BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716424.2.5
(1999 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AP003909.3| Oryza sativa (japonica cultivar-group) geno... 96 9e-017
dbj|AP004462.3| Oryza sativa (japonica cultivar-group) geno... 96 9e-017
gb|AACV01017103.1| Oryza sativa (japonica cultivar-group) c... 96 9e-017
ref|XM_479696.1| Oryza sativa (japonica cultivar-group), mRNA 96 9e-017
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 96 9e-017
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 96 9e-017
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 96 9e-017
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 96 9e-017
gb|AACV01017101.1| Oryza sativa (japonica cultivar-group) c... 82 1e-012
ref|XM_479695.1| Oryza sativa (japonica cultivar-group), mRNA 82 1e-012
ref|NT_107126.1| Oryza sativa (japonica cultivar-group) 74 3e-010
gb|AC135512.6| Oryza sativa (japonica cultivar-group) chrom... 74 3e-010
gb|AACV01023036.1| Oryza sativa (japonica cultivar-group) c... 74 3e-010
gb|CH401263.1| Oryza sativa (japonica cultivar-group) chrom... 74 3e-010
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 74 3e-010
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 74 3e-010
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 74 3e-010
gb|CB654797.1|CB654797 OSJNEc07J11.f OSJNEc Oryza sativa (j... 68 2e-008
gb|CB654798.1|CB654798 OSJNEc07J11.r OSJNEc Oryza sativa (j... 68 2e-008
dbj|AK072861.1| Oryza sativa (japonica cultivar-group) cDNA... 68 2e-008
dbj|AP006461.3| Oryza sativa (japonica cultivar-group) geno... 68 2e-008
gb|AACV01018675.1| Oryza sativa (japonica cultivar-group) c... 68 2e-008
ref|XM_482839.1| Oryza sativa (japonica cultivar-group), mRNA 68 2e-008
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 68 2e-008
dbj|AK110565.1| Oryza sativa (japonica cultivar-group) cDNA... 64 3e-007
dbj|AP005308.3| Oryza sativa (japonica cultivar-group) geno... 64 3e-007
dbj|AP005575.3| Oryza sativa (japonica cultivar-group) geno... 64 3e-007
gb|AACV01020124.1| Oryza sativa (japonica cultivar-group) c... 64 3e-007
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 64 3e-007
ref|NT_107084.1| Oryza sativa (japonica cultivar-group) 64 3e-007
ref|NM_188581.1| Oryza sativa (japonica cultivar-group), p... 64 3e-007
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 64 3e-007
dbj|AP003434.2| Oryza sativa (japonica cultivar-group) geno... 64 3e-007
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 64 3e-007
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 64 3e-007
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 64 3e-007
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 64 3e-007
emb|AL607097.1|OSJN01006 Oryza sativa (japonica cultivar-gr... 62 1e-006
gb|AF488521.1| Oryza sativa Cyt-P450 monooxygenase (PM-I) m... 62 1e-006
dbj|AK099468.1| Oryza sativa (japonica cultivar-group) cDNA... 62 1e-006
dbj|AK105993.1| Oryza sativa (japonica cultivar-group) cDNA... 62 1e-006
dbj|AP005621.2| Oryza sativa (japonica cultivar-group) geno... 62 1e-006
dbj|AP005245.3| Oryza sativa (japonica cultivar-group) geno... 62 1e-006
dbj|AP005254.3| Oryza sativa (japonica cultivar-group) geno... 62 1e-006
gb|AACV01000500.1| Oryza sativa (japonica cultivar-group) c... 62 1e-006
gb|AACV01012852.1| Oryza sativa (japonica cultivar-group) c... 62 1e-006
gb|AACV01018823.1| Oryza sativa (japonica cultivar-group) c... 62 1e-006
dbj|AP002842.3| Oryza sativa (japonica cultivar-group) geno... 62 1e-006
ref|XM_483259.1| Oryza sativa (japonica cultivar-group), mRNA 62 1e-006
ref|NM_188579.1| Oryza sativa (japonica cultivar-group), p... 62 1e-006
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 62 1e-006
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 62 1e-006
