BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804972.2.1
(1311 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK068824.1| Oryza sativa (japonica cultivar-group) cDNA... 591 e-166
ref|NM_193168.1| Oryza sativa (japonica cultivar-group), p... 591 e-166
dbj|AK059305.1| Oryza sativa (japonica cultivar-group) cDNA... 583 e-164
gb|CB645627.1|CB645627 OSJNEb07H08.f OSJNEb Oryza sativa (j... 398 e-108
gb|CF280694.1|CF280694 14ETL--07-H12.g1 Rice etiolated leaf... 357 1e-095
gb|CF330328.1|CF330328 NACL--05-P23.b1 Rice callus plasmid ... 311 5e-082
gb|AU162706.1|AU162706 AU162706 Rice mature leaf Oryza sati... 305 3e-080
gb|D15649.1|D15649 RICC1020A Rice callus Oryza sativa (japo... 293 1e-076
gb|D38888.1|D38888 RICC2051A Rice callus Oryza sativa (japo... 274 1e-070
gb|C28940.1|C28940 C28940 Rice callus cDNA Oryza sativa (ja... 264 1e-067
gb|AU067975.1|AU067975 AU067975 Rice callus Oryza sativa (j... 240 2e-060
gb|CB645628.1|CB645628 OSJNEb07H08.r OSJNEb Oryza sativa (j... 224 9e-056
gb|AU165252.1|AU165252 AU165252 Rice callus Oryza sativa (j... 218 6e-054
gb|CF280693.1|CF280693 14ETL--07-H12.b1 Rice etiolated leaf... 214 9e-053
gb|CF330329.1|CF330329 NACL--05-P23.g1 Rice callus plasmid ... 206 2e-050
gb|AU056682.1|AU056682 AU056682 Oryza sativa mature leaf Ni... 182 3e-043
gb|AACV01001386.1| Oryza sativa (japonica cultivar-group) c... 182 3e-043
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 182 3e-043
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 182 3e-043
dbj|AP003370.3| Oryza sativa (japonica cultivar-group) geno... 182 3e-043
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 182 3e-043
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 182 3e-043
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 182 3e-043
gb|AU181856.1|AU181856 AU181856 Rice callus (2001) Oryza sa... 168 5e-039
gb|AU067974.1|AU067974 AU067974 Rice callus Oryza sativa (j... 149 4e-033
gb|AU093494.1|AU093494 AU093494 Rice callus Oryza sativa (j... 149 4e-033
gb|AU181468.1|AU181468 AU181468 Rice callus (2001) Oryza sa... 135 7e-029
gb|AU163616.1|AU163616 AU163616 Rice panicle at flowering s... 131 1e-027
gb|AU197714.1|AU197714 AU197714 Rice mature leaf Oryza sati... 131 1e-027
gb|AU069349.1|AU069349 AU069349 Rice callus Oryza sativa (j... 129 4e-027
gb|AU069566.1|AU069566 AU069566 Rice callus Oryza sativa (j... 109 4e-021
gb|D40184.1|D40184 RICS1972A Rice shoot Oryza sativa (japon... 103 2e-019
gb|AU093493.1|AU093493 AU093493 Rice callus Oryza sativa (j... 103 2e-019
gb|CA997959.1|CA997959 S234D1_D11 Rice cold stress germinat... 103 2e-019
gb|C98735.1|C98735 C98735 Rice panicle at flowering stage O... 101 9e-019
gb|CF326219.1|CF326219 JMT1--05-G24.g1 AtJMT-overexpressing... 96 6e-017
gb|AU166661.1|AU166661 AU166661 Rice callus (2001) Oryza sa... 94 2e-016
gb|D22126.1|D22126 RICC10383A Rice callus Oryza sativa (jap... 90 4e-015
gb|AU062682.2|AU062682 AU062682 Rice callus Oryza sativa (j... 88 1e-014
gb|AU181857.1|AU181857 AU181857 Rice callus (2001) Oryza sa... 72 8e-010
gb|AU182030.1|AU182030 AU182030 Rice callus (2001) Oryza sa... 72 8e-010
gb|AACV01002608.1| Oryza sativa (japonica cultivar-group) c... 68 1e-008
ref|NM_190422.1| Oryza sativa (japonica cultivar-group), p... 68 1e-008
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 68 1e-008
dbj|AP003734.3| Oryza sativa (japonica cultivar-group) geno... 68 1e-008
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 68 1e-008
dbj|AK070746.1| Oryza sativa (japonica cultivar-group) cDNA... 64 2e-007
dbj|AP004087.3| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
ref|XM_464328.1| Oryza sativa (japonica cultivar-group), mRNA 64 2e-007
ref|NT_107176.1| Oryza sativa (japonica cultivar-group) 64 2e-007
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
gb|AACV01003485.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|AACV01020319.1| Oryza sativa (japonica cultivar-group) c... 52 8e-004
gb|AC108762.2| Oryza sativa (japonica cultivar-group) chrom... 52 8e-004
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 52 8e-004
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 52 8e-004
gb|C28380.1|C28380 C28380 Rice callus cDNA Oryza sativa (ja... 48 0.012
dbj|AB010745.1| Oryza sativa (japonica cultivar-group) gene... 46 0.048
dbj|AB003496.1| Oryza sativa (japonica cultivar-group) mRNA... 46 0.048
dbj|AP003688.1| Oryza sativa (japonica cultivar-group) chro... 46 0.048
dbj|AP004655.2| Oryza sativa (japonica cultivar-group) chro... 46 0.048
dbj|AB010744.1| Oryza sativa (japonica cultivar-group) gene... 46 0.048
dbj|AB003495.1| Oryza sativa (japonica cultivar-group) DNA ... 46 0.048
dbj|AK106439.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.048
dbj|AP005415.2| Oryza sativa (japonica cultivar-group) geno... 46 0.048
gb|AACV01001905.1| Oryza sativa (japonica cultivar-group) c... 46 0.048
gb|AACV01017860.1| Oryza sativa (japonica cultivar-group) c... 46 0.048
dbj|AP004317.1| Oryza sativa (japonica cultivar-group) geno... 46 0.048
ref|XM_481219.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.048
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 46 0.048
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.048
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.048
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 46 0.048
gb|AF101045.1| Oryza sativa (japonica cultivar-group) putat... 46 0.048
>dbj|AK068824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162A03, full
insert sequence
Length = 1334
Score = 591 bits (298), Expect = e-166
Identities = 787/950 (82%)
Strand = Plus / Plus
Query: 114 gggacggggaaggtggtgtgcgtcaccggcgcatcagggtacatcgcgtcctggattgtc 173
||||| |||||| ||||||||||||||||||| || |||||||||||||| ||| | |||
Sbjct: 189 gggaccgggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtc 248
Query: 174 aggctcctcctcgaccgcggctacaccgtccgcgccaccgtgcgagacaccgctgaccca 233
||||| ||||||| |||||||||||| |||||||||||| | || |||||| ||||||||
Sbjct: 249 aggctgctcctcgcccgcggctacacggtccgcgccaccatccgggacacctctgaccca 308
Query: 234 aagaaaacattgcacctgactgcgttggatggtgctaaggataggctgcacttatttaaa 293
||||||||| | |||||| ||| ||||||| || || || || || || || || ||
Sbjct: 309 aagaaaacactacacctgcgtgccctggatggagccaacgaaagactccatttgttcgaa 368
Query: 294 gctagcctgctagaagagggttctttcgatgctgcagttcatggatgcgacactgtattt 353
|| | ||||| |||||||| |||||||||||||| || |||| || || ||| ||
Sbjct: 369 gcaaatctgctggaagagggctctttcgatgctgcggtcaatggttgtgattgtgttttc 428
Query: 354 catactgcctctcccttttatcacaatgtcaaggatgctaaggcagagttacttgaccca 413
||||| || ||||||||||| |||||||| || ||| ||||||| ||||||||||||||
Sbjct: 429 catacggcttctcccttttaccacaatgttaaagatcctaaggctgagttacttgaccct 488
Query: 414 gcagttaagggaacactcaatgttctcggttcatgcaagaaagcttctattaaaaaggtg 473
||||| || ||||| || |||||||| || || |||||||||||||| |||| || ||
Sbjct: 489 gcagtcaaaggaacccttaatgttctaggctcctgcaagaaagcttccattagaagagtt 548
Query: 474 gttgtaacatcatctatggctgctgtagcctacaacgggaggccaaggactcctgaggtc 533
| || |||||||| ||||||||||| |||||||| |||| ||||| |||||||| ||
Sbjct: 549 atcgtgacatcatccatggctgctgttgcctacaatgggaaaccaagaactcctgatgta 608
Query: 534 acagttgacgagacatggttttctgatccacaaatttgtgaaacaaatcagcaatggtat 593
||||| |||||||||||||| | |||| | |||||||||| ||||||||||||||
Sbjct: 609 gttgttgatgagacatggttttcagttccagagatttgtgaaaagcatcagcaatggtat 668
Query: 594 attttgtccaagacgctggcagaggaggctgcttggaagttctcaagggataatggactt 653
|| |||||||||| || ||||||||||||||||||||||| |||| ||||||||| ||
Sbjct: 669 gttctgtccaagaccctagcagaggaggctgcttggaagttttcaaaagataatggattt 728
Query: 654 gaaatcgttactataaacccagcgatggttattggtcccctgctgcagcctacactaaat 713
||||| ||||| | |||||||| ||||| ||||||||||||||||||||| |||| |||
Sbjct: 729 gaaatagttacggtgaacccagcaatggtcattggtcccctgctgcagccttcactgaat 788
Query: 714 accagtgctgaagcaatcctgaagttaatcaatgggtcatcgtctacatatcccaatttt 773
|| |||||||||||||| |||||| |||||||||| ||||| || |||||||| |||||
Sbjct: 789 actagtgctgaagcaattctgaagctaatcaatggatcatcctcgacatatcctaatttc 848
Query: 774 tgctttggatgggttaatgtcaaggatgttgccctggcccatatccttgcatacgaggtt 833
||||||| ||| | || || ||||||||||||||||| |||||||||||||| || |||
Sbjct: 849 agctttggctggataaacgttaaggatgttgccctggcacatatccttgcatatgaagtt 908
Query: 834 ccctcatcaaatggaaggtactgcatggtggaaagagttgttcactactcagaactggtg 893
|| ||| |||||||||| || |||||||| |||||||||| ||||||||||| || ||
Sbjct: 909 ccttcagcaaatggaagatattgcatggttgaaagagttgcgcactactcagagctcgtc 968
Query: 894 aacattatccgcaacatgtatcctacccttcctcttccggacaagtgtgcagatgacaag 953
| || || || | |||||||| | ||||||| || |||||||||||||||||||||
Sbjct: 969 caaatcattcgtgagatgtatcccaatattcctctgccagacaagtgtgcagatgacaag 1028
Query: 954 ccgtttgtcccaccctaccaagtatcaaaggagaagataaaaagcataggcatcgagttg 1013
|| | || ||| |||||| ||||||||||| |||||||||||| | ||| | || ||
Sbjct: 1029 ccatcagtgccaatctaccaggtatcaaaggaaaagataaaaagcttgggcctggaactg 1088
Query: 1014 attccactggagacgagcgtcaaggagaccatcgaaagcttgaaagagaa 1063
| ||| ||| | |||||| |||||||||||||||| ||||||||||||||
Sbjct: 1089 actcccctgcacacgagcatcaaggagaccatcgagagcttgaaagagaa 1138
>ref|NM_193168.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1359
Score = 591 bits (298), Expect = e-166
Identities = 787/950 (82%)
Strand = Plus / Plus
Query: 114 gggacggggaaggtggtgtgcgtcaccggcgcatcagggtacatcgcgtcctggattgtc 173
||||| |||||| ||||||||||||||||||| || |||||||||||||| ||| | |||
Sbjct: 376 gggaccgggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtc 435
Query: 174 aggctcctcctcgaccgcggctacaccgtccgcgccaccgtgcgagacaccgctgaccca 233
||||| ||||||| |||||||||||| |||||||||||| | || |||||| ||||||||
Sbjct: 436 aggctgctcctcgcccgcggctacacggtccgcgccaccatccgggacacctctgaccca 495
Query: 234 aagaaaacattgcacctgactgcgttggatggtgctaaggataggctgcacttatttaaa 293
||||||||| | |||||| ||| ||||||| || || || || || || || || ||
Sbjct: 496 aagaaaacactacacctgcgtgccctggatggagccaacgaaagactccatttgttcgaa 555
Query: 294 gctagcctgctagaagagggttctttcgatgctgcagttcatggatgcgacactgtattt 353
|| | ||||| |||||||| |||||||||||||| || |||| || || ||| ||
Sbjct: 556 gcaaatctgctggaagagggctctttcgatgctgcggtcaatggttgtgattgtgttttc 615
Query: 354 catactgcctctcccttttatcacaatgtcaaggatgctaaggcagagttacttgaccca 413
||||| || ||||||||||| |||||||| || ||| ||||||| ||||||||||||||
Sbjct: 616 catacggcttctcccttttaccacaatgttaaagatcctaaggctgagttacttgaccct 675
Query: 414 gcagttaagggaacactcaatgttctcggttcatgcaagaaagcttctattaaaaaggtg 473
||||| || ||||| || |||||||| || || |||||||||||||| |||| || ||
Sbjct: 676 gcagtcaaaggaacccttaatgttctaggctcctgcaagaaagcttccattagaagagtt 735
Query: 474 gttgtaacatcatctatggctgctgtagcctacaacgggaggccaaggactcctgaggtc 533
| || |||||||| ||||||||||| |||||||| |||| ||||| |||||||| ||
Sbjct: 736 atcgtgacatcatccatggctgctgttgcctacaatgggaaaccaagaactcctgatgta 795
Query: 534 acagttgacgagacatggttttctgatccacaaatttgtgaaacaaatcagcaatggtat 593
||||| |||||||||||||| | |||| | |||||||||| ||||||||||||||
Sbjct: 796 gttgttgatgagacatggttttcagttccagagatttgtgaaaagcatcagcaatggtat 855
Query: 594 attttgtccaagacgctggcagaggaggctgcttggaagttctcaagggataatggactt 653
