 5850051
Score = 65.9 bits (33), Expect = 1e-007
Identities = 153/193 (79%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||| ||||||||||| ||||| || || ||||| | ||| || || ||||| |||||
Sbjct: 5853292 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 5853233
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||||||||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 5853232 agcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggtac 5853173
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattgg 609
| ||| | ||||||||| || || ||||||| ||| ||||| || || ||||| || | |
Sbjct: 5853172 aagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggactcg 5853113
Query: 610 tagccactgttga 622
||||| |||||||
Sbjct: 5853112 tagccgctgttga 5853100
Score = 50.1 bits (25), Expect = 0.007
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2630 taagtttcacggttgataggataccactttgggaactgatc 2670
|||||||| || ||||||||| ||||||| |||||||||||
Sbjct: 5849888 taagtttcgcgattgataggacaccacttggggaactgatc 5849848
Score = 44.1 bits (22), Expect = 0.42
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 1141 tcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattgga 1200
||||| ||||| |||||||| || | || |||| ||||||||||||||| || |||||
Sbjct: 5852489 tcaacggaaccgagagcccaccggagaacctggtggagacgatcagaaaggttgattggc 5852430
Query: 1201 gcagaacccttgaa 1214
|| || ||||||||
Sbjct: 5852429 gctgatcccttgaa 5852416
Score = 44.1 bits (22), Expect = 0.42
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 1715 tgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgccatctagaccc 1774
||||||| |||||| || || |||||||||||||| || ||||| | |||||| || ||
Sbjct: 5851764 tgcctatagaaacaacaaccagttcccacataaaccggaccttggaggccatcaagccct 5851705
Query: 1775 ttcatattaa 1784
||||| ||||
Sbjct: 5851704 ttcatgttaa 5851695
Score = 40.1 bits (20), Expect = 6.5
Identities = 63/78 (80%)
Strand = Plus / Minus
Query: 2126 tggatcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatg 2185
||||||||||| || || || | |||||| ||||||||||| || || ||||| |||
Sbjct: 5850577 tggatcattccagggtggtcacgagggttgttcccaggccatggtgtcccatcttgcata 5850518
Query: 2186 gtccagccctcctcaggt 2203
||||||| |||||||||
Sbjct: 5850517 atccagccttcctcaggt 5850500
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 87.7 bits (44), Expect = 3e-014
Identities = 158/196 (80%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||||||||| ||||||||| |||| ||||| ||||| ||||| | || | ||||||
Sbjct: 31051967 ttcttgcaaaatggaacccatctcctagcaaattctgctgtttccgcaagtgattcaaat 31051908
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|| | |||||| ||||| || || || || ||||| || | || ||||| || || |||
Sbjct: 31051907 gtgagcatagccgaaccatcgtctgacacgtaacacgaaatcttctcaactggatagtcc 31051848
Query: 2489 acagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcc 2548
|| |||||||||||||| ||||| || |||| ||||||||||| || || | |||||||
Sbjct: 31051847 acggcaagaatggacagaacagtattcgcagtgattagaggaggctctttcaatggatcc 31051788
Query: 2549 actgtactaacaaaga 2564
|||||||| |||||||
Sbjct: 31051787 actgtactgacaaaga 31051772
Score = 65.9 bits (33), Expect = 1e-007
Identities = 153/193 (79%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||| ||||||||||| ||||| || || ||||| | ||| || || ||||| |||||
Sbjct: 31055013 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 31054954
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||||||||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 31054953 agcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggtac 31054894
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattgg 609
| ||| | ||||||||| || || ||||||| ||| ||||| || || ||||| || | |
Sbjct: 31054893 aagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggactcg 31054834
Query: 610 tagccactgttga 622
||||| |||||||
Sbjct: 31054833 tagccgctgttga 31054821
Score = 50.1 bits (25), Expect = 0.007
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2630 taagtttcacggttgataggataccactttgggaactgatc 2670
|||||||| || ||||||||| ||||||| |||||||||||
Sbjct: 31051609 taagtttcgcgattgataggacaccacttggggaactgatc 31051569
Score = 44.1 bits (22), Expect = 0.42
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 1141 tcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattgga 1200
||||| ||||| |||||||| || | || |||| ||||||||||||||| || |||||
Sbjct: 31054210 tcaacggaaccgagagcccaccggagaacctggtggagacgatcagaaaggttgattggc 31054151
Query: 1201 gcagaacccttgaa 1214
|| || ||||||||
Sbjct: 31054150 gctgatcccttgaa 31054137
Score = 44.1 bits (22), Expect = 0.42
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 1715 tgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgccatctagaccc 1774
||||||| |||||| || || |||||||||||||| || ||||| | |||||| || ||
Sbjct: 31053485 tgcctatagaaacaacaaccagttcccacataaaccggaccttggaggccatcaagccct 31053426
Query: 1775 ttcatattaa 1784
||||| ||||
Sbjct: 31053425 ttcatgttaa 31053416
Score = 40.1 bits (20), Expect = 6.5
Identities = 63/78 (80%)
Strand = Plus / Minus
Query: 2126 tggatcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatg 2185
||||||||||| || || || | |||||| ||||||||||| || || ||||| |||
Sbjct: 31052298 tggatcattccagggtggtcacgagggttgttcccaggccatggtgtcccatcttgcata 31052239
Query: 2186 gtccagccctcctcaggt 2203
||||||| |||||||||
Sbjct: 31052238 atccagccttcctcaggt 31052221
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 87.7 bits (44), Expect = 3e-014
Identities = 158/196 (80%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||||||||| ||||||||| |||| ||||| ||||| ||||| | || | ||||||
Sbjct: 31418470 ttcttgcaaaatggaacccatctcctagcaaattctgctgtttccgcaagtgattcaaat 31418411
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|| | |||||| ||||| || || || || ||||| || | || ||||| || || |||
Sbjct: 31418410 gtgagcatagccgaaccatcgtctgacacgtaacacgaaatcttctcaactggatagtcc 31418351
Query: 2489 acagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcc 2548
|| |||||||||||||| ||||| || |||| ||||||||||| || || | |||||||
Sbjct: 31418350 acggcaagaatggacagaacagtattcgcagtgattagaggaggctctttcaatggatcc 31418291
Query: 2549 actgtactaacaaaga 2564
|||||||| |||||||
Sbjct: 31418290 actgtactgacaaaga 31418275
Score = 65.9 bits (33), Expect = 1e-007
Identities = 153/193 (79%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||| ||||||||||| ||||| || || ||||| | ||| || || ||||| |||||
Sbjct: 31421516 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 31421457
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||||||||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 31421456 agcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggtac 31421397
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattgg 609
| ||| | ||||||||| || || ||||||| ||| ||||| || || ||||| || | |
Sbjct: 31421396 aagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggactcg 31421337
Query: 610 tagccactgttga 622
||||| |||||||
Sbjct: 31421336 tagccgctgttga 31421324
Score = 50.1 bits (25), Expect = 0.007
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2630 taagtttcacggttgataggataccactttgggaactgatc 2670
|||||||| || ||||||||| ||||||| |||||||||||
Sbjct: 31418112 taagtttcgcgattgataggacaccacttggggaactgatc 31418072
Score = 44.1 bits (22), Expect = 0.42
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 1141 tcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattgga 1200
||||| ||||| |||||||| || | || |||| ||||||||||||||| || |||||
Sbjct: 31420713 tcaacggaaccgagagcccaccggagaacctggtggagacgatcagaaaggttgattggc 31420654
Query: 1201 gcagaacccttgaa 1214
|| || ||||||||
Sbjct: 31420653 gctgatcccttgaa 31420640
Score = 44.1 bits (22), Expect = 0.42
Identities = 58/70 (82%)
Strand = Plus / Minus
Query: 1715 tgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgccatctagaccc 1774
||||||| |||||| || || |||||||||||||| || ||||| | |||||| || ||
Sbjct: 31419988 tgcctatagaaacaacaaccagttcccacataaaccggaccttggaggccatcaagccct 31419929
Query: 1775 ttcatattaa 1784
||||| ||||
Sbjct: 31419928 ttcatgttaa 31419919
Score = 40.1 bits (20), Expect = 6.5
Identities = 63/78 (80%)
Strand = Plus / Minus
Query: 2126 tggatcattccnggatgatctctagggttattcccaggccanggagtgccatcagccatg 2185
||||||||||| || || || | |||||| ||||||||||| || || ||||| |||
Sbjct: 31418801 tggatcattccagggtggtcacgagggttgttcccaggccatggtgtcccatcttgcata 31418742
Query: 2186 gtccagccctcctcaggt 2203
||||||| |||||||||
Sbjct: 31418741 atccagccttcctcaggt 31418724
>dbj|AK100914.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133D04, full
insert sequence
Length = 3746
Score = 85.7 bits (43), Expect = 1e-013
Identities = 235/299 (78%)
Strand = Plus / Minus
Query: 1754 ccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggtttgca 1813
|||||||| ||||| ||||| ||||| || ||||| || ||||||| ||||||||| |||
Sbjct: 1954 ccttgaattccatccagacctttcatgttgatatcgaaaaagacaacgttccggttagca 1895
Query: 1814 tatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagttttc 1873
||||||||||| ||| ||||||||||| || || || ||||| |||||||| ||||
Sbjct: 1894 tatcgatcatgtcggtcaataccatcaaacctctgagggaactgcacatagcacactttc 1835
Query: 1874 cttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgctattg 1933
| || | |||||||||||||||||||| || || || | || ||||| | |||
Sbjct: 1834 ttccccaccaaaggatccatcatgaaacacatcgcttcccttatggccttgctattgttg 1775
Query: 1934 aagtagtgatcacaatccacattaagaagataagcaccattcgtcaggacagctgatacg 1993
| ||||||||||||||||| || | || || | | |||||| || ||||| || |||
Sbjct: 1774 atgtagtgatcacaatccaagttcaataggtatggagcattcgaaagaacagcagagacg 1715
Query: 1994 cgaatcaaagcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttc 2052
|| | ||| |||||||| |||||||||||||| || || | ||||||||||||||||
Sbjct: 1714 cggaccaatgcattcatagcaccagccttcttatgatgattatagcctggcctcttttc 1656
Score = 75.8 bits (38), Expect = 1e-010
Identities = 80/94 (85%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| ||||| |||||||||| ||| || |||||||||||||||||||||||
Sbjct: 2926 ccttggaatacagcgaagagatgtgaagaaacacctccaatgacccaaaactgctcattc 2867
Query: 859 ctccaccaatcctcaatgccaacaccactccatc 892
|||||||| || || ||| | |||||||||||||
Sbjct: 2866 ctccaccagtcatcgatggccacaccactccatc 2833
Score = 69.9 bits (35), Expect = 7e-009
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactg 618
|||||||||| ||||||||| ||||||||||| || || |||||||||| || ||| ||
Sbjct: 3163 atcacccagaatgcaaagaagagcttcccgaacagaggtccccatgattcatatccattg 3104
Query: 619 ttgatagcatacgacactccagc 641
|||||||||| || ||||||||
Sbjct: 3103 ttgatagcattagaaactccagc 3081
Score = 61.9 bits (31), Expect = 2e-006
Identities = 106/131 (80%)
Strand = Plus / Minus
Query: 2447 tcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggacagg 2506