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 62 1e-006
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 62 1e-006
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 62 1e-006
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 62 1e-006
gb|CB656256.1|CB656256 OSJNEc10G09.f OSJNEc Oryza sativa (j... 60 5e-006
gb|AC134348.2| Oryza sativa (japonica cultivar-group) chrom... 58 2e-005
gb|AC135929.2| Oryza sativa (japonica cultivar-group) chrom... 58 2e-005
gb|AACV01011951.1| Oryza sativa (japonica cultivar-group) c... 58 2e-005
ref|XM_475110.1| Oryza sativa (japonica cultivar-group), p... 58 2e-005
ref|NT_107210.1| Oryza sativa (japonica cultivar-group) 58 2e-005
gb|CH401205.1| Oryza sativa (japonica cultivar-group) chrom... 58 2e-005
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 58 2e-005
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 58 2e-005
dbj|AK110659.1| Oryza sativa (japonica cultivar-group) cDNA... 56 8e-005
dbj|AP004811.2| Oryza sativa (japonica cultivar-group) geno... 56 8e-005
ref|NT_107237.1| Oryza sativa (japonica cultivar-group) 56 8e-005
gb|AACV01013783.1| Oryza sativa (japonica cultivar-group) c... 56 8e-005
gb|CH401212.1| Oryza sativa (japonica cultivar-group) chrom... 56 8e-005
dbj|AK064764.1| Oryza sativa (japonica cultivar-group) cDNA... 54 3e-004
gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 ... 54 3e-004
dbj|AP005878.2| Oryza sativa (japonica cultivar-group) geno... 54 3e-004
dbj|AP005893.3| Oryza sativa (japonica cultivar-group) geno... 54 3e-004
gb|AACV01003510.1| Oryza sativa (japonica cultivar-group) c... 54 3e-004
gb|AACV01019354.1| Oryza sativa (japonica cultivar-group) c... 54 3e-004
gb|AACV01031567.1| Oryza sativa (japonica cultivar-group) C... 54 3e-004
ref|XM_450449.1| Oryza sativa (japonica cultivar-group), mRNA 54 3e-004
ref|XM_464380.1| Oryza sativa (japonica cultivar-group), mRNA 54 3e-004
ref|NT_107079.1| Oryza sativa (japonica cultivar-group) 54 3e-004
ref|NT_107174.1| Oryza sativa (japonica cultivar-group) 54 3e-004
ref|NT_107177.1| Oryza sativa (japonica cultivar-group) 54 3e-004
dbj|AP003990.3| Oryza sativa (japonica cultivar-group) geno... 54 3e-004
dbj|AP004000.3| Oryza sativa (japonica cultivar-group) geno... 54 3e-004
gb|CH401240.1| Oryza sativa (japonica cultivar-group) chrom... 54 3e-004
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 54 3e-004
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 54 3e-004
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 54 3e-004
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 54 3e-004
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 54 3e-004
gb|AQ573853.1|AQ573853 nbxb0085A03r CUGI Rice BAC Library O... 52 0.001
gb|AQ795917.1|AQ795917 nbxb0058F03f CUGI Rice BAC Library O... 52 0.001
gb|CB637562.1|CB637562 OSJNEa04G21.f OSJNEa Oryza sativa (j... 52 0.001
gb|CB640129.1|CB640129 OSJNEa13G03.f OSJNEa Oryza sativa (j... 52 0.001
gb|CB647244.1|CB647244 OSJNEb10B13.r OSJNEb Oryza sativa (j... 52 0.001
gb|CB652379.1|CB652379 OSJNEc02D15.r OSJNEc Oryza sativa (j... 52 0.001
gb|CB652381.1|CB652381 OSJNEc02D16.r OSJNEc Oryza sativa (j... 52 0.001
gb|CB652383.1|CB652383 OSJNEc02D17.r OSJNEc Oryza sativa (j... 52 0.001
gb|CB655043.1|CB655043 OSJNEc08B07.r OSJNEc Oryza sativa (j... 52 0.001
gb|CB659217.1|CB659217 OSJNEc16A08.f OSJNEc Oryza sativa (j... 52 0.001
gb|CB666330.1|CB666330 OSJNEd13D02.r OSJNEd Oryza sativa (j... 52 0.001
gb|CB675220.1|CB675220 OSJNEe10M22.r OSJNEe Oryza sativa (j... 52 0.001
dbj|AK058639.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.001
dbj|AK065355.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.001
dbj|AK066010.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.001
dbj|AK066760.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.001