|| |||||||||| || ||||||||||||||||||||||| |||| ||||||||| ||
Sbjct: 856 gttctgtccaagaccctagcagaggaggctgcttggaagttttcaaaagataatggattt 915
Query: 654 gaaatcgttactataaacccagcgatggttattggtcccctgctgcagcctacactaaat 713
||||| ||||| | |||||||| ||||| ||||||||||||||||||||| |||| |||
Sbjct: 916 gaaatagttacggtgaacccagcaatggtcattggtcccctgctgcagccttcactgaat 975
Query: 714 accagtgctgaagcaatcctgaagttaatcaatgggtcatcgtctacatatcccaatttt 773
|| |||||||||||||| |||||| |||||||||| ||||| || |||||||| |||||
Sbjct: 976 actagtgctgaagcaattctgaagctaatcaatggatcatcctcgacatatcctaatttc 1035
Query: 774 tgctttggatgggttaatgtcaaggatgttgccctggcccatatccttgcatacgaggtt 833
||||||| ||| | || || ||||||||||||||||| |||||||||||||| || |||
Sbjct: 1036 agctttggctggataaacgttaaggatgttgccctggcacatatccttgcatatgaagtt 1095
Query: 834 ccctcatcaaatggaaggtactgcatggtggaaagagttgttcactactcagaactggtg 893
|| ||| |||||||||| || |||||||| |||||||||| ||||||||||| || ||
Sbjct: 1096 ccttcagcaaatggaagatattgcatggttgaaagagttgcgcactactcagagctcgtc 1155
Query: 894 aacattatccgcaacatgtatcctacccttcctcttccggacaagtgtgcagatgacaag 953
| || || || | |||||||| | ||||||| || |||||||||||||||||||||
Sbjct: 1156 caaatcattcgtgagatgtatcccaatattcctctgccagacaagtgtgcagatgacaag 1215
Query: 954 ccgtttgtcccaccctaccaagtatcaaaggagaagataaaaagcataggcatcgagttg 1013
|| | || ||| |||||| ||||||||||| |||||||||||| | ||| | || ||
Sbjct: 1216 ccatcagtgccaatctaccaggtatcaaaggaaaagataaaaagcttgggcctggaactg 1275
Query: 1014 attccactggagacgagcgtcaaggagaccatcgaaagcttgaaagagaa 1063
| ||| ||| | |||||| |||||||||||||||| ||||||||||||||
Sbjct: 1276 actcccctgcacacgagcatcaaggagaccatcgagagcttgaaagagaa 1325
>dbj|AK059305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-F12, full
insert sequence
Length = 1322
Score = 583 bits (294), Expect = e-164
Identities = 786/950 (82%)
Strand = Plus / Plus
Query: 114 gggacggggaaggtggtgtgcgtcaccggcgcatcagggtacatcgcgtcctggattgtc 173
||||| |||||| ||||||||||||||||||| || |||||||||||||| ||| | |||
Sbjct: 201 gggaccgggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtc 260
Query: 174 aggctcctcctcgaccgcggctacaccgtccgcgccaccgtgcgagacaccgctgaccca 233
||||| ||||||| |||||||||||| |||||||||||| | || |||||| ||||||||
Sbjct: 261 aggctgctcctcgcccgcggctacacggtccgcgccaccatccgggacacctctgaccca 320
Query: 234 aagaaaacattgcacctgactgcgttggatggtgctaaggataggctgcacttatttaaa 293
||||||||| | |||||| ||| ||||||| || || || || || || || || ||
Sbjct: 321 aagaaaacactacacctgcgtgccctggatggagccaacgaaagactccatttgttcgaa 380
Query: 294 gctagcctgctagaagagggttctttcgatgctgcagttcatggatgcgacactgtattt 353
|| | ||||| |||||||| |||||||||||||| || |||| || || ||| ||
Sbjct: 381 gcaaatctgctggaagagggctctttcgatgctgcggtcaatggttgtgattgtgttttc 440
Query: 354 catactgcctctcccttttatcacaatgtcaaggatgctaaggcagagttacttgaccca 413
||||| || ||||||||||| |||||||| || ||| | ||||| ||||||||||||||
Sbjct: 441 catacggcttctcccttttaccacaatgttaaagatcccaaggctgagttacttgaccct 500
Query: 414 gcagttaagggaacactcaatgttctcggttcatgcaagaaagcttctattaaaaaggtg 473
||||| || ||||| || |||||||| || || |||||||||||||| |||| || ||
Sbjct: 501 gcagtcaaaggaacccttaatgttctaggctcctgcaagaaagcttccattagaagagtt 560
Query: 474 gttgtaacatcatctatggctgctgtagcctacaacgggaggccaaggactcctgaggtc 533
| || |||||||| ||||||||||| |||||||| |||| ||||| |||||||| ||
Sbjct: 561 atcgtgacatcatccatggctgctgttgcctacaatgggaaaccaagaactcctgatgta 620
Query: 534 acagttgacgagacatggttttctgatccacaaatttgtgaaacaaatcagcaatggtat 593
||||| |||||||||||||| | |||| | |||||||||| ||||||||||||||
Sbjct: 621 gttgttgatgagacatggttttcagttccagagatttgtgaaaagcatcagcaatggtat 680
Query: 594 attttgtccaagacgctggcagaggaggctgcttggaagttctcaagggataatggactt 653
|| |||||||||| || ||||||||||||||||||||||| |||| ||||||||| ||
Sbjct: 681 gttctgtccaagaccctagcagaggaggctgcttggaagttttcaaaagataatggattt 740
Query: 654 gaaatcgttactataaacccagcgatggttattggtcccctgctgcagcctacactaaat 713
||||| ||||| | |||||||| ||||| ||||||||||||||||||||| |||| |||
Sbjct: 741 gaaatagttacggtgaacccagcaatggtcattggtcccctgctgcagccttcactgaat 800
Query: 714 accagtgctgaagcaatcctgaagttaatcaatgggtcatcgtctacatatcccaatttt 773
|| |||||||||||||| |||||| |||||||||| ||||| || |||||||| |||||
Sbjct: 801 actagtgctgaagcaattctgaagctaatcaatggatcatcctcgacatatcctaatttc 860
Query: 774 tgctttggatgggttaatgtcaaggatgttgccctggcccatatccttgcatacgaggtt 833
||||||| ||| | || || ||||||||||||||||| |||||||||||||| || |||
Sbjct: 861 agctttggctggataaacgttaaggatgttgccctggcacatatccttgcatatgaagtt 920
Query: 834 ccctcatcaaatggaaggtactgcatggtggaaagagttgttcactactcagaactggtg 893
|| ||| |||||||||| || |||||||| |||||||||| ||||||||||| || ||
Sbjct: 921 ccttcagcaaatggaagatattgcatggttgaaagagttgcgcactactcagagctcgtc 980
Query: 894 aacattatccgcaacatgtatcctacccttcctcttccggacaagtgtgcagatgacaag 953
| || || || | |||||||| | ||||||| || |||||||||||||||||||||
Sbjct: 981 caaatcattcgtgagatgtatcccaatattcctctgccagacaagtgtgcagatgacaag 1040
Query: 954 ccgtttgtcccaccctaccaagtatcaaaggagaagataaaaagcataggcatcgagttg 1013
|| | || ||| |||||| ||||||||||| |||||||||||| | ||| | || ||
Sbjct: 1041 ccatcagtgccaatctaccaggtatcaaaggaaaagataaaaagcttgggcctggaactg 1100
Query: 1014 attccactggagacgagcgtcaaggagaccatcgaaagcttgaaagagaa 1063
| ||| ||| | |||||| |||||||||||||||| ||||||||||||||
Sbjct: 1101 actcccctgcacacgagcatcaaggagaccatcgagagcttgaaagagaa 1150
>gb|CB645627.1|CB645627 OSJNEb07H08.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb07H08 5', mRNA sequence
Length = 784
Score = 398 bits (201), Expect = e-108
Identities = 513/617 (83%)
Strand = Plus / Plus
Query: 114 gggacggggaaggtggtgtgcgtcaccggcgcatcagggtacatcgcgtcctggattgtc 173
||||| |||||| ||||||||||||||||||| || |||||||||||||| ||| | |||
Sbjct: 165 gggaccgggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtc 224
Query: 174 aggctcctcctcgaccgcggctacaccgtccgcgccaccgtgcgagacaccgctgaccca 233
||||| ||||||| |||||||||||| |||||||||||| | || |||||| ||||||||
Sbjct: 225 aggctgctcctcgcccgcggctacacggtccgcgccaccatccgggacacctctgaccca 284
Query: 234 aagaaaacattgcacctgactgcgttggatggtgctaaggataggctgcacttatttaaa 293
||||||||| | |||||| ||| ||||||| || || || || || || || || ||
Sbjct: 285 aagaaaacactacacctgcgtgccctggatggagccaacgaaagactccatttgttcgaa 344
Query: 294 gctagcctgctagaagagggttctttcgatgctgcagttcatggatgcgacactgtattt 353
|| | ||||| |||||||| |||||||||||||| || |||| || || ||| ||
Sbjct: 345 gcaaatctgctggaagagggctctttcgatgctgcggtcaatggttgtgattgtgttttc 404
Query: 354 catactgcctctcccttttatcacaatgtcaaggatgctaaggcagagttacttgaccca 413
||||| || ||||||||||| |||||||| || ||| ||||||| ||||||||||||||
Sbjct: 405 catacggcttctcccttttaccacaatgttaaagatcctaaggctgagttacttgaccct 464
Query: 414 gcagttaagggaacactcaatgttctcggttcatgcaagaaagcttctattaaaaaggtg 473
||||| || ||||| || |||||||| || || |||||||||||||| |||| || ||
Sbjct: 465 gcagtcaaaggaacccttaatgttctaggctcctgcaagaaagcttccattagaagagtt 524
Query: 474 gttgtaacatcatctatggctgctgtagcctacaacgggaggccaaggactcctgaggtc 533
| || |||||||| ||||||||||| |||||||| |||| ||||| |||||||| ||
Sbjct: 525 atcgtgacatcatccatggctgctgttgcctacaatgggaaaccaagaactcctgatgta 584
Query: 534 acagttgacgagacatggttttctgatccacaaatttgtgaaacaaatcagcaatggtat 593
||||| |||||||||||||| | |||| | |||||||||| ||||||||||||||
Sbjct: 585 gttgttgatgagacatggttttcagttccagagatttgtgaaaagcatcagcaatggtat 644
Query: 594 attttgtccaagacgctggcagaggaggctgcttggaagttctcaagggataatggactt 653
|| |||||||||| || ||||||||||||||||||||||| |||| ||||||||| ||
Sbjct: 645 gttctgtccaagaccctagcagaggaggctgcttggaagttttcaaaagataatggattt 704
Query: 654 gaaatcgttactataaacccagcgatggttattggtcccctgctgcagcctacactaaat 713
||||| ||||| | |||||||| ||||| ||||||||||||||||||||| |||| |||
Sbjct: 705 gaaatagttacggtgaacccagcaatggtcattggtcccctgctgcagccttcactgaat 764
Query: 714 accagtgctgaagcaat 730
|| ||||||||||||||
Sbjct: 765 actagtgctgaagcaat 781
>gb|CF280694.1|CF280694 14ETL--07-H12.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--07-H12, mRNA sequence
Length = 716
Score = 357 bits (180), Expect = 1e-095
Identities = 408/484 (84%)
Strand = Plus / Minus
Query: 580 atcagcaatggtatattttgtccaagacgctggcagaggaggctgcttggaagttctcaa 639
|||||||||||||| || |||||||||| || ||||||||||||||||||||||| ||||
Sbjct: 711 atcagcaatggtatgttctgtccaagaccctagcagaggaggctgcttggaagttttcaa 652
Query: 640 gggataatggacttgaaatcgttactataaacccagcgatggttattggtcccctgctgc 699
||||||||| ||||||| ||||| | |||||||| ||||| ||||||||||||||||
Sbjct: 651 aagataatggatttgaaatagttacggtgaacccagcaatggtcattggtcccctgctgc 592
Query: 700 agcctacactaaataccagtgctgaagcaatcctgaagttaatcaatgggtcatcgtcta 759
||||| |||| ||||| |||||||||||||| |||||| |||||||||| ||||| || |
Sbjct: 591 agccttcactgaatactagtgctgaagcaattctgaagctaatcaatggatcatcctcga 532
Query: 760 catatcccaatttttgctttggatgggttaatgtcaaggatgttgccctggcccatatcc 819
||||||| ||||| ||||||| ||| | || || ||||||||||||||||| |||||||
Sbjct: 531 catatcctaatttcagctttggctggataaacgttaaggatgttgccctggcacatatcc 472
Query: 820 ttgcatacgaggttccctcatcaaatggaaggtactgcatggtggaaagagttgttcact 879
||||||| || ||||| ||| |||||||||| || |||||||| |||||||||| ||||
Sbjct: 471 ttgcatatgaagttccttcagcaaatggaagatattgcatggttgaaagagttgcgcact 412
Query: 880 actcagaactggtgaacattatccgcaacatgtatcctacccttcctcttccggacaagt 939
||||||| || || | || || || | |||||||| | ||||||| || |||||||
Sbjct: 411 actcagagctcgtccaaatcattcgtgagatgtatcccaatattcctctgccagacaagt 352
Query: 940 gtgcagatgacaagccgtttgtcccaccctaccaagtatcaaaggagaagataaaaagca 999
|||||||||||||||| | || ||| |||||| ||||||||||| ||||||||||||
Sbjct: 351 gtgcagatgacaagccatcagtgccaatctaccaggtatcaaaggaaaagataaaaagct 292
Query: 1000 taggcatcgagttgattccactggagacgagcgtcaaggagaccatcgaaagcttgaaag 1059
| ||| | || ||| ||| ||| | |||||| |||||||||||||||| ||||||||||
Sbjct: 291 tgggcctggaactgactcccctgcacacgagcatcaaggagaccatcgagagcttgaaag 232
Query: 1060 agaa 1063
||||
Sbjct: 231 agaa 228
>gb|CF330328.1|CF330328 NACL--05-P23.b1 Rice callus plasmid cDNA library (NACL) Oryza sativa
(japonica cultivar-group) cDNA clone NACL--05-P23, mRNA
sequence
Length = 634
Score = 311 bits (157), Expect = 5e-082
Identities = 373/445 (83%)
Strand = Plus / Minus
Query: 619 aggctgcttggaagttctcaagggataatggacttgaaatcgttactataaacccagcga 678
|||||||||||||||| |||| ||||||||| ||||||| ||||| | |||||||| |
Sbjct: 634 aggctgcttggaagttttcaaaagataatggatttgaaatagttacggtgaacccagcaa 575
Query: 679 tggttattggtcccctgctgcagcctacactaaataccagtgctgaagcaatcctgaagt 738
|||| ||||||||||||||||||||| |||| ||||| |||||||||||||| |||||||
Sbjct: 574 tggtcattggtcccctgctgcagccttcactgaatactagtgctgaagcaattctgaagt 515
Query: 739 taatcaatgggtcatcgtctacatatcccaatttttgctttggatgggttaatgtcaagg 798
|||||||||| ||||| || |||||||| ||||| ||||||| ||| | || || ||||
Sbjct: 514 taatcaatggatcatcctcgacatatcctaatttcagctttggctggataaacgttaagg 455
Query: 799 atgttgccctggcccatatccttgcatacgaggttccctcatcaaatggaaggtactgca 858
||||||||||||| |||||||||||||| || ||||| ||| |||||||||| || ||||
Sbjct: 454 atgttgccctggcacatatccttgcatatgaagttccttcagcaaatggaagatattgca 395
Query: 859 tggtggaaagagttgttcactactcagaactggtgaacattatccgcaacatgtatccta 918
|||| |||||||||| ||||||||||| || || | || || || | |||||||| |