|||||||||||||| || || || || ||||| ||||||||||||| ||| ||||| |||
Sbjct: 1261 tcatcagaaacatagcaggaaaccttttcaactgggtaatccacagaaaggatggaaagg 1202
Query: 2507 acagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaagaca 2566
|| ||||| | || | || ||||||||||| |||||| |||||||| |||||||
Sbjct: 1201 acggtgtttgctgtgactaagggaggttccttcgatggatcaactgtactgacaaagaag 1142
Query: 2567 tcgattggagc 2577
|||| ||||||
Sbjct: 1141 tcgactggagc 1131
Score = 44.1 bits (22), Expect = 0.42
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 1137 aatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaat 1196
||||||||| || ||||||||||| || | || |||| |||||||| ||||||||||
Sbjct: 2588 aatttcaacagatccaagagcccaacgaaggacctggtgaagacgatccgaaagattaag 2529
Query: 1197 tggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 2528 aggtgcagaacctttgaa 2511
>ref|XM_477282.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 3746
Score = 85.7 bits (43), Expect = 1e-013
Identities = 235/299 (78%)
Strand = Plus / Minus
Query: 1754 ccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggtttgca 1813
|||||||| ||||| ||||| ||||| || ||||| || ||||||| ||||||||| |||
Sbjct: 1954 ccttgaattccatccagacctttcatgttgatatcgaaaaagacaacgttccggttagca 1895
Query: 1814 tatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagttttc 1873
||||||||||| ||| ||||||||||| || || || ||||| |||||||| ||||
Sbjct: 1894 tatcgatcatgtcggtcaataccatcaaacctctgagggaactgcacatagcacactttc 1835
Query: 1874 cttcctagtgctggatccatcatgaaacacatagcctctctaagagctttgctgctattg 1933
| || | |||||||||||||||||||| || || || | || ||||| | |||
Sbjct: 1834 ttccccaccaaaggatccatcatgaaacacatcgcttcccttatggccttgctattgttg 1775
Query: 1934 aagtagtgatcacaatccacattaagaagataagcaccattcgtcaggacagctgatacg 1993
| ||||||||||||||||| || | || || | | |||||| || ||||| || |||
Sbjct: 1774 atgtagtgatcacaatccaagttcaataggtatggagcattcgaaagaacagcagagacg 1715
Query: 1994 cgaatcaaagcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttc 2052
|| | ||| |||||||| |||||||||||||| || || | ||||||||||||||||
Sbjct: 1714 cggaccaatgcattcatagcaccagccttcttatgatgattatagcctggcctcttttc 1656
Score = 75.8 bits (38), Expect = 1e-010
Identities = 80/94 (85%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| ||||| |||||||||| ||| || |||||||||||||||||||||||
Sbjct: 2926 ccttggaatacagcgaagagatgtgaagaaacacctccaatgacccaaaactgctcattc 2867
Query: 859 ctccaccaatcctcaatgccaacaccactccatc 892
|||||||| || || ||| | |||||||||||||
Sbjct: 2866 ctccaccagtcatcgatggccacaccactccatc 2833
Score = 69.9 bits (35), Expect = 7e-009
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactg 618
|||||||||| ||||||||| ||||||||||| || || |||||||||| || ||| ||
Sbjct: 3163 atcacccagaatgcaaagaagagcttcccgaacagaggtccccatgattcatatccattg 3104
Query: 619 ttgatagcatacgacactccagc 641
|||||||||| || ||||||||
Sbjct: 3103 ttgatagcattagaaactccagc 3081
Score = 67.9 bits (34), Expect = 3e-008
Identities = 154/194 (79%)
Strand = Plus / Minus
Query: 2384 acccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaa 2443
||||||||| ||||||| || | ||||| || || |||||||| || | ||| || | |
Sbjct: 1324 acccatttctttgcaaattcagatgtttctgacagtgcttcaaatgtgagcattgcagca 1265
Query: 2444 ccgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggac 2503
|| |||||||||||||| || || || || ||||| ||||||||||||| ||| |||||
Sbjct: 1264 ccatcatcagaaacatagcaggaaaccttttcaactgggtaatccacagaaaggatggaa 1205
Query: 2504 aggacagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaag 2563
||||| ||||| | || | || ||||||||||| |||||| |||||||| ||||||
Sbjct: 1204 aggacggtgtttgctgtgactaagggaggttccttcgatggatcaactgtactgacaaag 1145
Query: 2564 acatcgattggagc 2577
| |||| ||||||
Sbjct: 1144 aagtcgactggagc 1131
Score = 44.1 bits (22), Expect = 0.42
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 1137 aatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaat 1196
||||||||| || ||||||||||| || | || |||| |||||||| ||||||||||
Sbjct: 2588 aatttcaacagatccaagagcccaacgaaggacctggtgaagacgatccgaaagattaag 2529
Query: 1197 tggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 2528 aggtgcagaacctttgaa 2511
>gb|D40673.1|D40673 RICS2778A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 357
Score = 79.8 bits (40), Expect = 8e-012
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 511 cggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccagatt 570
||||||||| |||||||||| ||||| ||||| ||||||||||||| ||| |||||||
Sbjct: 163 cggttctgcctccccatgagccccttgaggaaggggtagaggtggacgatgacccagaag 104
Query: 571 gcaaagaacagcttcccgaa 590
|| ||||| |||||||||||
Sbjct: 103 gcgaagaagagcttcccgaa 84
>gb|AU032362.1|AU032362 AU032362 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3939_1A, mRNA sequence
Length = 460
Score = 79.8 bits (40), Expect = 8e-012
Identities = 76/88 (86%)
Strand = Plus / Minus
Query: 802 tggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcatttctc 861
||||||| ||||||||| || | |||| || |||||||||||||| || |||||||||
Sbjct: 230 tggaacaaagcaaagaggtgcgaagagacccctccaatgacccaaaattgttcatttctc 171
Query: 862 caccaatcctcaatgccaacaccactcc 889
|||||||| ||||||||||||| |||||
Sbjct: 170 caccaatcatcaatgccaacacaactcc 143
>gb|AU082309.1|AU082309 AU082309 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1220, mRNA sequence
Length = 658
Score = 79.8 bits (40), Expect = 8e-012
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 511 cggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccagatt 570
||||||||| |||||||||| ||||| ||||| ||||||||||||| ||| |||||||
Sbjct: 312 cggttctgcctccccatgagccccttgaggaaggggtagaggtggacgatgacccagaag 253
Query: 571 gcaaagaacagcttcccgaa 590
|| ||||| |||||||||||
Sbjct: 252 gcgaagaagagcttcccgaa 233
>gb|CB636279.1|CB636279 OSJNEa01J02.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa01J02 5', mRNA sequence
Length = 579
Score = 79.8 bits (40), Expect = 8e-012
Identities = 103/124 (83%)
Strand = Plus / Minus
Query: 2573 ggagccaactgggatggctcaccctccctatcatatctcaatgcaagtctatcgaggtaa 2632
|||||||| || ||||| ||||| |||| ||||| || || || || ||||| ||||||
Sbjct: 505 ggagccaattgagatggttcaccttcccggtcataccttaaagccagcctatccaggtaa 446
Query: 2633 gtttcacggttgataggataccactttgggaactgatctagaagccaagacaaagcaaac 2692
|||||||||||||| || ||||||| ||||||||||| |||| ||| || | |||||||
Sbjct: 445 gtttcacggttgattggggaccacttggggaactgatccagaatccaggatagagcaaac 386
Query: 2693 caaa 2696
||||
Sbjct: 385 caaa 382
>gb|CB643325.1|CB643325 OSJNEb03P11.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03P11 3', mRNA sequence
Length = 792
Score = 79.8 bits (40), Expect = 8e-012
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 511 cggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccagatt 570
||||||||| |||||||||| ||||| ||||| ||||||||||||| ||| |||||||
Sbjct: 314 cggttctgcctccccatgagccccttgaggaaggggtagaggtggacgatgacccagaag 373
Query: 571 gcaaagaacagcttcccgaa 590
|| ||||| |||||||||||
Sbjct: 374 gcgaagaagagcttcccgaa 393
Score = 42.1 bits (21), Expect = 1.7
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 740 cggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcac 788
|||| ||||| || ||||| |||||||| ||||||||||| || |||||
Sbjct: 546 cggtggccttggacgtgacggtgaagttggtgtcgatcccggccagcac 594
>gb|CB661448.1|CB661448 OSJNEd04F08.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd04F08 3', mRNA sequence
Length = 835
Score = 79.8 bits (40), Expect = 8e-012
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 511 cggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccagatt 570
||||||||| |||||||||| ||||| ||||| ||||||||||||| ||| |||||||
Sbjct: 366 cggttctgcctccccatgagccccttgaggaaggggtagaggtggacgatgacccagaag 425
Query: 571 gcaaagaacagcttcccgaa 590
|| ||||| |||||||||||
Sbjct: 426 gcgaagaagagcttcccgaa 445
Score = 42.1 bits (21), Expect = 1.7
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 740 cggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcac 788
|||| ||||| || ||||| |||||||| ||||||||||| || |||||
Sbjct: 598 cggtggccttggacgtgacggtgaagttggtgtcgatcccggccagcac 646
>dbj|AK100475.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023093O20, full
insert sequence
Length = 3462
Score = 79.8 bits (40), Expect = 8e-012
Identities = 157/196 (80%)
Strand = Plus / Minus
Query: 2369 ttcttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaa 2428
||||||||||| ||||||||| |||| ||||| ||||| ||||| | || | ||||||
Sbjct: 1133 ttcttgcaaaatggaacccatctcctagcaaattctgctgtttccgcaagtgattcaaat 1074
Query: 2429 gtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatcc 2488
|| | |||||| ||||| || || || || ||||| || | || ||||| || || |||
Sbjct: 1073 gtgagcatagccgaaccatcgtctgacacgtaacacgaaatcttctcaactggatagtcc 1014
Query: 2489 acagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatcc 2548
|| ||||| |||||||| ||||| || |||| ||||||||||| || || | |||||||
Sbjct: 1013 acggcaaggatggacagaacagtattcgcagtgattagaggaggctctttcaatggatcc 954
Query: 2549 actgtactaacaaaga 2564
|||||||| |||||||
Sbjct: 953 actgtactgacaaaga 938
Score = 65.9 bits (33), Expect = 1e-007
Identities = 153/193 (79%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||| ||||||||||| ||||| || || ||||| | ||| || || ||||| |||||
Sbjct: 3050 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 2991
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||||||||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 2990 agcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggtac 2931
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattgg 609
| ||| | ||||||||| || || ||||||| ||| ||||| || || ||||| || | |
Sbjct: 2930 aagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggactcg 2871
Query: 610 tagccactgttga 622
||||| |||||||
Sbjct: 2870 tagccgctgttga 2858
Score = 54.0 bits (27), Expect = 4e-004
Identities = 114/143 (79%)
Strand = Plus / Minus
Query: 1889 tccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatcacaa 1948
||||||||||||||||| || || | || ||||||||| | || | |||||||||||
Sbjct: 1613 tccatcatgaaacacatcgcttcacgaacagctttgctattgttaacatagtgatcacag 1554
Query: 1949 tccacattaagaagataagcaccattcgtcaggacagctgatacgcgaatcaaagcattc 2008
|| | |||||||| |||| |||| ||||| || || ||||| |||| |||||| |||
Sbjct: 1553 tcaagattaagaatgtaaggggcatttgtcagaactgcggatactcgaaccaaagcgttc 1494
Query: 2009 atggcaccagccttcttgtggtg 2031
||||| || || |||||||||||
Sbjct: 1493 atggcccctgctttcttgtggtg 1471
Score = 50.1 bits (25), Expect = 0.007
Identities = 70/85 (82%)
Strand = Plus / Minus
Query: 1715 tgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgccatctagaccc 1774
||||||| |||||| || || |||||||||||||| || ||||| | |||||| || ||
Sbjct: 1787 tgcctatagaaacaacaaccagttcccacataaaccggaccttggaggccatcaagccct 1728
