BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1724812.2.1
(804 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB671580.1|CB671580 OSJNEe05D17.r OSJNEe Oryza sativa (j... 301 3e-079
ref|NT_107177.1| Oryza sativa (japonica cultivar-group) 301 3e-079
dbj|AP004046.2| Oryza sativa (japonica cultivar-group) geno... 301 3e-079
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 301 3e-079
gb|CB646316.1|CB646316 OSJNEb08L08.r OSJNEb Oryza sativa (j... 291 3e-076
dbj|AK105236.1| Oryza sativa (japonica cultivar-group) cDNA... 194 5e-047
ref|XM_464391.1| Oryza sativa (japonica cultivar-group), mRNA 194 5e-047
gb|CB643541.1|CB643541 OSJNEb04E12.r OSJNEb Oryza sativa (j... 172 2e-040
gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 ... 74 1e-010
gb|AACV01007694.1| Oryza sativa (japonica cultivar-group) c... 74 1e-010
ref|XM_469348.1| Oryza sativa (japonica cultivar-group), mRNA 74 1e-010
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 74 1e-010
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 74 1e-010
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 74 1e-010
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 74 1e-010
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 74 1e-010
dbj|AK108846.1| Oryza sativa (japonica cultivar-group) cDNA... 68 8e-009
dbj|AP002843.2| Oryza sativa (japonica cultivar-group) geno... 68 8e-009
gb|AACV01001848.1| Oryza sativa (japonica cultivar-group) c... 68 8e-009
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 68 8e-009
ref|NM_192840.1| Oryza sativa (japonica cultivar-group), p... 68 8e-009
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 68 8e-009
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 68 8e-009
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 68 8e-009
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 68 8e-009
dbj|AK108674.1| Oryza sativa (japonica cultivar-group) cDNA... 66 3e-008
gb|AC129717.3| Oryza sativa (japonica cultivar-group) chrom... 66 3e-008
gb|AACV01012676.1| Oryza sativa (japonica cultivar-group) c... 66 3e-008
ref|NT_107220.1| Oryza sativa (japonica cultivar-group) 66 3e-008
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 66 3e-008
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 66 3e-008
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 66 3e-008
dbj|AP003941.1| Oryza sativa (japonica cultivar-group) chro... 64 1e-007
dbj|AP004327.1| Oryza sativa (japonica cultivar-group) chro... 64 1e-007
dbj|AK062590.1| Oryza sativa (japonica cultivar-group) cDNA... 64 1e-007
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 64 1e-007
gb|AACV01014458.1| Oryza sativa (japonica cultivar-group) c... 64 1e-007
dbj|AP003617.3| Oryza sativa (japonica cultivar-group) geno... 64 1e-007
dbj|AP004571.3| Oryza sativa (japonica cultivar-group) geno... 64 1e-007
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 64 1e-007
gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-grou... 60 2e-006
gb|AACV01021651.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
ref|NM_196703.1| Oryza sativa (japonica cultivar-group) put... 60 2e-006
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 60 2e-006
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
gb|CB659466.1|CB659466 OSJNEc16H18.r OSJNEc Oryza sativa (j... 58 8e-006
gb|CB666604.1|CB666604 OSJNEd13J04.r OSJNEd Oryza sativa (j... 58 8e-006
dbj|AK109806.1| Oryza sativa (japonica cultivar-group) cDNA... 58 8e-006
gb|AC079887.17| Oryza sativa (japonica cultivar-group) chro... 58 8e-006
gb|AACV01007956.1| Oryza sativa (japonica cultivar-group) c... 58 8e-006
gb|AACV01010151.1| Oryza sativa (japonica cultivar-group) c... 58 8e-006
ref|XM_469829.1| Oryza sativa (japonica cultivar-group), mRNA 58 8e-006
ref|XM_473231.1| Oryza sativa (japonica cultivar-group), p... 58 8e-006
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 58 8e-006
ref|NT_107187.1| Oryza sativa (japonica cultivar-group) 58 8e-006
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 58 8e-006
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 58 8e-006
emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromoso... 58 8e-006
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 58 8e-006
gb|AQ159266.1|AQ159266 nbxb0013E02r CUGI Rice BAC Library O... 56 3e-005
gb|AQ274007.1|AQ274007 nbxb0032I07f CUGI Rice BAC Library O... 56 3e-005
gb|AQ577711.1|AQ577711 nbxb0091F07r CUGI Rice BAC Library O... 56 3e-005
dbj|AK066469.1| Oryza sativa (japonica cultivar-group) cDNA... 56 3e-005
dbj|AK066593.1| Oryza sativa (japonica cultivar-group) cDNA... 56 3e-005
ref|NT_107124.1| Oryza sativa (japonica cultivar-group) 56 3e-005
ref|NT_107236.1| Oryza sativa (japonica cultivar-group) 56 3e-005
dbj|AP005915.3| Oryza sativa (japonica cultivar-group) geno... 56 3e-005
gb|AACV01003584.1| Oryza sativa (japonica cultivar-group) c... 56 3e-005
gb|AACV01003585.1| Oryza sativa (japonica cultivar-group) c... 56 3e-005
gb|AACV01008641.1| Oryza sativa (japonica cultivar-group) c... 56 3e-005
gb|AACV01009340.1| Oryza sativa (japonica cultivar-group) c... 56 3e-005
gb|AACV01009341.1| Oryza sativa (japonica cultivar-group) c... 56 3e-005
dbj|AP006050.3| Oryza sativa (japonica cultivar-group) geno... 56 3e-005
ref|XM_471859.1| Oryza sativa (japonica cultivar-group), p... 56 3e-005
ref|XM_471860.1| Oryza sativa (japonica cultivar-group), p... 56 3e-005
ref|NT_107196.1| Oryza sativa (japonica cultivar-group) 56 3e-005
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 56 3e-005
gb|CH401184.1| Oryza sativa (japonica cultivar-group) chrom... 56 3e-005
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 56 3e-005
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 56 3e-005
emb|AL731634.4|OSJN00276 Oryza sativa genomic DNA, chromoso... 56 3e-005
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 56 3e-005
gb|AC146522.2| Oryza sativa (japonica cultivar-group) chrom... 56 3e-005
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 56 3e-005
gb|CA754538.1|CA754538 BR030001000_PLATE_C03_19_020.ab1 OA ... 54 1e-004
gb|AQ916649.1|AQ916649 nbeb0066N22r CUGI Rice BAC Library (... 52 5e-004
gb|CB643291.1|CB643291 OSJNEb03O11.f OSJNEb Oryza sativa (j... 52 5e-004
gb|CB643653.1|CB643653 OSJNEb04H10.r OSJNEb Oryza sativa (j... 52 5e-004
gb|CB643719.1|CB643719 OSJNEb04J03.r OSJNEb Oryza sativa (j... 52 5e-004
gb|CB643721.1|CB643721 OSJNEb04J04.r OSJNEb Oryza sativa (j... 52 5e-004
gb|CB650859.1|CB650859 OSJNEb15I22.r OSJNEb Oryza sativa (j... 52 5e-004
gb|CB651523.1|CB651523 OSJNEb16I07.r OSJNEb Oryza sativa (j... 52 5e-004
gb|CB657828.1|CB657828 OSJNEc13H06.f OSJNEc Oryza sativa (j... 52 5e-004
gb|CB657829.1|CB657829 OSJNEc13H06.r OSJNEc Oryza sativa (j... 52 5e-004
gb|CB661740.1|CB661740 OSJNEd05A15.r OSJNEd Oryza sativa (j... 52 5e-004
gb|CB668190.1|CB668190 OSJNEd15O18.r OSJNEd Oryza sativa (j... 52 5e-004
gb|CB677705.1|CB677705 OSJNEe14P10.r OSJNEe Oryza sativa (j... 52 5e-004
gb|CB680895.1|CB680895 OSJNEf06G17.r OSJNEf Oryza sativa (j... 52 5e-004
dbj|AK062283.1| Oryza sativa (japonica cultivar-group) cDNA... 52 5e-004
dbj|AK065112.1| Oryza sativa (japonica cultivar-group) cDNA... 52 5e-004
dbj|AK109457.1| Oryza sativa (japonica cultivar-group) cDNA... 52 5e-004
ref|NT_107075.1| Oryza sativa (japonica cultivar-group) 52 5e-004
gb|AC109596.3| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|AC108499.3| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|AACV01002128.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
gb|AACV01012608.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
gb|AACV01020390.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
ref|NM_192093.1| Oryza sativa (japonica cultivar-group), p... 52 5e-004
ref|NM_192094.1| Oryza sativa (japonica cultivar-group), p... 52 5e-004
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 52 5e-004
ref|NT_107218.1| Oryza sativa (japonica cultivar-group) 52 5e-004
dbj|AP006173.3| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
dbj|AP003455.2| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
dbj|AP003452.3| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
gb|AQ861812.1|AQ861812 nbeb0017J05r CUGI Rice BAC Library (... 50 0.002
gb|AQ913482.1|AQ913482 nbeb0041B12r CUGI Rice BAC Library (... 50 0.002
gb|AZ130075.1|AZ130075 OSJNBb0102P10r CUGI Rice BAC Library... 50 0.002
gb|CB679383.1|CB679383 OSJNEf02N03.r OSJNEf Oryza sativa (j... 50 0.002
dbj|AK064105.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK068040.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK106639.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AP005012.3| Oryza sativa (japonica cultivar-group) geno... 50 0.002
gb|AACV01003519.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01005441.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01010075.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
ref|XM_467865.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.002
ref|XM_473094.1| Oryza sativa (japonica cultivar-group), p... 50 0.002
ref|NT_079864.2| Oryza sativa (japonica cultivar-group) 50 0.002
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 50 0.002
ref|XM_506981.1| PREDICTED Oryza sativa (japonica cultivar-... 50 0.002
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromoso... 50 0.002
emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromoso... 50 0.002
gb|CB645026.1|CB645026 OSJNEb06H20.r OSJNEb Oryza sativa (j... 48 0.007
dbj|AK065987.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.007
dbj|AK068878.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.007
dbj|AK100519.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.007
dbj|AK100689.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.007
dbj|AK105912.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.007
dbj|AK119544.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.007
gb|AACV01000282.1| Oryza sativa (japonica cultivar-group) c... 48 0.007
gb|AACV01002304.1| Oryza sativa (japonica cultivar-group) c... 48 0.007
gb|AACV01005042.1| Oryza sativa (japonica cultivar-group) c... 48 0.007
gb|AACV01009342.1| Oryza sativa (japonica cultivar-group) c... 48 0.007
gb|AACV01016342.1| Oryza sativa (japonica cultivar-group) c... 48 0.007
ref|NM_191572.1| Oryza sativa (japonica cultivar-group), p... 48 0.007
ref|XM_471823.1| Oryza sativa (japonica cultivar-group), p... 48 0.007
ref|XM_478346.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.007