dbj|AK067200.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.001
dbj|AK072715.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.001
dbj|AK104825.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.001
dbj|AK119264.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.001
dbj|AK120444.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.001
dbj|AK120674.1| Oryza sativa (japonica cultivar-group) cDNA... 52 0.001
gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 ... 52 0.001
gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 ... 52 0.001
gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 ... 52 0.001
gb|AC132003.4| Oryza sativa (japonica cultivar-group) chrom... 52 0.001
emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC O... 52 0.001
dbj|AP005682.2| Oryza sativa (japonica cultivar-group) geno... 52 0.001
ref|NT_107125.1| Oryza sativa (japonica cultivar-group) 52 0.001
ref|NT_107152.1| Oryza sativa (japonica cultivar-group) 52 0.001
gb|AACV01002167.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
gb|AACV01007961.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
gb|AACV01008267.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
gb|AACV01017100.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
gb|AACV01020440.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
gb|AACV01023023.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
gb|AACV01025360.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
ref|NM_185174.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
ref|NM_192202.1| Oryza sativa (japonica cultivar-group), p... 52 0.001
ref|XM_464378.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
ref|XM_469850.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
ref|XM_479691.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
ref|XM_479692.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
ref|XM_479693.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.001
ref|NT_079914.2| Oryza sativa (japonica cultivar-group) 52 0.001
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 52 0.001
ref|NT_107187.1| Oryza sativa (japonica cultivar-group) 52 0.001
ref|NT_107077.1| Oryza sativa (japonica cultivar-group) 52 0.001
dbj|AP003254.3| Oryza sativa (japonica cultivar-group) geno... 52 0.001
dbj|AP003378.4| Oryza sativa (japonica cultivar-group) geno... 52 0.001
gb|CH401282.1| Oryza sativa (japonica cultivar-group) chrom... 52 0.001
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 52 0.001
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 52 0.001
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 52 0.001
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 52 0.001
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 52 0.001
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 52 0.001
gb|AQ691042.1|AQ691042 nbxb0086M20r CUGI Rice BAC Library O... 50 0.005
gb|AU176462.1|AU176462 AU176462 Rice panicle at ripening st... 50 0.005
gb|CB659650.1|CB659650 OSJNEc16M24.r OSJNEc Oryza sativa (j... 50 0.005
dbj|AK060722.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.005
dbj|AK060739.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.005
dbj|AK069494.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.005
dbj|AK069701.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.005
gb|AC068924.11| Oryza sativa chromosome 10 BAC OSJNBa0026L1... 50 0.005
dbj|AP005835.3| Oryza sativa (japonica cultivar-group) geno... 50 0.005
dbj|AP006069.3| Oryza sativa (japonica cultivar-group) geno... 50 0.005
gb|AC137617.3| Oryza sativa (japonica cultivar-group) chrom... 50 0.005
dbj|AP003623.3| Oryza sativa (japonica cultivar-group) geno... 50 0.005
ref|NT_079878.2| Oryza sativa (japonica cultivar-group) 50 0.005
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 50 0.005