Query: 1775 ttcatattaatatcaaagaagacaa 1799
||||| |||| |||||||| ||||
Sbjct: 1727 ttcatgttaacgtcaaagaacacaa 1703
Score = 50.1 bits (25), Expect = 0.007
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 2630 taagtttcacggttgataggataccactttgggaactgatc 2670
|||||||| || ||||||||| ||||||| |||||||||||
Sbjct: 875 taagtttcgcgattgataggacaccacttggggaactgatc 835
Score = 44.1 bits (22), Expect = 0.42
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 1141 tcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattgga 1200
||||| ||||| |||||||| || | || |||| ||||||||||||||| || |||||
Sbjct: 2339 tcaacggaaccgagagcccaccggagaacctggtggagacgatcagaaaggttgattggc 2280
Query: 1201 gcagaacccttgaa 1214
|| || ||||||||
Sbjct: 2279 gctgatcccttgaa 2266
>dbj|AK121170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081B08, full
insert sequence
Length = 3631
Score = 79.8 bits (40), Expect = 8e-012
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 511 cggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccagatt 570
||||||||| |||||||||| ||||| ||||| ||||||||||||| ||| |||||||
Sbjct: 3133 cggttctgcctccccatgagccccttgaggaaggggtagaggtggacgatgacccagaag 3074
Query: 571 gcaaagaacagcttcccgaa 590
|| ||||| |||||||||||
Sbjct: 3073 gcgaagaagagcttcccgaa 3054
Score = 54.0 bits (27), Expect = 4e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtggtgctggaagcc 2040
|||||||| || |||||||||||||||||||||||
Sbjct: 1696 ttcatggcgccggccttcttgtggtgctggaagcc 1662
Score = 42.1 bits (21), Expect = 1.7
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 740 cggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcac 788
|||| ||||| || ||||| |||||||| ||||||||||| || |||||
Sbjct: 2901 cggtggccttggacgtgacggtgaagttggtgtcgatcccggccagcac 2853
>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0418B08
Length = 165909
Score = 79.8 bits (40), Expect = 8e-012
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 511 cggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccagatt 570
||||||||| |||||||||| ||||| ||||| ||||||||||||| ||| |||||||
Sbjct: 9933 cggttctgcctccccatgagccccttgaggaaggggtagaggtggacgatgacccagaag 9874
Query: 571 gcaaagaacagcttcccgaa 590
|| ||||| |||||||||||
Sbjct: 9873 gcgaagaagagcttcccgaa 9854
Score = 54.0 bits (27), Expect = 4e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtggtgctggaagcc 2040
|||||||| || |||||||||||||||||||||||
Sbjct: 8017 ttcatggcgccggccttcttgtggtgctggaagcc 7983
Score = 42.1 bits (21), Expect = 1.7
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 740 cggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcac 788
|||| ||||| || ||||| |||||||| ||||||||||| || |||||
Sbjct: 9701 cggtggccttggacgtgacggtgaagttggtgtcgatcccggccagcac 9653
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OJ1740_D06
Length = 187410
Score = 79.8 bits (40), Expect = 8e-012
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 511 cggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccagatt 570
||||||||| |||||||||| ||||| ||||| ||||||||||||| ||| |||||||
Sbjct: 124720 cggttctgcctccccatgagccccttgaggaaggggtagaggtggacgatgacccagaag 124661
Query: 571 gcaaagaacagcttcccgaa 590
|| ||||| |||||||||||
Sbjct: 124660 gcgaagaagagcttcccgaa 124641
Score = 54.0 bits (27), Expect = 4e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtggtgctggaagcc 2040
|||||||| || |||||||||||||||||||||||
Sbjct: 122804 ttcatggcgccggccttcttgtggtgctggaagcc 122770
Score = 42.1 bits (21), Expect = 1.7
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 740 cggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcac 788
|||| ||||| || ||||| |||||||| ||||||||||| || |||||
Sbjct: 124488 cggtggccttggacgtgacggtgaagttggtgtcgatcccggccagcac 124440
>gb|AACV01020011.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020011, whole
genome shotgun sequence
Length = 29808
Score = 79.8 bits (40), Expect = 8e-012
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 511 cggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccagatt 570
||||||||| |||||||||| ||||| ||||| ||||||||||||| ||| |||||||
Sbjct: 14608 cggttctgcctccccatgagccccttgaggaaggggtagaggtggacgatgacccagaag 14667
Query: 571 gcaaagaacagcttcccgaa 590
|| ||||| |||||||||||
Sbjct: 14668 gcgaagaagagcttcccgaa 14687
Score = 54.0 bits (27), Expect = 4e-004
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 2006 ttcatggcaccagccttcttgtggtgctggaagcc 2040
|||||||| || |||||||||||||||||||||||
Sbjct: 16524 ttcatggcgccggccttcttgtggtgctggaagcc 16558
Score = 42.1 bits (21), Expect = 1.7
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 740 cggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcac 788
|||| ||||| || ||||| |||||||| ||||||||||| || |||||
Sbjct: 14840 cggtggccttggacgtgacggtgaagttggtgtcgatcccggccagcac 14888
>ref|NT_107084.1| Oryza sativa (japonica cultivar-group)
Length = 4175757
Score = 79.8 bits (40), Expect = 8e-012
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 511 cggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccagatt 570
||||||||| |||||||||| ||||| ||||| ||||||||||||| ||| |||||||
Sbjct: 922547 cggttctgcctccccatgagccccttgaggaaggggtagaggtggacgatgacccagaag 922488
Query: 571 gcaaagaacagcttcccgaa 590
|| ||||| |||||||||||
Sbjct: 922487 gcgaagaagagcttcccgaa 922468
Score = 54.0 bits (27), Expect = 4e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtggtgctggaagcc 2040
|||||||| || |||||||||||||||||||||||
Sbjct: 920631 ttcatggcgccggccttcttgtggtgctggaagcc 920597
Score = 42.1 bits (21), Expect = 1.7
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 740 cggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcac 788
|||| ||||| || ||||| |||||||| ||||||||||| || |||||
Sbjct: 922315 cggtggccttggacgtgacggtgaagttggtgtcgatcccggccagcac 922267
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 79.8 bits (40), Expect = 8e-012
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 511 cggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccagatt 570
||||||||| |||||||||| ||||| ||||| ||||||||||||| ||| |||||||
Sbjct: 4554594 cggttctgcctccccatgagccccttgaggaaggggtagaggtggacgatgacccagaag 4554535
Query: 571 gcaaagaacagcttcccgaa 590
|| ||||| |||||||||||
Sbjct: 4554534 gcgaagaagagcttcccgaa 4554515
Score = 54.0 bits (27), Expect = 4e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtggtgctggaagcc 2040
|||||||| || |||||||||||||||||||||||
Sbjct: 4552678 ttcatggcgccggccttcttgtggtgctggaagcc 4552644
Score = 42.1 bits (21), Expect = 1.7
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 740 cggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcac 788
|||| ||||| || ||||| |||||||| ||||||||||| || |||||
Sbjct: 4554362 cggtggccttggacgtgacggtgaagttggtgtcgatcccggccagcac 4554314
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 79.8 bits (40), Expect = 8e-012
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 511 cggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccagatt 570
||||||||| |||||||||| ||||| ||||| ||||||||||||| ||| |||||||
Sbjct: 14028405 cggttctgcctccccatgagccccttgaggaaggggtagaggtggacgatgacccagaag 14028346
Query: 571 gcaaagaacagcttcccgaa 590
|| ||||| |||||||||||
Sbjct: 14028345 gcgaagaagagcttcccgaa 14028326
Score = 54.0 bits (27), Expect = 4e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtggtgctggaagcc 2040
|||||||| || |||||||||||||||||||||||
Sbjct: 14026489 ttcatggcgccggccttcttgtggtgctggaagcc 14026455
Score = 42.1 bits (21), Expect = 1.7
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 740 cggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcac 788
|||| ||||| || ||||| |||||||| ||||||||||| || |||||
Sbjct: 14028173 cggtggccttggacgtgacggtgaagttggtgtcgatcccggccagcac 14028125
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 79.8 bits (40), Expect = 8e-012
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 511 cggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccagatt 570
||||||||| |||||||||| ||||| ||||| ||||||||||||| ||| |||||||
Sbjct: 15230744 cggttctgcctccccatgagccccttgaggaaggggtagaggtggacgatgacccagaag 15230685
Query: 571 gcaaagaacagcttcccgaa 590
|| ||||| |||||||||||
Sbjct: 15230684 gcgaagaagagcttcccgaa 15230665
Score = 54.0 bits (27), Expect = 4e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtggtgctggaagcc 2040
|||||||| || |||||||||||||||||||||||
Sbjct: 15228828 ttcatggcgccggccttcttgtggtgctggaagcc 15228794
Score = 42.1 bits (21), Expect = 1.7
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 740 cggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcac 788
|||| ||||| || ||||| |||||||| ||||||||||| || |||||
Sbjct: 15230512 cggtggccttggacgtgacggtgaagttggtgtcgatcccggccagcac 15230464
>gb|AU065353.1|AU065353 AU065353 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3439_1A, mRNA sequence
Length = 400
Score = 75.8 bits (38), Expect = 1e-010
Identities = 80/94 (85%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| ||||| |||||||||| ||| || |||||||||||||||||||||||
Sbjct: 247 ccttggaatacagcgaagagatgtgaagaaacacctccaatgacccaaaactgctcattc 188
Query: 859 ctccaccaatcctcaatgccaacaccactccatc 892
|||||||| || || ||| | |||||||||||||
Sbjct: 187 ctccaccagtcatcgatggccacaccactccatc 154
>gb|CB000645.1|CB000645 S345Q_E04 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 655
Score = 75.8 bits (38), Expect = 1e-010
Identities = 80/94 (85%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| ||||| |||||||||| ||| || |||||||||||||||||||||||
Sbjct: 104 ccttggaatacagcgaagagatgtgaagaaacacctccaatgacccaaaactgctcattc 45
Query: 859 ctccaccaatcctcaatgccaacaccactccatc 892
|||||||| || || ||| | |||||||||||||
Sbjct: 44 ctccaccagtcatcgatggccacaccactccatc 11
Score = 69.9 bits (35), Expect = 7e-009
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactg 618
|||||||||| ||||||||| ||||||||||| || || |||||||||| || ||| ||
Sbjct: 341 atcacccagaatgcaaagaagagcttcccgaacagaggtccccatgattcatatccattg 282
Query: 619 ttgatagcatacgacactccagc 641
|||||||||| || ||||||||
Sbjct: 281 ttgatagcattagaaactccagc 259
>gb|CF309533.1|CF309533 ABF--03-M03.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--03-M03, mRNA sequence
Length = 635
Score = 75.8 bits (38), Expect = 1e-010
Identities = 80/94 (85%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| ||||| |||||||||| ||| || |||||||||||||||||||||||
Sbjct: 266 ccttggaatacagcgaagagatgtgaagaaacacctccaatgacccaaaactgctcattc 207
Query: 859 ctccaccaatcctcaatgccaacaccactccatc 892
|||||||| || || ||| | |||||||||||||
Sbjct: 206 ctccaccagtcatcgatggccacaccactccatc 173
Score = 69.9 bits (35), Expect = 7e-009
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactg 618