ref|XM_506362.1| PREDICTED Oryza sativa (japonica cultivar-... 48 0.007
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 48 0.007
dbj|AP005185.4| Oryza sativa (japonica cultivar-group) geno... 48 0.007
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 48 0.007
dbj|AP002523.1| Oryza sativa (japonica cultivar-group) geno... 48 0.007
dbj|AP003560.2| Oryza sativa (japonica cultivar-group) geno... 48 0.007
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.007
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.007
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.007
gb|AC158405.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.007
emb|AL606443.3|OSJN00008 Oryza sativa genomic DNA, chromoso... 48 0.007
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 48 0.007
gb|AQ860883.1|AQ860883 nbeb0015L24f CUGI Rice BAC Library (... 46 0.029
gb|AQ866659.1|AQ866659 nbeb0028P11f CUGI Rice BAC Library (... 46 0.029
gb|AQ868140.1|AQ868140 nbeb0021H12r CUGI Rice BAC Library (... 46 0.029
gb|AZ047464.1|AZ047464 nbeb0094M23f CUGI Rice BAC Library (... 46 0.029
gb|AZ131490.1|AZ131490 OSJNBb0111A07f CUGI Rice BAC Library... 46 0.029
gb|CB641583.1|CB641583 OSJNEb01E21.r OSJNEb Oryza sativa (j... 46 0.029
gb|CB653386.1|CB653386 OSJNEc04F22.r OSJNEc Oryza sativa (j... 46 0.029
gb|CD670635.1|CD670635 OsMR050 5MT resistant rice mutant cD... 46 0.029
dbj|AP004400.1| Oryza sativa (japonica cultivar-group) chro... 46 0.029
dbj|AK064151.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.029
dbj|AK068586.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.029
dbj|AK069049.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.029
dbj|AK105478.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.029
dbj|AK105674.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.029
dbj|AP003872.3| Oryza sativa (japonica cultivar-group) geno... 46 0.029
dbj|AP004636.3| Oryza sativa (japonica cultivar-group) geno... 46 0.029
dbj|AK120020.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.029
dbj|AP004382.2| Oryza sativa (japonica cultivar-group) geno... 46 0.029
dbj|AP005501.3| Oryza sativa (japonica cultivar-group) geno... 46 0.029
emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromoso... 46 0.029
dbj|AP004560.3| Oryza sativa (japonica cultivar-group) geno... 46 0.029
dbj|AP004045.3| Oryza sativa (japonica cultivar-group) geno... 46 0.029
dbj|AP005008.3| Oryza sativa (japonica cultivar-group) geno... 46 0.029
dbj|AP004192.3| Oryza sativa (japonica cultivar-group) geno... 46 0.029
dbj|AP005186.4| Oryza sativa (japonica cultivar-group) geno... 46 0.029
gb|AACV01000295.1| Oryza sativa (japonica cultivar-group) c... 46 0.029
gb|AACV01001935.1| Oryza sativa (japonica cultivar-group) c... 46 0.029
gb|AACV01003571.1| Oryza sativa (japonica cultivar-group) c... 46 0.029
gb|AACV01004995.1| Oryza sativa (japonica cultivar-group) c... 46 0.029
gb|AACV01015538.1| Oryza sativa (japonica cultivar-group) c... 46 0.029
gb|AACV01016311.1| Oryza sativa (japonica cultivar-group) c... 46 0.029
gb|AACV01017371.1| Oryza sativa (japonica cultivar-group) c... 46 0.029
gb|AACV01018433.1| Oryza sativa (japonica cultivar-group) c... 46 0.029
dbj|AP002524.2| Oryza sativa (japonica cultivar-group) geno... 46 0.029
dbj|AP003607.3| Oryza sativa (japonica cultivar-group) geno... 46 0.029
dbj|AP004367.4| Oryza sativa (japonica cultivar-group) geno... 46 0.029
ref|NM_189539.1| Oryza sativa (japonica cultivar-group), p... 46 0.029
ref|NM_192249.1| Oryza sativa (japonica cultivar-group), p... 46 0.029
ref|XM_464540.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.029
ref|XM_466915.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.029
ref|XM_469831.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.029
ref|XM_471830.1| Oryza sativa (japonica cultivar-group), p... 46 0.029
ref|XM_477223.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.029
ref|XM_478273.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.029
ref|XM_478348.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.029
ref|XM_478349.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.029
ref|XM_482293.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.029
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 46 0.029
ref|XM_550389.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.029
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 46 0.029
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 46 0.029
dbj|AP003259.4| Oryza sativa (japonica cultivar-group) geno... 46 0.029
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.029
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.029
gb|CH401221.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.029
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.029
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 46 0.029
gb|AU077934.1|AU077934 AU077934 Rice callus Oryza sativa (j... 44 0.12
gb|AU078176.1|AU078176 AU078176 Rice callus Oryza sativa (j... 44 0.12
gb|AU097595.1|AU097595 AU097595 Rice callus Oryza sativa (j... 44 0.12
gb|CB637626.1|CB637626 OSJNEa04J02.r OSJNEa Oryza sativa (j... 44 0.12
gb|CB646078.1|CB646078 OSJNEb08E05.r OSJNEb Oryza sativa (j... 44 0.12
gb|CB646298.1|CB646298 OSJNEb08K19.f OSJNEb Oryza sativa (j... 44 0.12
gb|CB647449.1|CB647449 OSJNEb10G04.r OSJNEb Oryza sativa (j... 44 0.12
gb|CB654109.1|CB654109 OSJNEc05M06.r OSJNEc Oryza sativa (j... 44 0.12
gb|CB655822.1|CB655822 OSJNEc09J11.f OSJNEc Oryza sativa (j... 44 0.12
gb|CB655823.1|CB655823 OSJNEc09J11.r OSJNEc Oryza sativa (j... 44 0.12
gb|CB666716.1|CB666716 OSJNEd13L14.r OSJNEd Oryza sativa (j... 44 0.12
gb|CB668004.1|CB668004 OSJNEd15K03.r OSJNEd Oryza sativa (j... 44 0.12
gb|CB671618.1|CB671618 OSJNEe05E12.r OSJNEe Oryza sativa (j... 44 0.12
gb|CB679495.1|CB679495 OSJNEf03B04.r OSJNEf Oryza sativa (j... 44 0.12
gb|CB679818.1|CB679818 OSJNEf03M17.r OSJNEf Oryza sativa (j... 44 0.12
gb|CB680688.1|CB680688 OSJNEf05N23.f OSJNEf Oryza sativa (j... 44 0.12
gb|CB680689.1|CB680689 OSJNEf05N23.r OSJNEf Oryza sativa (j... 44 0.12
gb|CB683255.1|CB683255 OSJNEf11G13.r OSJNEf Oryza sativa (j... 44 0.12
gb|CB683695.1|CB683695 OSJNEf12G22.f OSJNEf Oryza sativa (j... 44 0.12
gb|AF527714.1|AF527714 AF527714 Oryza sativa (japonica cult... 44 0.12
dbj|AP004686.1| Oryza sativa (japonica cultivar-group) chro... 44 0.12
dbj|AK060513.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.12
dbj|AK061830.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.12
dbj|AK063324.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.12
dbj|AK063325.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.12
dbj|AK066551.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.12
dbj|AK071953.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.12
dbj|AK099055.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.12
dbj|AK100744.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.12
dbj|AK101659.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.12
dbj|AK102415.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.12
dbj|AK102671.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.12
dbj|AK103824.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.12
dbj|AK105563.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.12
dbj|AK107156.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.12
dbj|AK108695.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.12
dbj|AK109007.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.12
dbj|AK109711.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.12
gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11... 44 0.12
gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbar... 44 0.12
gb|AC118347.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.12
gb|AC136842.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.12
gb|AC114828.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.12
dbj|AP004864.3| Oryza sativa (japonica cultivar-group) geno... 44 0.12
dbj|AP005613.2| Oryza sativa (japonica cultivar-group) geno... 44 0.12
dbj|AP005004.3| Oryza sativa (japonica cultivar-group) geno... 44 0.12
gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 ... 44 0.12
gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12... 44 0.12
ref|NT_107132.1| Oryza sativa (japonica cultivar-group) 44 0.12
dbj|AP004727.2| Oryza sativa (japonica cultivar-group) geno... 44 0.12
dbj|AP003488.3| Oryza sativa (japonica cultivar-group) geno... 44 0.12
dbj|AP003504.1| Oryza sativa (japonica cultivar-group) geno... 44 0.12
gb|AACV01001755.1| Oryza sativa (japonica cultivar-group) c... 44 0.12
gb|AACV01001757.1| Oryza sativa (japonica cultivar-group) c... 44 0.12
gb|AACV01001928.1| Oryza sativa (japonica cultivar-group) c... 44 0.12
gb|AACV01002299.1| Oryza sativa (japonica cultivar-group) c... 44 0.12
gb|AACV01002303.1| Oryza sativa (japonica cultivar-group) c... 44 0.12
gb|AACV01003715.1| Oryza sativa (japonica cultivar-group) c... 44 0.12
gb|AACV01003718.1| Oryza sativa (japonica cultivar-group) c... 44 0.12
gb|AACV01004348.1| Oryza sativa (japonica cultivar-group) c... 44 0.12
gb|AACV01006675.1| Oryza sativa (japonica cultivar-group) c... 44 0.12
gb|AACV01008244.1| Oryza sativa (japonica cultivar-group) c... 44 0.12
gb|AACV01013318.1| Oryza sativa (japonica cultivar-group) c... 44 0.12
gb|AACV01020393.1| Oryza sativa (japonica cultivar-group) c... 44 0.12
gb|AACV01022101.1| Oryza sativa (japonica cultivar-group) c... 44 0.12
gb|AACV01023525.1| Oryza sativa (japonica cultivar-group) c... 44 0.12
gb|AACV01028627.1| Oryza sativa (japonica cultivar-group) C... 44 0.12
ref|NM_191561.1| Oryza sativa (japonica cultivar-group), p... 44 0.12
ref|NM_191567.1| Oryza sativa (japonica cultivar-group), p... 44 0.12
ref|NM_192244.1| Oryza sativa (japonica cultivar-group), p... 44 0.12
ref|NM_197713.1| Oryza sativa (japonica cultivar-group) put... 44 0.12
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 44 0.12
ref|XM_463383.1| Oryza sativa (japonica cultivar-group), p... 44 0.12
ref|XM_465758.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.12
ref|NT_079854.2| Oryza sativa (japonica cultivar-group) 44 0.12
ref|NT_079873.2| Oryza sativa (japonica cultivar-group) 44 0.12
ref|NT_079914.2| Oryza sativa (japonica cultivar-group) 44 0.12
ref|NT_107179.1| Oryza sativa (japonica cultivar-group) 44 0.12
ref|XM_506805.1| PREDICTED Oryza sativa (japonica cultivar-... 44 0.12