dbj|AP004684.3| Oryza sativa (japonica cultivar-group) geno... 50 0.005
dbj|AP004688.3| Oryza sativa (japonica cultivar-group) geno... 50 0.005
gb|AC108875.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.005
gb|AACV01001578.1| Oryza sativa (japonica cultivar-group) c... 50 0.005
gb|AACV01004723.1| Oryza sativa (japonica cultivar-group) c... 50 0.005
gb|AACV01012173.1| Oryza sativa (japonica cultivar-group) c... 50 0.005
gb|AACV01014067.1| Oryza sativa (japonica cultivar-group) c... 50 0.005
gb|AACV01014488.1| Oryza sativa (japonica cultivar-group) c... 50 0.005
gb|AACV01021931.1| Oryza sativa (japonica cultivar-group) c... 50 0.005
ref|NM_193526.1| Oryza sativa (japonica cultivar-group), p... 50 0.005
ref|NM_197328.1| Oryza sativa (japonica cultivar-group) put... 50 0.005
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 50 0.005
ref|XM_466327.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.005
ref|XM_479689.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.005
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 50 0.005
ref|NT_107212.1| Oryza sativa (japonica cultivar-group) 50 0.005
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 50 0.005
dbj|AP003267.3| Oryza sativa (japonica cultivar-group) geno... 50 0.005
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.005
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.005
gb|CH401214.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.005
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.005
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.005
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.005
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.005
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 50 0.005
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 50 0.005
gb|AQ327338.1|AQ327338 nbxb0040D24r CUGI Rice BAC Library O... 48 0.019
gb|AU062487.1|AU062487 AU062487 Rice callus Oryza sativa (j... 48 0.019
gb|AU173996.1|AU173996 AU173996 Rice green shoot Oryza sati... 48 0.019
gb|CB641718.1|CB641718 OSJNEb01I06.r OSJNEb Oryza sativa (j... 48 0.019
gb|CB643546.1|CB643546 OSJNEb04E15.r OSJNEb Oryza sativa (j... 48 0.019
gb|CB644071.1|CB644071 OSJNEb05B21.r OSJNEb Oryza sativa (j... 48 0.019
gb|CB648724.1|CB648724 OSJNEb12E01.r OSJNEb Oryza sativa (j... 48 0.019
gb|CB652233.1|CB652233 OSJNEc01O11.f OSJNEc Oryza sativa (j... 48 0.019
gb|CB668652.1|CB668652 OSJNEd16J18.r OSJNEd Oryza sativa (j... 48 0.019
gb|CB685613.1|CB685613 OSJNEf16C21.r OSJNEf Oryza sativa (j... 48 0.019
dbj|AK100321.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.019
dbj|AK105678.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.019
dbj|AK106672.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.019
dbj|AK107584.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.019
dbj|AK111616.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.019
dbj|AK119487.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.019
dbj|AP005175.4| Oryza sativa (japonica cultivar-group) geno... 48 0.019
dbj|AP005809.4| Oryza sativa (japonica cultivar-group) geno... 48 0.019
dbj|AP005570.3| Oryza sativa (japonica cultivar-group) geno... 48 0.019
dbj|AP005419.3| Oryza sativa (japonica cultivar-group) geno... 48 0.019
gb|AACV01010945.1| Oryza sativa (japonica cultivar-group) c... 48 0.019
gb|AACV01014489.1| Oryza sativa (japonica cultivar-group) c... 48 0.019
gb|AACV01016741.1| Oryza sativa (japonica cultivar-group) c... 48 0.019
gb|AACV01020088.1| Oryza sativa (japonica cultivar-group) c... 48 0.019
gb|AACV01020091.1| Oryza sativa (japonica cultivar-group) c... 48 0.019
gb|AACV01021936.1| Oryza sativa (japonica cultivar-group) c... 48 0.019
ref|NM_197342.1| Oryza sativa (japonica cultivar-group) put... 48 0.019
ref|NM_197343.1| Oryza sativa (japonica cultivar-group) put... 48 0.019