|||||||||| ||||||||| ||||||||||| || || |||||||||| || ||| ||
Sbjct: 503 atcacccagaatgcaaagaagagcttcccgaacagaggtccccatgattcatatccattg 444
Query: 619 ttgatagcatacgacactccagc 641
|||||||||| || ||||||||
Sbjct: 443 ttgatagcattagaaactccagc 421
>gb|D24964.1|D24964 RICR2854A Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R2854_1A, mRNA sequence
Length = 446
Score = 75.8 bits (38), Expect = 1e-010
Identities = 80/94 (85%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| ||||| |||||||||| ||| || |||||||||||||||||||||||
Sbjct: 247 ccttggaatacagcgaagagatgtgaagaaacacctccaatgacccaaaactgctcattc 188
Query: 859 ctccaccaatcctcaatgccaacaccactccatc 892
|||||||| || || ||| | |||||||||||||
Sbjct: 187 ctccaccagtcatcgatggccacaccactccatc 154
>dbj|AP003945.1| Oryza sativa (japonica cultivar-group) chromosome 7 clone OJ1134_A07,
*** SEQUENCING IN PROGRESS ***
Length = 146543
Score = 75.8 bits (38), Expect = 1e-010
Identities = 80/94 (85%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| ||||| |||||||||| ||| || |||||||||||||||||||||||
Sbjct: 81986 ccttggaatacagcgaagagatgtgaagaaacacctccaatgacccaaaactgctcattc 81927
Query: 859 ctccaccaatcctcaatgccaacaccactccatc 892
|||||||| || || ||| | |||||||||||||
Sbjct: 81926 ctccaccagtcatcgatggccacaccactccatc 81893
Score = 69.9 bits (35), Expect = 7e-009
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactg 618
|||||||||| ||||||||| ||||||||||| || || |||||||||| || ||| ||
Sbjct: 82223 atcacccagaatgcaaagaagagcttcccgaacagaggtccccatgattcatatccattg 82164
Query: 619 ttgatagcatacgacactccagc 641
|||||||||| || ||||||||
Sbjct: 82163 ttgatagcattagaaactccagc 82141
Score = 67.9 bits (34), Expect = 3e-008
Identities = 154/194 (79%)
Strand = Plus / Minus
Query: 2384 acccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaa 2443
||||||||| ||||||| || | ||||| || || |||||||| || | ||| || | |
Sbjct: 79766 acccatttctttgcaaattcagatgtttctgacagtgcttcaaatgtgagcattgcagca 79707
Query: 2444 ccgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggac 2503
|| |||||||||||||| || || || || ||||| ||||||||||||| ||| |||||
Sbjct: 79706 ccatcatcagaaacatagcaggaaaccttttcaactgggtaatccacagaaaggatggaa 79647
Query: 2504 aggacagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaag 2563
||||| ||||| | || | || ||||||||||| |||||| |||||||| ||||||
Sbjct: 79646 aggacggtgtttgctgtgactaagggaggttccttcgatggatcaactgtactgacaaag 79587
Query: 2564 acatcgattggagc 2577
| |||| ||||||
Sbjct: 79586 aagtcgactggagc 79573
Score = 60.0 bits (30), Expect = 7e-006
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 1793 aagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtgga 1852
||||||| ||||||||| |||||||||||||| ||| ||||||||||| || || ||
Sbjct: 80636 aagacaacgttccggttagcatatcgatcatgtcggtcaataccatcaaacctctgaggg 80577
Query: 1853 aactgaacatagca 1866
||||| ||||||||
Sbjct: 80576 aactgcacatagca 80563
Score = 44.1 bits (22), Expect = 0.42
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 1137 aatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaat 1196
||||||||| || ||||||||||| || | || |||| |||||||| ||||||||||
Sbjct: 81567 aatttcaacagatccaagagcccaacgaaggacctggtgaagacgatccgaaagattaag 81508
Query: 1197 tggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 81507 aggtgcagaacctttgaa 81490
Score = 44.1 bits (22), Expect = 0.42
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttc 2052
|||||||| |||||||||||||| || || | ||||||||||||||||
Sbjct: 80327 gcattcatagcaccagccttcttatgatgattatagcctggcctcttttc 80278
>dbj|AK059649.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-C05, full
insert sequence
Length = 1335
Score = 75.8 bits (38), Expect = 1e-010
Identities = 80/94 (85%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| ||||| |||||||||| ||| || |||||||||||||||||||||||
Sbjct: 263 ccttggaatacagcgaagagatgtgaagaaacacctccaatgacccaaaactgctcattc 204
Query: 859 ctccaccaatcctcaatgccaacaccactccatc 892
|||||||| || || ||| | |||||||||||||
Sbjct: 203 ctccaccagtcatcgatggccacaccactccatc 170
Score = 69.9 bits (35), Expect = 7e-009
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactg 618
|||||||||| ||||||||| ||||||||||| || || |||||||||| || ||| ||
Sbjct: 500 atcacccagaatgcaaagaagagcttcccgaacagaggtccccatgattcatatccattg 441
Query: 619 ttgatagcatacgacactccagc 641
|||||||||| || ||||||||
Sbjct: 440 ttgatagcattagaaactccagc 418
>dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0669H03
Length = 167878
Score = 75.8 bits (38), Expect = 1e-010
Identities = 80/94 (85%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| ||||| |||||||||| ||| || |||||||||||||||||||||||
Sbjct: 65445 ccttggaatacagcgaagagatgtgaagaaacacctccaatgacccaaaactgctcattc 65386
Query: 859 ctccaccaatcctcaatgccaacaccactccatc 892
|||||||| || || ||| | |||||||||||||
Sbjct: 65385 ctccaccagtcatcgatggccacaccactccatc 65352
Score = 69.9 bits (35), Expect = 7e-009
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactg 618
|||||||||| ||||||||| ||||||||||| || || |||||||||| || ||| ||
Sbjct: 65682 atcacccagaatgcaaagaagagcttcccgaacagaggtccccatgattcatatccattg 65623
Query: 619 ttgatagcatacgacactccagc 641
|||||||||| || ||||||||
Sbjct: 65622 ttgatagcattagaaactccagc 65600
Score = 67.9 bits (34), Expect = 3e-008
Identities = 154/194 (79%)
Strand = Plus / Minus
Query: 2384 acccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaa 2443
||||||||| ||||||| || | ||||| || || |||||||| || | ||| || | |
Sbjct: 63225 acccatttctttgcaaattcagatgtttctgacagtgcttcaaatgtgagcattgcagca 63166
Query: 2444 ccgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggac 2503
|| |||||||||||||| || || || || ||||| ||||||||||||| ||| |||||
Sbjct: 63165 ccatcatcagaaacatagcaggaaaccttttcaactgggtaatccacagaaaggatggaa 63106
Query: 2504 aggacagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaag 2563
||||| ||||| | || | || ||||||||||| |||||| |||||||| ||||||
Sbjct: 63105 aggacggtgtttgctgtgactaagggaggttccttcgatggatcaactgtactgacaaag 63046
Query: 2564 acatcgattggagc 2577
| |||| ||||||
Sbjct: 63045 aagtcgactggagc 63032
Score = 60.0 bits (30), Expect = 7e-006
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 1793 aagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtgga 1852
||||||| ||||||||| |||||||||||||| ||| ||||||||||| || || ||
Sbjct: 64095 aagacaacgttccggttagcatatcgatcatgtcggtcaataccatcaaacctctgaggg 64036
Query: 1853 aactgaacatagca 1866
||||| ||||||||
Sbjct: 64035 aactgcacatagca 64022
Score = 44.1 bits (22), Expect = 0.42
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 1137 aatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaat 1196
||||||||| || ||||||||||| || | || |||| |||||||| ||||||||||
Sbjct: 65026 aatttcaacagatccaagagcccaacgaaggacctggtgaagacgatccgaaagattaag 64967
Query: 1197 tggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 64966 aggtgcagaacctttgaa 64949
Score = 44.1 bits (22), Expect = 0.42
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttc 2052
|||||||| |||||||||||||| || || | ||||||||||||||||
Sbjct: 63786 gcattcatagcaccagccttcttatgatgattatagcctggcctcttttc 63737
>gb|AACV01015596.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015596, whole
genome shotgun sequence
Length = 13414
Score = 75.8 bits (38), Expect = 1e-010
Identities = 80/94 (85%)
Strand = Plus / Plus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| ||||| |||||||||| ||| || |||||||||||||||||||||||
Sbjct: 4896 ccttggaatacagcgaagagatgtgaagaaacacctccaatgacccaaaactgctcattc 4955
Query: 859 ctccaccaatcctcaatgccaacaccactccatc 892
|||||||| || || ||| | |||||||||||||
Sbjct: 4956 ctccaccagtcatcgatggccacaccactccatc 4989
Score = 69.9 bits (35), Expect = 7e-009
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactg 618
|||||||||| ||||||||| ||||||||||| || || |||||||||| || ||| ||
Sbjct: 4659 atcacccagaatgcaaagaagagcttcccgaacagaggtccccatgattcatatccattg 4718
Query: 619 ttgatagcatacgacactccagc 641
|||||||||| || ||||||||
Sbjct: 4719 ttgatagcattagaaactccagc 4741
Score = 67.9 bits (34), Expect = 3e-008
Identities = 154/194 (79%)
Strand = Plus / Plus
Query: 2384 acccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaa 2443
||||||||| ||||||| || | ||||| || || |||||||| || | ||| || | |
Sbjct: 7116 acccatttctttgcaaattcagatgtttctgacagtgcttcaaatgtgagcattgcagca 7175
Query: 2444 ccgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggac 2503
|| |||||||||||||| || || || || ||||| ||||||||||||| ||| |||||
Sbjct: 7176 ccatcatcagaaacatagcaggaaaccttttcaactgggtaatccacagaaaggatggaa 7235
Query: 2504 aggacagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaag 2563
||||| ||||| | || | || ||||||||||| |||||| |||||||| ||||||
Sbjct: 7236 aggacggtgtttgctgtgactaagggaggttccttcgatggatcaactgtactgacaaag 7295
Query: 2564 acatcgattggagc 2577
| |||| ||||||
Sbjct: 7296 aagtcgactggagc 7309
Score = 60.0 bits (30), Expect = 7e-006
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 1793 aagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtgga 1852
||||||| ||||||||| |||||||||||||| ||| ||||||||||| || || ||
Sbjct: 6246 aagacaacgttccggttagcatatcgatcatgtcggtcaataccatcaaacctctgaggg 6305
Query: 1853 aactgaacatagca 1866
||||| ||||||||
Sbjct: 6306 aactgcacatagca 6319
Score = 44.1 bits (22), Expect = 0.42
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttc 2052
|||||||| |||||||||||||| || || | ||||||||||||||||
Sbjct: 6555 gcattcatagcaccagccttcttatgatgattatagcctggcctcttttc 6604
Score = 44.1 bits (22), Expect = 0.42
Identities = 64/78 (82%)
Strand = Plus / Plus
Query: 1137 aatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaat 1196
||||||||| || ||||||||||| || | || |||| |||||||| ||||||||||
Sbjct: 5315 aatttcaacagatccaagagcccaacgaaggacctggtgaagacgatccgaaagattaag 5374
Query: 1197 tggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 5375 aggtgcagaacctttgaa 5392
>gb|CH401221.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000058 genomic
scaffold, whole genome shotgun sequence
Length = 3500188
Score = 75.8 bits (38), Expect = 1e-010
Identities = 80/94 (85%)
Strand = Plus / Minus
Query: 799 ccttggaacacagcaaagagatgtgcagaggtgccaccaatgacccaaaactgctcattt 858
|||||||| ||||| |||||||||| ||| || |||||||||||||||||||||||
Sbjct: 2393349 ccttggaatacagcgaagagatgtgaagaaacacctccaatgacccaaaactgctcattc 2393290
Query: 859 ctccaccaatcctcaatgccaacaccactccatc 892
|||||||| || || ||| | |||||||||||||
Sbjct: 2393289 ctccaccagtcatcgatggccacaccactccatc 2393256
Score = 69.9 bits (35), Expect = 7e-009
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactg 618
|||||||||| ||||||||| ||||||||||| || || |||||||||| || ||| ||
Sbjct: 2393586 atcacccagaatgcaaagaagagcttcccgaacagaggtccccatgattcatatccattg 2393527