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 44 0.12
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.12
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.12
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.12
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.12
gb|C27424.1|C27424 C27424 Rice callus cDNA Oryza sativa (ja... 42 0.46
gb|D15174.1|D15174 RICC0206A Rice callus Oryza sativa (japo... 42 0.46
gb|AU164281.1|AU164281 AU164281 Rice panicle shorter than 3... 42 0.46
gb|CB648148.1|CB648148 OSJNEb11G14.r OSJNEb Oryza sativa (j... 42 0.46
gb|AU067881.2|AU067881 AU067881 Rice callus Oryza sativa (j... 42 0.46
dbj|AP004271.1| Oryza sativa (japonica cultivar-group) chro... 42 0.46
dbj|AK064395.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.46
dbj|AK106366.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.46
dbj|AP003845.3| Oryza sativa (japonica cultivar-group) geno... 42 0.46
dbj|AP005178.3| Oryza sativa (japonica cultivar-group) geno... 42 0.46
dbj|AK121725.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.46
emb|AL732644.3|CNS08C9J Oryza sativa chromosome 12, . BAC O... 42 0.46
gb|AC131374.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.46
gb|AC119147.3| Genomic sequence for Oryza sativa, Nipponbar... 42 0.46
gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 ... 42 0.46
gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbar... 42 0.46
gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 ... 42 0.46
gb|AC145380.3| Oryza sativa chromosome 3 BAC OSJNBa0013A09 ... 42 0.46
gb|AC123523.2| Oryza sativa (japonica cultivar-group) chrom... 42 0.46
dbj|AP004798.2| Oryza sativa (japonica cultivar-group) geno... 42 0.46
dbj|AP005614.2| Oryza sativa (japonica cultivar-group) geno... 42 0.46
dbj|AP004095.3| Oryza sativa (japonica cultivar-group) geno... 42 0.46
dbj|AP004849.3| Oryza sativa (japonica cultivar-group) geno... 42 0.46
gb|AC135914.2| Oryza sativa (japonica cultivar-group) chrom... 42 0.46
dbj|AP005397.2| Oryza sativa (japonica cultivar-group) geno... 42 0.46
dbj|AP004024.3| Oryza sativa (japonica cultivar-group) geno... 42 0.46
dbj|AP004117.3| Oryza sativa (japonica cultivar-group) geno... 42 0.46
dbj|AP005093.3| Oryza sativa (japonica cultivar-group) geno... 42 0.46
dbj|AP003758.4| Oryza sativa (japonica cultivar-group) geno... 42 0.46
dbj|AP003754.5| Oryza sativa (japonica cultivar-group) geno... 42 0.46
dbj|AP006525.2| Oryza sativa (japonica cultivar-group) geno... 42 0.46
ref|NT_107140.1| Oryza sativa (japonica cultivar-group) 42 0.46
ref|NT_107143.1| Oryza sativa (japonica cultivar-group) 42 0.46
ref|NT_107148.1| Oryza sativa (japonica cultivar-group) 42 0.46
ref|NT_107231.1| Oryza sativa (japonica cultivar-group) 42 0.46
ref|NT_107238.1| Oryza sativa (japonica cultivar-group) 42 0.46
dbj|AP006070.2| Oryza sativa (japonica cultivar-group) geno... 42 0.46
dbj|AP005723.2| Oryza sativa (japonica cultivar-group) geno... 42 0.46
dbj|AP004739.3| Oryza sativa (japonica cultivar-group) geno... 42 0.46
dbj|AP004794.3| Oryza sativa (japonica cultivar-group) geno... 42 0.46
dbj|AP002914.2| Oryza sativa (japonica cultivar-group) geno... 42 0.46
gb|AACV01001845.1| Oryza sativa (japonica cultivar-group) c... 42 0.46
gb|AACV01004762.1| Oryza sativa (japonica cultivar-group) c... 42 0.46
gb|AACV01009276.1| Oryza sativa (japonica cultivar-group) c... 42 0.46
gb|AACV01009281.1| Oryza sativa (japonica cultivar-group) c... 42 0.46
gb|AACV01011018.1| Oryza sativa (japonica cultivar-group) c... 42 0.46
gb|AACV01013586.1| Oryza sativa (japonica cultivar-group) c... 42 0.46
gb|AACV01015542.1| Oryza sativa (japonica cultivar-group) c... 42 0.46
gb|AACV01015581.1| Oryza sativa (japonica cultivar-group) c... 42 0.46
gb|AACV01020395.1| Oryza sativa (japonica cultivar-group) c... 42 0.46
gb|AACV01021221.1| Oryza sativa (japonica cultivar-group) c... 42 0.46
gb|AC136227.2| Oryza sativa (japonica cultivar-group) chrom... 42 0.46
gb|AC134346.3| Oryza sativa (japonica cultivar-group) chrom... 42 0.46
dbj|AP004359.4| Oryza sativa (japonica cultivar-group) geno... 42 0.46
ref|NM_186853.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.46
ref|NM_191957.1| Oryza sativa (japonica cultivar-group), p... 42 0.46
ref|NM_192834.1| Oryza sativa (japonica cultivar-group), p... 42 0.46
ref|NM_193837.1| Oryza sativa (japonica cultivar-group), p... 42 0.46
ref|NM_193901.1| Oryza sativa (japonica cultivar-group), p... 42 0.46
ref|NM_195768.1| Oryza sativa (japonica cultivar-group) put... 42 0.46
ref|NM_195769.1| Oryza sativa (japonica cultivar-group) put... 42 0.46
ref|NT_080060.1| Oryza sativa (japonica cultivar-group) chr... 42 0.46
ref|NT_080064.1| Oryza sativa (japonica cultivar-group) chr... 42 0.46
ref|XM_464803.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.46
ref|XM_466406.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.46
ref|XM_468137.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.46
ref|XM_471794.1| Oryza sativa (japonica cultivar-group), p... 42 0.46
ref|XM_471795.1| Oryza sativa (japonica cultivar-group), p... 42 0.46
ref|XM_471848.1| Oryza sativa (japonica cultivar-group), p... 42 0.46
ref|XM_471850.1| Oryza sativa (japonica cultivar-group), p... 42 0.46
ref|XM_476066.1| Oryza sativa (japonica cultivar-group), p... 42 0.46
ref|NT_079856.2| Oryza sativa (japonica cultivar-group) 42 0.46
ref|NT_079858.2| Oryza sativa (japonica cultivar-group) 42 0.46
ref|NT_079947.2| Oryza sativa (japonica cultivar-group) 42 0.46
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 42 0.46
ref|NT_107174.1| Oryza sativa (japonica cultivar-group) 42 0.46
ref|NT_107189.1| Oryza sativa (japonica cultivar-group) 42 0.46
ref|NT_107206.1| Oryza sativa (japonica cultivar-group) 42 0.46
ref|NT_107223.1| Oryza sativa (japonica cultivar-group) 42 0.46
ref|NT_107225.1| Oryza sativa (japonica cultivar-group) 42 0.46
tpe|BN000578.1| TPA: Oryza sativa (japonica cultivar-group)... 42 0.46
dbj|AP003706.3| Oryza sativa (japonica cultivar-group) geno... 42 0.46
dbj|AP005183.3| Oryza sativa (japonica cultivar-group) geno... 42 0.46
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 42 0.46
dbj|AP003328.3| Oryza sativa (japonica cultivar-group) geno... 42 0.46
dbj|AP003536.4| Oryza sativa (japonica cultivar-group) geno... 42 0.46
gb|AC135425.3| Oryza sativa (japonica cultivar-group) chrom... 42 0.46
gb|CH401251.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.46
gb|CH401210.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.46
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.46
emb|AL662986.3|OSJN00187 Oryza sativa genomic DNA, chromoso... 42 0.46
emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromoso... 42 0.46
emb|AL731601.3|OSJN00245 Oryza sativa genomic DNA, chromoso... 42 0.46
emb|AL663022.4|OSJN00222 Oryza sativa genomic DNA, chromoso... 42 0.46
gb|AC130610.3| Oryza sativa (japonica cultivar-group) chrom... 42 0.46
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 42 0.46
gb|AC084767.11| Oryza sativa (japonica cultivar-group) chro... 42 0.46
gb|AC120527.3| Oryza sativa (japonica cultivar-group) chrom... 42 0.46
gb|AC120534.5| Oryza sativa (japonica cultivar-group) chrom... 42 0.46
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.46
>gb|CB671580.1|CB671580 OSJNEe05D17.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05D17 3', mRNA sequence
Length = 695
Score = 301 bits (152), Expect = 3e-079
Identities = 377/448 (84%), Gaps = 3/448 (0%)
Strand = Plus / Minus
Query: 4 cggcccttcctgtgggtggtccgcccg-acacccggccgctgctgccggacgggttcctg 62
||||| ||||| |||||||| || ||| ||| ||| ||||||||||||| ||||||||
Sbjct: 625 cggccgttcctctgggtggtgcggccggacagccgcgcgctgctgccggaggggttcctc 566
Query: 63 gactccgtggccgggcgcggcgcggtggtgccttggagcccccaggaccgcgtgctggcg 122
||| |||| ||||| |||||| ||||||||| |||||||||||||| | ||||| |
Sbjct: 565 gacgccgtcgccggccgcggcatggtggtgccatggagcccccaggagcaagtgctcgtc 506
Query: 123 cacccgtccaccgcctgcttcctcacgcactgcgggtggaactccaccctggagaccatc 182
||||| || || |||||||||||||||||||| |||||||| || |||||||| ||
Sbjct: 505 caccccgccgtggcgtgcttcctcacgcactgcggctggaactcgacgctggagacggtc 446
Query: 183 gcggcgggcgtgcccgtggtggccttcccgcagtggggcgaccagtgcacggacgccaag 242
|| || |||||||| |||||||| |||||||||||||| ||||||||||| ||||||| |
Sbjct: 445 gccgccggcgtgccggtggtggcgttcccgcagtggggggaccagtgcaccgacgccatg 386
Query: 243 ttcctggtggacgagctcgggatgggtgtccgcctccgcgggccgctgcggcgggacgcc 302
||||| || ||||||||||||||||| ||||||||||||| |||||||||||| | ||||
Sbjct: 385 ttcctcgtcgacgagctcgggatgggcgtccgcctccgcgcgccgctgcggcgcggcgcc 326
Query: 303 gtgcgggaggcggtggacgccgcagtggcggggcccgaggccgacgcgatgctcgccagc 362
||||| || || || |||||||| |||||||||||||| |||| |||||||| |||||
Sbjct: 325 gtgcgcgacgccgtcgacgccgccgtggcggggcccgacgccggcgcgatgcggtccagc 266
Query: 363 gccaggag-gtggagcgcggcggcgcgggaggccgtggcgcccggcgggtcctcggacgc 421
||| | || ||||||||| || ||||||| |||||||||| ||||||| || ||||||
Sbjct: 265 gcc-gcagcgtggagcgccgccgcgcgggcggccgtggcggccggcggctcgtcggaccg 207
Query: 422 gcacgtccaggcgttcgtggacgaggtg 449
||||| ||||||||||||| ||||||
Sbjct: 206 ccacgtggaggcgttcgtggaggaggtg 179
>ref|NT_107177.1| Oryza sativa (japonica cultivar-group)
Length = 1341590
Score = 301 bits (152), Expect = 3e-079
Identities = 377/448 (84%), Gaps = 3/448 (0%)
Strand = Plus / Minus
Query: 4 cggcccttcctgtgggtggtccgcccg-acacccggccgctgctgccggacgggttcctg 62
||||| ||||| |||||||| || ||| ||| ||| ||||||||||||| ||||||||
Sbjct: 261265 cggccgttcctctgggtggtgcggccggacagccgcgcgctgctgccggaggggttcctc 261206
Query: 63 gactccgtggccgggcgcggcgcggtggtgccttggagcccccaggaccgcgtgctggcg 122
||| |||| ||||| |||||| ||||||||| |||||||||||||| | ||||| |
Sbjct: 261205 gacgccgtcgccggccgcggcatggtggtgccatggagcccccaggagcaagtgctcgtc 261146
Query: 123 cacccgtccaccgcctgcttcctcacgcactgcgggtggaactccaccctggagaccatc 182
||||| || || |||||||||||||||||||| |||||||| || |||||||| ||
Sbjct: 261145 caccccgccgtggcgtgcttcctcacgcactgcggctggaactcgacgctggagacggtc 261086
Query: 183 gcggcgggcgtgcccgtggtggccttcccgcagtggggcgaccagtgcacggacgccaag 242
|| || |||||||| |||||||| |||||||||||||| ||||||||||| ||||||| |
Sbjct: 261085 gccgccggcgtgccggtggtggcgttcccgcagtggggggaccagtgcaccgacgccatg 261026
Query: 243 ttcctggtggacgagctcgggatgggtgtccgcctccgcgggccgctgcggcgggacgcc 302
||||| || ||||||||||||||||| ||||||||||||| |||||||||||| | ||||
Sbjct: 261025 ttcctcgtcgacgagctcgggatgggcgtccgcctccgcgcgccgctgcggcgcggcgcc 260966
Query: 303 gtgcgggaggcggtggacgccgcagtggcggggcccgaggccgacgcgatgctcgccagc 362