Sbjct: 394 tggttgaaagagttgcgcactactcagagctcgtccaaatcattcgtgagatgtatccca 335
Query: 919 cccttcctcttccggacaagtgtgcagatgacaagccgtttgtcccaccctaccaagtat 978
||||||| || ||||||||||||||||||||||| | || ||| ||||| ||||
Sbjct: 334 atattcctctgccagacaagtgtgcagatgacaagccatcagtgccaatttaccaggtat 275
Query: 979 caaaggagaagataaaaagcataggcatcgagttgattccactggagacgagcgtcaagg 1038
||||||| |||||||||||| | ||| | || ||| ||| ||| | |||||| ||||||
Sbjct: 274 caaaggaaaagataaaaagcttgggcctggaactgactcccctgcacacgagcatcaagg 215
Query: 1039 agaccatcgaaagcttgaaagagaa 1063
|||||||||| ||||||||||||||
Sbjct: 214 agaccatcgagagcttgaaagagaa 190
>gb|AU162706.1|AU162706 AU162706 Rice mature leaf Oryza sativa (japonica cultivar-group)
cDNA clone S20782, mRNA sequence
Length = 698
Score = 305 bits (154), Expect = 3e-080
Identities = 447/544 (82%), Gaps = 1/544 (0%)
Strand = Plus / Plus
Query: 114 gggacggggaaggtggtgtgcgtcaccggcgcatcagggtacatcgcgtcctggattgtc 173
||||| |||||| ||||||||||||||||||| || |||||||||||||| ||| | |||
Sbjct: 156 gggaccgggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtc 215
Query: 174 aggctcctcctcgaccgcggctacaccgtccgcgccaccgtgcgagacaccgctgaccca 233
||||| ||||||| |||||||||||| |||||||||||| | || |||||| ||||||||
Sbjct: 216 aggctgctcctcgcccgcggctacacggtccgcgccaccatccgggacacctctgaccca 275
Query: 234 aagaaaacattgcacctgactgcgttggatggtgctaaggataggctgcacttatttaaa 293
||||||||| | |||||| ||| ||||||| || || || || || || || || ||
Sbjct: 276 aagaaaacactacacctgcgtgccctggatggagccaacgaaagactccatttgttcgaa 335
Query: 294 gctagcctgctagaagagggttctttcgatgctgcagttcatggatgcgacactgtattt 353
|| | ||||| |||||||| |||||||||||||| || |||| || || ||| ||
Sbjct: 336 gcaaatctgctggaagagggctctttcgatgctgcggtcaatggttgtgattgtgttttc 395
Query: 354 catactgcctctcccttttatcacaatgtcaaggatgctaaggcagagttacttgaccca 413
||||| || ||||||||||| |||||||| || ||| ||||||| ||||||||||||||
Sbjct: 396 catacggcttctcccttttaccacaatgttaaagatcctaaggctgagttacttgaccct 455
Query: 414 gcagttaagggaacactcaatgttctcggttcatgcaagaaagcttctattaaaaaggtg 473
||||| || ||||| || |||||||| || || |||||||||||||| |||| || ||
Sbjct: 456 gcagtcaaaggaacccttaatgttctaggctcctgcaagaaagcttccattagaagagtt 515
Query: 474 gttgtaacatcatctatggctgctgtagcctacaacgggaggccaaggactcctgaggtc 533
| || | |||||| ||||||||||| |||||||| |||| ||||| |||||||| ||
Sbjct: 516 atcgtganatcatccatggctgctgttgcctacaatgggaaaccaagaactcctgatgt- 574
Query: 534 acagttgacgagacatggttttctgatccacaaatttgtgaaacaaatcagcaatggtat 593
| ||||| |||||||||||||| | |||| | |||||||||| ||||||||||||||
Sbjct: 575 attgttgatgagacatggttttcagttccagagatttgtgaaaagcatcagcaatggtat 634
Query: 594 attttgtccaagacgctggcagaggaggctgcttggaagttctcaagggataatggactt 653
|| |||||||||| || |||||||||||||||||||||| |||| |||||||| ||
Sbjct: 635 gttctgtccaagaccctaacagaggaggctgcttggaagttttcaaaagataatggnttt 694
Query: 654 gaaa 657
||||
Sbjct: 695 gaaa 698
>gb|D15649.1|D15649 RICC1020A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C1020A, mRNA sequence
Length = 545
Score = 293 bits (148), Expect = 1e-076
Identities = 386/465 (83%), Gaps = 1/465 (0%)
Strand = Plus / Plus
Query: 423 ggaacactcaatgttctcggttcatgcaagaaagcttctattaaaaaggtggttgtaaca 482
||||| || |||||||| || || |||||||||||||| |||| || || | || |||
Sbjct: 1 ggaacccttaatgttctaggctcctgcaagaaagcttccattagaagagttatcgtgaca 60
Query: 483 tcatctatggctgctgtagcctacaacgggaggccaaggactcctgaggtcacagttgac 542
||||| ||||||||||| |||||||| |||| ||||| |||||||| || |||||
Sbjct: 61 tcatccatggctgctgttgcctacaatgggaaaccaagaactcctgatgtagttgttgat 120
Query: 543 gagacatggttttctgatccacaaatttgtgaaacaaatcagcaatggtatattttgtcc 602
|||||||||||||| | |||| | |||||||||| |||||||||||||| || |||||
Sbjct: 121 gagacatggttttcagttccagagatttgtgaaaagcatcagcaatggtatgttctgtcc 180
Query: 603 aagacgctggcagaggaggctgcttggaagttctcaagggataatggacttgaaatcgtt 662
||||| || ||||||||||||||||||||||| |||| ||||||||| ||||||| |||
Sbjct: 181 aagaccctagcagaggaggctgcttggaagttttcaaaagataatggatttgaaatagtt 240
Query: 663 actataaacccagcgatggttattggtcccctgctgcagcctacactaaataccagtgct 722
|| | |||||||| ||||| ||||||||||||||||||||| |||| ||||| ||||||
Sbjct: 241 acggtgaacccagcaatggtcattggtcccctgctgcagccttcactgaatactagtgct 300
Query: 723 gaagcaatcctgaagttaatcaatgggtcatcgtctacatatcccaatttttgctttgga 782
|||||||| || ||| |||||||||| ||||| || |||||||| |||| |||||||
Sbjct: 301 gaagcaattctnaagctaatcaatggatcatcctcgacatatcctaattncagctttggc 360
Query: 783 tgggttaatgtcaaggatgttgccctggcccatatccttgcatacgaggttccctcatca 842
||| | || || |||||||||||||||| |||||||||||||| | ||||| ||| ||
Sbjct: 361 tggataaacgttaaggatgttgccctggnacatatccttgcatatggagttccttcagca 420
Query: 843 aatggaagg-tactgcatggtggaaagagttgttcactactcaga 886
||||| ||| || |||||||| | |||||||| ||||||||||
Sbjct: 421 aatgggaggatattgcatggttggaagagttgcggactactcaga 465
>gb|D38888.1|D38888 RICC2051A Rice callus Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 362
Score = 274 bits (138), Expect = 1e-070
Identities = 303/357 (84%), Gaps = 1/357 (0%)
Strand = Plus / Plus
Query: 480 acatcatctatggctgctgtagcctacaacgggaggccaaggactcctgaggtcacagtt 539
|||||||| ||||||||||| |||||||| |||| ||||| |||||||| || |||
Sbjct: 2 acatcatccatggctgctgttgcctacaatgggaaaccaagaactcctgatgtagttgtt 61
Query: 540 gacgagacatggttttctgatccacaaatttgtgaaacaaatcagcaatggtatattttg 599
|| |||||||||||||| | |||| | |||||||||| |||||||||||||| || ||
Sbjct: 62 gatgagacatggttttcagttccagagatttgtgaaaagcatcagcaatggtatgttctg 121
Query: 600 tccaagacgctggcagaggaggctgcttggaagttctcaagggataatggacttgaaatc 659
|||||||| || ||||||||||||||||||||||| |||| ||||||||| |||||||
Sbjct: 122 tccaagaccctagcagaggaggctgcttggaagttttcaaaagataatggatttgaaata 181
Query: 660 gttactataaacccagcgatggttattggtcccctgctgcagcctacactaaataccagt 719
||||| | |||||||| ||||| ||||||||||||||||||||| |||| ||||| |||
Sbjct: 182 gttacggtgaacccagcaatggtcattggtcccctgctgcagccttcactgaatactagt 241
Query: 720 gctgaagcaatcctgaagttaatcaatgggtcatcgtctacatatcccaatttttgcttt 779
||||||||||| |||||| |||||||||| ||||| || |||||||| ||||| |||||
Sbjct: 242 gctgaagcaattctgaagctaatcaatggatcatcctcgacatatcctaatttcagcttt 301
Query: 780 ggatgggttaatgtcaa-ggatgttgccctggcccatatccttgcatacgaggttcc 835
|| ||| | || || || |||||||||||||| |||||||||||||| || |||||
Sbjct: 302 ggctggataaacgttaagggatgttgccctggnacatatccttgcatatgaagttcc 358
>gb|C28940.1|C28940 C28940 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C62895_1A, mRNA sequence
Length = 440
Score = 264 bits (133), Expect = 1e-067
Identities = 338/404 (83%), Gaps = 3/404 (0%)
Strand = Plus / Plus
Query: 447 tgcaagaaagcttctattaaaaaggtggttgtaacatcatctatggctgctgtagcctac 506
|||||||||||||| |||| || || | || |||||||| ||||||||||| ||||||
Sbjct: 6 tgcaagaaagcttccattagaagagttatcgtgacatcatccatggctgctgttgcctac 65
Query: 507 aacgggaggccaaggactcctgaggtcacagttgacgagacatggttttctgatccacaa 566
|| |||| ||||| |||||||| || ||||| |||||||||||||| | |||| |
Sbjct: 66 aatgggaaaccaagaactcctgatgtagttgttgatgagacatggttttcagttccagag 125
Query: 567 atttgtgaaacaaatcagcaatggtatattttgtccaagacgctggcagaggaggctgct 626
|||||||||| |||||||||||||| || |||||||||| || |||||||||||||||
Sbjct: 126 atttgtgaaaagcatcagcaatggtatgttctgtccaagaccctagcagaggaggctgct 185
Query: 627 tggaagttctcaagggataatggacttgaaatcgttactataaacccagcgatggttatt 686
|||||||| |||| ||||||||| ||||||| ||||| | |||||||| ||||| |||
Sbjct: 186 tggaagttttcaaaagataatggatttgaaatagttacggtgaacccagcaatggtcatt 245
Query: 687 ggtcccctgctgcagcctacactaaataccagtgctgaagcaatcctgaagttaatcaat 746
|||||||||||||||||| |||| ||||| |||||||||||||| |||||| ||||||||
Sbjct: 246 ggtcccctgctgcagccttcactgaatactagtgctgaagcaattctgaagctaatcaat 305
Query: 747 gggtcatcgtctacatatcccaatttttgcttt-ggatgggttaa--tgtcaaggatgtt 803
|| ||||| || |||||||| ||||| ||||| || |||| ||| || | |||||||
Sbjct: 306 ggatcatcctcgacatatcctaatttcagctttgggctgggataaacggtaagggatgtt 365
Query: 804 gccctggcccatatccttgcatacgaggttccctcatcaaatgg 847
|||||| |||||||||||||| || ||||||||| |||||||
Sbjct: 366 tccctgggacatatccttgcatatgaagttccctcagcaaatgg 409
>gb|AU067975.1|AU067975 AU067975 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C11360_12Z, mRNA sequence
Length = 627
Score = 240 bits (121), Expect = 2e-060
Identities = 326/394 (82%), Gaps = 1/394 (0%)
Strand = Plus / Plus
Query: 671 cccagcgatggttattggtcccctgctgcagcctacactaaataccagtgctgaagcaat 730
|||||| ||| | ||||||||||||||||||||| |||| ||| | ||||||||||||||
Sbjct: 43 cccagcaatgntcattggtcccctgctgcagccttcactgaatnctagtgctgaagcaat 102
Query: 731 cctgaagttaatc-aatgggtcatcgtctacatatcccaatttttgctttggatgggtta 789
|||||| ||||| ||||| ||||| || |||||||| ||||| ||||||| ||| | |
Sbjct: 103 tctgaagctaatccaatggatcatcctcgacatatcctaatttcagctttggctggataa 162
Query: 790 atgtcaaggatgttgccctggcccatatccttgcatacgaggttccctcatcaaatggaa 849
|| ||||||||||||||||| |||||||||||||| || ||||| ||| |||||||||
Sbjct: 163 ncgttaaggatgttgccctggcacatatccttgcatatgaagttccttcagcaaatggaa 222
Query: 850 ggtactgcatggtggaaagagttgttcactactcagaactggtgaacattatccgcaaca 909
| || |||||||| |||||||||| ||||||||||| || || | || || || | |
Sbjct: 223 gatattgcatggttgaaagagttgcgcactactcagagctcgtccaaatcattcgtgaga 282
Query: 910 tgtatcctacccttcctcttccggacaagtgtgcagatgacaagccgtttgtcccaccct 969
||||||| | ||||||| || ||||||||||||||||||||||| | || ||| ||
Sbjct: 283 tgtatcccaatattcctctgccagacaagtgtgcagatgacaagccatcagtgccaatct 342
Query: 970 accaagtatcaaaggagaagataaaaagcataggcatcgagttgattccactggagacga 1029
|||| ||||||||||| |||||||||||| | ||| | || ||| ||| ||| | ||||
Sbjct: 343 accaggtatcaaaggaaaagataaaaagcttgggcctggaactgactcccctgcacacga 402
Query: 1030 gcgtcaaggagaccatcgaaagcttgaaagagaa 1063
|| |||||||||||||||| ||||||||||||||
Sbjct: 403 gcatcaaggagaccatcgagagcttgaaagagaa 436
>gb|CB645628.1|CB645628 OSJNEb07H08.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb07H08 3', mRNA sequence
Length = 581
Score = 224 bits (113), Expect = 9e-056
Identities = 401/497 (80%)
Strand = Plus / Minus
Query: 567 atttgtgaaacaaatcagcaatggtatattttgtccaagacgctggcagaggaggctgct 626
|||||||||| |||||||||||||| || |||||||| | || |||||||||| ||||
Sbjct: 569 atttgtgaaaagcatcagcaatggtatgttctgtccaagtccctagcagaggaggatgct 510
Query: 627 tggaagttctcaagggataatggacttgaaatcgttactataaacccagcgatggttatt 686
|||||||| |||| ||||||||| ||||||| | ||| | | |||||| ||||| |||
Sbjct: 509 tggaagttttcaaaagataatggatttgaaatagctacggtgaccccagcaatggtcatt 450
Query: 687 ggtcccctgctgcagcctacactaaataccagtgctgaagcaatcctgaagttaatcaat 746
||||||||| |||| ||| || | ||||| |||||||||||||| |||||| ||||||||
Sbjct: 449 ggtcccctgatgcatccttcaatgaatactagtgctgaagcaattctgaagctaatcaat 390
Query: 747 gggtcatcgtctacatatcccaatttttgctttggatgggttaatgtcaaggatgttgcc 806
|| ||||| || ||||||| ||||| |||||| ||| | | || ||||||||||||
Sbjct: 389 ggatcatcctcgacatatcgtaatttcacctttggctggataaccgttaaggatgttgcc 330
Query: 807 ctggcccatatccttgcatacgaggttccctcatcaaatggaaggtactgcatggtggaa 866
||||| |||||||||||||| || ||||| ||| |||||||||| || |||| | | |||
Sbjct: 329 ctggcacatatccttgcatatgaagttccttcagcaaatggaagatattgcacgtttgaa 270
Query: 867 agagttgttcactactcagaactggtgaacattatccgcaacatgtatcctacccttcct 926
||||||| ||||||||||| || || | || || ||| | | |||||| | |||||
Sbjct: 269 agagttgcgcactactcagagctcgtccaaatcattcgcgagacgtatcccaatattcct 210