Query: 619 ttgatagcatacgacactccagc 641
|||||||||| || ||||||||
Sbjct: 2393526 ttgatagcattagaaactccagc 2393504
Score = 67.9 bits (34), Expect = 3e-008
Identities = 154/194 (79%)
Strand = Plus / Minus
Query: 2384 acccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacatagctgaa 2443
||||||||| ||||||| || | ||||| || || |||||||| || | ||| || | |
Sbjct: 2391129 acccatttctttgcaaattcagatgtttctgacagtgcttcaaatgtgagcattgcagca 2391070
Query: 2444 ccgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggac 2503
|| |||||||||||||| || || || || ||||| ||||||||||||| ||| |||||
Sbjct: 2391069 ccatcatcagaaacatagcaggaaaccttttcaactgggtaatccacagaaaggatggaa 2391010
Query: 2504 aggacagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaag 2563
||||| ||||| | || | || ||||||||||| |||||| |||||||| ||||||
Sbjct: 2391009 aggacggtgtttgctgtgactaagggaggttccttcgatggatcaactgtactgacaaag 2390950
Query: 2564 acatcgattggagc 2577
| |||| ||||||
Sbjct: 2390949 aagtcgactggagc 2390936
Score = 60.0 bits (30), Expect = 7e-006
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 1793 aagacaatgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtgga 1852
||||||| ||||||||| |||||||||||||| ||| ||||||||||| || || ||
Sbjct: 2391999 aagacaacgttccggttagcatatcgatcatgtcggtcaataccatcaaacctctgaggg 2391940
Query: 1853 aactgaacatagca 1866
||||| ||||||||
Sbjct: 2391939 aactgcacatagca 2391926
Score = 44.1 bits (22), Expect = 0.42
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 1137 aatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaat 1196
||||||||| || ||||||||||| || | || |||| |||||||| ||||||||||
Sbjct: 2392930 aatttcaacagatccaagagcccaacgaaggacctggtgaagacgatccgaaagattaag 2392871
Query: 1197 tggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 2392870 aggtgcagaacctttgaa 2392853
Score = 44.1 bits (22), Expect = 0.42
Identities = 43/50 (86%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgtggtgctggaagcctggcctcttttc 2052
|||||||| |||||||||||||| || || | ||||||||||||||||
Sbjct: 2391690 gcattcatagcaccagccttcttatgatgattatagcctggcctcttttc 2391641
>gb|D46824.1|D46824 RICS11739A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 402
Score = 73.8 bits (37), Expect = 5e-010
Identities = 139/173 (80%)
Strand = Plus / Minus
Query: 2423 tcaaaagtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacaggg 2482
|||||||||| ||| || | ||| || ||||| ||||| || || || ||||| || |||
Sbjct: 181 tcaaaagtcagcattgcagcaccatcgtcagatacatagcaagagaccttgtccactggg 122
Query: 2483 taatccacagcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagt 2542
||||| ||||||||||||||||| || || ||| |||||| |||||||||||||| |
Sbjct: 121 taatcaacagcaagaatggacagcacggtattggcagtaacaagaggaggttccttcatg 62
Query: 2543 ggatccactgtactaacaaagacatcgattggagccaactgggatggctcacc 2595
|| || |||||||| ||||| | || | | ||||||||| |||||||||||
Sbjct: 61 gggtcgactgtactgacaaaaatgtcaacagcagccaactgagatggctcacc 9
>gb|D23732.1|D23732 RICR0021A Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R0021_1A, mRNA sequence
Length = 450
Score = 73.8 bits (37), Expect = 5e-010
Identities = 76/89 (85%)
Strand = Plus / Minus
Query: 1754 ccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggtttgca 1813
|||||||| ||||| ||||| ||||| || ||||| || ||||||| ||||||||| |||
Sbjct: 92 ccttgaattccatccagacctttcatgttgatatcgaaaaagacaacgttccggttagca 33
Query: 1814 tatcgatcatgcaagtctataccatcaaa 1842
||||||||||| ||| |||||||||||
Sbjct: 32 tatcgatcatgtcggtcaataccatcaaa 4
>gb|D23761.1|D23761 RICR0084A Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R0084_1A, mRNA sequence
Length = 461
Score = 73.8 bits (37), Expect = 5e-010
Identities = 76/89 (85%)
Strand = Plus / Minus
Query: 1754 ccttgaatgccatctagacccttcatattaatatcaaagaagacaatgttccggtttgca 1813
|||||||| ||||| ||||| ||||| || ||||| || ||||||| ||||||||| |||
Sbjct: 91 ccttgaattccatccagacctttcatgttgatatcgaaaaagacaacgttccggttagca 32
Query: 1814 tatcgatcatgcaagtctataccatcaaa 1842
||||||||||| ||| |||||||||||
Sbjct: 31 tatcgatcatgtcggtcaataccatcaaa 3
>gb|AQ913892.1|AQ913892 nbeb0045L07r CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0045L07r, DNA sequence
Length = 455
Score = 71.9 bits (36), Expect = 2e-009
Identities = 96/116 (82%)
Strand = Plus / Plus
Query: 2423 tcaaaagtcaacatagctgaaccgtcatcagaaacataacatgatactttgtcaacaggg 2482
|||||||||| ||| || | ||| || ||||| ||||| || || || ||||| || |||
Sbjct: 334 tcaaaagtcagcattgcagcaccatcgtcagatacatagcaagagaccttgtccactggg 393
Query: 2483 taatccacagcaagaatggacaggacagtgttgccagtaattagaggaggttcctt 2538
||||| ||||||||||||||||| || || ||| |||||| ||||||||||||||
Sbjct: 394 taatcaacagcaagaatggacagcacggtattggcagtaacaagaggaggttcctt 449
>gb|AU222725.1|AU222725 AU222725 Rice shoot Oryza sativa (japonica cultivar-group) cDNA clone
S0617, mRNA sequence
Length = 461
Score = 71.9 bits (36), Expect = 2e-009
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
|||||||| |||||||||| ||||||||| ||||| || || || ||||| || ||||||
Sbjct: 205 tgcatcttaaaaccagttagaatatcttctgtaactgatccgtagatccagccaatctct 146
Query: 1321 ttcccccattctgttttatc 1340
|||||||| ||||| |||||
Sbjct: 145 ttcccccagtctgtcttatc 126
Score = 58.0 bits (29), Expect = 3e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1138 atttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaatt 1197
|||||||| || ||||||||||| || | ||||||| ||||||||||||||||| | |
Sbjct: 328 atttcaacagacccaagagcccaccgaagaacttggtgaagacgatcagaaagattgagt 269
Query: 1198 ggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 268 ggtgcagaacctttgaa 252
>gb|CB640476.1|CB640476 OSJNEa15A06.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa15A06 5', mRNA sequence
Length = 528
Score = 71.9 bits (36), Expect = 2e-009
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
|||||||| |||||||||| ||||||||| ||||| || || || ||||| || ||||||
Sbjct: 458 tgcatcttaaaaccagttagaatatcttctgtaactgatccgtagatccagccaatctct 399
Query: 1321 ttcccccattctgttttatc 1340
|||||||| ||||| |||||
Sbjct: 398 ttcccccagtctgtcttatc 379
>gb|CB645001.1|CB645001 OSJNEb06H07.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb06H07 5', mRNA sequence
Length = 859
Score = 71.9 bits (36), Expect = 2e-009
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
|||||||| |||||||||| ||||||||| ||||| || || || ||||| || ||||||
Sbjct: 466 tgcatcttaaaaccagttagaatatcttctgtaactgatccgtagatccagccaatctct 407
Query: 1321 ttcccccattctgttttatc 1340
|||||||| ||||| |||||
Sbjct: 406 ttcccccagtctgtcttatc 387
Score = 58.0 bits (29), Expect = 3e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1138 atttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaatt 1197
|||||||| || ||||||||||| || | ||||||| ||||||||||||||||| | |
Sbjct: 589 atttcaacagacccaagagcccaccgaagaacttggtgaagacgatcagaaagattgagt 530
Query: 1198 ggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 529 ggtgcagaacctttgaa 513
Score = 44.1 bits (22), Expect = 0.42
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 871 tcaatgccaacaccactccatc 892
||||||||||||||||||||||
Sbjct: 856 tcaatgccaacaccactccatc 835
>dbj|AK120236.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043M21, full
insert sequence
Length = 2931
Score = 71.9 bits (36), Expect = 2e-009
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 1261 tgcatcttgaaaccagttaaaatatcttcagtaacagagccatatatccatccgatctct 1320
|||||||| |||||||||| ||||||||| ||||| || || || ||||| || ||||||
Sbjct: 2661 tgcatcttaaaaccagttagaatatcttctgtaactgatccgtagatccagccaatctct 2602
Query: 1321 ttcccccattctgttttatc 1340
|||||||| ||||| |||||
Sbjct: 2601 ttcccccagtctgtcttatc 2582
Score = 58.0 bits (29), Expect = 3e-005
Identities = 65/77 (84%)
Strand = Plus / Minus
Query: 1138 atttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaatt 1197
|||||||| || ||||||||||| || | ||||||| ||||||||||||||||| | |
Sbjct: 2784 atttcaacagacccaagagcccaccgaagaacttggtgaagacgatcagaaagattgagt 2725
Query: 1198 ggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 2724 ggtgcagaacctttgaa 2708
Score = 54.0 bits (27), Expect = 4e-004
Identities = 159/203 (78%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||||||| ||||||| || | ||||| |||| |||||||| |||
Sbjct: 1530 ttgcagaaaggaacccatttctttgcaaattcagatgtttcggataatgcttcaaatgtc 1471
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | ||| |||||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 1470 agcattgcagcaccatcatcagagacatagcatgaaaccttatcaactggataatctacc 1411
Query: 2492 gcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatccact 2551
|| || || || || |||||||| | || | | |||||||||||| | ||||| ||
Sbjct: 1410 gcgaggatagatagaacagtgtttgctgtgaccaaaggaggttccttcaagggatcaaca 1351
Query: 2552 gtactaacaaagacatcgattgg 2574
||||| ||||||| |||||||||
Sbjct: 1350 gtactgacaaagaaatcgattgg 1328
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtg 2028
|||||||||||||||||||||||
Sbjct: 1896 ttcatggcaccagccttcttgtg 1874
>gb|AU068488.1|AU068488 AU068488 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C30355_4A, mRNA sequence
Length = 270
Score = 69.9 bits (35), Expect = 7e-009
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactg 618
|||||||||| ||||||||| ||||||||||| || || |||||||||| || ||| ||
Sbjct: 183 atcacccagaatgcaaagaagagcttcccgaacagaggtccccatgattcatatccattg 124
Query: 619 ttgatagcatacgacactccagc 641
|||||||||| || ||||||||
Sbjct: 123 ttgatagcattagaaactccagc 101
>gb|CF323718.1|CF323718 HDN--04-J12.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--04-J12, mRNA sequence
Length = 531
Score = 69.9 bits (35), Expect = 7e-009
Identities = 71/83 (85%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgattggtagccactg 618
|||||||||| ||||||||| ||||||||||| || || |||||||||| || ||| ||
Sbjct: 218 atcacccagaatgcaaagaagagcttcccgaacagaggtccccatgattcatatccattg 159
Query: 619 ttgatagcatacgacactccagc 641
|||||||||| || ||||||||
Sbjct: 158 ttgatagcattagaaactccagc 136
>gb|CV721269.1|CV721269 YBH--03-H23.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--03-H23, mRNA sequence
Length = 432
Score = 67.9 bits (34), Expect = 3e-008
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 511 cggttctgcttccccatgagacccttcaggaaagggtagaggtggaggatcacccaga 568
||||||||| |||||||||| ||||| ||||| ||||||||||||| ||| |||||||
Sbjct: 225 cggttctgcctccccatgagccccttgaggaaggggtagaggtggacgatgacccaga 168
>gb|AQ856523.1|AQ856523 nbeb0003G20f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0003G20f, DNA sequence
Length = 934
Score = 65.9 bits (33), Expect = 1e-007
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 2002 agcattcatggcaccagccttcttgtggtgctg 2034
|||||||||||||||||||||||||||||||||
Sbjct: 389 agcattcatggcaccagccttcttgtggtgctg 357