||||| || || || |||||||| |||||||||||||| |||| |||||||| |||||
Sbjct: 260965 gtgcgcgacgccgtcgacgccgccgtggcggggcccgacgccggcgcgatgcggtccagc 260906
Query: 363 gccaggag-gtggagcgcggcggcgcgggaggccgtggcgcccggcgggtcctcggacgc 421
||| | || ||||||||| || ||||||| |||||||||| ||||||| || ||||||
Sbjct: 260905 gcc-gcagcgtggagcgccgccgcgcgggcggccgtggcggccggcggctcgtcggaccg 260847
Query: 422 gcacgtccaggcgttcgtggacgaggtg 449
||||| ||||||||||||| ||||||
Sbjct: 260846 ccacgtggaggcgttcgtggaggaggtg 260819
Score = 56.0 bits (28), Expect = 3e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 139 gcttcctcacgcactgcgggtggaactc 166
||||||||||||||||||||||||||||
Sbjct: 1338594 gcttcctcacgcactgcgggtggaactc 1338567
Score = 56.0 bits (28), Expect = 3e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 139 gcttcctcacgcactgcgggtggaactc 166
||||||||||||||||||||||||||||
Sbjct: 1328208 gcttcctcacgcactgcgggtggaactc 1328181
Score = 46.1 bits (23), Expect = 0.029
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggag 176
|||||| | |||||||||||||||||||| || ||||||
Sbjct: 1149119 tgcttcgtgacgcactgcgggtggaactcgacgctggag 1149157
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1145_F01
Length = 113755
Score = 301 bits (152), Expect = 3e-079
Identities = 377/448 (84%), Gaps = 3/448 (0%)
Strand = Plus / Minus
Query: 4 cggcccttcctgtgggtggtccgcccg-acacccggccgctgctgccggacgggttcctg 62
||||| ||||| |||||||| || ||| ||| ||| ||||||||||||| ||||||||
Sbjct: 33932 cggccgttcctctgggtggtgcggccggacagccgcgcgctgctgccggaggggttcctc 33873
Query: 63 gactccgtggccgggcgcggcgcggtggtgccttggagcccccaggaccgcgtgctggcg 122
||| |||| ||||| |||||| ||||||||| |||||||||||||| | ||||| |
Sbjct: 33872 gacgccgtcgccggccgcggcatggtggtgccatggagcccccaggagcaagtgctcgtc 33813
Query: 123 cacccgtccaccgcctgcttcctcacgcactgcgggtggaactccaccctggagaccatc 182
||||| || || |||||||||||||||||||| |||||||| || |||||||| ||
Sbjct: 33812 caccccgccgtggcgtgcttcctcacgcactgcggctggaactcgacgctggagacggtc 33753
Query: 183 gcggcgggcgtgcccgtggtggccttcccgcagtggggcgaccagtgcacggacgccaag 242
|| || |||||||| |||||||| |||||||||||||| ||||||||||| ||||||| |
Sbjct: 33752 gccgccggcgtgccggtggtggcgttcccgcagtggggggaccagtgcaccgacgccatg 33693
Query: 243 ttcctggtggacgagctcgggatgggtgtccgcctccgcgggccgctgcggcgggacgcc 302
||||| || ||||||||||||||||| ||||||||||||| |||||||||||| | ||||
Sbjct: 33692 ttcctcgtcgacgagctcgggatgggcgtccgcctccgcgcgccgctgcggcgcggcgcc 33633
Query: 303 gtgcgggaggcggtggacgccgcagtggcggggcccgaggccgacgcgatgctcgccagc 362
||||| || || || |||||||| |||||||||||||| |||| |||||||| |||||
Sbjct: 33632 gtgcgcgacgccgtcgacgccgccgtggcggggcccgacgccggcgcgatgcggtccagc 33573
Query: 363 gccaggag-gtggagcgcggcggcgcgggaggccgtggcgcccggcgggtcctcggacgc 421
||| | || ||||||||| || ||||||| |||||||||| ||||||| || ||||||
Sbjct: 33572 gcc-gcagcgtggagcgccgccgcgcgggcggccgtggcggccggcggctcgtcggaccg 33514
Query: 422 gcacgtccaggcgttcgtggacgaggtg 449
||||| ||||||||||||| ||||||
Sbjct: 33513 ccacgtggaggcgttcgtggaggaggtg 33486
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 301 bits (152), Expect = 3e-079
Identities = 377/448 (84%), Gaps = 3/448 (0%)
Strand = Plus / Minus
Query: 4 cggcccttcctgtgggtggtccgcccg-acacccggccgctgctgccggacgggttcctg 62
||||| ||||| |||||||| || ||| ||| ||| ||||||||||||| ||||||||
Sbjct: 4889193 cggccgttcctctgggtggtgcggccggacagccgcgcgctgctgccggaggggttcctc 4889134
Query: 63 gactccgtggccgggcgcggcgcggtggtgccttggagcccccaggaccgcgtgctggcg 122
||| |||| ||||| |||||| ||||||||| |||||||||||||| | ||||| |
Sbjct: 4889133 gacgccgtcgccggccgcggcatggtggtgccatggagcccccaggagcaagtgctcgtc 4889074
Query: 123 cacccgtccaccgcctgcttcctcacgcactgcgggtggaactccaccctggagaccatc 182
||||| || || |||||||||||||||||||| |||||||| || |||||||| ||
Sbjct: 4889073 caccccgccgtggcgtgcttcctcacgcactgcggctggaactcgacgctggagacggtc 4889014
Query: 183 gcggcgggcgtgcccgtggtggccttcccgcagtggggcgaccagtgcacggacgccaag 242
|| || |||||||| |||||||| |||||||||||||| ||||||||||| ||||||| |
Sbjct: 4889013 gccgccggcgtgccggtggtggcgttcccgcagtggggggaccagtgcaccgacgccatg 4888954
Query: 243 ttcctggtggacgagctcgggatgggtgtccgcctccgcgggccgctgcggcgggacgcc 302
||||| || ||||||||||||||||| ||||||||||||| |||||||||||| | ||||
Sbjct: 4888953 ttcctcgtcgacgagctcgggatgggcgtccgcctccgcgcgccgctgcggcgcggcgcc 4888894
Query: 303 gtgcgggaggcggtggacgccgcagtggcggggcccgaggccgacgcgatgctcgccagc 362
||||| || || || |||||||| |||||||||||||| |||| |||||||| |||||
Sbjct: 4888893 gtgcgcgacgccgtcgacgccgccgtggcggggcccgacgccggcgcgatgcggtccagc 4888834
Query: 363 gccaggag-gtggagcgcggcggcgcgggaggccgtggcgcccggcgggtcctcggacgc 421
||| | || ||||||||| || ||||||| |||||||||| ||||||| || ||||||
Sbjct: 4888833 gcc-gcagcgtggagcgccgccgcgcgggcggccgtggcggccggcggctcgtcggaccg 4888775
Query: 422 gcacgtccaggcgttcgtggacgaggtg 449
||||| ||||||||||||| ||||||
Sbjct: 4888774 ccacgtggaggcgttcgtggaggaggtg 4888747
Score = 56.0 bits (28), Expect = 3e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 139 gcttcctcacgcactgcgggtggaactc 166
||||||||||||||||||||||||||||
Sbjct: 5966522 gcttcctcacgcactgcgggtggaactc 5966495
Score = 56.0 bits (28), Expect = 3e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 139 gcttcctcacgcactgcgggtggaactc 166
||||||||||||||||||||||||||||
Sbjct: 5956136 gcttcctcacgcactgcgggtggaactc 5956109
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 141 ttcctcacgcactgcgggtggaactccaccctggaga 177
||||| |||||||||||||||||||| || |||||||
Sbjct: 31810914 ttcctgacgcactgcgggtggaactcgacgctggaga 31810878
Score = 46.1 bits (23), Expect = 0.029
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggag 176
|||| ||||||||||||||| |||||||| || ||||||
Sbjct: 25442512 tgctacctcacgcactgcggctggaactcgacgctggag 25442474
Score = 46.1 bits (23), Expect = 0.029
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggag 176
|||||| | |||||||||||||||||||| || ||||||
Sbjct: 5777047 tgcttcgtgacgcactgcgggtggaactcgacgctggag 5777085
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 141 ttcctcacgcactgcgggtggaactc 166
||||| ||||||||||||||||||||
Sbjct: 17219934 ttcctgacgcactgcgggtggaactc 17219959
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 148 cgcactgcgggtggaactccaccctggaga 177
||||||||||||||||||| || |||||||
Sbjct: 8091777 cgcactgcgggtggaactcgacgctggaga 8091748
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 148 cgcactgcgggtggaactccaccctggaga 177
||||||||||||||||||| || |||||||
Sbjct: 8075437 cgcactgcgggtggaactcgacgctggaga 8075408
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 148 cgcactgcgggtggaactccaccctggaga 177
||||||||||||||||||| || |||||||
Sbjct: 8017643 cgcactgcgggtggaactcgacgctggaga 8017614
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 33285808 gcgcggcggcgcgggaggccg 33285828
Score = 42.1 bits (21), Expect = 0.46
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 141 ttcctcacgcactgcgggtggaactccaccctggaga 177
||||| |||||| ||||||||||||| || |||||||
Sbjct: 22223357 ttcctgacgcacagcgggtggaactcgacgctggaga 22223393
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 12642445 gcgcggcggcgcgggaggccg 12642425
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 8271293 gcgcggcggcgcgggaggccg 8271273
>gb|CB646316.1|CB646316 OSJNEb08L08.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb08L08 3', mRNA sequence
Length = 634
Score = 291 bits (147), Expect = 3e-076
Identities = 347/411 (84%), Gaps = 2/411 (0%)
Strand = Plus / Minus
Query: 40 cgctgctgccggacgggttcctggactccgtggccgggcgcggcgcggtggtgccttgga 99
||||||||||||| |||||||| ||| |||| ||||| |||||| ||||||||| ||||
Sbjct: 610 cgctgctgccggaggggttcctcgacgccgtcgccggccgcggcatggtggtgccatgga 551
Query: 100 gcccccaggaccgcgtgctggcgcacccgtccaccgcctgcttcctcacgcactgcgggt 159
|||||||||| | ||||| | ||||| || || |||||||||||||||||||| |
Sbjct: 550 gcccccaggagcaagtgctcgtccaccccgccgtggcgtgcttcctcacgcactgcggct 491
Query: 160 ggaactccaccctggagaccatcgcggcgggcgtgcccgtggtggccttcccgcagtggg 219
||||||| || |||||||| |||| || |||||||| |||||||| |||||||||||||
Sbjct: 490 ggaactcgacgctggagacggtcgccgccggcgtgccggtggtggcgttcccgcagtggg 431
Query: 220 gcgaccagtgcacggacgccaagttcctggtggacgagctcgggatgggtgtccgcctcc 279
| ||||||||||| ||||||| |||||| || ||||||||||||||||| ||||||||||
Sbjct: 430 gggaccagtgcaccgacgccatgttcctcgtcgacgagctcgggatgggcgtccgcctcc 371
Query: 280 gcgggccgctgcggcgggacgccgtgcgggaggcggtggacgccgcagtggcggggcccg 339
||| |||| ||||||| | ||||||||| || || || |||||||| |||||||||||||
Sbjct: 370 gcgcgccgttgcggcgcggcgccgtgcgcgacgccgtcgacgccgccgtggcggggcccg 311
Query: 340 aggccgacgcgatgctcgccagcgccaggag-gtggagcgcggcggcgcgggaggccgtg 398
| |||| |||||||| |||||||| | || ||||||||| || ||||||| |||||||
Sbjct: 310 acgccggcgcgatgcggtccagcgcc-gcagcgtggagcgccgccgcgcgggcggccgtg 252
Query: 399 gcgcccggcgggtcctcggacgcgcacgtccaggcgttcgtggacgaggtg 449
||| ||||||| || |||||| ||||| ||||||||||||| ||||||
Sbjct: 251 gcggccggcggctcgtcggaccgccacgtggaggcgttcgtggaggaggtg 201
>dbj|AK105236.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-A01, full
insert sequence
Length = 1615
Score = 194 bits (98), Expect = 5e-047
Identities = 231/274 (84%), Gaps = 1/274 (0%)
Strand = Plus / Plus
Query: 4 cggcccttcctgtgggtggtccgcccg-acacccggccgctgctgccggacgggttcctg 62
||||| ||||| |||||||| || ||| ||| ||| ||||||||||||| ||||||||
Sbjct: 1077 cggccgttcctctgggtggtgcggccggacagccgcgcgctgctgccggaggggttcctc 1136
Query: 63 gactccgtggccgggcgcggcgcggtggtgccttggagcccccaggaccgcgtgctggcg 122
||| |||| ||||| |||||| ||||||||| |||||||||||||| | ||||| |
Sbjct: 1137 gacgccgtcgccggccgcggcatggtggtgccatggagcccccaggagcaagtgctcgtc 1196
Query: 123 cacccgtccaccgcctgcttcctcacgcactgcgggtggaactccaccctggagaccatc 182
||||| || || |||||||||||||||||||| |||||||| || |||||||| ||
Sbjct: 1197 caccccgccgtggcgtgcttcctcacgcactgcggctggaactcgacgctggagacggtc 1256
Query: 183 gcggcgggcgtgcccgtggtggccttcccgcagtggggcgaccagtgcacggacgccaag 242
|| || |||||||| |||||||| |||||||||||||| ||||||||||| ||||||| |
Sbjct: 1257 gccgccggcgtgccggtggtggcgttcccgcagtggggggaccagtgcaccgacgccatg 1316
Query: 243 ttcctggtggacgagctcgggatgggtgtccgcc 276
||||| || ||||||||||||||||| |||||||
Sbjct: 1317 ttcctcgtcgacgagctcgggatgggcgtccgcc 1350
>ref|XM_464391.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1615
Score = 194 bits (98), Expect = 5e-047
Identities = 231/274 (84%), Gaps = 1/274 (0%)
Strand = Plus / Plus
Query: 4 cggcccttcctgtgggtggtccgcccg-acacccggccgctgctgccggacgggttcctg 62
||||| ||||| |||||||| || ||| ||| ||| ||||||||||||| ||||||||
Sbjct: 1077 cggccgttcctctgggtggtgcggccggacagccgcgcgctgctgccggaggggttcctc 1136
Query: 63 gactccgtggccgggcgcggcgcggtggtgccttggagcccccaggaccgcgtgctggcg 122
||| |||| ||||| |||||| ||||||||| |||||||||||||| | ||||| |