ref|XM_479078.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.019
dbj|AP003612.2| Oryza sativa (japonica cultivar-group) geno... 48 0.019
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 48 0.019
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.019
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.019
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.019
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 48 0.019
gb|AU071096.1|AU071096 AU071096 Rice cDNA from young root O... 46 0.074
gb|CF329812.1|CF329812 NACL--05-E11.g1 Rice callus plasmid ... 46 0.074
gb|AC125784.1| Genomic sequence for Oryza sativa, Nipponbar... 46 0.074
gb|AC144427.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.074
dbj|AP006176.3| Oryza sativa (japonica cultivar-group) geno... 46 0.074
dbj|AP006446.3| Oryza sativa (japonica cultivar-group) geno... 46 0.074
gb|AACV01006705.1| Oryza sativa (japonica cultivar-group) c... 46 0.074
gb|AACV01007211.1| Oryza sativa (japonica cultivar-group) c... 46 0.074
gb|AACV01019290.1| Oryza sativa (japonica cultivar-group) c... 46 0.074
gb|AC135502.4| Oryza sativa chromosome 3 BAC OSJNBb0085A04 ... 46 0.074
ref|NT_079854.2| Oryza sativa (japonica cultivar-group) 46 0.074
gb|CH401237.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.074
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.074
gb|CB646631.1|CB646631 OSJNEb09D12.r OSJNEb Oryza sativa (j... 44 0.29
gb|CB650580.1|CB650580 OSJNEb15B16.r OSJNEb Oryza sativa (j... 44 0.29
gb|CB654161.1|CB654161 OSJNEc05O08.r OSJNEc Oryza sativa (j... 44 0.29
gb|CB660342.1|CB660342 OSJNEd01P15.r OSJNEd Oryza sativa (j... 44 0.29
gb|CB670262.1|CB670262 OSJNEe03E01.r OSJNEe Oryza sativa (j... 44 0.29
gb|AF488522.1| Oryza sativa Cyt-P450 monooxygenase (PM-II) ... 44 0.29
dbj|AK064029.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.29
dbj|AK067847.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.29
dbj|AK067905.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.29
dbj|AK099637.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.29
dbj|AK102040.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.29
dbj|AK105519.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.29
dbj|AK105694.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.29
dbj|AK120914.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.29
dbj|AK122077.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.29
dbj|AK122138.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.29
gb|AC073867.6| Oryza sativa chromosome 10 BAC OSJNBa0055O03... 44 0.29
dbj|AP005816.3| Oryza sativa (japonica cultivar-group) geno... 44 0.29
dbj|AP005797.3| Oryza sativa (japonica cultivar-group) geno... 44 0.29
dbj|AP005826.3| Oryza sativa (japonica cultivar-group) geno... 44 0.29
dbj|AP005753.2| Oryza sativa (japonica cultivar-group) geno... 44 0.29
dbj|AP005732.3| Oryza sativa (japonica cultivar-group) geno... 44 0.29
gb|AACV01000499.1| Oryza sativa (japonica cultivar-group) c... 44 0.29
gb|AACV01001813.1| Oryza sativa (japonica cultivar-group) c... 44 0.29
gb|AACV01003641.1| Oryza sativa (japonica cultivar-group) c... 44 0.29
gb|AACV01011025.1| Oryza sativa (japonica cultivar-group) c... 44 0.29
gb|AACV01018824.1| Oryza sativa (japonica cultivar-group) c... 44 0.29
gb|AACV01018826.1| Oryza sativa (japonica cultivar-group) c... 44 0.29
gb|AACV01019942.1| Oryza sativa (japonica cultivar-group) c... 44 0.29
gb|AACV01021929.1| Oryza sativa (japonica cultivar-group) c... 44 0.29
ref|NM_197316.1| Oryza sativa (japonica cultivar-group) put... 44 0.29
ref|XM_464704.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.29
ref|XM_464705.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.29
ref|XM_483262.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.29