Score = 40.1 bits (20), Expect = 6.5
Identities = 53/64 (82%)
Strand = Plus / Minus
Query: 1800 tgttccggtttgcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaa 1859
|||||| ||| ||||||||||||| | || |||||||| || ||||||| |||||||
Sbjct: 682 tgttcctgttggcatatcgatcattcttatcaataccatcgaacttttgtgggaactgaa 623
Query: 1860 cata 1863
||||
Sbjct: 622 cata 619
>gb|CB647914.1|CB647914 OSJNEb11A21.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb11A21 3', mRNA sequence
Length = 811
Score = 65.9 bits (33), Expect = 1e-007
Identities = 153/193 (79%)
Strand = Plus / Plus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||| ||||||||||| ||||| || || ||||| | ||| || || ||||| |||||
Sbjct: 454 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 513
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||||||||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 514 agcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggtac 573
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattgg 609
| ||| | ||||||||| || || ||||||| ||| ||||| || || ||||| || | |
Sbjct: 574 aagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggactcg 633
Query: 610 tagccactgttga 622
||||| |||||||
Sbjct: 634 tagccgctgttga 646
>gb|CB650381.1|CB650381 OSJNEb14M17.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb14M17 3', mRNA sequence
Length = 807
Score = 65.9 bits (33), Expect = 1e-007
Identities = 153/193 (79%)
Strand = Plus / Plus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||| ||||||||||| ||||| || || ||||| | ||| || || ||||| |||||
Sbjct: 438 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 497
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||||||||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 498 agcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggtac 557
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattgg 609
| ||| | ||||||||| || || ||||||| ||| ||||| || || ||||| || | |
Sbjct: 558 aagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggactcg 617
Query: 610 tagccactgttga 622
||||| |||||||
Sbjct: 618 tagccgctgttga 630
>gb|CF277079.1|CF277079 14ETL--02-H16.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--02-H16, mRNA sequence
Length = 488
Score = 65.9 bits (33), Expect = 1e-007
Identities = 70/81 (86%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 511 cggttctgcttccccatgagacccttcaggaaagggt-agaggtggaggatcacccagat 569
||||||||| |||||||||| ||||| ||||| |||| ||||||||| ||| |||||||
Sbjct: 332 cggttctgcctccccatgagccccttgaggaaggggtnagaggtggacgatgacccagaa 391
Query: 570 tgcaaagaacagcttcccgaa 590
|| ||||| |||||||||||
Sbjct: 392 ggcgaagaagagcttcccgaa 412
>dbj|AK100374.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084J22, full
insert sequence
Length = 2024
Score = 65.9 bits (33), Expect = 1e-007
Identities = 153/193 (79%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||| ||||||||||| ||||| || || ||||| | ||| || || ||||| |||||
Sbjct: 1616 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 1557
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||||||||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 1556 agcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggtac 1497
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattgg 609
| ||| | ||||||||| || || ||||||| ||| ||||| || || ||||| || | |
Sbjct: 1496 aagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggactcg 1437
Query: 610 tagccactgttga 622
||||| |||||||
Sbjct: 1436 tagccgctgttga 1424
Score = 54.0 bits (27), Expect = 4e-004
Identities = 114/143 (79%)
Strand = Plus / Minus
Query: 1889 tccatcatgaaacacatagcctctctaagagctttgctgctattgaagtagtgatcacaa 1948
||||||||||||||||| || || | || ||||||||| | || | |||||||||||
Sbjct: 179 tccatcatgaaacacatcgcttcacgaacagctttgctattgttaacatagtgatcacag 120
Query: 1949 tccacattaagaagataagcaccattcgtcaggacagctgatacgcgaatcaaagcattc 2008
|| | |||||||| |||| |||| ||||| || || ||||| |||| |||||| |||
Sbjct: 119 tcaagattaagaatgtaaggggcatttgtcagaactgcggatactcgaaccaaagcgttc 60
Query: 2009 atggcaccagccttcttgtggtg 2031
||||| || || |||||||||||
Sbjct: 59 atggcccctgctttcttgtggtg 37
Score = 50.1 bits (25), Expect = 0.007
Identities = 70/85 (82%)
Strand = Plus / Minus
Query: 1715 tgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgccatctagaccc 1774
||||||| |||||| || || |||||||||||||| || ||||| | |||||| || ||
Sbjct: 353 tgcctatagaaacaacaaccagttcccacataaaccggaccttggaggccatcaagccct 294
Query: 1775 ttcatattaatatcaaagaagacaa 1799
||||| |||| |||||||| ||||
Sbjct: 293 ttcatgttaacgtcaaagaacacaa 269
Score = 44.1 bits (22), Expect = 0.42
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 1141 tcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattgga 1200
||||| ||||| |||||||| || | || |||| ||||||||||||||| || |||||
Sbjct: 905 tcaacggaaccgagagcccaccggagaacctggtggagacgatcagaaaggttgattggc 846
Query: 1201 gcagaacccttgaa 1214
|| || ||||||||
Sbjct: 845 gctgatcccttgaa 832
>dbj|AK105078.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-G07, full
insert sequence
Length = 1504
Score = 65.9 bits (33), Expect = 1e-007
Identities = 153/193 (79%)
Strand = Plus / Minus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||| ||||||||||| ||||| || || ||||| | ||| || || ||||| |||||
Sbjct: 1162 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccag 1103
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||||||||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 1102 agcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggtac 1043
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccatgattgg 609
| ||| | ||||||||| || || ||||||| ||| ||||| || || ||||| || | |
Sbjct: 1042 aagtgcatgatcacccacatggcgaagaacaccttgccgaagagcgggccccaggactcg 983
Query: 610 tagccactgttga 622
||||| |||||||
Sbjct: 982 tagccgctgttga 970
Score = 44.1 bits (22), Expect = 0.42
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 1141 tcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattgga 1200
||||| ||||| |||||||| || | || |||| ||||||||||||||| || |||||
Sbjct: 451 tcaacggaaccgagagcccaccggagaacctggtggagacgatcagaaaggttgattggc 392
Query: 1201 gcagaacccttgaa 1214
|| || ||||||||
Sbjct: 391 gctgatcccttgaa 378
>gb|D41261.1|D41261 RICS3630A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 461
Score = 61.9 bits (31), Expect = 2e-006
Identities = 106/131 (80%)
Strand = Plus / Minus
Query: 2447 tcatcagaaacataacatgatactttgtcaacagggtaatccacagcaagaatggacagg 2506
|||||||||||||| || || || || ||||| ||||||||||||| ||| ||||| |||
Sbjct: 416 tcatcagaaacatagcaggaaaccttttcaactgggtaatccacagaaaggatggaaagg 357
Query: 2507 acagtgttgccagtaattagaggaggttccttaagtggatccactgtactaacaaagaca 2566
|| ||||| | || | || ||||||||||| |||||| |||||||| |||||||
Sbjct: 356 acggtgtttgctgtgactaagggaggttccttcgatggatcaactgtactgacaaagaag 297
Query: 2567 tcgattggagc 2577
|||| ||||||
Sbjct: 296 tcgactggagc 286
>gb|D48053.1|D48053 RICS13983A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 467
Score = 60.0 bits (30), Expect = 7e-006
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
||||| ||||| || |||| ||||||||| | ||||||||| ||||||||||| || ||
Sbjct: 172 aggaatgggtaaagatggacgatcacccaaaatgcaaagaagagcttcccgaagaggggt 113
Query: 598 ccccatgatt 607
||||||||||
Sbjct: 112 ccccatgatt 103
>gb|CB639145.1|CB639145 OSJNEa08I15.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa08I15 3', mRNA sequence
Length = 534
Score = 60.0 bits (30), Expect = 7e-006
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 511 cggttctgcttccccatgagacccttcaggaaagggtagaggtgga 556
||||||||| |||||||||| ||||| ||||| |||||||||||||
Sbjct: 287 cggttctgcctccccatgagccccttgaggaaggggtagaggtgga 332
>gb|CF311260.1|CF311260 ABF--06-G16.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--06-G16, mRNA sequence
Length = 414
Score = 60.0 bits (30), Expect = 7e-006
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
||||| ||||| || |||| ||||||||| | ||||||||| ||||||||||| || ||
Sbjct: 275 aggaatgggtaaagatggacgatcacccaaaatgcaaagaagagcttcccgaagaggggt 216
Query: 598 ccccatgatt 607
||||||||||
Sbjct: 215 ccccatgatt 206
>gb|D48612.2|D48612 RICS14935A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 270
Score = 60.0 bits (30), Expect = 7e-006
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 538 aggaaagggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtgga 597
||||| ||||| || |||| ||||||||| | ||||||||| ||||||||||| || ||
Sbjct: 175 aggaatgggtaaagatggacgatcacccaaaatgcaaagaagagcttcccgaagaggggt 116
Query: 598 ccccatgatt 607
||||||||||
Sbjct: 115 ccccatgatt 106
>gb|CB648833.1|CB648833 OSJNEb12G21.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb12G21 3', mRNA sequence
Length = 782
Score = 58.0 bits (29), Expect = 3e-005
Identities = 128/161 (79%)
Strand = Plus / Plus
Query: 430 atgaaggggtcgatcttcacccacagcagcgagaatatggaagcaagaaggacggaccaa 489
||||| ||||||||||| ||||| || || ||||| | ||| || || ||||| |||||
Sbjct: 391 atgaacgggtcgatcttgacccagaggagggagaagacggaggcgagcaggacagaccat 450
Query: 490 acaatgacgatggtcggtgtgcggttctgcttccccatgagacccttcaggaaagggtag 549
| | ||||||||| || || |||||||| |||||||||||||| ||||| |||||
Sbjct: 451 agcacgacgatggtgggcgtccggttctggcgacccatgagacccttgaggaaggggtac 510
Query: 550 aggtggaggatcacccagattgcaaagaacagcttcccgaa 590
| ||| | ||||||||| || || ||||||| ||| |||||
Sbjct: 511 aagtgcatgatcacccacatggcgaagaacaccttgccgaa 551
>gb|C26272.1|C26272 C26272 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C12013_1A, mRNA sequence
Length = 432
Score = 56.0 bits (28), Expect = 1e-004
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 2645 ataggataccactttgggaactgatctagaagccaagaca 2684
|||||| ||||||||||||||||||| |||| ||||||||
Sbjct: 131 ataggaaaccactttgggaactgatcaagaatccaagaca 92
Score = 40.1 bits (20), Expect = 6.5
Identities = 83/104 (79%)
Strand = Plus / Minus
Query: 2408 gtttcagatagagcttcaaaagtcaacatagctgaaccgtcatcagaaacataacatgat 2467
|||||||| || |||||||| |||| ||| || | || |||||||||||||| || ||
Sbjct: 368 gtttcagacagtgcttcaaatgtcagcatggcagccccatcatcagaaacatagcaagag 309
Query: 2468 actttgtcaacagggtaatccacagcaagaatggacaggacagt 2511
|| ||||| || || ||||| || ||||| || ||||| |||||
Sbjct: 308 accttgtcgaccggataatctaccgcaaggatagacagaacagt 265
>gb|AQ049866.1|AQ049866 nbxb0002cG08f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0002N15f, DNA sequence
Length = 680
Score = 54.0 bits (27), Expect = 4e-004
Identities = 159/203 (78%)
Strand = Plus / Plus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||||||| ||||||| || | ||||| |||| |||||||| |||
Sbjct: 173 ttgcagaaaggaacccatttctttgcaaattcagatgtttcggataatgcttcaaatgtc 232