Sbjct: 1137 gacgccgtcgccggccgcggcatggtggtgccatggagcccccaggagcaagtgctcgtc 1196
Query: 123 cacccgtccaccgcctgcttcctcacgcactgcgggtggaactccaccctggagaccatc 182
||||| || || |||||||||||||||||||| |||||||| || |||||||| ||
Sbjct: 1197 caccccgccgtggcgtgcttcctcacgcactgcggctggaactcgacgctggagacggtc 1256
Query: 183 gcggcgggcgtgcccgtggtggccttcccgcagtggggcgaccagtgcacggacgccaag 242
|| || |||||||| |||||||| |||||||||||||| ||||||||||| ||||||| |
Sbjct: 1257 gccgccggcgtgccggtggtggcgttcccgcagtggggggaccagtgcaccgacgccatg 1316
Query: 243 ttcctggtggacgagctcgggatgggtgtccgcc 276
||||| || ||||||||||||||||| |||||||
Sbjct: 1317 ttcctcgtcgacgagctcgggatgggcgtccgcc 1350
>gb|CB643541.1|CB643541 OSJNEb04E12.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb04E12 3', mRNA sequence
Length = 570
Score = 172 bits (87), Expect = 2e-040
Identities = 206/243 (84%), Gaps = 2/243 (0%)
Strand = Plus / Minus
Query: 208 tcccgcagtggggcgaccagtgcacggacgccaagttcctggtggacgagctcgggatgg 267
||||||||||||| | ||||||||| ||||||| |||||| || ||||||||||||||||
Sbjct: 570 tcccgcagtggggggcccagtgcaccgacgccatgttcctcgtcgacgagctcgggatgg 511
Query: 268 gtgtccgcctccgcgggccgctgcggcgggacgccgtgcgggaggcggtggacgccgcag 327
| ||||||||||||| |||||||||||| | ||||||||| || || || | |||||| |
Sbjct: 510 gcgtccgcctccgcgcgccgctgcggcgcggcgccgtgcgcgacgccgtcgtcgccgccg 451
Query: 328 tggcggggcccgaggccgacgcgatgctcgccagcgccaggag-gtggagcgcggcggcg 386
||||||||||||| |||| |||||||| |||||||| | || ||||||||| || |||
Sbjct: 450 tggcggggcccgacgccggcgcgatgcggtccagcgcc-gcagcgtggagcgccgccgcg 392
Query: 387 cgggaggccgtggcgcccggcgggtcctcggacgcgcacgtccaggcgttcgtggacgag 446
|||| |||||||||| ||||||| || |||||| | ||| ||||||||||||| |||
Sbjct: 391 cgggcggccgtggcggccggcggctcgtcggaccgccccgtggaggcgttcgtggaggag 332
Query: 447 gtg 449
|||
Sbjct: 331 gtg 329
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete
sequence
Length = 123406
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 96 tggagcccccaggaccgcgtgctggcgcacccgtccaccgcctgcttcctcacgcactgc 155
|||||||||||| | |||||||||||||| |||||| |||||| |||||||||||
Sbjct: 63938 tggagcccccagctcgacgtgctggcgcaccgcgccaccgggtgcttcgtcacgcactgc 63879
Query: 156 gggtggaactccaccctggag 176
|| ||||||||||||||||||
Sbjct: 63878 ggctggaactccaccctggag 63858
>gb|AACV01007694.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007694, whole
genome shotgun sequence
Length = 25065
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 96 tggagcccccaggaccgcgtgctggcgcacccgtccaccgcctgcttcctcacgcactgc 155
|||||||||||| | |||||||||||||| |||||| |||||| |||||||||||
Sbjct: 15154 tggagcccccagctcgacgtgctggcgcaccgcgccaccgggtgcttcgtcacgcactgc 15213
Query: 156 gggtggaactccaccctggag 176
|| ||||||||||||||||||
Sbjct: 15214 ggctggaactccaccctggag 15234
>ref|XM_469348.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1515
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 96 tggagcccccaggaccgcgtgctggcgcacccgtccaccgcctgcttcctcacgcactgc 155
|||||||||||| | |||||||||||||| |||||| |||||| |||||||||||
Sbjct: 1024 tggagcccccagctcgacgtgctggcgcaccgcgccaccgggtgcttcgtcacgcactgc 1083
Query: 156 gggtggaactccaccctggag 176
|| ||||||||||||||||||
Sbjct: 1084 ggctggaactccaccctggag 1104
>ref|NT_079916.2| Oryza sativa (japonica cultivar-group)
Length = 3914802
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 96 tggagcccccaggaccgcgtgctggcgcacccgtccaccgcctgcttcctcacgcactgc 155
|||||||||||| | |||||||||||||| |||||| |||||| |||||||||||
Sbjct: 788296 tggagcccccagctcgacgtgctggcgcaccgcgccaccgggtgcttcgtcacgcactgc 788355
Query: 156 gggtggaactccaccctggag 176
|| ||||||||||||||||||
Sbjct: 788356 ggctggaactccaccctggag 788376
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 375 agcgcggcggcgcgggaggccg 396
||||||||||||||||||||||
Sbjct: 3030461 agcgcggcggcgcgggaggccg 3030482
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 2633932 gcgcggcggcgcgggaggccg 2633912
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 96 tggagcccccaggaccgcgtgctggcgcacccgtccaccgcctgcttcctcacgcactgc 155
|||||||||||| | |||||||||||||| |||||| |||||| |||||||||||
Sbjct: 1236167 tggagcccccagctcgacgtgctggcgcaccgcgccaccgggtgcttcgtcacgcactgc 1236226
Query: 156 gggtggaactccaccctggag 176
|| ||||||||||||||||||
Sbjct: 1236227 ggctggaactccaccctggag 1236247
Score = 58.0 bits (29), Expect = 8e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 111 cgcgtgctggcgcacccgtccaccgcctgcttcctcacgcactgcgggtggaactcc 167
||||||||||||||| ||||||| || |||||| || | |||||||| |||||||||
Sbjct: 4633207 cgcgtgctggcgcacgcgtccacggcgtgcttcgtctcccactgcggctggaactcc 4633151
Score = 46.1 bits (23), Expect = 0.029
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 112 gcgtgctggcgcacccgtccaccgcctgcttcctcacgcactgcgggtggaactc 166
||||||| |||||||||| | ||| |||||| | |||||||||||||||||||
Sbjct: 4641143 gcgtgctctcgcacccgtcgatcgcatgcttcgtgtcgcactgcgggtggaactc 4641197
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 8799942 acgcactgcgggtggaactcgacgctggag 8799913
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 96 tggagcccccaggaccgcgtgctggcgcacccgtccaccgcctgcttcctcacgcactgc 155
|||||||||||| | |||||||||||||| |||||| |||||| |||||||||||
Sbjct: 28502330 tggagcccccagctcgacgtgctggcgcaccgcgccaccgggtgcttcgtcacgcactgc 28502389
Query: 156 gggtggaactccaccctggag 176
|| ||||||||||||||||||
Sbjct: 28502390 ggctggaactccaccctggag 28502410
Score = 58.0 bits (29), Expect = 8e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 111 cgcgtgctggcgcacccgtccaccgcctgcttcctcacgcactgcgggtggaactcc 167
||||||||||||||| ||||||| || |||||| || | |||||||| |||||||||
Sbjct: 31899370 cgcgtgctggcgcacgcgtccacggcgtgcttcgtctcccactgcggctggaactcc 31899314
Score = 46.1 bits (23), Expect = 0.029
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 112 gcgtgctggcgcacccgtccaccgcctgcttcctcacgcactgcgggtggaactc 166
||||||| |||||||||| | ||| |||||| | |||||||||||||||||||
Sbjct: 31907306 gcgtgctctcgcacccgtcgatcgcatgcttcgtgtcgcactgcgggtggaactc 31907360
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 36066105 acgcactgcgggtggaactcgacgctggag 36066076
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 14415558 acgcactgcgggtggaactcgacgctggag 14415587
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 96 tggagcccccaggaccgcgtgctggcgcacccgtccaccgcctgcttcctcacgcactgc 155
|||||||||||| | |||||||||||||| |||||| |||||| |||||||||||
Sbjct: 27577899 tggagcccccagctcgacgtgctggcgcaccgcgccaccgggtgcttcgtcacgcactgc 27577958
Query: 156 gggtggaactccaccctggag 176
|| ||||||||||||||||||
Sbjct: 27577959 ggctggaactccaccctggag 27577979
Score = 58.0 bits (29), Expect = 8e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 111 cgcgtgctggcgcacccgtccaccgcctgcttcctcacgcactgcgggtggaactcc 167
||||||||||||||| ||||||| || |||||| || | |||||||| |||||||||
Sbjct: 31079049 cgcgtgctggcgcacgcgtccacggcgtgcttcgtctcccactgcggctggaactcc 31078993
Score = 46.1 bits (23), Expect = 0.029
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 112 gcgtgctggcgcacccgtccaccgcctgcttcctcacgcactgcgggtggaactc 166
||||||| |||||||||| | ||| |||||| | |||||||||||||||||||
Sbjct: 31086982 gcgtgctctcgcacccgtcgatcgcatgcttcgtgtcgcactgcgggtggaactc 31087036
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 35167107 acgcactgcgggtggaactcgacgctggag 35167078
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 375 agcgcggcggcgcgggaggccg 396
||||||||||||||||||||||
Sbjct: 29816718 agcgcggcggcgcgggaggccg 29816739
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 13750279 acgcactgcgggtggaactcgacgctggag 13750308
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 35550420 gcgcggcggcgcgggaggccg 35550440
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 29420189 gcgcggcggcgcgggaggccg 29420169
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 20068825 gcgcggcggcgcgggaggccg 20068805
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 15423165 gcgcggcggcgcgggaggccg 15423185
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 15423120 gcgcggcggcgcgggaggccg 15423140
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 4996033 gcgcggcggcgcgggaggccg 4996013
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 73.8 bits (37), Expect = 1e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 96 tggagcccccaggaccgcgtgctggcgcacccgtccaccgcctgcttcctcacgcactgc 155
|||||||||||| | |||||||||||||| |||||| |||||| |||||||||||
Sbjct: 27486576 tggagcccccagctcgacgtgctggcgcaccgcgccaccgggtgcttcgtcacgcactgc 27486635
Query: 156 gggtggaactccaccctggag 176
|| ||||||||||||||||||
Sbjct: 27486636 ggctggaactccaccctggag 27486656
Score = 58.0 bits (29), Expect = 8e-006
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 111 cgcgtgctggcgcacccgtccaccgcctgcttcctcacgcactgcgggtggaactcc 167
||||||||||||||| ||||||| || |||||| || | |||||||| |||||||||
Sbjct: 30988526 cgcgtgctggcgcacgcgtccacggcgtgcttcgtctcccactgcggctggaactcc 30988470
Score = 46.1 bits (23), Expect = 0.029
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 112 gcgtgctggcgcacccgtccaccgcctgcttcctcacgcactgcgggtggaactc 166
||||||| |||||||||| | ||| |||||| | |||||||||||||||||||
Sbjct: 30996459 gcgtgctctcgcacccgtcgatcgcatgcttcgtgtcgcactgcgggtggaactc 30996513
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 35077035 acgcactgcgggtggaactcgacgctggag 35077006
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 375 agcgcggcggcgcgggaggccg 396
||||||||||||||||||||||
Sbjct: 29725296 agcgcggcggcgcgggaggccg 29725317
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 13755304 acgcactgcgggtggaactcgacgctggag 13755333
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 35460348 gcgcggcggcgcgggaggccg 35460368
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 29328767 gcgcggcggcgcgggaggccg 29328747
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 20075797 gcgcggcggcgcgggaggccg 20075777
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 15428631 gcgcggcggcgcgggaggccg 15428651
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 15428586 gcgcggcggcgcgggaggccg 15428606
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 4996818 gcgcggcggcgcgggaggccg 4996798
>dbj|AK108846.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-A02, full
insert sequence
Length = 1895
Score = 67.9 bits (34), Expect = 8e-009
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 148 cgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcccgtggtggc 205
||||||||||||||||||| || ||||||||| | |||||||||||||| |||||||
Sbjct: 1185 cgcactgcgggtggaactcgacgctggagaccgtggcggcgggcgtgccgatggtggc 1242
>dbj|AP002843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0407B12
Length = 148762