Query: 927 cttccggacaagtgtgcagatgacaagccgtttgtcccaccctaccaagtatcaaaggag 986
| || ||||||||||||||||||||||| | || ||| |||||| |||||||||||
Sbjct: 209 gtgccagacaagtgtgcagatgacaagccatcagtgccaatctaccaggtatcaaaggaa 150
Query: 987 aagataaaaagcataggcatcgagttgattccactggagacgagcgtcaaggagaccatc 1046
|||||| ||||| | | | | || |||||| ||| | |||||| |||||||| ||||
Sbjct: 149 aagatacaaagcttggccctggaagagattcccctgcacacgagcatcaaggagcccatt 90
Query: 1047 gaaagcttgaaagagaa 1063
|| ||||||||||||||
Sbjct: 89 gagagcttgaaagagaa 73
>gb|AU165252.1|AU165252 AU165252 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C62895, mRNA sequence
Length = 585
Score = 218 bits (110), Expect = 6e-054
Identities = 322/389 (82%), Gaps = 3/389 (0%)
Strand = Plus / Plus
Query: 678 atggttattggtcccctgctgca-gcctacacta-aataccagtgctgaagcaatcctga 735
||||| ||||||||||||||||| |||| |||| ||||| |||| ||||||||| ||||
Sbjct: 6 atggtcattggtcccctgctgcaagccttcacttgaatactagtgntgaagcaattctga 65
Query: 736 agttaatcaatgggtcatcgtct-acatatcccaatttttgctttggatgggttaatgtc 794
|| |||||||||| ||||| || |||||||| ||||| ||||||| ||| | || ||
Sbjct: 66 agctaatcaatggatcatcctcggacatatcctaatttcagctttggctggataaacgtt 125
Query: 795 aaggatgttgccctggcccatatccttgcatacgaggttccctcatcaaatggaaggtac 854
||||||||||||||||| |||||||||||||| || ||||| ||| |||||||||| ||
Sbjct: 126 aaggatgttgccctggcacatatccttgcatatgaagttccttcagcaaatggaagatat 185
Query: 855 tgcatggtggaaagagttgttcactactcagaactggtgaacattatccgcaacatgtat 914
|||||||| |||||||||| ||||||||||| || || | || || || | ||||||
Sbjct: 186 tgcatggttgaaagagttgcgcactactcagagctcgtccaaatcattcgtgagatgtat 245
Query: 915 cctacccttcctcttccggacaagtgtgcagatgacaagccgtttgtcccaccctaccaa 974
|| | ||||||| || ||||||||||||||||||||||| | || ||| ||||||
Sbjct: 246 cccaatattcctctgccagacaagtgtgcagatgacaagccatcagtgccaatctaccag 305
Query: 975 gtatcaaaggagaagataaaaagcataggcatcgagttgattccactggagacgagcgtc 1034
||||||||||| |||||||||||| | ||| | || ||| ||| ||| | |||||| ||
Sbjct: 306 gtatcaaaggaaaagataaaaagcttgggcctggaactgactcccctgcacacgagcatc 365
Query: 1035 aaggagaccatcgaaagcttgaaagagaa 1063
|||||||||||||| ||||||||||||||
Sbjct: 366 aaggagaccatcgagagcttgaaagagaa 394
>gb|CF280693.1|CF280693 14ETL--07-H12.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--07-H12, mRNA sequence
Length = 576
Score = 214 bits (108), Expect = 9e-053
Identities = 339/415 (81%), Gaps = 1/415 (0%)
Strand = Plus / Plus
Query: 114 gggacggggaaggtggtgtgcgtcaccggcgcatcagggtacatcgcgtcctggattgtc 173
||||| |||||| ||||||||||||||||||| || |||||||||||||| ||| | |||
Sbjct: 162 gggaccgggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtc 221
Query: 174 aggctcctcctcgaccgcggctacaccgtccgcgccaccgtgcgagacaccgctgaccca 233
||||| ||||||| |||||||||||| |||||||||||| | || |||||| ||||||||
Sbjct: 222 aggctgctcctcgcccgcggctacacggtccgcgccaccatccgggacacctctgaccca 281
Query: 234 aagaaaacattgcacctgactgcgttggatggtgctaaggataggctgcacttatttaaa 293
||||||||| | |||||| ||| ||||||| || || || || || || || || ||
Sbjct: 282 aagaaaacactacacctgcgtgccctggatggagccaacgaaagactccatttgttcgaa 341
Query: 294 gctagcctgctagaagagggttctttcgatgctgcagttcatggat-gcgacactgtatt 352
|| | ||||| |||||||| |||||||||||||| || |||| | | || ||| ||
Sbjct: 342 gcaaatctgctggaagagggctctttcgatgctgcggtcaatggttggtgattgtgtttt 401
Query: 353 tcatactgcctctcccttttatcacaatgtcaaggatgctaaggcagagttacttgaccc 412
||||| || ||||||||||| |||||||| || ||| ||||||| ||||||||||||||
Sbjct: 402 ccatacggcttctcccttttaccacaatgttaaagatcctaaggctgagttacttgaccc 461
Query: 413 agcagttaagggaacactcaatgttctcggttcatgcaagaaagcttctattaaaaaggt 472
||||| || ||||| || |||||||| || || ||||||| |||||| |||| || ||
Sbjct: 462 tgcagtcaaaggaacccttaatgttctaggctcctgcaaganagcttccattagaagagt 521
Query: 473 ggttgtaacatcatctatggctgctgtagcctacaacgggaggccaaggactcct 527
| || |||||||| ||||||||||| |||||||| |||| ||||| ||||||
Sbjct: 522 tatcgtgacatcatccatggctgctgttgcctacaatgggaaaccaagaactcct 576
>gb|CF330329.1|CF330329 NACL--05-P23.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--05-P23, mRNA sequence
Length = 632
Score = 206 bits (104), Expect = 2e-050
Identities = 338/416 (81%)
Strand = Plus / Plus
Query: 114 gggacggggaaggtggtgtgcgtcaccggcgcatcagggtacatcgcgtcctggattgtc 173
||||| |||||| || |||| ||||||||||| || |||||||||||||| ||| | |||
Sbjct: 203 gggaccgggaagctgttgtgtgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtc 262
Query: 174 aggctcctcctcgaccgcggctacaccgtccgcgccaccgtgcgagacaccgctgaccca 233
||||| ||||||| |||||||||||| |||||||||||| | || |||||| ||||||||
Sbjct: 263 aggctgctcctcgcccgcggctacacggtccgcgccaccatccgggacacctctgaccca 322
Query: 234 aagaaaacattgcacctgactgcgttggatggtgctaaggataggctgcacttatttaaa 293
||||||||| | |||||| ||| ||||||| || || || || || || || || ||
Sbjct: 323 aagaaaacactacacctgcgtgccctggatggagccaacgaaagactccatttgttcgaa 382
Query: 294 gctagcctgctagaagagggttctttcgatgctgcagttcatggatgcgacactgtattt 353
|| | ||||| |||||||| |||||||||||||| || | || || || ||| ||
Sbjct: 383 gcaaatctgctggaagagggctctttcgatgctgcggtcaaaggttgtgattgtgttttc 442
Query: 354 catactgcctctcccttttatcacaatgtcaaggatgctaaggcagagttacttgaccca 413
||||| || ||||||||||| |||||||| || ||| ||||||| |||||||| |||||
Sbjct: 443 catacggcttctcccttttaccacaatgttaaagatcctaaggctgagttactcgaccct 502
Query: 414 gcagttaagggaacactcaatgttctcggttcatgcaagaaagcttctattaaaaaggtg 473
||||| || ||||| || |||||||| || || |||||||||||||| |||| || ||
Sbjct: 503 gcagtcaaaggaacccttaatgttctaggctcctgcaagaaagcttccattagaagagtt 562
Query: 474 gttgtaacatcatctatggctgctgtagcctacaacgggaggccaaggactcctga 529
| || |||||||| ||||||||||| |||||||| |||| ||||| ||||||||
Sbjct: 563 atcgtgacatcatccatggctgctgttgcctacaatgggaaaccaagaactcctga 618
>gb|AU056682.1|AU056682 AU056682 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S20782_2Z, mRNA sequence
Length = 529
Score = 182 bits (92), Expect = 3e-043
Identities = 278/341 (81%)
Strand = Plus / Plus
Query: 723 gaagcaatcctgaagttaatcaatgggtcatcgtctacatatcccaatttttgctttgga 782
|||||||| || ||| |||||||||| ||||| || ||||| || ||||| |||||||
Sbjct: 1 gaagcaattctaaagctaatcaatggatcatcctcgacatancctaatttcagctttggc 60
Query: 783 tgggttaatgtcaaggatgttgccctggcccatatccttgcatacgaggttccctcatca 842
||| | || || ||||||||||||||||| |||| ||||||||| || ||||| ||| ||
Sbjct: 61 tggataaacgttaaggatgttgccctggcacatanccttgcatatgaagttccttcagca 120
Query: 843 aatggaaggtactgcatggtggaaagagttgttcactactcagaactggtgaacattatc 902
|||||||| || |||||||| |||||||||| ||||||||||| || || | || ||
Sbjct: 121 aatggaagatattgcatggttgaaagagttgcgcactactcagagctcgtccaaatcatt 180
Query: 903 cgcaacatgtatcctacccttcctcttccggacaagtgtgcagatgacaagccgtttgtc 962
|| | |||||||| | ||||||| || ||||||||||||||||||||||| | ||
Sbjct: 181 cgtgagatgtatcccaatattcctctgccagacaagtgtgcagatgacaagccatcagtg 240
Query: 963 ccaccctaccaagtatcaaaggagaagataaaaagcataggcatcgagttgattccactg 1022
||| |||||| |||||||||| |||||||||||| | ||| | || ||| ||| |||
Sbjct: 241 ccaatctaccaggtatcaaaggnaaagataaaaagcttgggcctggaactgactcccctg 300
Query: 1023 gagacgagcgtcaaggagaccatcgaaagcttgaaagagaa 1063
| |||||| |||||||||||||||| ||||||||||||||
Sbjct: 301 cacacgagcatcaaggagaccatcgagagcttgaaagagaa 341
>gb|AACV01001386.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001386, whole
genome shotgun sequence
Length = 46394
Score = 182 bits (92), Expect = 3e-043
Identities = 149/168 (88%)
Strand = Plus / Plus
Query: 581 tcagcaatggtatattttgtccaagacgctggcagaggaggctgcttggaagttctcaag 640
||||||||||||| || |||||||||| || ||||||||||||||||||||||| ||||
Sbjct: 34730 tcagcaatggtatgttctgtccaagaccctagcagaggaggctgcttggaagttttcaaa 34789
Query: 641 ggataatggacttgaaatcgttactataaacccagcgatggttattggtcccctgctgca 700
||||||||| ||||||| ||||| | |||||||| ||||| |||||||||||||||||
Sbjct: 34790 agataatggatttgaaatagttacggtgaacccagcaatggtcattggtcccctgctgca 34849
Query: 701 gcctacactaaataccagtgctgaagcaatcctgaagttaatcaatgg 748
|||| |||| ||||| |||||||||||||| |||||| ||||||||||
Sbjct: 34850 gccttcactgaatactagtgctgaagcaattctgaagctaatcaatgg 34897
Score = 117 bits (59), Expect = 2e-023
Identities = 89/99 (89%)
Strand = Plus / Plus
Query: 114 gggacggggaaggtggtgtgcgtcaccggcgcatcagggtacatcgcgtcctggattgtc 173
||||| |||||| ||||||||||||||||||| || |||||||||||||| ||| | |||
Sbjct: 32149 gggaccgggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtc 32208
Query: 174 aggctcctcctcgaccgcggctacaccgtccgcgccacc 212
||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 32209 aggctgctcctcgcccgcggctacacggtccgcgccacc 32247
Score = 113 bits (57), Expect = 2e-022
Identities = 117/137 (85%)
Strand = Plus / Plus
Query: 750 tcatcgtctacatatcccaatttttgctttggatgggttaatgtcaaggatgttgccctg 809
||||| || |||||||| ||||| ||||||| ||| | || || |||||||||||||||
Sbjct: 35659 tcatcctcgacatatcctaatttcagctttggctggataaacgttaaggatgttgccctg 35718
Query: 810 gcccatatccttgcatacgaggttccctcatcaaatggaaggtactgcatggtggaaaga 869
|| |||||||||||||| || ||||| ||| |||||||||| || |||||||| ||||||
Sbjct: 35719 gcacatatccttgcatatgaagttccttcagcaaatggaagatattgcatggttgaaaga 35778
Query: 870 gttgttcactactcaga 886
|||| |||||||||||
Sbjct: 35779 gttgcgcactactcaga 35795
Score = 101 bits (51), Expect = 9e-019
Identities = 150/183 (81%)
Strand = Plus / Plus
Query: 394 aggcagagttacttgacccagcagttaagggaacactcaatgttctcggttcatgcaaga 453
|||| |||||||||||||| ||||| || ||||| || |||||||| || || |||||||
Sbjct: 33537 aggctgagttacttgaccctgcagtcaaaggaacccttaatgttctaggctcctgcaaga 33596
Query: 454 aagcttctattaaaaaggtggttgtaacatcatctatggctgctgtagcctacaacggga 513
||||||| |||| || || | || |||||||| ||||||||||| |||||||| ||||
Sbjct: 33597 aagcttccattagaagagttatcgtgacatcatccatggctgctgttgcctacaatggga 33656
Query: 514 ggccaaggactcctgaggtcacagttgacgagacatggttttctgatccacaaatttgtg 573
||||| |||||||| || ||||| |||||||||||||| | |||| | |||||||
Sbjct: 33657 aaccaagaactcctgatgtagttgttgatgagacatggttttcagttccagagatttgtg 33716
Query: 574 aaa 576
|||
Sbjct: 33717 aaa 33719
Score = 91.7 bits (46), Expect = 9e-016
Identities = 106/126 (84%)
Strand = Plus / Plus
Query: 938 gtgtgcagatgacaagccgtttgtcccaccctaccaagtatcaaaggagaagataaaaag 997
|||||||||||||||||| | || ||| |||||| ||||||||||| |||||||||||
Sbjct: 36080 gtgtgcagatgacaagccatcagtgccaatctaccaggtatcaaaggaaaagataaaaag 36139
Query: 998 cataggcatcgagttgattccactggagacgagcgtcaaggagaccatcgaaagcttgaa 1057
| | ||| | || ||| ||| ||| | |||||| |||||||||||||||| ||||||||
Sbjct: 36140 cttgggcctggaactgactcccctgcacacgagcatcaaggagaccatcgagagcttgaa 36199
Query: 1058 agagaa 1063
||||||
Sbjct: 36200 agagaa 36205
Score = 50.1 bits (25), Expect = 0.003
Identities = 79/97 (81%)
Strand = Plus / Plus
Query: 300 ctgctagaagagggttctttcgatgctgcagttcatggatgcgacactgtatttcatact 359
||||| |||||||| |||||||||||||| || |||| || || ||| || |||||
Sbjct: 32728 ctgctggaagagggctctttcgatgctgcggtcaatggttgtgattgtgttttccatacg 32787
Query: 360 gcctctcccttttatcacaatgtcaaggatgctaagg 396
|| ||||||||||| |||||||| || ||| ||||||
Sbjct: 32788 gcttctcccttttaccacaatgttaaagatcctaagg 32824
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 182 bits (92), Expect = 3e-043
Identities = 149/168 (88%)
Strand = Plus / Plus