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | ||| |||||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 233 agcattgcagcaccatcatcagagacatagcatgaaaccttatcaactggataatctacc 292
Query: 2492 gcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatccact 2551
|| || || || || |||||||| | || | | |||||||||||| | ||||| ||
Sbjct: 293 gcgaggatagatagaacagtgtttgctgtgaccaaaggaggttccttcaagggatcaaca 352
Query: 2552 gtactaacaaagacatcgattgg 2574
||||| ||||||| |||||||||
Sbjct: 353 gtactgacaaagaaatcgattgg 375
>gb|AQ916163.1|AQ916163 nbeb0061B14r CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0061B14r, DNA sequence
Length = 524
Score = 54.0 bits (27), Expect = 4e-004
Identities = 108/135 (80%)
Strand = Plus / Plus
Query: 2377 aaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtcaacat 2436
|||||||||||| ||| ||||||| || | |||||||| || |||||||| |||| |||
Sbjct: 282 aaagggaacccacttctttgcaaattcagatgtttcagacagtgcttcaaatgtcagcat 341
Query: 2437 agctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccacagcaag 2496
|| | || |||||||||||||| || || || ||||| || || ||||| || |||||
Sbjct: 342 ggcagccccatcatcagaaacatagcaagagaccttgtcgaccggataatctaccgcaag 401
Query: 2497 aatggacaggacagt 2511
|| ||||| |||||
Sbjct: 402 gatagacagaacagt 416
>gb|D24375.1|D24375 RICR1807A Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R1807_1A, mRNA sequence
Length = 396
Score = 54.0 bits (27), Expect = 4e-004
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 1736 gttcccacataaacaggtccttgaatgccatctagaccc 1774
|||||||||||||| |||||||| |||||||| ||||||
Sbjct: 45 gttcccacataaactggtccttggatgccatcaagaccc 7
Score = 48.1 bits (24), Expect = 0.027
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 1462 agactggccaaagcgtttctccaagctcttctgagacataagcagtga 1509
|||||||||||| | |||||||||||| | ||||||||||| |||||
Sbjct: 325 agactggccaaatctcttctccaagctcatttgagacataagaagtga 278
>gb|AU065472.1|AU065472 AU065472 Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R4061_1A, mRNA sequence
Length = 359
Score = 54.0 bits (27), Expect = 4e-004
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 1736 gttcccacataaacaggtccttgaatgccatctagaccc 1774
|||||||||||||| |||||||| |||||||| ||||||
Sbjct: 45 gttcccacataaactggtccttggatgccatcaagaccc 7
>gb|CA998979.1|CA998979 S345S_F09 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 679
Score = 54.0 bits (27), Expect = 4e-004
Identities = 69/83 (83%)
Strand = Plus / Minus
Query: 746 cctttgatgtgaccgtgaagtttgtgtcgatccctgctagcacttttaagagaccttgga 805
|||||||||| || |||||| |||| ||||| || |||| || || | || |||||||
Sbjct: 86 cctttgatgtcacagtgaagcttgtatcgataccagctatgaccttgagaagtccttgga 27
Query: 806 acacagcaaagagatgtgcagag 828
|||||||||||||||||| ||||
Sbjct: 26 acacagcaaagagatgtgaagag 4
Score = 50.1 bits (25), Expect = 0.007
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgatt 607
|||||||| | |||||||||||||||||| || || || ||||||||||
Sbjct: 270 atcacccaaaatgcaaagaacagcttcccaaagagcggcccccatgatt 222
>gb|CB637086.1|CB637086 OSJNEa03E07.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa03E07 5', mRNA sequence
Length = 490
Score = 54.0 bits (27), Expect = 4e-004
Identities = 159/203 (78%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||||||| ||||||| || | ||||| |||| |||||||| |||
Sbjct: 254 ttgcagaaaggaacccatttctttgcaaattcagatgtttcggataatgcttcaaatgtc 195
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | ||| |||||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 194 agcattgcagcaccatcatcagagacatagcatgaaaccttatcaactggataatctacc 135
Query: 2492 gcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatccact 2551
|| || || || || |||||||| | || | | |||||||||||| | ||||| ||
Sbjct: 134 gcgaggatagatagaacagtgtttgctgtgaccaaaggaggttccttcaagggatcaaca 75
Query: 2552 gtactaacaaagacatcgattgg 2574
||||| ||||||| |||||||||
Sbjct: 74 gtactgacaaagaaatcgattgg 52
>gb|CB639904.1|CB639904 OSJNEa12H04.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa12H04 5', mRNA sequence
Length = 502
Score = 54.0 bits (27), Expect = 4e-004
Identities = 159/203 (78%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||||||| ||||||| || | ||||| |||| |||||||| |||
Sbjct: 244 ttgcagaaaggaacccatttctttgcaaattcagatgtttcggataatgcttcaaatgtc 185
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | ||| |||||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 184 agcattgcagcaccatcatcagagacatagcatgaaaccttatcaactggataatctacc 125
Query: 2492 gcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatccact 2551
|| || || || || |||||||| | || | | |||||||||||| | ||||| ||
Sbjct: 124 gcgaggatagatagaacagtgtttgctgtgaccaaaggaggttccttcaagggatcaaca 65
Query: 2552 gtactaacaaagacatcgattgg 2574
||||| ||||||| |||||||||
Sbjct: 64 gtactgacaaagaaatcgattgg 42
>gb|CB640058.1|CB640058 OSJNEa13B21.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa13B21 5', mRNA sequence
Length = 577
Score = 54.0 bits (27), Expect = 4e-004
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtggtgctggaagcc 2040
|||||||| || |||||||||||||||||||||||
Sbjct: 212 ttcatggcgccggccttcttgtggtgctggaagcc 178
>gb|CB640086.1|CB640086 OSJNEa13D08.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa13D08 5', mRNA sequence
Length = 488
Score = 54.0 bits (27), Expect = 4e-004
Identities = 159/203 (78%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||||||| ||||||| || | ||||| |||| |||||||| |||
Sbjct: 254 ttgcagaaaggaacccatttctttgcaaattcagatgtttcggataatgcttcaaatgtc 195
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | ||| |||||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 194 agcattgcagcaccatcatcagagacatagcatgaaaccttatcaactggataatctacc 135
Query: 2492 gcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatccact 2551
|| || || || || |||||||| | || | | |||||||||||| | ||||| ||
Sbjct: 134 gcgaggatagatagaacagtgtttgctgtgaccaaaggaggttccttcaagggatcaaca 75
Query: 2552 gtactaacaaagacatcgattgg 2574
||||| ||||||| |||||||||
Sbjct: 74 gtactgacaaagaaatcgattgg 52
>gb|CB676377.1|CB676377 OSJNEe12J14.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe12J14 5', mRNA sequence
Length = 765
Score = 54.0 bits (27), Expect = 4e-004
Identities = 159/203 (78%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||||||| ||||||| || | ||||| |||| |||||||| |||
Sbjct: 756 ttgcagaaaggaacccatttctttgcaaattcagatgtttcggataatgcttcaaatgtc 697
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | ||| |||||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 696 agcattgcagcaccatcatcagagacatagcatgaaaccttatcaactggataatctacc 637
Query: 2492 gcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatccact 2551
|| || || || || |||||||| | || | | |||||||||||| | ||||| ||
Sbjct: 636 gcgaggatagatagaacagtgtttgctgtgaccaaaggaggttccttcaagggatcaaca 577
Query: 2552 gtactaacaaagacatcgattgg 2574
||||| ||||||| |||||||||
Sbjct: 576 gtactgacaaagaaatcgattgg 554
>gb|CB677472.1|CB677472 OSJNEe14G24.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe14G24 5', mRNA sequence
Length = 795
Score = 54.0 bits (27), Expect = 4e-004
Identities = 159/203 (78%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||||||| ||||||| || | ||||| |||| |||||||| |||
Sbjct: 680 ttgcagaaaggaacccatttctttgcaaattcagatgtttcggataatgcttcaaatgtc 621
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | ||| |||||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 620 agcattgcagcaccatcatcagagacatagcatgaaaccttatcaactggataatctacc 561
Query: 2492 gcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatccact 2551
|| || || || || |||||||| | || | | |||||||||||| | ||||| ||
Sbjct: 560 gcgaggatagatagaacagtgtttgctgtgaccaaaggaggttccttcaagggatcaaca 501
Query: 2552 gtactaacaaagacatcgattgg 2574
||||| ||||||| |||||||||
Sbjct: 500 gtactgacaaagaaatcgattgg 478
>gb|CF307212.1|CF307212 HDA1--06-B04.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--06-B04, mRNA sequence
Length = 553
Score = 54.0 bits (27), Expect = 4e-004
Identities = 159/203 (78%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||||||| ||||||| || | ||||| |||| |||||||| |||
Sbjct: 366 ttgcagaaaggaacccatttctttgcaaattcagatgtttcggataatgcttcaaatgtc 307
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatccaca 2491
| ||| || | ||| |||||||| ||||| ||||| || || ||||| || ||||| ||
Sbjct: 306 agcattgcagcaccatcatcagagacatagcatgaaaccttatcaactggataatctacc 247
Query: 2492 gcaagaatggacaggacagtgttgccagtaattagaggaggttccttaagtggatccact 2551
|| || || || || |||||||| | || | | |||||||||||| | ||||| ||
Sbjct: 246 gcgaggatagatagaacagtgtttgctgtgaccaaaggaggttccttcaagggatcaaca 187
Query: 2552 gtactaacaaagacatcgattgg 2574
||||| ||||||| |||||||||
Sbjct: 186 gtactgacaaagaaatcgattgg 164
>gb|CB641023.1|CB641023 OSJNEa17H21.f OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa17H21 5', mRNA sequence
Length = 582
Score = 50.1 bits (25), Expect = 0.007
Identities = 70/85 (82%)
Strand = Plus / Minus
Query: 1715 tgcctattgaaacagcatcctgttcccacataaacaggtccttgaatgccatctagaccc 1774
||||||| |||||| || || |||||||||||||| || ||||| | |||||| || ||
Sbjct: 272 tgcctatagaaacaacaaccagttcccacataaaccggaccttggaggccatcaagccct 213
Query: 1775 ttcatattaatatcaaagaagacaa 1799
||||| |||| |||||||| ||||
Sbjct: 212 ttcatgttaacgtcaaagaacacaa 188
>gb|CF326709.1|CF326709 JMT1--06-N01.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--06-N01, mRNA sequence
Length = 505
Score = 50.1 bits (25), Expect = 0.007
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 559 atcacccagattgcaaagaacagcttcccgaatagtggaccccatgatt 607
|||||||| | |||||||||||||||||| || || || ||||||||||
Sbjct: 271 atcacccaaaatgcaaagaacagcttcccaaagagcggcccccatgatt 223
>gb|D47622.1|D47622 RICS13225A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 461
Score = 48.1 bits (24), Expect = 0.027
Identities = 93/116 (80%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||||||| ||||||| || | ||||| |||| |||||||| |||
Sbjct: 147 ttgcagaaaggaacccatttctttgcaaattcagatgtttcggataatgcttcaaatgtc 88
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
| ||| || | ||| |||||||| ||||| ||||| || || ||||| || |||||
Sbjct: 87 agcattgcagcaccatcatcagagacatagcatgaaaccttatcaactggataatc 32
>gb|CB671068.1|CB671068 OSJNEe04H10.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04H10 5', mRNA sequence
Length = 792
Score = 48.1 bits (24), Expect = 0.027
Identities = 93/116 (80%)
Strand = Plus / Minus
Query: 2372 ttgcaaaagggaacccatttccttgcaaactctgcggtttcagatagagcttcaaaagtc 2431
||||| || |||||||||||| ||||||| || | ||||| |||| |||||||| |||
Sbjct: 117 ttgcagaaaggaacccatttctttgcaaattcagatgtttcggataatgcttcaaatgtc 58
Query: 2432 aacatagctgaaccgtcatcagaaacataacatgatactttgtcaacagggtaatc 2487