Score = 67.9 bits (34), Expect = 8e-009
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 148 cgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcccgtggtggc 205
||||||||||||||||||| || ||||||||| | |||||||||||||| |||||||
Sbjct: 104964 cgcactgcgggtggaactcgacgctggagaccgtggcggcgggcgtgccgatggtggc 105021
Score = 42.1 bits (21), Expect = 0.46
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 148 cgcactgcgggtggaactccaccctggag 176
||||||||||||||||||| || ||||||
Sbjct: 77195 cgcactgcgggtggaactcgacgctggag 77167
>gb|AACV01001848.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001848, whole
genome shotgun sequence
Length = 5116
Score = 67.9 bits (34), Expect = 8e-009
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 148 cgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcccgtggtggc 205
||||||||||||||||||| || ||||||||| | |||||||||||||| |||||||
Sbjct: 1256 cgcactgcgggtggaactcgacgctggagaccgtggcggcgggcgtgccgatggtggc 1313
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 67.9 bits (34), Expect = 8e-009
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 148 cgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcccgtggtggc 205
||||||||||||||||||| || ||||||||| | |||||||||||||| |||||||
Sbjct: 24815104 cgcactgcgggtggaactcgacgctggagaccgtggcggcgggcgtgccgatggtggc 24815161
Score = 52.0 bits (26), Expect = 5e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 137 ctgcttcctcacgcactgcgggtggaactccacc 170
||||||| | ||||||||||||||||||||||||
Sbjct: 28382739 ctgcttcgtgacgcactgcgggtggaactccacc 28382772
Score = 52.0 bits (26), Expect = 5e-004
Identities = 95/118 (80%)
Strand = Plus / Plus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgccc 197
|||||| | |||||||||||||||||||| ||| |||| | | ||||||||||||||
Sbjct: 28378264 tgcttcgtgacgcactgcgggtggaactcgaccacggaggcgctggcggcgggcgtgccg 28378323
Query: 198 gtggtggccttcccgcagtggggcgaccagtgcacggacgccaagttcctggtggacg 255
|| || |||| |||| |||| ||||||| ||| |||||||||| |||| |||||
Sbjct: 28378324 gtcgtcgcctacccggcgtggtccgaccagatcaccaacgccaagttactggcggacg 28378381
Score = 48.1 bits (24), Expect = 0.007
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 145 tcacgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||||| || ||||||
Sbjct: 30786605 tcacgcactgcgggtggaactcgacgctggag 30786574
Score = 48.1 bits (24), Expect = 0.007
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 121 cgcacccgtccaccgcctgcttcctcacgcactgcgggtggaactccaccctggagacca 180
|||||||| |||||| | | ||||| || ||||||||||||||| || | |||||| |||
Sbjct: 3911983 cgcacccggccaccggcgggttcctgacccactgcgggtggaacgccgcgctggaggcca 3911924
Query: 181 tcgc 184
||||
Sbjct: 3911923 tcgc 3911920
Score = 46.1 bits (23), Expect = 0.029
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 376 gcgcggcggcgcgggaggccgtg 398
|||||||||||||||||||||||
Sbjct: 41831286 gcgcggcggcgcgggaggccgtg 41831264
Score = 46.1 bits (23), Expect = 0.029
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 145 tcacgcactgcgggtggaactcc 167
|||||||||||||||||||||||
Sbjct: 25690908 tcacgcactgcgggtggaactcc 25690930
Score = 46.1 bits (23), Expect = 0.029
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggag 176
|||||| | |||||||||||||||||||| || ||||||
Sbjct: 4150317 tgcttcgtgacgcactgcgggtggaactcgacgctggag 4150279
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 30764263 acgcactgcgggtggaactcgacgctggag 30764234
Score = 44.1 bits (22), Expect = 0.12
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcc 196
|||||||||||||||||||| | |||||| |||| ||||||| |||||
Sbjct: 30730443 acgcactgcgggtggaactcggcgctggagggcatcacggcgggggtgcc 30730492
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 25673579 acgcactgcgggtggaactcgacgctggag 25673608
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 23539648 acgcactgcgggtggaactcgacgctggag 23539677
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 23532105 acgcactgcgggtggaactcgacgctggag 23532134
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 27592256 gcgcggcggcgcgggaggccg 27592236
Score = 42.1 bits (21), Expect = 0.46
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 148 cgcactgcgggtggaactccaccctggag 176
||||||||||||||||||| || ||||||
Sbjct: 24787335 cgcactgcgggtggaactcgacgctggag 24787307
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 15788283 gcgcggcggcgcgggaggccg 15788263
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 15249157 gcgcggcggcgcgggaggccg 15249177
>ref|NM_192840.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1524
Score = 67.9 bits (34), Expect = 8e-009
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 148 cgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcccgtggtggc 205
||||||||||||||||||| || ||||||||| | |||||||||||||| |||||||
Sbjct: 1121 cgcactgcgggtggaactcgacgctggagaccgtggcggcgggcgtgccgatggtggc 1178
>ref|NT_079926.2| Oryza sativa (japonica cultivar-group)
Length = 8469246
Score = 67.9 bits (34), Expect = 8e-009
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 148 cgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcccgtggtggc 205
||||||||||||||||||| || ||||||||| | |||||||||||||| |||||||
Sbjct: 7733336 cgcactgcgggtggaactcgacgctggagaccgtggcggcgggcgtgccgatggtggc 7733393
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 6457880 acgcactgcgggtggaactcgacgctggag 6457909
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 6450337 acgcactgcgggtggaactcgacgctggag 6450366
Score = 42.1 bits (21), Expect = 0.46
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 148 cgcactgcgggtggaactccaccctggag 176
||||||||||||||||||| || ||||||
Sbjct: 7705567 cgcactgcgggtggaactcgacgctggag 7705539
>gb|CH401166.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000003 genomic
scaffold, whole genome shotgun sequence
Length = 8539496
Score = 67.9 bits (34), Expect = 8e-009
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 148 cgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcccgtggtggc 205
||||||||||||||||||| || ||||||||| | |||||||||||||| |||||||
Sbjct: 7723261 cgcactgcgggtggaactcgacgctggagaccgtggcggcgggcgtgccgatggtggc 7723318
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 6395913 acgcactgcgggtggaactcgacgctggag 6395942
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 6386524 acgcactgcgggtggaactcgacgctggag 6386553
Score = 42.1 bits (21), Expect = 0.46
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 148 cgcactgcgggtggaactccaccctggag 176
||||||||||||||||||| || ||||||
Sbjct: 7695153 cgcactgcgggtggaactcgacgctggag 7695125
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 67.9 bits (34), Expect = 8e-009
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 148 cgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcccgtggtggc 205
||||||||||||||||||| || ||||||||| | |||||||||||||| |||||||
Sbjct: 24348384 cgcactgcgggtggaactcgacgctggagaccgtggcggcgggcgtgccgatggtggc 24348441
Score = 52.0 bits (26), Expect = 5e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 137 ctgcttcctcacgcactgcgggtggaactccacc 170
||||||| | ||||||||||||||||||||||||
Sbjct: 27964913 ctgcttcgtgacgcactgcgggtggaactccacc 27964946
Score = 52.0 bits (26), Expect = 5e-004
Identities = 95/118 (80%)
Strand = Plus / Plus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgccc 197
|||||| | |||||||||||||||||||| ||| |||| | | ||||||||||||||
Sbjct: 27960433 tgcttcgtgacgcactgcgggtggaactcgaccacggaggcgctggcggcgggcgtgccg 27960492
Query: 198 gtggtggccttcccgcagtggggcgaccagtgcacggacgccaagttcctggtggacg 255
|| || |||| |||| |||| ||||||| ||| |||||||||| |||| |||||
Sbjct: 27960493 gtcgtcgcctacccggcgtggtccgaccagatcaccaacgccaagttactggcggacg 27960550
Score = 48.1 bits (24), Expect = 0.007
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 145 tcacgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||||| || ||||||
Sbjct: 30331458 tcacgcactgcgggtggaactcgacgctggag 30331427
Score = 48.1 bits (24), Expect = 0.007
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 121 cgcacccgtccaccgcctgcttcctcacgcactgcgggtggaactccaccctggagacca 180
|||||||| |||||| | | ||||| || ||||||||||||||| || | |||||| |||
Sbjct: 3949557 cgcacccggccaccggcgggttcctgacccactgcgggtggaacgccgcgctggaggcca 3949498
Query: 181 tcgc 184
||||
Sbjct: 3949497 tcgc 3949494
Score = 46.1 bits (23), Expect = 0.029
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 145 tcacgcactgcgggtggaactcc 167
|||||||||||||||||||||||
Sbjct: 25382718 tcacgcactgcgggtggaactcc 25382740
Score = 46.1 bits (23), Expect = 0.029
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggag 176
|||||| | |||||||||||||||||||| || ||||||
Sbjct: 4190040 tgcttcgtgacgcactgcgggtggaactcgacgctggag 4190002
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 30325780 acgcactgcgggtggaactcgacgctggag 30325751
Score = 44.1 bits (22), Expect = 0.12
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcc 196
|||||||||||||||||||| | |||||| |||| ||||||| |||||
Sbjct: 30292575 acgcactgcgggtggaactcggcgctggagggcatcacggcgggggtgcc 30292624
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 25342360 acgcactgcgggtggaactcgacgctggag 25342389
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 23021036 acgcactgcgggtggaactcgacgctggag 23021065
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 23011647 acgcactgcgggtggaactcgacgctggag 23011676
Score = 42.1 bits (21), Expect = 0.46
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 148 cgcactgcgggtggaactccaccctggag 176
||||||||||||||||||| || ||||||
Sbjct: 24320276 cgcactgcgggtggaactcgacgctggag 24320248
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 67.9 bits (34), Expect = 8e-009
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 148 cgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcccgtggtggc 205
||||||||||||||||||| || ||||||||| | |||||||||||||| |||||||
Sbjct: 24736387 cgcactgcgggtggaactcgacgctggagaccgtggcggcgggcgtgccgatggtggc 24736444
Score = 52.0 bits (26), Expect = 5e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 137 ctgcttcctcacgcactgcgggtggaactccacc 170
||||||| | ||||||||||||||||||||||||
Sbjct: 28302069 ctgcttcgtgacgcactgcgggtggaactccacc 28302102
Score = 52.0 bits (26), Expect = 5e-004
Identities = 95/118 (80%)
Strand = Plus / Plus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgccc 197
|||||| | |||||||||||||||||||| ||| |||| | | ||||||||||||||
Sbjct: 28297594 tgcttcgtgacgcactgcgggtggaactcgaccacggaggcgctggcggcgggcgtgccg 28297653
Query: 198 gtggtggccttcccgcagtggggcgaccagtgcacggacgccaagttcctggtggacg 255
|| || |||| |||| |||| ||||||| ||| |||||||||| |||| |||||