Query: 581 tcagcaatggtatattttgtccaagacgctggcagaggaggctgcttggaagttctcaag 640
||||||||||||| || |||||||||| || ||||||||||||||||||||||| ||||
Sbjct: 19087316 tcagcaatggtatgttctgtccaagaccctagcagaggaggctgcttggaagttttcaaa 19087375
Query: 641 ggataatggacttgaaatcgttactataaacccagcgatggttattggtcccctgctgca 700
||||||||| ||||||| ||||| | |||||||| ||||| |||||||||||||||||
Sbjct: 19087376 agataatggatttgaaatagttacggtgaacccagcaatggtcattggtcccctgctgca 19087435
Query: 701 gcctacactaaataccagtgctgaagcaatcctgaagttaatcaatgg 748
|||| |||| ||||| |||||||||||||| |||||| ||||||||||
Sbjct: 19087436 gccttcactgaatactagtgctgaagcaattctgaagctaatcaatgg 19087483
Score = 117 bits (59), Expect = 2e-023
Identities = 89/99 (89%)
Strand = Plus / Plus
Query: 114 gggacggggaaggtggtgtgcgtcaccggcgcatcagggtacatcgcgtcctggattgtc 173
||||| |||||| ||||||||||||||||||| || |||||||||||||| ||| | |||
Sbjct: 19084735 gggaccgggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtc 19084794
Query: 174 aggctcctcctcgaccgcggctacaccgtccgcgccacc 212
||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 19084795 aggctgctcctcgcccgcggctacacggtccgcgccacc 19084833
Score = 113 bits (57), Expect = 2e-022
Identities = 117/137 (85%)
Strand = Plus / Plus
Query: 750 tcatcgtctacatatcccaatttttgctttggatgggttaatgtcaaggatgttgccctg 809
||||| || |||||||| ||||| ||||||| ||| | || || |||||||||||||||
Sbjct: 19088245 tcatcctcgacatatcctaatttcagctttggctggataaacgttaaggatgttgccctg 19088304
Query: 810 gcccatatccttgcatacgaggttccctcatcaaatggaaggtactgcatggtggaaaga 869
|| |||||||||||||| || ||||| ||| |||||||||| || |||||||| ||||||
Sbjct: 19088305 gcacatatccttgcatatgaagttccttcagcaaatggaagatattgcatggttgaaaga 19088364
Query: 870 gttgttcactactcaga 886
|||| |||||||||||
Sbjct: 19088365 gttgcgcactactcaga 19088381
Score = 101 bits (51), Expect = 9e-019
Identities = 150/183 (81%)
Strand = Plus / Plus
Query: 394 aggcagagttacttgacccagcagttaagggaacactcaatgttctcggttcatgcaaga 453
|||| |||||||||||||| ||||| || ||||| || |||||||| || || |||||||
Sbjct: 19086123 aggctgagttacttgaccctgcagtcaaaggaacccttaatgttctaggctcctgcaaga 19086182
Query: 454 aagcttctattaaaaaggtggttgtaacatcatctatggctgctgtagcctacaacggga 513
||||||| |||| || || | || |||||||| ||||||||||| |||||||| ||||
Sbjct: 19086183 aagcttccattagaagagttatcgtgacatcatccatggctgctgttgcctacaatggga 19086242
Query: 514 ggccaaggactcctgaggtcacagttgacgagacatggttttctgatccacaaatttgtg 573
||||| |||||||| || ||||| |||||||||||||| | |||| | |||||||
Sbjct: 19086243 aaccaagaactcctgatgtagttgttgatgagacatggttttcagttccagagatttgtg 19086302
Query: 574 aaa 576
|||
Sbjct: 19086303 aaa 19086305
Score = 91.7 bits (46), Expect = 9e-016
Identities = 106/126 (84%)
Strand = Plus / Plus
Query: 938 gtgtgcagatgacaagccgtttgtcccaccctaccaagtatcaaaggagaagataaaaag 997
|||||||||||||||||| | || ||| |||||| ||||||||||| |||||||||||
Sbjct: 19088666 gtgtgcagatgacaagccatcagtgccaatctaccaggtatcaaaggaaaagataaaaag 19088725
Query: 998 cataggcatcgagttgattccactggagacgagcgtcaaggagaccatcgaaagcttgaa 1057
| | ||| | || ||| ||| ||| | |||||| |||||||||||||||| ||||||||
Sbjct: 19088726 cttgggcctggaactgactcccctgcacacgagcatcaaggagaccatcgagagcttgaa 19088785
Query: 1058 agagaa 1063
||||||
Sbjct: 19088786 agagaa 19088791
Score = 67.9 bits (34), Expect = 1e-008
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtccgcgccaccgt 214
|||||||||||||||||||||||||||| |||||||||
Sbjct: 35504992 ctcctcctcgaccgcggctacaccgtccacgccaccgt 35505029
Score = 50.1 bits (25), Expect = 0.003
Identities = 79/97 (81%)
Strand = Plus / Plus
Query: 300 ctgctagaagagggttctttcgatgctgcagttcatggatgcgacactgtatttcatact 359
||||| |||||||| |||||||||||||| || |||| || || ||| || |||||
Sbjct: 19085314 ctgctggaagagggctctttcgatgctgcggtcaatggttgtgattgtgttttccatacg 19085373
Query: 360 gcctctcccttttatcacaatgtcaaggatgctaagg 396
|| ||||||||||| |||||||| || ||| ||||||
Sbjct: 19085374 gcttctcccttttaccacaatgttaaagatcctaagg 19085410
Score = 46.1 bits (23), Expect = 0.048
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 191 cggctacaccgtccgcgccaccgtgcg 217
||||||||||||||||||||| |||||
Sbjct: 25457732 cggctacaccgtccgcgccacagtgcg 25457758
>ref|NT_079926.2| Oryza sativa (japonica cultivar-group)
Length = 8469246
Score = 182 bits (92), Expect = 3e-043
Identities = 149/168 (88%)
Strand = Plus / Plus
Query: 581 tcagcaatggtatattttgtccaagacgctggcagaggaggctgcttggaagttctcaag 640
||||||||||||| || |||||||||| || ||||||||||||||||||||||| ||||
Sbjct: 2005548 tcagcaatggtatgttctgtccaagaccctagcagaggaggctgcttggaagttttcaaa 2005607
Query: 641 ggataatggacttgaaatcgttactataaacccagcgatggttattggtcccctgctgca 700
||||||||| ||||||| ||||| | |||||||| ||||| |||||||||||||||||
Sbjct: 2005608 agataatggatttgaaatagttacggtgaacccagcaatggtcattggtcccctgctgca 2005667
Query: 701 gcctacactaaataccagtgctgaagcaatcctgaagttaatcaatgg 748
|||| |||| ||||| |||||||||||||| |||||| ||||||||||
Sbjct: 2005668 gccttcactgaatactagtgctgaagcaattctgaagctaatcaatgg 2005715
Score = 117 bits (59), Expect = 2e-023
Identities = 89/99 (89%)
Strand = Plus / Plus
Query: 114 gggacggggaaggtggtgtgcgtcaccggcgcatcagggtacatcgcgtcctggattgtc 173
||||| |||||| ||||||||||||||||||| || |||||||||||||| ||| | |||
Sbjct: 2002967 gggaccgggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtc 2003026
Query: 174 aggctcctcctcgaccgcggctacaccgtccgcgccacc 212
||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 2003027 aggctgctcctcgcccgcggctacacggtccgcgccacc 2003065
Score = 113 bits (57), Expect = 2e-022
Identities = 117/137 (85%)
Strand = Plus / Plus
Query: 750 tcatcgtctacatatcccaatttttgctttggatgggttaatgtcaaggatgttgccctg 809
||||| || |||||||| ||||| ||||||| ||| | || || |||||||||||||||
Sbjct: 2006477 tcatcctcgacatatcctaatttcagctttggctggataaacgttaaggatgttgccctg 2006536
Query: 810 gcccatatccttgcatacgaggttccctcatcaaatggaaggtactgcatggtggaaaga 869
|| |||||||||||||| || ||||| ||| |||||||||| || |||||||| ||||||
Sbjct: 2006537 gcacatatccttgcatatgaagttccttcagcaaatggaagatattgcatggttgaaaga 2006596
Query: 870 gttgttcactactcaga 886
|||| |||||||||||
Sbjct: 2006597 gttgcgcactactcaga 2006613
Score = 101 bits (51), Expect = 9e-019
Identities = 150/183 (81%)
Strand = Plus / Plus
Query: 394 aggcagagttacttgacccagcagttaagggaacactcaatgttctcggttcatgcaaga 453
|||| |||||||||||||| ||||| || ||||| || |||||||| || || |||||||
Sbjct: 2004355 aggctgagttacttgaccctgcagtcaaaggaacccttaatgttctaggctcctgcaaga 2004414
Query: 454 aagcttctattaaaaaggtggttgtaacatcatctatggctgctgtagcctacaacggga 513
||||||| |||| || || | || |||||||| ||||||||||| |||||||| ||||
Sbjct: 2004415 aagcttccattagaagagttatcgtgacatcatccatggctgctgttgcctacaatggga 2004474
Query: 514 ggccaaggactcctgaggtcacagttgacgagacatggttttctgatccacaaatttgtg 573
||||| |||||||| || ||||| |||||||||||||| | |||| | |||||||
Sbjct: 2004475 aaccaagaactcctgatgtagttgttgatgagacatggttttcagttccagagatttgtg 2004534
Query: 574 aaa 576
|||
Sbjct: 2004535 aaa 2004537
Score = 91.7 bits (46), Expect = 9e-016
Identities = 106/126 (84%)
Strand = Plus / Plus
Query: 938 gtgtgcagatgacaagccgtttgtcccaccctaccaagtatcaaaggagaagataaaaag 997
|||||||||||||||||| | || ||| |||||| ||||||||||| |||||||||||
Sbjct: 2006898 gtgtgcagatgacaagccatcagtgccaatctaccaggtatcaaaggaaaagataaaaag 2006957
Query: 998 cataggcatcgagttgattccactggagacgagcgtcaaggagaccatcgaaagcttgaa 1057
| | ||| | || ||| ||| ||| | |||||| |||||||||||||||| ||||||||
Sbjct: 2006958 cttgggcctggaactgactcccctgcacacgagcatcaaggagaccatcgagagcttgaa 2007017
Query: 1058 agagaa 1063
||||||
Sbjct: 2007018 agagaa 2007023
Score = 50.1 bits (25), Expect = 0.003
Identities = 79/97 (81%)
Strand = Plus / Plus
Query: 300 ctgctagaagagggttctttcgatgctgcagttcatggatgcgacactgtatttcatact 359
||||| |||||||| |||||||||||||| || |||| || || ||| || |||||
Sbjct: 2003546 ctgctggaagagggctctttcgatgctgcggtcaatggttgtgattgtgttttccatacg 2003605
Query: 360 gcctctcccttttatcacaatgtcaaggatgctaagg 396
|| ||||||||||| |||||||| || ||| ||||||
Sbjct: 2003606 gcttctcccttttaccacaatgttaaagatcctaagg 2003642
Score = 46.1 bits (23), Expect = 0.048
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 191 cggctacaccgtccgcgccaccgtgcg 217
||||||||||||||||||||| |||||
Sbjct: 8375964 cggctacaccgtccgcgccacagtgcg 8375990
>dbj|AP003370.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1129H01
Length = 101104
Score = 182 bits (92), Expect = 3e-043
Identities = 149/168 (88%)
Strand = Plus / Plus
Query: 581 tcagcaatggtatattttgtccaagacgctggcagaggaggctgcttggaagttctcaag 640
||||||||||||| || |||||||||| || ||||||||||||||||||||||| ||||
Sbjct: 65642 tcagcaatggtatgttctgtccaagaccctagcagaggaggctgcttggaagttttcaaa 65701
Query: 641 ggataatggacttgaaatcgttactataaacccagcgatggttattggtcccctgctgca 700
||||||||| ||||||| ||||| | |||||||| ||||| |||||||||||||||||
Sbjct: 65702 agataatggatttgaaatagttacggtgaacccagcaatggtcattggtcccctgctgca 65761
Query: 701 gcctacactaaataccagtgctgaagcaatcctgaagttaatcaatgg 748
|||| |||| ||||| |||||||||||||| |||||| ||||||||||
Sbjct: 65762 gccttcactgaatactagtgctgaagcaattctgaagctaatcaatgg 65809
Score = 117 bits (59), Expect = 2e-023
Identities = 89/99 (89%)
Strand = Plus / Plus
Query: 114 gggacggggaaggtggtgtgcgtcaccggcgcatcagggtacatcgcgtcctggattgtc 173
||||| |||||| ||||||||||||||||||| || |||||||||||||| ||| | |||
Sbjct: 63061 gggaccgggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtc 63120
Query: 174 aggctcctcctcgaccgcggctacaccgtccgcgccacc 212
||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 63121 aggctgctcctcgcccgcggctacacggtccgcgccacc 63159
Score = 113 bits (57), Expect = 2e-022
Identities = 117/137 (85%)
Strand = Plus / Plus
Query: 750 tcatcgtctacatatcccaatttttgctttggatgggttaatgtcaaggatgttgccctg 809
||||| || |||||||| ||||| ||||||| ||| | || || |||||||||||||||
Sbjct: 66571 tcatcctcgacatatcctaatttcagctttggctggataaacgttaaggatgttgccctg 66630
Query: 810 gcccatatccttgcatacgaggttccctcatcaaatggaaggtactgcatggtggaaaga 869
|| |||||||||||||| || ||||| ||| |||||||||| || |||||||| ||||||
Sbjct: 66631 gcacatatccttgcatatgaagttccttcagcaaatggaagatattgcatggttgaaaga 66690
Query: 870 gttgttcactactcaga 886
|||| |||||||||||
Sbjct: 66691 gttgcgcactactcaga 66707
Score = 101 bits (51), Expect = 9e-019
Identities = 150/183 (81%)
Strand = Plus / Plus
Query: 394 aggcagagttacttgacccagcagttaagggaacactcaatgttctcggttcatgcaaga 453
|||| |||||||||||||| ||||| || ||||| || |||||||| || || |||||||
Sbjct: 64449 aggctgagttacttgaccctgcagtcaaaggaacccttaatgttctaggctcctgcaaga 64508
Query: 454 aagcttctattaaaaaggtggttgtaacatcatctatggctgctgtagcctacaacggga 513
||||||| |||| || || | || |||||||| ||||||||||| |||||||| ||||
Sbjct: 64509 aagcttccattagaagagttatcgtgacatcatccatggctgctgttgcctacaatggga 64568
Query: 514 ggccaaggactcctgaggtcacagttgacgagacatggttttctgatccacaaatttgtg 573
||||| |||||||| || ||||| |||||||||||||| | |||| | |||||||
Sbjct: 64569 aaccaagaactcctgatgtagttgttgatgagacatggttttcagttccagagatttgtg 64628
Query: 574 aaa 576
|||
Sbjct: 64629 aaa 64631
Score = 91.7 bits (46), Expect = 9e-016
Identities = 106/126 (84%)
Strand = Plus / Plus
Query: 938 gtgtgcagatgacaagccgtttgtcccaccctaccaagtatcaaaggagaagataaaaag 997
|||||||||||||||||| | || ||| |||||| ||||||||||| |||||||||||
Sbjct: 66992 gtgtgcagatgacaagccatcagtgccaatctaccaggtatcaaaggaaaagataaaaag 67051