| ||| || | ||| |||||||| ||||| ||||| || || ||||| || |||||
Sbjct: 57 agcattgcagcaccatcatcagagacatagcatgaaacattatcaactggataatc 2
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtg 2028
|||||||||||||||||||||||
Sbjct: 483 ttcatggcaccagccttcttgtg 461
>gb|CF277610.1|CF277610 14ETL--03-D13.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--03-D13, mRNA sequence
Length = 437
Score = 48.1 bits (24), Expect = 0.027
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 448 acccacagcagcgagaatatggaagcaagaaggacggaccaaacaatgacgatggtcggt 507
|||||||||| ||||| || ||||| ||||||| | |||||||| |||||||||||
Sbjct: 357 acccacagcaatgagaagatcgaagccagaaggattgcccaaacaacaacgatggtcgga 416
Query: 508 gtgcggtt 515
||||||||
Sbjct: 417 gtgcggtt 424
>gb|CF311164.1|CF311164 ABF--06-E14.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--06-E14, mRNA sequence
Length = 363
Score = 48.1 bits (24), Expect = 0.027
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 544 gggtagaggtggaggatcacccagattgcaaagaacagcttcccgaatagtggaccccat 603
|||||||| ||| |||||||| | ||||||||| ||||||||||| || || ||||||
Sbjct: 269 gggtagagatggtcgatcacccgaaatgcaaagaagagcttcccgaagaggggtccccat 210
Query: 604 gatt 607
||||
Sbjct: 209 gatt 206
>gb|AQ579494.1|AQ579494 nbxb0084D07f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0084D07f, DNA sequence
Length = 815
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtg 2028
|||||||||||||||||||||||
Sbjct: 379 ttcatggcaccagccttcttgtg 357
>gb|AQ573837.1|AQ573837 nbxb0084P08r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0084P08r, DNA sequence
Length = 865
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtg 2028
|||||||||||||||||||||||
Sbjct: 426 ttcatggcaccagccttcttgtg 404
>gb|AQ577763.1|AQ577763 nbxb0091J21f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0091J21f, DNA sequence
Length = 564
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtg 2028
|||||||||||||||||||||||
Sbjct: 379 ttcatggcaccagccttcttgtg 357
>gb|AQ992398.1|AQ992398 nbeb0091C07f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone OSJNBb0091C07f, DNA
sequence
Length = 686
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2485 atccacagcaagaatggacagga 2507
|||||||||||||||||||||||
Sbjct: 92 atccacagcaagaatggacagga 70
>gb|C26670.1|C26670 C26670 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C12805_1A, mRNA sequence
Length = 459
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtg 2028
|||||||||||||||||||||||
Sbjct: 222 ttcatggcaccagccttcttgtg 200
>gb|D24655.1|D24655 RICR2325A Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R2325_1A, mRNA sequence
Length = 303
Score = 46.1 bits (23), Expect = 0.11
Identities = 77/95 (81%)
Strand = Plus / Minus
Query: 1811 gcatatcgatcatgcaagtctataccatcaaatctttgtggaaactgaacatagcaagtt 1870
|||||||||||||| ||| || ||||| ||||||||||| ||||| ||||| ||| |
Sbjct: 105 gcatatcgatcatgacggtcaatgccatcgaatctttgtgggaactgcacataacaaact 46
Query: 1871 ttccttcctagtgctggatccatcatgaaacacat 1905
||| |||||| ||||||||||| ||||||||
Sbjct: 45 ttctttcctaccaagggatccatcataaaacacat 11
>gb|CB672249.1|CB672249 OSJNEe06D04.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe06D04 5', mRNA sequence
Length = 758
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2006 ttcatggcaccagccttcttgtg 2028
|||||||||||||||||||||||
Sbjct: 268 ttcatggcaccagccttcttgtg 246
>emb|AL607097.1|OSJN01006 Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0082A03,
*** SEQUENCING IN PROGRESS ***
Length = 155150
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2485 atccacagcaagaatggacagga 2507
|||||||||||||||||||||||
Sbjct: 151497 atccacagcaagaatggacagga 151475
>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0681G01, complete sequence
Length = 184118
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 2485 atccacagcaagaatggacagga 2507
|||||||||||||||||||||||
Sbjct: 24569 atccacagcaagaatggacagga 24591
>gb|AACV01012856.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg012856, whole
genome shotgun sequence
Length = 23494
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2485 atccacagcaagaatggacagga 2507
|||||||||||||||||||||||
Sbjct: 2360 atccacagcaagaatggacagga 2338
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0075G19
Length = 163558
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2485 atccacagcaagaatggacagga 2507
|||||||||||||||||||||||
Sbjct: 60869 atccacagcaagaatggacagga 60847
>ref|NT_107230.2| Oryza sativa (japonica cultivar-group)
Length = 2805126
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2485 atccacagcaagaatggacagga 2507
|||||||||||||||||||||||
Sbjct: 159550 atccacagcaagaatggacagga 159528
Score = 42.1 bits (21), Expect = 1.7
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgt 2027
|||||||| ||||||||||||||||
Sbjct: 624678 gcattcatcgcaccagccttcttgt 624702
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046
genomic scaffold, whole genome shotgun sequence
Length = 8607552
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2485 atccacagcaagaatggacagga 2507
|||||||||||||||||||||||
Sbjct: 116325 atccacagcaagaatggacagga 116303
Score = 42.1 bits (21), Expect = 1.7
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgt 2027
|||||||| ||||||||||||||||
Sbjct: 554300 gcattcatcgcaccagccttcttgt 554324
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2485 atccacagcaagaatggacagga 2507
|||||||||||||||||||||||
Sbjct: 116325 atccacagcaagaatggacagga 116303
Score = 42.1 bits (21), Expect = 1.7
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgt 2027
|||||||| ||||||||||||||||
Sbjct: 554300 gcattcatcgcaccagccttcttgt 554324
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
complete sequence
Length = 30731886
Score = 46.1 bits (23), Expect = 0.11
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 2485 atccacagcaagaatggacagga 2507
|||||||||||||||||||||||
Sbjct: 195973 atccacagcaagaatggacagga 195951
Score = 42.1 bits (21), Expect = 1.7
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgt 2027
|||||||| ||||||||||||||||
Sbjct: 661101 gcattcatcgcaccagccttcttgt 661125
>gb|CB681901.1|CB681901 OSJNEf08K11.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf08K11 5', mRNA sequence
Length = 770
Score = 44.1 bits (22), Expect = 0.42
Identities = 64/78 (82%)
Strand = Plus / Minus
Query: 1137 aatttcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaat 1196
||||||||| || ||||||||||| || | || |||| |||||||| ||||||||||
Sbjct: 577 aatttcaacagatccaagagcccaacgaaggacctggtgaagacgatccgaaagattaag 518
Query: 1197 tggagcagaacccttgaa 1214
|| |||||||| |||||
Sbjct: 517 aggtgcagaacctttgaa 500
>gb|CV152460.1|CV152460 LS328-S.SEQ Cold stressed rice cDNA library Oryza sativa (japonica
cultivar-group) cDNA, mRNA sequence
Length = 637
Score = 44.1 bits (22), Expect = 0.42
Identities = 61/74 (82%)
Strand = Plus / Minus
Query: 1141 tcaactgaaccaagagcccagcgtaacacttggttgagacgatcagaaagattaattgga 1200
||||| ||||| |||||||| || | || |||| ||||||||||||||| || |||||
Sbjct: 326 tcaacggaaccgagagcccaccggagaacctggtggagacgatcagaaaggttgattggc 267
Query: 1201 gcagaacccttgaa 1214
|| || ||||||||
Sbjct: 266 gctgatcccttgaa 253
>gb|CF277078.1|CF277078 14ETL--02-H16.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--02-H16, mRNA sequence
Length = 412
Score = 42.1 bits (21), Expect = 1.7
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 740 cggttgcctttgatgtgaccgtgaagtttgtgtcgatccctgctagcac 788
|||| ||||| || ||||| |||||||| ||||||||||| || |||||
Sbjct: 318 cggtggccttggacgtgacggtgaagttggtgtcgatcccggccagcac 270
>dbj|AK102134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085F12, full
insert sequence
Length = 3968
Score = 42.1 bits (21), Expect = 1.7
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgt 2027
|||||||| ||||||||||||||||
Sbjct: 2248 gcattcatcgcaccagccttcttgt 2224
>dbj|AK102695.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103F21, full
insert sequence
Length = 2757
Score = 42.1 bits (21), Expect = 1.7
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgt 2027
|||||||| ||||||||||||||||
Sbjct: 943 gcattcatcgcaccagccttcttgt 919
>dbj|AK105393.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-B04, full
insert sequence
Length = 4089
Score = 42.1 bits (21), Expect = 1.7
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgt 2027
|||||||| ||||||||||||||||
Sbjct: 2137 gcattcatcgcaccagccttcttgt 2113
>tpg|BK000090.1| TPA: Oryza sativa (japonica cultivar-group) cellulose synthase-like
D2 gene, complete cds
Length = 5000
Score = 42.1 bits (21), Expect = 1.7
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgt 2027
|||||||| ||||||||||||||||
Sbjct: 2967 gcattcatcgcaccagccttcttgt 2943
>gb|AACV01012879.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg012879, whole
genome shotgun sequence
Length = 80883
Score = 42.1 bits (21), Expect = 1.7
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgt 2027
|||||||| ||||||||||||||||
Sbjct: 50760 gcattcatcgcaccagccttcttgt 50736
>dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic DNA, chromosome 6, PAC
clone:P0029D06
Length = 150120
Score = 42.1 bits (21), Expect = 1.7
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 2003 gcattcatggcaccagccttcttgt 2027
|||||||| ||||||||||||||||
Sbjct: 67529 gcattcatcgcaccagccttcttgt 67553
>ref|NM_185396.2| Oryza sativa (japonica cultivar-group), mRNA
Length = 3968
Score = 42.1 bits (21), Expect = 1.7
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 2003 gcattcatggcaccagccttcttgt 2027
|||||||| ||||||||||||||||
Sbjct: 2248 gcattcatcgcaccagccttcttgt 2224
>gb|C72208.1|C72208 C72208 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1220_1A, mRNA sequence
Length = 396
Score = 40.1 bits (20), Expect = 6.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 2018 gccttcttgtggtgctggaa 2037
||||||||||||||||||||
Sbjct: 314 gccttcttgtggtgctggaa 295
Database: Oryza_nucl_with_EST.fasta
Posted date: May 2, 2006 3:04 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,794,910
Number of Sequences: 438736
Number of extensions: 3794910
Number of successful extensions: 5592
Number of sequences better than 10.0: 193
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 4194
Number of HSP's gapped (non-prelim): 1248
length of query: 2856
length of database: 2,800,419,916
effective HSP length: 22
effective length of query: 2834
effective length of database: 2,790,767,724
effective search space: 7909035729816
effective search space used: 7909035729816
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)