Sbjct: 28297654 gtcgtcgcctacccggcgtggtccgaccagatcaccaacgccaagttactggcggacg 28297711
Score = 48.1 bits (24), Expect = 0.007
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 145 tcacgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||||| || ||||||
Sbjct: 30705935 tcacgcactgcgggtggaactcgacgctggag 30705904
Score = 48.1 bits (24), Expect = 0.007
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 121 cgcacccgtccaccgcctgcttcctcacgcactgcgggtggaactccaccctggagacca 180
|||||||| |||||| | | ||||| || ||||||||||||||| || | |||||| |||
Sbjct: 3914181 cgcacccggccaccggcgggttcctgacccactgcgggtggaacgccgcgctggaggcca 3914122
Query: 181 tcgc 184
||||
Sbjct: 3914121 tcgc 3914118
Score = 46.1 bits (23), Expect = 0.029
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 376 gcgcggcggcgcgggaggccgtg 398
|||||||||||||||||||||||
Sbjct: 41750616 gcgcggcggcgcgggaggccgtg 41750594
Score = 46.1 bits (23), Expect = 0.029
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 145 tcacgcactgcgggtggaactcc 167
|||||||||||||||||||||||
Sbjct: 25610688 tcacgcactgcgggtggaactcc 25610710
Score = 46.1 bits (23), Expect = 0.029
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggag 176
|||||| | |||||||||||||||||||| || ||||||
Sbjct: 4152515 tgcttcgtgacgcactgcgggtggaactcgacgctggag 4152477
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 30683593 acgcactgcgggtggaactcgacgctggag 30683564
Score = 44.1 bits (22), Expect = 0.12
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcc 196
|||||||||||||||||||| | |||||| |||| ||||||| |||||
Sbjct: 30649773 acgcactgcgggtggaactcggcgctggagggcatcacggcgggggtgcc 30649822
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 25593359 acgcactgcgggtggaactcgacgctggag 25593388
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 23460931 acgcactgcgggtggaactcgacgctggag 23460960
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 23453388 acgcactgcgggtggaactcgacgctggag 23453417
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 27511586 gcgcggcggcgcgggaggccg 27511566
Score = 42.1 bits (21), Expect = 0.46
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 148 cgcactgcgggtggaactccaccctggag 176
||||||||||||||||||| || ||||||
Sbjct: 24708618 cgcactgcgggtggaactcgacgctggag 24708590
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 15790501 gcgcggcggcgcgggaggccg 15790481
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 15251375 gcgcggcggcgcgggaggccg 15251395
>dbj|AK108674.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-H12, full
insert sequence
Length = 1783
Score = 65.9 bits (33), Expect = 3e-008
Identities = 96/117 (82%)
Strand = Plus / Plus
Query: 137 ctgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcc 196
||||||| | |||||||||||||||||||||| | ||||| | |||| |||||||||||
Sbjct: 1184 ctgcttcgtgacgcactgcgggtggaactccatcatggaggcgctcgccgcgggcgtgcc 1243
Query: 197 cgtggtggccttcccgcagtggggcgaccagtgcacggacgccaagttcctggtgga 253
||||| | | |||| |||| |||||||| | || ||||||||||| |||||||
Sbjct: 1244 ggtggtcgggtacccgtggtggtccgaccagttcgcgaacgccaagttcttggtgga 1300
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23,
complete sequence
Length = 191765
Score = 65.9 bits (33), Expect = 3e-008
Identities = 96/117 (82%)
Strand = Plus / Minus
Query: 137 ctgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcc 196
||||||| | |||||||||||||||||||||| | ||||| | |||| |||||||||||
Sbjct: 141054 ctgcttcgtgacgcactgcgggtggaactccatcatggaggcgctcgccgcgggcgtgcc 140995
Query: 197 cgtggtggccttcccgcagtggggcgaccagtgcacggacgccaagttcctggtgga 253
||||| | | |||| |||| |||||||| | || ||||||||||| |||||||
Sbjct: 140994 ggtggtcgggtacccgtggtggtccgaccagttcgcgaacgccaagttcttggtgga 140938
>gb|AACV01012676.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012676, whole
genome shotgun sequence
Length = 33360
Score = 65.9 bits (33), Expect = 3e-008
Identities = 96/117 (82%)
Strand = Plus / Plus
Query: 137 ctgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcc 196
||||||| | |||||||||||||||||||||| | ||||| | |||| |||||||||||
Sbjct: 27894 ctgcttcgtgacgcactgcgggtggaactccatcatggaggcgctcgccgcgggcgtgcc 27953
Query: 197 cgtggtggccttcccgcagtggggcgaccagtgcacggacgccaagttcctggtgga 253
||||| | | |||| |||| |||||||| | || ||||||||||| |||||||
Sbjct: 27954 ggtggtcgggtacccgtggtggtccgaccagttcgcgaacgccaagttcttggtgga 28010
>ref|NT_107220.1| Oryza sativa (japonica cultivar-group)
Length = 436435
Score = 65.9 bits (33), Expect = 3e-008
Identities = 96/117 (82%)
Strand = Plus / Minus
Query: 137 ctgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcc 196
||||||| | |||||||||||||||||||||| | ||||| | |||| |||||||||||
Sbjct: 298509 ctgcttcgtgacgcactgcgggtggaactccatcatggaggcgctcgccgcgggcgtgcc 298450
Query: 197 cgtggtggccttcccgcagtggggcgaccagtgcacggacgccaagttcctggtgga 253
||||| | | |||| |||| |||||||| | || ||||||||||| |||||||
Sbjct: 298449 ggtggtcgggtacccgtggtggtccgaccagttcgcgaacgccaagttcttggtgga 298393
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 65.9 bits (33), Expect = 3e-008
Identities = 96/117 (82%)
Strand = Plus / Minus
Query: 137 ctgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcc 196
||||||| | |||||||||||||||||||||| | ||||| | |||| |||||||||||
Sbjct: 9693317 ctgcttcgtgacgcactgcgggtggaactccatcatggaggcgctcgccgcgggcgtgcc 9693258
Query: 197 cgtggtggccttcccgcagtggggcgaccagtgcacggacgccaagttcctggtgga 253
||||| | | |||| |||| |||||||| | || ||||||||||| |||||||
Sbjct: 9693257 ggtggtcgggtacccgtggtggtccgaccagttcgcgaacgccaagttcttggtgga 9693201
Score = 52.0 bits (26), Expect = 5e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||||| |||||||
Sbjct: 8368651 acgcactgcgggtggaactccatcctggag 8368680
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 8372939 acgcactgcgggtggaactcgacgctggag 8372910
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 8370138 acgcactgcgggtggaactcgacgctggag 8370109
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggag 176
||||||||||||||||||||| |||||||
Sbjct: 8365378 acgcactgcgggtggaactccgtcctggag 8365407
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 65.9 bits (33), Expect = 3e-008
Identities = 96/117 (82%)
Strand = Plus / Minus
Query: 137 ctgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcc 196
||||||| | |||||||||||||||||||||| | ||||| | |||| |||||||||||
Sbjct: 26993630 ctgcttcgtgacgcactgcgggtggaactccatcatggaggcgctcgccgcgggcgtgcc 26993571
Query: 197 cgtggtggccttcccgcagtggggcgaccagtgcacggacgccaagttcctggtgga 253
||||| | | |||| |||| |||||||| | || ||||||||||| |||||||
Sbjct: 26993570 ggtggtcgggtacccgtggtggtccgaccagttcgcgaacgccaagttcttggtgga 26993514
Score = 52.0 bits (26), Expect = 5e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||||| |||||||
Sbjct: 25668964 acgcactgcgggtggaactccatcctggag 25668993
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 25673252 acgcactgcgggtggaactcgacgctggag 25673223
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 25670451 acgcactgcgggtggaactcgacgctggag 25670422
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggag 176
||||||||||||||||||||| |||||||
Sbjct: 25665691 acgcactgcgggtggaactccgtcctggag 25665720
Score = 42.1 bits (21), Expect = 0.46
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 138 tgcttcctcacgcactgcgggtggaactc 166
|||||| | ||||||||||||||||||||
Sbjct: 4632136 tgcttcgtgacgcactgcgggtggaactc 4632108
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 65.9 bits (33), Expect = 3e-008
Identities = 96/117 (82%)
Strand = Plus / Minus
Query: 137 ctgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgcc 196
||||||| | |||||||||||||||||||||| | ||||| | |||| |||||||||||
Sbjct: 27266086 ctgcttcgtgacgcactgcgggtggaactccatcatggaggcgctcgccgcgggcgtgcc 27266027
Query: 197 cgtggtggccttcccgcagtggggcgaccagtgcacggacgccaagttcctggtgga 253
||||| | | |||| |||| |||||||| | || ||||||||||| |||||||
Sbjct: 27266026 ggtggtcgggtacccgtggtggtccgaccagttcgcgaacgccaagttcttggtgga 27265970
Score = 52.0 bits (26), Expect = 5e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||||| |||||||
Sbjct: 25990627 acgcactgcgggtggaactccatcctggag 25990656
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 25994915 acgcactgcgggtggaactcgacgctggag 25994886
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 147 acgcactgcgggtggaactccaccctggag 176
|||||||||||||||||||| || ||||||
Sbjct: 25992114 acgcactgcgggtggaactcgacgctggag 25992085
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 147 acgcactgcgggtggaactccaccctggag 176
||||||||||||||||||||| |||||||
Sbjct: 25987354 acgcactgcgggtggaactccgtcctggag 25987383
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 14895390 gcgcggcggcgcgggaggccg 14895410
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 6866994 gcgcggcggcgcgggaggccg 6866974
Score = 42.1 bits (21), Expect = 0.46
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 138 tgcttcctcacgcactgcgggtggaactc 166
|||||| | ||||||||||||||||||||
Sbjct: 4741884 tgcttcgtgacgcactgcgggtggaactc 4741856
>dbj|AP003941.1| Oryza sativa (japonica cultivar-group) chromosome 6 clone OJ1111_E06,
*** SEQUENCING IN PROGRESS ***
Length = 141036
Score = 63.9 bits (32), Expect = 1e-007
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgccc 197
|||||| ||||||||||||| |||||||| ||||||| ||||||| |||||||||||
Sbjct: 72697 tgcttcgtcacgcactgcggctggaactcggtgctggagagcatcgcgtcgggcgtgccc 72638
Query: 198 gtggtggccttcccgc 213
|||||| | ||||||
Sbjct: 72637 atggtgggcgtcccgc 72622
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 137 ctgcttcctcacgcactgcgggtggaactc 166
||||||| | ||||||||||||||||||||
Sbjct: 50192 ctgcttcgtgacgcactgcgggtggaactc 50221
>dbj|AP004327.1| Oryza sativa (japonica cultivar-group) chromosome 6 clone OJ1378_E04,
*** SEQUENCING IN PROGRESS ***
Length = 134534
Score = 63.9 bits (32), Expect = 1e-007
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgccc 197
|||||| ||||||||||||| |||||||| ||||||| ||||||| |||||||||||
Sbjct: 32547 tgcttcgtcacgcactgcggctggaactcggtgctggagagcatcgcgtcgggcgtgccc 32488
Query: 198 gtggtggccttcccgc 213
|||||| | ||||||
Sbjct: 32487 atggtgggcgtcccgc 32472
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 137 ctgcttcctcacgcactgcgggtggaactc 166
||||||| | ||||||||||||||||||||
Sbjct: 10043 ctgcttcgtgacgcactgcgggtggaactc 10072
>dbj|AK062590.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-G10, full
insert sequence
Length = 1663
Score = 63.9 bits (32), Expect = 1e-007
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgccc 197
|||||| ||||||||||||| |||||||| ||||||| ||||||| |||||||||||
Sbjct: 1155 tgcttcgtcacgcactgcggctggaactcggtgctggagagcatcgcgtcgggcgtgccc 1214
Query: 198 gtggtggccttcccgc 213