Query: 998 cataggcatcgagttgattccactggagacgagcgtcaaggagaccatcgaaagcttgaa 1057
| | ||| | || ||| ||| ||| | |||||| |||||||||||||||| ||||||||
Sbjct: 67052 cttgggcctggaactgactcccctgcacacgagcatcaaggagaccatcgagagcttgaa 67111
Query: 1058 agagaa 1063
||||||
Sbjct: 67112 agagaa 67117
Score = 50.1 bits (25), Expect = 0.003
Identities = 79/97 (81%)
Strand = Plus / Plus
Query: 300 ctgctagaagagggttctttcgatgctgcagttcatggatgcgacactgtatttcatact 359
||||| |||||||| |||||||||||||| || |||| || || ||| || |||||
Sbjct: 63640 ctgctggaagagggctctttcgatgctgcggtcaatggttgtgattgtgttttccatacg 63699
Query: 360 gcctctcccttttatcacaatgtcaaggatgctaagg 396
|| ||||||||||| |||||||| || ||| ||||||
Sbjct: 63700 gcttctcccttttaccacaatgttaaagatcctaagg 63736
>gb|CH401166.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000003 genomic
scaffold, whole genome shotgun sequence
Length = 8539496
Score = 182 bits (92), Expect = 3e-043
Identities = 149/168 (88%)
Strand = Plus / Plus
Query: 581 tcagcaatggtatattttgtccaagacgctggcagaggaggctgcttggaagttctcaag 640
||||||||||||| || |||||||||| || ||||||||||||||||||||||| ||||
Sbjct: 2097246 tcagcaatggtatgttctgtccaagaccctagcagaggaggctgcttggaagttttcaaa 2097305
Query: 641 ggataatggacttgaaatcgttactataaacccagcgatggttattggtcccctgctgca 700
||||||||| ||||||| ||||| | |||||||| ||||| |||||||||||||||||
Sbjct: 2097306 agataatggatttgaaatagttacggtgaacccagcaatggtcattggtcccctgctgca 2097365
Query: 701 gcctacactaaataccagtgctgaagcaatcctgaagttaatcaatgg 748
|||| |||| ||||| |||||||||||||| |||||| ||||||||||
Sbjct: 2097366 gccttcactgaatactagtgctgaagcaattctgaagctaatcaatgg 2097413
Score = 117 bits (59), Expect = 2e-023
Identities = 89/99 (89%)
Strand = Plus / Plus
Query: 114 gggacggggaaggtggtgtgcgtcaccggcgcatcagggtacatcgcgtcctggattgtc 173
||||| |||||| ||||||||||||||||||| || |||||||||||||| ||| | |||
Sbjct: 2094665 gggaccgggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtc 2094724
Query: 174 aggctcctcctcgaccgcggctacaccgtccgcgccacc 212
||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 2094725 aggctgctcctcgcccgcggctacacggtccgcgccacc 2094763
Score = 113 bits (57), Expect = 2e-022
Identities = 117/137 (85%)
Strand = Plus / Plus
Query: 750 tcatcgtctacatatcccaatttttgctttggatgggttaatgtcaaggatgttgccctg 809
||||| || |||||||| ||||| ||||||| ||| | || || |||||||||||||||
Sbjct: 2098175 tcatcctcgacatatcctaatttcagctttggctggataaacgttaaggatgttgccctg 2098234
Query: 810 gcccatatccttgcatacgaggttccctcatcaaatggaaggtactgcatggtggaaaga 869
|| |||||||||||||| || ||||| ||| |||||||||| || |||||||| ||||||
Sbjct: 2098235 gcacatatccttgcatatgaagttccttcagcaaatggaagatattgcatggttgaaaga 2098294
Query: 870 gttgttcactactcaga 886
|||| |||||||||||
Sbjct: 2098295 gttgcgcactactcaga 2098311
Score = 101 bits (51), Expect = 9e-019
Identities = 150/183 (81%)
Strand = Plus / Plus
Query: 394 aggcagagttacttgacccagcagttaagggaacactcaatgttctcggttcatgcaaga 453
|||| |||||||||||||| ||||| || ||||| || |||||||| || || |||||||
Sbjct: 2096053 aggctgagttacttgaccctgcagtcaaaggaacccttaatgttctaggctcctgcaaga 2096112
Query: 454 aagcttctattaaaaaggtggttgtaacatcatctatggctgctgtagcctacaacggga 513
||||||| |||| || || | || |||||||| ||||||||||| |||||||| ||||
Sbjct: 2096113 aagcttccattagaagagttatcgtgacatcatccatggctgctgttgcctacaatggga 2096172
Query: 514 ggccaaggactcctgaggtcacagttgacgagacatggttttctgatccacaaatttgtg 573
||||| |||||||| || ||||| |||||||||||||| | |||| | |||||||
Sbjct: 2096173 aaccaagaactcctgatgtagttgttgatgagacatggttttcagttccagagatttgtg 2096232
Query: 574 aaa 576
|||
Sbjct: 2096233 aaa 2096235
Score = 91.7 bits (46), Expect = 9e-016
Identities = 106/126 (84%)
Strand = Plus / Plus
Query: 938 gtgtgcagatgacaagccgtttgtcccaccctaccaagtatcaaaggagaagataaaaag 997
|||||||||||||||||| | || ||| |||||| ||||||||||| |||||||||||
Sbjct: 2098596 gtgtgcagatgacaagccatcagtgccaatctaccaggtatcaaaggaaaagataaaaag 2098655
Query: 998 cataggcatcgagttgattccactggagacgagcgtcaaggagaccatcgaaagcttgaa 1057
| | ||| | || ||| ||| ||| | |||||| |||||||||||||||| ||||||||
Sbjct: 2098656 cttgggcctggaactgactcccctgcacacgagcatcaaggagaccatcgagagcttgaa 2098715
Query: 1058 agagaa 1063
||||||
Sbjct: 2098716 agagaa 2098721
Score = 50.1 bits (25), Expect = 0.003
Identities = 79/97 (81%)
Strand = Plus / Plus
Query: 300 ctgctagaagagggttctttcgatgctgcagttcatggatgcgacactgtatttcatact 359
||||| |||||||| |||||||||||||| || |||| || || ||| || |||||
Sbjct: 2095244 ctgctggaagagggctctttcgatgctgcggtcaatggttgtgattgtgttttccatacg 2095303
Query: 360 gcctctcccttttatcacaatgtcaaggatgctaagg 396
|| ||||||||||| |||||||| || ||| ||||||
Sbjct: 2095304 gcttctcccttttaccacaatgttaaagatcctaagg 2095340
Score = 46.1 bits (23), Expect = 0.048
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 191 cggctacaccgtccgcgccaccgtgcg 217
||||||||||||||||||||| |||||
Sbjct: 8416914 cggctacaccgtccgcgccacagtgcg 8416940
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 182 bits (92), Expect = 3e-043
Identities = 149/168 (88%)
Strand = Plus / Plus
Query: 581 tcagcaatggtatattttgtccaagacgctggcagaggaggctgcttggaagttctcaag 640
||||||||||||| || |||||||||| || ||||||||||||||||||||||| ||||
Sbjct: 18722369 tcagcaatggtatgttctgtccaagaccctagcagaggaggctgcttggaagttttcaaa 18722428
Query: 641 ggataatggacttgaaatcgttactataaacccagcgatggttattggtcccctgctgca 700
||||||||| ||||||| ||||| | |||||||| ||||| |||||||||||||||||
Sbjct: 18722429 agataatggatttgaaatagttacggtgaacccagcaatggtcattggtcccctgctgca 18722488
Query: 701 gcctacactaaataccagtgctgaagcaatcctgaagttaatcaatgg 748
|||| |||| ||||| |||||||||||||| |||||| ||||||||||
Sbjct: 18722489 gccttcactgaatactagtgctgaagcaattctgaagctaatcaatgg 18722536
Score = 117 bits (59), Expect = 2e-023
Identities = 89/99 (89%)
Strand = Plus / Plus
Query: 114 gggacggggaaggtggtgtgcgtcaccggcgcatcagggtacatcgcgtcctggattgtc 173
||||| |||||| ||||||||||||||||||| || |||||||||||||| ||| | |||
Sbjct: 18719788 gggaccgggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtc 18719847
Query: 174 aggctcctcctcgaccgcggctacaccgtccgcgccacc 212
||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 18719848 aggctgctcctcgcccgcggctacacggtccgcgccacc 18719886
Score = 113 bits (57), Expect = 2e-022
Identities = 117/137 (85%)
Strand = Plus / Plus
Query: 750 tcatcgtctacatatcccaatttttgctttggatgggttaatgtcaaggatgttgccctg 809
||||| || |||||||| ||||| ||||||| ||| | || || |||||||||||||||
Sbjct: 18723298 tcatcctcgacatatcctaatttcagctttggctggataaacgttaaggatgttgccctg 18723357
Query: 810 gcccatatccttgcatacgaggttccctcatcaaatggaaggtactgcatggtggaaaga 869
|| |||||||||||||| || ||||| ||| |||||||||| || |||||||| ||||||
Sbjct: 18723358 gcacatatccttgcatatgaagttccttcagcaaatggaagatattgcatggttgaaaga 18723417
Query: 870 gttgttcactactcaga 886
|||| |||||||||||
Sbjct: 18723418 gttgcgcactactcaga 18723434
Score = 101 bits (51), Expect = 9e-019
Identities = 150/183 (81%)
Strand = Plus / Plus
Query: 394 aggcagagttacttgacccagcagttaagggaacactcaatgttctcggttcatgcaaga 453
|||| |||||||||||||| ||||| || ||||| || |||||||| || || |||||||
Sbjct: 18721176 aggctgagttacttgaccctgcagtcaaaggaacccttaatgttctaggctcctgcaaga 18721235
Query: 454 aagcttctattaaaaaggtggttgtaacatcatctatggctgctgtagcctacaacggga 513
||||||| |||| || || | || |||||||| ||||||||||| |||||||| ||||
Sbjct: 18721236 aagcttccattagaagagttatcgtgacatcatccatggctgctgttgcctacaatggga 18721295
Query: 514 ggccaaggactcctgaggtcacagttgacgagacatggttttctgatccacaaatttgtg 573
||||| |||||||| || ||||| |||||||||||||| | |||| | |||||||
Sbjct: 18721296 aaccaagaactcctgatgtagttgttgatgagacatggttttcagttccagagatttgtg 18721355
Query: 574 aaa 576
|||
Sbjct: 18721356 aaa 18721358
Score = 91.7 bits (46), Expect = 9e-016
Identities = 106/126 (84%)
Strand = Plus / Plus
Query: 938 gtgtgcagatgacaagccgtttgtcccaccctaccaagtatcaaaggagaagataaaaag 997
|||||||||||||||||| | || ||| |||||| ||||||||||| |||||||||||
Sbjct: 18723719 gtgtgcagatgacaagccatcagtgccaatctaccaggtatcaaaggaaaagataaaaag 18723778
Query: 998 cataggcatcgagttgattccactggagacgagcgtcaaggagaccatcgaaagcttgaa 1057
| | ||| | || ||| ||| ||| | |||||| |||||||||||||||| ||||||||
Sbjct: 18723779 cttgggcctggaactgactcccctgcacacgagcatcaaggagaccatcgagagcttgaa 18723838
Query: 1058 agagaa 1063
||||||
Sbjct: 18723839 agagaa 18723844
Score = 67.9 bits (34), Expect = 1e-008
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtccgcgccaccgt 214
|||||||||||||||||||||||||||| |||||||||
Sbjct: 34910393 ctcctcctcgaccgcggctacaccgtccacgccaccgt 34910430
Score = 50.1 bits (25), Expect = 0.003
Identities = 79/97 (81%)
Strand = Plus / Plus
Query: 300 ctgctagaagagggttctttcgatgctgcagttcatggatgcgacactgtatttcatact 359
||||| |||||||| |||||||||||||| || |||| || || ||| || |||||
Sbjct: 18720367 ctgctggaagagggctctttcgatgctgcggtcaatggttgtgattgtgttttccatacg 18720426
Query: 360 gcctctcccttttatcacaatgtcaaggatgctaagg 396
|| ||||||||||| |||||||| || ||| ||||||
Sbjct: 18720427 gcttctcccttttaccacaatgttaaagatcctaagg 18720463
Score = 46.1 bits (23), Expect = 0.048
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 191 cggctacaccgtccgcgccaccgtgcg 217
||||||||||||||||||||| |||||
Sbjct: 25042037 cggctacaccgtccgcgccacagtgcg 25042063
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 182 bits (92), Expect = 3e-043
Identities = 149/168 (88%)
Strand = Plus / Plus
Query: 581 tcagcaatggtatattttgtccaagacgctggcagaggaggctgcttggaagttctcaag 640
||||||||||||| || |||||||||| || ||||||||||||||||||||||| ||||
Sbjct: 19008599 tcagcaatggtatgttctgtccaagaccctagcagaggaggctgcttggaagttttcaaa 19008658
Query: 641 ggataatggacttgaaatcgttactataaacccagcgatggttattggtcccctgctgca 700
||||||||| ||||||| ||||| | |||||||| ||||| |||||||||||||||||
Sbjct: 19008659 agataatggatttgaaatagttacggtgaacccagcaatggtcattggtcccctgctgca 19008718
Query: 701 gcctacactaaataccagtgctgaagcaatcctgaagttaatcaatgg 748
|||| |||| ||||| |||||||||||||| |||||| ||||||||||
Sbjct: 19008719 gccttcactgaatactagtgctgaagcaattctgaagctaatcaatgg 19008766
Score = 117 bits (59), Expect = 2e-023
Identities = 89/99 (89%)
Strand = Plus / Plus
Query: 114 gggacggggaaggtggtgtgcgtcaccggcgcatcagggtacatcgcgtcctggattgtc 173
||||| |||||| ||||||||||||||||||| || |||||||||||||| ||| | |||
Sbjct: 19006018 gggaccgggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtc 19006077
Query: 174 aggctcctcctcgaccgcggctacaccgtccgcgccacc 212
||||| ||||||| |||||||||||| ||||||||||||
Sbjct: 19006078 aggctgctcctcgcccgcggctacacggtccgcgccacc 19006116
Score = 113 bits (57), Expect = 2e-022
Identities = 117/137 (85%)
Strand = Plus / Plus
Query: 750 tcatcgtctacatatcccaatttttgctttggatgggttaatgtcaaggatgttgccctg 809
||||| || |||||||| ||||| ||||||| ||| | || || |||||||||||||||
Sbjct: 19009528 tcatcctcgacatatcctaatttcagctttggctggataaacgttaaggatgttgccctg 19009587
Query: 810 gcccatatccttgcatacgaggttccctcatcaaatggaaggtactgcatggtggaaaga 869
|| |||||||||||||| || ||||| ||| |||||||||| || |||||||| ||||||
Sbjct: 19009588 gcacatatccttgcatatgaagttccttcagcaaatggaagatattgcatggttgaaaga 19009647
Query: 870 gttgttcactactcaga 886
|||| |||||||||||
Sbjct: 19009648 gttgcgcactactcaga 19009664
Score = 101 bits (51), Expect = 9e-019
Identities = 150/183 (81%)