|||||| | ||||||
Sbjct: 1215 atggtgggcgtcccgc 1230
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 63.9 bits (32), Expect = 1e-007
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgccc 197
|||||| ||||||||||||| |||||||| ||||||| ||||||| |||||||||||
Sbjct: 415709 tgcttcgtcacgcactgcggctggaactcggtgctggagagcatcgcgtcgggcgtgccc 415650
Query: 198 gtggtggccttcccgc 213
|||||| | ||||||
Sbjct: 415649 atggtgggcgtcccgc 415634
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 137 ctgcttcctcacgcactgcgggtggaactc 166
||||||| | ||||||||||||||||||||
Sbjct: 393205 ctgcttcgtgacgcactgcgggtggaactc 393234
>gb|AACV01014458.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014458, whole
genome shotgun sequence
Length = 40140
Score = 63.9 bits (32), Expect = 1e-007
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgccc 197
|||||| ||||||||||||| |||||||| ||||||| ||||||| |||||||||||
Sbjct: 37880 tgcttcgtcacgcactgcggctggaactcggtgctggagagcatcgcgtcgggcgtgccc 37821
Query: 198 gtggtggccttcccgc 213
|||||| | ||||||
Sbjct: 37820 atggtgggcgtcccgc 37805
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 137 ctgcttcctcacgcactgcgggtggaactc 166
||||||| | ||||||||||||||||||||
Sbjct: 15376 ctgcttcgtgacgcactgcgggtggaactc 15405
>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0502H06
Length = 165630
Score = 63.9 bits (32), Expect = 1e-007
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgccc 197
|||||| ||||||||||||| |||||||| ||||||| ||||||| |||||||||||
Sbjct: 125105 tgcttcgtcacgcactgcggctggaactcggtgctggagagcatcgcgtcgggcgtgccc 125046
Query: 198 gtggtggccttcccgc 213
|||||| | ||||||
Sbjct: 125045 atggtgggcgtcccgc 125030
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 137 ctgcttcctcacgcactgcgggtggaactc 166
||||||| | ||||||||||||||||||||
Sbjct: 102601 ctgcttcgtgacgcactgcgggtggaactc 102630
>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0652A05
Length = 150455
Score = 63.9 bits (32), Expect = 1e-007
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgccc 197
|||||| ||||||||||||| |||||||| ||||||| ||||||| |||||||||||
Sbjct: 16768 tgcttcgtcacgcactgcggctggaactcggtgctggagagcatcgcgtcgggcgtgccc 16709
Query: 198 gtggtggccttcccgc 213
|||||| | ||||||
Sbjct: 16708 atggtgggcgtcccgc 16693
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 63.9 bits (32), Expect = 1e-007
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgccc 197
|||||| ||||||||||||| |||||||| ||||||| ||||||| |||||||||||
Sbjct: 4284233 tgcttcgtcacgcactgcggctggaactcggtgctggagagcatcgcgtcgggcgtgccc 4284174
Query: 198 gtggtggccttcccgc 213
|||||| | ||||||
Sbjct: 4284173 atggtgggcgtcccgc 4284158
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 137 ctgcttcctcacgcactgcgggtggaactc 166
||||||| | ||||||||||||||||||||
Sbjct: 4261729 ctgcttcgtgacgcactgcgggtggaactc 4261758
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 63.9 bits (32), Expect = 1e-007
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgccc 197
|||||| ||||||||||||| |||||||| ||||||| ||||||| |||||||||||
Sbjct: 21982970 tgcttcgtcacgcactgcggctggaactcggtgctggagagcatcgcgtcgggcgtgccc 21982911
Query: 198 gtggtggccttcccgc 213
|||||| | ||||||
Sbjct: 21982910 atggtgggcgtcccgc 21982895
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 137 ctgcttcctcacgcactgcgggtggaactc 166
||||||| | ||||||||||||||||||||
Sbjct: 21960466 ctgcttcgtgacgcactgcgggtggaactc 21960495
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 141 ttcctcacgcactgcgggtggaactc 166
|||||||||||| |||||||||||||
Sbjct: 6139929 ttcctcacgcacagcgggtggaactc 6139954
Score = 42.1 bits (21), Expect = 0.46
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 138 tgcttcctcacgcactgcgggtggaactc 166
|||||| | ||||||||||||||||||||
Sbjct: 9917293 tgcttcgtgacgcactgcgggtggaactc 9917265
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 149 gcactgcgggtggaactccac 169
|||||||||||||||||||||
Sbjct: 9912245 gcactgcgggtggaactccac 9912225
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 63.9 bits (32), Expect = 1e-007
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 138 tgcttcctcacgcactgcgggtggaactccaccctggagaccatcgcggcgggcgtgccc 197
|||||| ||||||||||||| |||||||| ||||||| ||||||| |||||||||||
Sbjct: 22950283 tgcttcgtcacgcactgcggctggaactcggtgctggagagcatcgcgtcgggcgtgccc 22950224
Query: 198 gtggtggccttcccgc 213
|||||| | ||||||
Sbjct: 22950223 atggtgggcgtcccgc 22950208
Score = 56.0 bits (28), Expect = 3e-005
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 145 tcacgcactgcgggtggaactccaccctggag 176
||||||||||||||||||||||||| ||||||
Sbjct: 10003017 tcacgcactgcgggtggaactccacgctggag 10002986
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 137 ctgcttcctcacgcactgcgggtggaactc 166
||||||| | ||||||||||||||||||||
Sbjct: 22927779 ctgcttcgtgacgcactgcgggtggaactc 22927808
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 141 ttcctcacgcactgcgggtggaactc 166
|||||||||||| |||||||||||||
Sbjct: 6217745 ttcctcacgcacagcgggtggaactc 6217770
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 20902539 gcgcggcggcgcgggaggccg 20902559
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 19668322 gcgcggcggcgcgggaggccg 19668302
Score = 42.1 bits (21), Expect = 0.46
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 138 tgcttcctcacgcactgcgggtggaactc 166
|||||| | ||||||||||||||||||||
Sbjct: 10008061 tgcttcgtgacgcactgcgggtggaactc 10008033
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18,
complete sequence
Length = 144720
Score = 60.0 bits (30), Expect = 2e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 140 cttcctcacgcactgcgggtggaactccaccctggaga 177
|||||||||||||||||| |||||||||| ||||||||
Sbjct: 97611 cttcctcacgcactgcggctggaactccatcctggaga 97574
>gb|AACV01021651.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021651, whole
genome shotgun sequence
Length = 11640
Score = 60.0 bits (30), Expect = 2e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 140 cttcctcacgcactgcgggtggaactccaccctggaga 177
|||||||||||||||||| |||||||||| ||||||||
Sbjct: 10256 cttcctcacgcactgcggctggaactccatcctggaga 10219
>ref|NM_196703.1| Oryza sativa (japonica cultivar-group) putative putative
glucosyltransferase (OSJNBa0046P18.12), mRNA
Length = 1512
Score = 60.0 bits (30), Expect = 2e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 140 cttcctcacgcactgcgggtggaactccaccctggaga 177
|||||||||||||||||| |||||||||| ||||||||
Sbjct: 1161 cttcctcacgcactgcggctggaactccatcctggaga 1198
>ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4809259
Score = 60.0 bits (30), Expect = 2e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 140 cttcctcacgcactgcgggtggaactccaccctggaga 177
|||||||||||||||||| |||||||||| ||||||||
Sbjct: 2111879 cttcctcacgcactgcggctggaactccatcctggaga 2111842
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 60.0 bits (30), Expect = 2e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 140 cttcctcacgcactgcgggtggaactccaccctggaga 177
|||||||||||||||||| |||||||||| ||||||||
Sbjct: 3326674 cttcctcacgcactgcggctggaactccatcctggaga 3326637
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 293 gcgggacgccgtgcgggaggcg 314
||||||||||||||||||||||
Sbjct: 9413587 gcgggacgccgtgcgggaggcg 9413566
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 60.0 bits (30), Expect = 2e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 140 cttcctcacgcactgcgggtggaactccaccctggaga 177
|||||||||||||||||| |||||||||| ||||||||
Sbjct: 14192468 cttcctcacgcactgcggctggaactccatcctggaga 14192431
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 293 gcgggacgccgtgcgggaggcg 314
||||||||||||||||||||||
Sbjct: 20279381 gcgggacgccgtgcgggaggcg 20279360
Score = 42.1 bits (21), Expect = 0.46
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 148 cgcactgcgggtggaactccaccctggag 176
||||||||||||||||||| ||| |||||
Sbjct: 8247992 cgcactgcgggtggaactcgaccatggag 8247964
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 60.0 bits (30), Expect = 2e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 140 cttcctcacgcactgcgggtggaactccaccctggaga 177
|||||||||||||||||| |||||||||| ||||||||
Sbjct: 15380248 cttcctcacgcactgcggctggaactccatcctggaga 15380211
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 293 gcgggacgccgtgcgggaggcg 314
||||||||||||||||||||||
Sbjct: 21443845 gcgggacgccgtgcgggaggcg 21443824
Score = 42.1 bits (21), Expect = 0.46
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 148 cgcactgcgggtggaactccaccctggag 176
||||||||||||||||||| ||| |||||
Sbjct: 8923502 cgcactgcgggtggaactcgaccatggag 8923474
Score = 42.1 bits (21), Expect = 0.46
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 148 cgcactgcgggtggaactccaccctggag 176
||||||||||||||||||| ||| |||||
Sbjct: 8917147 cgcactgcgggtggaactcgaccatggag 8917119
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 3018392 gcgcggcggcgcgggaggccg 3018372
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 60.0 bits (30), Expect = 2e-006
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 140 cttcctcacgcactgcgggtggaactccaccctggaga 177
|||||||||||||||||| |||||||||| ||||||||
Sbjct: 15388489 cttcctcacgcactgcggctggaactccatcctggaga 15388452
Score = 44.1 bits (22), Expect = 0.12
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 293 gcgggacgccgtgcgggaggcg 314
||||||||||||||||||||||
Sbjct: 21455108 gcgggacgccgtgcgggaggcg 21455087
Score = 42.1 bits (21), Expect = 0.46
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 148 cgcactgcgggtggaactccaccctggag 176
||||||||||||||||||| ||| |||||
Sbjct: 8928641 cgcactgcgggtggaactcgaccatggag 8928613
Score = 42.1 bits (21), Expect = 0.46
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 148 cgcactgcgggtggaactccaccctggag 176
||||||||||||||||||| ||| |||||
Sbjct: 8922286 cgcactgcgggtggaactcgaccatggag 8922258
Score = 42.1 bits (21), Expect = 0.46
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 376 gcgcggcggcgcgggaggccg 396
|||||||||||||||||||||
Sbjct: 3018313 gcgcggcggcgcgggaggccg 3018293
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,411,748
Number of Sequences: 438736
Number of extensions: 1411748
Number of successful extensions: 17221
Number of sequences better than 0.5: 410
Number of HSP's better than 0.5 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 11708
Number of HSP's gapped (non-prelim): 5471
length of query: 804
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 783
effective length of database: 2,791,206,460
effective search space: 2185514658180
effective search space used: 2185514658180
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)