Strand = Plus / Plus
Query: 394 aggcagagttacttgacccagcagttaagggaacactcaatgttctcggttcatgcaaga 453
|||| |||||||||||||| ||||| || ||||| || |||||||| || || |||||||
Sbjct: 19007406 aggctgagttacttgaccctgcagtcaaaggaacccttaatgttctaggctcctgcaaga 19007465
Query: 454 aagcttctattaaaaaggtggttgtaacatcatctatggctgctgtagcctacaacggga 513
||||||| |||| || || | || |||||||| ||||||||||| |||||||| ||||
Sbjct: 19007466 aagcttccattagaagagttatcgtgacatcatccatggctgctgttgcctacaatggga 19007525
Query: 514 ggccaaggactcctgaggtcacagttgacgagacatggttttctgatccacaaatttgtg 573
||||| |||||||| || ||||| |||||||||||||| | |||| | |||||||
Sbjct: 19007526 aaccaagaactcctgatgtagttgttgatgagacatggttttcagttccagagatttgtg 19007585
Query: 574 aaa 576
|||
Sbjct: 19007586 aaa 19007588
Score = 91.7 bits (46), Expect = 9e-016
Identities = 106/126 (84%)
Strand = Plus / Plus
Query: 938 gtgtgcagatgacaagccgtttgtcccaccctaccaagtatcaaaggagaagataaaaag 997
|||||||||||||||||| | || ||| |||||| ||||||||||| |||||||||||
Sbjct: 19009949 gtgtgcagatgacaagccatcagtgccaatctaccaggtatcaaaggaaaagataaaaag 19010008
Query: 998 cataggcatcgagttgattccactggagacgagcgtcaaggagaccatcgaaagcttgaa 1057
| | ||| | || ||| ||| ||| | |||||| |||||||||||||||| ||||||||
Sbjct: 19010009 cttgggcctggaactgactcccctgcacacgagcatcaaggagaccatcgagagcttgaa 19010068
Query: 1058 agagaa 1063
||||||
Sbjct: 19010069 agagaa 19010074
Score = 67.9 bits (34), Expect = 1e-008
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtccgcgccaccgt 214
|||||||||||||||||||||||||||| |||||||||
Sbjct: 35424322 ctcctcctcgaccgcggctacaccgtccacgccaccgt 35424359
Score = 50.1 bits (25), Expect = 0.003
Identities = 79/97 (81%)
Strand = Plus / Plus
Query: 300 ctgctagaagagggttctttcgatgctgcagttcatggatgcgacactgtatttcatact 359
||||| |||||||| |||||||||||||| || |||| || || ||| || |||||
Sbjct: 19006597 ctgctggaagagggctctttcgatgctgcggtcaatggttgtgattgtgttttccatacg 19006656
Query: 360 gcctctcccttttatcacaatgtcaaggatgctaagg 396
|| ||||||||||| |||||||| || ||| ||||||
Sbjct: 19006657 gcttctcccttttaccacaatgttaaagatcctaagg 19006693
Score = 46.1 bits (23), Expect = 0.048
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 191 cggctacaccgtccgcgccaccgtgcg 217
||||||||||||||||||||| |||||
Sbjct: 25379015 cggctacaccgtccgcgccacagtgcg 25379041
>gb|AU181856.1|AU181856 AU181856 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C60838, mRNA sequence
Length = 459
Score = 168 bits (85), Expect = 5e-039
Identities = 241/293 (82%)
Strand = Plus / Plus
Query: 114 gggacggggaaggtggtgtgcgtcaccggcgcatcagggtacatcgcgtcctggattgtc 173
||||| |||||| ||||||||||||||||||| || |||||||||||||| ||| | |||
Sbjct: 167 gggaccgggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtc 226
Query: 174 aggctcctcctcgaccgcggctacaccgtccgcgccaccgtgcgagacaccgctgaccca 233
||||| ||||||| |||||||||||| |||||||||||| | || |||||| ||||||||
Sbjct: 227 aggctgctcctcgcccgcggctacacggtccgcgccaccatccgggacacctctgaccca 286
Query: 234 aagaaaacattgcacctgactgcgttggatggtgctaaggataggctgcacttatttaaa 293
||||||||| | |||||| ||| ||||||| || || || || || || || || ||
Sbjct: 287 aagaaaacactacacctgcgtgccctggatggagccaacgaaagactccatttgttcgaa 346
Query: 294 gctagcctgctagaagagggttctttcgatgctgcagttcatggatgcgacactgtattt 353
|| | ||||| |||||||| |||||||||||||| || |||| || || ||| ||
Sbjct: 347 gcaaatctgctggaagagggctctttcgatgctgcggtcaatggttgtgattgtgttttc 406
Query: 354 catactgcctctcccttttatcacaatgtcaaggatgctaaggcagagttact 406
||||| || ||||||||||| |||||||| || ||| ||||||| ||||||||
Sbjct: 407 catacggcttctcccttttaccacaatgttaaagatcctaaggctgagttact 459
>gb|AU067974.1|AU067974 AU067974 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C11360_11A, mRNA sequence
Length = 392
Score = 149 bits (75), Expect = 4e-033
Identities = 180/215 (83%)
Strand = Plus / Plus
Query: 114 gggacggggaaggtggtgtgcgtcaccggcgcatcagggtacatcgcgtcctggattgtc 173
||||| |||||| ||||||||||||||||||| || |||||||||||||| ||| | |||
Sbjct: 175 gggaccgggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtc 234
Query: 174 aggctcctcctcgaccgcggctacaccgtccgcgccaccgtgcgagacaccgctgaccca 233
||||| ||||||| |||||||||||| |||||||||||| | || |||||| ||||||||
Sbjct: 235 aggctgctcctcgcccgcggctacacggtccgcgccaccatccgggacacctctgaccca 294
Query: 234 aagaaaacattgcacctgactgcgttggatggtgctaaggataggctgcacttatttaaa 293
||||||||| | |||||| ||| ||||||| || || || || || || || || ||
Sbjct: 295 aagaaaacactacacctgcgtgccctggatggagccaacgaaagactccatttgttcgaa 354
Query: 294 gctagcctgctagaagagggttctttcgatgctgc 328
|| | ||||| |||||||| ||||||||||||||
Sbjct: 355 gcaaatctgctggaagagggctctttcgatgctgc 389
>gb|AU093494.1|AU093494 AU093494 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C40055, mRNA sequence
Length = 372
Score = 149 bits (75), Expect = 4e-033
Identities = 180/215 (83%)
Strand = Plus / Plus
Query: 114 gggacggggaaggtggtgtgcgtcaccggcgcatcagggtacatcgcgtcctggattgtc 173
||||| |||||| ||||||||||||||||||| || |||||||||||||| ||| | |||
Sbjct: 149 gggaccgggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtc 208
Query: 174 aggctcctcctcgaccgcggctacaccgtccgcgccaccgtgcgagacaccgctgaccca 233
||||| ||||||| |||||||||||| |||||||||||| | || |||||| ||||||||
Sbjct: 209 aggctgctcctcgcccgcggctacacggtccgcgccaccatccgggacacctctgaccca 268
Query: 234 aagaaaacattgcacctgactgcgttggatggtgctaaggataggctgcacttatttaaa 293
||||||||| | |||||| ||| ||||||| || || || || || || || || ||
Sbjct: 269 aagaaaacactacacctgcgtgccctggatggagccaacgaaagactccatttgttcgaa 328
Query: 294 gctagcctgctagaagagggttctttcgatgctgc 328
|| | ||||| |||||||| ||||||||||||||
Sbjct: 329 gcaaatctgctggaagagggctctttcgatgctgc 363
>gb|AU181468.1|AU181468 AU181468 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C30129, mRNA sequence
Length = 461
Score = 135 bits (68), Expect = 7e-029
Identities = 205/251 (81%)
Strand = Plus / Plus
Query: 813 catatccttgcatacgaggttccctcatcaaatggaaggtactgcatggtggaaagagtt 872
|||||||||||||| || ||||| ||| |||||||||| || |||||||| |||||||||
Sbjct: 4 catatccttgcatatgaagttccttcagcaaatggaagatattgcatggttgaaagagtt 63
Query: 873 gttcactactcagaactggtgaacattatccgcaacatgtatcctacccttcctcttccg 932
| ||||||||||| || || | || || || | |||||||| | ||||||| ||
Sbjct: 64 gcgcactactcagagctcgtccaaatcattcgtgagatgtatcccaatattcctctgcca 123
Query: 933 gacaagtgtgcagatgacaagccgtttgtcccaccctaccaagtatcaaaggagaagata 992
||||||||||||||||||||||| | || ||| |||||| ||||||||||| ||||||
Sbjct: 124 gacaagtgtgcagatgacaagccatcagtgccaatctaccaggtatcaaaggaaaagata 183
Query: 993 aaaagcataggcatcgagttgattccactggagacgagcgtcaaggagaccatcgaaagc 1052
|||||| | ||| | || ||| ||| ||| | |||||| |||||||||||||||| |||
Sbjct: 184 aaaagcttgggcctggaactgactcccctgcacacgagcatcaaggagaccatcgagagc 243
Query: 1053 ttgaaagagaa 1063
|||||| ||||
Sbjct: 244 ttgaaanagaa 254
>gb|AU163616.1|AU163616 AU163616 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3023, mRNA sequence
Length = 447
Score = 131 bits (66), Expect = 1e-027
Identities = 115/130 (88%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 114 gggacggggaaggtggtgtgcgtcaccggcgcatcagggtacatcgcgtcctggattgtc 173
||||| |||||| ||||||||||||||||||| || |||||||||||||| ||| | |||
Sbjct: 156 gggaccgggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtc 215
Query: 174 aggctcctcctcgaccgcggctacaccgtccgcgccaccgtgcgagacaccgct-gaccc 232
||||| ||||||| |||||||||||| |||||||||||| | || |||||| || |||||
Sbjct: 216 aggctgctcctcgcccgcggctacacggtccgcgccaccatccgggacacctctggaccc 275
Query: 233 aaagaaaaca 242
||||||||||
Sbjct: 276 aaagaaaaca 285
>gb|AU197714.1|AU197714 AU197714 Rice mature leaf Oryza sativa (japonica cultivar-group) cDNA
clone S20781, mRNA sequence
Length = 450
Score = 131 bits (66), Expect = 1e-027
Identities = 211/260 (81%)
Strand = Plus / Plus
Query: 804 gccctggcccatatccttgcatacgaggttccctcatcaaatggaaggtactgcatggtg 863
|||||||| |||||||||||||| || ||||| ||| |||||||||| || ||||||||
Sbjct: 1 gccctggcacatatccttgcatatgaagttccttcagcaaatggaagatattgcatggtt 60
Query: 864 gaaagagttgttcactactcagaactggtgaacattatccgcaacatgtatcctaccctt 923
|||||||||| ||||||||||| || || | || || || | |||||||| | ||
Sbjct: 61 gaaagagttgcgcactactcagagctcgtccaaatcattcgtgagatgtatcccaatatt 120
Query: 924 cctcttccggacaagtgtgcagatgacaagccgtttgtcccaccctaccaagtatcaaag 983
||||| || |||||||||||||||| |||||| | || || || ||| |||||||||
Sbjct: 121 cctctgccagacaagtgtgcagatgncaagccatcagtgccnatcttccaggtatcaaag 180
Query: 984 gagaagataaaaagcataggcatcgagttgattccactggagacgagcgtcaaggagacc 1043
|| |||||||||||| | ||| | || ||| ||| ||| | |||||| |||||||||||
Sbjct: 181 gaaaagataaaaagcttgggcctggaactgactcccctgcacacgagcatcaaggagacc 240
Query: 1044 atcgaaagcttgaaagagaa 1063
||||| ||||||||||||||
Sbjct: 241 atcgagagcttgaaagagaa 260
>gb|AU069349.1|AU069349 AU069349 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C60720_7A, mRNA sequence
Length = 376
Score = 129 bits (65), Expect = 4e-027
Identities = 114/129 (88%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 114 gggacggggaaggtggtgtgcgtcaccggcgcatcagggtacatcgcgtcctggattgtc 173
||||| |||||| ||||||||||||||||||| || |||||||||||||| ||| | |||
Sbjct: 157 gggaccgggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtc 216
Query: 174 aggctcctcctcgaccgcggctacaccgtccgcgccaccgtgcgagacaccgctgaccca 233
||||| ||||||| |||||||||||| |||||||||||| | || |||| | ||||||||
Sbjct: 217 aggctgctcctcgcccgcggctacacggtccgcgccaccatccgggaca-ctctgaccca 275
Query: 234 aagaaaaca 242
|||||||||
Sbjct: 276 aagaaaaca 284
>gb|AU069566.1|AU069566 AU069566 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C62973_1A, mRNA sequence
Length = 458
Score = 109 bits (55), Expect = 4e-021
Identities = 107/125 (85%)
Strand = Plus / Plus
Query: 127 tggtgtgcgtcaccggcgcatcagggtacatcgcgtcctggattgtcaggctcctcctcg 186
||||||||||||||||||| || |||||||||||||| ||| | || ||||| |||||||
Sbjct: 179 tggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtaaggctgctcctcg 238
Query: 187 accgcggctacaccgtccgcgccaccgtgcgagacaccgctgacccaaagaaaacattgc 246
||| |||||||| |||||||||||| | || ||||| || |||||||||||||| | |
Sbjct: 239 cccgnggctacacggtccgcgccaccatccggnacacctctaacccaaagaaaacactac 298
Query: 247 acctg 251
|||||
Sbjct: 299 acctg 303
>gb|D40184.1|D40184 RICS1972A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 389
Score = 103 bits (52), Expect = 2e-019
Identities = 87/99 (87%)
Strand = Plus / Plus
Query: 114 gggacggggaaggtggtgtgcgtcaccggcgcatcagggtacatcgcgtcctggattgtc 173
||||| |||||| ||||||||||||||||||| || |||||||||||||| ||| | |||
Sbjct: 182 gggaccgggaagctggtgtgcgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtc 241
Query: 174 aggctcctcctcgaccgcggctacaccgtccgcgccacc 212
||||| ||||||| |||||| ||||| || |||||||||
Sbjct: 242 aggctgctcctcgcccgcggttacacggtncgcgccacc 280
>gb|AU093493.1|AU093493 AU093493 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C40055, mRNA sequence
Length = 482
Score = 103 bits (52), Expect = 2e-019
Identities = 81/91 (89%)
Strand = Plus / Plus
Query: 795 aaggatgttgccctggcccatatccttgcatacgaggttccctcatcaaatggaaggtac 854
||||||||||||||||| |||||||||||||| || ||||| ||| |||||||||| ||
Sbjct: 2 aaggatgttgccctggcncatatccttgcatatgaagttccttcagcaaatggaagatat 61
Query: 855 tgcatggtggaaagagttgttcactactcag 885
|||||||| |||||||||| ||||||||||
Sbjct: 62 tgcatggttgaaagagttgcgcactactcag 92
Score = 101 bits (51), Expect = 9e-019
Identities = 119/142 (83%)
Strand = Plus / Plus
Query: 922 ttcctcttccggacaagtgtgcagatgacaagccgtttgtcccaccctaccaagtatcaa 981
||||||| || ||||||||||||||||||||||| | || ||| |||||| |||||||
Sbjct: 129 ttcctctgccagacaagtgtgcagatgacaagccatcagtgccaatctaccaggtatcaa 188
Query: 982 aggagaagataaaaagcataggcatcgagttgattccactggagacgagcgtcaaggaga 1041
|||| |||||||||||| | ||| | || ||| ||| ||| | ||| || |||||||||
Sbjct: 189 aggaaaagataaaaagcttgggcctggaactgactcccctgcacacgngcatcaaggaga 248
Query: 1042 ccatcgaaagcttgaaagagaa 1063
||||||| ||||||||||||||
Sbjct: 249 ccatcgagagcttgaaagagaa 270
>gb|CA997959.1|CA997959 S234D1_D11 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 412
Score = 103 bits (52), Expect = 2e-019
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 669 aacccagcgatggttattggtcccctgctgcagcctacactaaataccagtgctgaagca 728
|||||||| ||||| ||||||||||||||||||||| |||| ||||| ||||||||||||
Sbjct: 13 aacccagcaatggtcattggtcccctgctgcagccttcactgaatactagtgctgaagca 72
Query: 729 atcctgaagttaatcaatgg 748
|| |||||| ||||||||||
Sbjct: 73 attctgaagctaatcaatgg 92
>gb|C98735.1|C98735 C98735 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3023_2Z, mRNA sequence
Length = 467
Score = 101 bits (51), Expect = 9e-019
Identities = 119/142 (83%)
Strand = Plus / Plus
Query: 922 ttcctcttccggacaagtgtgcagatgacaagccgtttgtcccaccctaccaagtatcaa 981
||||||| || ||||||||||||||||||||||| | || ||| ||||| |||||||
Sbjct: 139 ttcctctgccagacaagtgtgcagatgacaagccatcagtgccaatctaccnggtatcaa 198
Query: 982 aggagaagataaaaagcataggcatcgagttgattccactggagacgagcgtcaaggaga 1041
|||| |||||||||||| | ||| | || ||| ||| ||| | |||||| |||||||||
Sbjct: 199 aggaaaagataaaaagcttgggcctggaactgactcccctgcacacgagcatcaaggaga 258
Query: 1042 ccatcgaaagcttgaaagagaa 1063
||||||| ||||||||||||||
Sbjct: 259 ccatcgagagcttgaaagagaa 280
Score = 60.0 bits (30), Expect = 3e-006
Identities = 70/81 (86%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 795 aaggatgttgccc-tggcccatatccttgcatacg-aggttccctcatcaaatggaaggt 852
||||||||||||| |||| |||||||||||||| | | ||||| ||| |||||||||| |
Sbjct: 8 aaggatgttgcccctggcacatatccttgcatatgaaagttccttcagcaaatggaagat 67
Query: 853 actgcatggtggaaagagttg 873
| | |||||| ||||||||||
Sbjct: 68 attncatggttgaaagagttg 88
>gb|CF326219.1|CF326219 JMT1--05-G24.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--05-G24, mRNA sequence
Length = 554
Score = 95.6 bits (48), Expect = 6e-017
Identities = 105/124 (84%)
Strand = Plus / Minus
Query: 750 tcatcgtctacatatcccaatttttgctttggatgggttaatgtcaaggatgttgccctg 809
||||| || |||||||| ||||| ||||||| ||| | || || |||||||||||||||
Sbjct: 546 tcatcctcgacatatcctaatttcagctttggctggataaacgttaaggatgttgccctg 487
Query: 810 gcccatatccttgcatacgaggttccctcatcaaatggaaggtactgcatggtggaaaga 869
|| |||||||||||||| || ||||| ||| |||||||||| || |||||||| |||| |
Sbjct: 486 gcacatatccttgcatatgaagttccttcagcaaatggaagatattgcatggttgaaaaa 427
Query: 870 gttg 873
||||
Sbjct: 426 gttg 423
Score = 52.0 bits (26), Expect = 8e-004
Identities = 56/66 (84%)
Strand = Plus / Minus
Query: 933 gacaagtgtgcagatgacaagccgtttgtcccaccctaccaagtatcaaaggagaagata 992
||||||||||||||||||||||| | || ||| | ||| ||||||||||| ||||||
Sbjct: 363 gacaagtgtgcagatgacaagccatcagtgccaattttccaggtatcaaaggaaaagata 304
Query: 993 aaaagc 998
||||||
Sbjct: 303 aaaagc 298
>gb|AU166661.1|AU166661 AU166661 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C30546, mRNA sequence
Length = 369
Score = 93.7 bits (47), Expect = 2e-016
Identities = 120/143 (83%), Gaps = 1/143 (0%)
Strand = Plus / Plus
Query: 922 ttcctcttccggacaagtgtgcagatgacaagccgtttgtcccaccctaccaagtatcaa 981
||||||| || ||||||||||||||||||||||| | || ||| |||||| |||||||
Sbjct: 35 ttcctctgccagacaagtgtgcagatgacaagccatcagtgccaatctaccaggtatcaa 94
Query: 982 a-ggagaagataaaaagcataggcatcgagttgattccactggagacgagcgtcaaggag 1040
| ||| |||||||||||| | ||| | || ||| ||| ||| | |||||| ||||||||
Sbjct: 95 aaggaaaagataaaaagcttgggcctggaactgactcccctgcacacgagcatcaaggag 154
Query: 1041 accatcgaaagcttgaaagagaa 1063
|||||||| ||||||||||||||
Sbjct: 155 accatcgagagcttgaaagagaa 177
>gb|D22126.1|D22126 RICC10383A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C10383_1A, mRNA sequence
Length = 322
Score = 89.7 bits (45), Expect = 4e-015
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 121 ggaaggtggtgtgcgtcaccggcgcatcagggtacatcgcgtcctggattgtcaggctcc 180
||||| |||||| |||||||||||| || |||||||||||||| ||| | |||||||| |
Sbjct: 168 ggaagctggtgtncgtcaccggcgcgtcggggtacatcgcgtcgtggctcgtcaggctgc 227
Query: 181 tcctcgaccgcggctacac 199
||||||||||||| |||||
Sbjct: 228 tcctcgaccgcggntacac 246
>gb|AU062682.2|AU062682 AU062682 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C30129_1A, mRNA sequence
Length = 325
Score = 87.7 bits (44), Expect = 1e-014
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 172 tcaggctcctcctcgaccgcggctacaccgtccgcgccaccgtgcgagacaccgctgacc 231
||||||| ||||||| |||||||||||| |||||||||||| | || |||||| ||||||
Sbjct: 1 tcaggctgctcctcgcccgcggctacacggtccgcgccaccatccgggacacctctgacc 60
Query: 232 caaagaaaacattgcacctg 251
||||||||||| | ||||||
Sbjct: 61 caaagaaaacactacacctg 80
>gb|AU181857.1|AU181857 AU181857 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C60838, mRNA sequence
Length = 340
Score = 71.9 bits (36), Expect = 8e-010
Identities = 105/129 (81%)
Strand = Plus / Plus
Query: 935 caagtgtgcagatgacaagccgtttgtcccaccctaccaagtatcaaaggagaagataaa 994
||||||||||||||||||||| | || ||| ||||| ||||||||||| || |||||
Sbjct: 1 caagtgtgcagatgacaagccatcagtgccaatttaccaggtatcaaaggaaaanataaa 60
Query: 995 aagcataggcatcgagttgattccactggagacgagcgtcaaggagaccatcgaaagctt 1054
|||| | ||| | || ||| ||| ||| |||||| |||||||||||||||| |||||
Sbjct: 61 aagcttgggcctggaactgactcccctgcncacgagcatcaaggagaccatcgagagctt 120
Query: 1055 gaaagagaa 1063
|||| ||||
Sbjct: 121 gaaanagaa 129
>gb|AU182030.1|AU182030 AU182030 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C62973, mRNA sequence
Length = 450
Score = 71.9 bits (36), Expect = 8e-010
Identities = 180/228 (78%), Gaps = 1/228 (0%)
Strand = Plus / Plus
Query: 831 gttccctcatcaaatggaaggtactgcatggtggaaagagttgttcactactcagaactg 890
||||| ||| |||||||||| || |||||||| |||||||||| | ||||||||| ||
Sbjct: 7 gttccttcagcaaatggaagatattgcatggttgaaagagttgcgcnctactcagagctn 66
Query: 891 gtgaacattatccgcaacatgtatcctacccttcctcttccggacaagtgtgcagatgac 950
|| | || || | | |||||||| | ||||| | || ||||||||||||||||||
Sbjct: 67 gtccaaatcattngtgagatgtatcccaatattcctntgccagacaagtgtgcagatgac 126
Query: 951 aagccgtttgtcccaccctaccaagtatcaaaggagaagataaaaagcataggcatcgag 1010
||||| | || ||| | ||| ||||||||||| |||||||||||| | ||| | ||
Sbjct: 127 aagccatcagtgccaattt-ccaggtatcaaaggaaaagataaaaagcttgggcctggaa 185
Query: 1011 ttgattccactggagacgagcgtcaaggagaccatcgaaagcttgaaa 1058
||| ||| ||| | |||||| |||||||||||||||| |||||||||
Sbjct: 186 ctgactcccctgcacacgagcatcaaggagaccatcgagagcttgaaa 233
>gb|AACV01002608.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002608, whole
genome shotgun sequence
Length = 16375
Score = 67.9 bits (34), Expect = 1e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 177 ctcctcctcgaccgcggctacaccgtccgcgccaccgt 214
|||||||||||||||||||||||||||| |||||||||
Sbjct: 13336 ctcctcctcgaccgcggctacaccgtccacgccaccgt 13299
>ref|NM_190422.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 981
Score = 67.9 bits (34), Expect = 1e-008
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtccgcgccaccgt 214
|||||||||||||||||||||||||||| |||||||||
Sbjct: 82 ctcctcctcgaccgcggctacaccgtccacgccaccgt 119
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 67.9 bits (34), Expect = 1e-008
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtccgcgccaccgt 214
|||||||||||||||||||||||||||| |||||||||
Sbjct: 9952375 ctcctcctcgaccgcggctacaccgtccacgccaccgt 9952412
>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1088C09
Length = 154084
Score = 67.9 bits (34), Expect = 1e-008
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtccgcgccaccgt 214
|||||||||||||||||||||||||||| |||||||||
Sbjct: 48271 ctcctcctcgaccgcggctacaccgtccacgccaccgt 48308
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 67.9 bits (34), Expect = 1e-008
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 177 ctcctcctcgaccgcggctacaccgtccgcgccaccgt 214
|||||||||||||||||||||||||||| |||||||||
Sbjct: 9708672 ctcctcctcgaccgcggctacaccgtccacgccaccgt 9708709
>dbj|AK070746.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064M01, full
insert sequence
Length = 1335
Score = 63.9 bits (32), Expect = 2e-007
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 132 tgcgtcaccggcgcatcagggtacatcgcgtcctggattgtcaggctcctcctcgaccgc 191
|||||||||||||| |||| ||||| ||| ||||| |||| ||||||||||| ||||
Sbjct: 118 tgcgtcaccggcgccggcgggttcatcgggtcgtggatcgtcaagctcctcctcgcccgc 177
Query: 192 ggctacaccgtccgcg 207
|||||| |||||||||
Sbjct: 178 ggctacgccgtccgcg 193
>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1297_C09
Length = 163378
Score = 63.9 bits (32), Expect = 2e-007
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 132 tgcgtcaccggcgcatcagggtacatcgcgtcctggattgtcaggctcctcctcgaccgc 191
|||||||||||||| |||| ||||| ||| ||||| |||| ||||||||||| ||||
Sbjct: 32607 tgcgtcaccggcgccggcgggttcatcgggtcgtggatcgtcaagctcctcctcgcccgc 32666
Query: 192 ggctacaccgtccgcg 207
|||||| |||||||||
Sbjct: 32667 ggctacgccgtccgcg 32682
>ref|XM_464328.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1335
Score = 63.9 bits (32), Expect = 2e-007
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 132 tgcgtcaccggcgcatcagggtacatcgcgtcctggattgtcaggctcctcctcgaccgc 191
|||||||||||||| |||| ||||| ||| ||||| |||| ||||||||||| ||||
Sbjct: 118 tgcgtcaccggcgccggcgggttcatcgggtcgtggatcgtcaagctcctcctcgcccgc 177
Query: 192 ggctacaccgtccgcg 207
|||||| |||||||||
Sbjct: 178 ggctacgccgtccgcg 193
>ref|NT_107176.1| Oryza sativa (japonica cultivar-group)
Length = 1593847
Score = 63.9 bits (32), Expect = 2e-007
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 132 tgcgtcaccggcgcatcagggtacatcgcgtcctggattgtcaggctcctcctcgaccgc 191
|||||||||||||| |||| ||||| ||| ||||| |||| ||||||||||| ||||
Sbjct: 1463076 tgcgtcaccggcgccggcgggttcatcgggtcgtggatcgtcaagctcctcctcgcccgc 1463135
Query: 192 ggctacaccgtccgcg 207
|||||| |||||||||
Sbjct: 1463136 ggctacgccgtccgcg 1463151
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,773,239
Number of Sequences: 438736
Number of extensions: 1773239
Number of successful extensions: 9011
Number of sequences better than 0.5: 76
Number of HSP's better than 0.5 without gapping: 71
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 8302
Number of HSP's gapped (non-prelim): 638
length of query: 1311
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1290
effective length of database: 2,791,206,460
effective search space: 3600656333400
effective search space used: 3600656333400
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)