ref|XM_483266.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.29
ref|NT_107083.1| Oryza sativa (japonica cultivar-group) 44 0.29
ref|NT_107223.1| Oryza sativa (japonica cultivar-group) 44 0.29
ref|XM_506761.1| PREDICTED Oryza sativa (japonica cultivar-... 44 0.29
ref|XM_507287.1| PREDICTED Oryza sativa (japonica cultivar-... 44 0.29
ref|NM_188578.1| Oryza sativa (japonica cultivar-group), p... 44 0.29
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 44 0.29
gb|AC135425.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.29
>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1300_E01
Length = 103022
Score = 95.6 bits (48), Expect = 9e-017
Identities = 135/164 (82%)
Strand = Plus / Minus
Query: 1468 gatgatctcggcggccatggacggcggccgcgacgcgaagatgtggtcctgggtgcgcag 1527
|||||| |||| | ||||||| ||||||||||||||||| | |||| |||||||| ||
Sbjct: 79436 gatgatgtcggtgaccatggagcgcggccgcgacgcgaaggcgaggtcgtgggtgcggag 79377
Query: 1528 gacggcgtcggcggcgctgggcgaggacacgaacagggtgggcacggcgccgatgcggag 1587
|||||| ||||| |||| |||||||| |||| ||||||||| |||| ||||| |||||
Sbjct: 79376 gacggcctcggctgcgcgcggcgaggagacgaccagggtggggacggagccgaggcggac 79317
Query: 1588 gagcagcaggccgttgcgcccgtgcttggcgtccaggtcccgga 1631
||||| ||||||| ||| || || |||||| | ||||| ||||
Sbjct: 79316 gagcatgaggccgtcgcggccatgtttggcggcgaggtctcgga 79273
Score = 81.8 bits (41), Expect = 1e-012
Identities = 116/141 (82%)
Strand = Plus / Minus
Query: 1491 gcggccgcgacgcgaagatgtggtcctgggtgcgcaggacggcgtcggcggcgctgggcg 1550
||||||||||||||||| | |||| |||||||| |||||||| |||||||||| ||||
Sbjct: 68659 gcggccgcgacgcgaaggcgaggtcgtgggtgcggaggacggcctcggcggcgcgcggcg 68600
Query: 1551 aggacacgaacagggtgggcacggcgccgatgcggaggagcagcaggccgttgcgcccgt 1610
|||| |||| |||||||| |||| ||||| | ||| ||||| ||||||| ||| || |
Sbjct: 68599 aggagacgacgagggtggggacggagccgaggtggacgagcatgaggccgtcgcggccat 68540
Query: 1611 gcttggcgtccaggtcccgga 1631
| |||||| | ||||| ||||
Sbjct: 68539 gtttggcggcgaggtctcgga 68519
Score = 52.0 bits (26), Expect = 0.001
Identities = 83/102 (81%)
Strand = Plus / Plus
Query: 1336 cacctcttcctgtcggccatggcggaaggactgcaccttcttggtgctgagcatgtgcgt 1395
|||||| |||| |||||| |||||| ||||| |||||||||| |||||||| ||| |
Sbjct: 63348 cacctcctcctcgcggccacggcggagcgactggaccttcttggggctgagcaagtgggc 63407
Query: 1396 ggtgaggagtttcctgccctgccgccagtactcgccgtaggg 1437
|| || ||| ||||| ||| |||||||| |||||||||||
Sbjct: 63408 ggcgacgagcttcctcgccttgcgccagtagtcgccgtaggg 63449
Score = 52.0 bits (26), Expect = 0.001
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 885 cctcgaacatgtccaccaagatggccttgagattgtccgtagtgaggccgtactcttgct 944
||||||||||| ||||||||| ||||||| ||||| ||||||| ||||| || ||||
Sbjct: 57369 cctcgaacatgatcaccaagattgccttgacgttgtctctagtgagaccgtattcatgct 57428
Query: 945 gtatggagag 954
| ||||||||
Sbjct: 57429 gaatggagag 57438
Score = 50.1 bits (25), Expect = 0.005
Identities = 100/125 (80%)
Strand = Plus / Plus
Query: 836 agctcggccatgccgtactctagcgtcaggtaagatgtctctatacctgcctcgaacatg 895
|||||||||||| | ||||||||| | ||| ||||| ||| | || ||||||||||||
Sbjct: 49410 agctcggccatggcatactctagctctatgtatgatgtatctgttccagcctcgaacatg 49469
Query: 896 tccaccaagatggccttgagattgtccgtagtgaggccgtactcttgctgtatggagagc 955
| |||||| | || |||| || ||| |||||||||| |||||||| || || |||||
Sbjct: 49470 acaaccaagtttgctttgatgttatccttagtgaggccatactcttgttgaatagagagt 49529
Query: 956 agaac 960
|||||
Sbjct: 49530 agaac 49534
Score = 44.1 bits (22), Expect = 0.29
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 1331 agccgcacctcttcctgtcggccatggcggaaggactgcaccttcttggtgctgagca 1388
||||||||||| |||| ||| |||||||| ||| ||||||| |||||| | ||||||
Sbjct: 79573 agccgcacctcctcctcccggacatggcggtaggcctgcaccctcttggagttgagca 79516
Score = 44.1 bits (22), Expect = 0.29
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 1491 gcggccgcgacgcgaagatgtggtcctgggtgcgcaggacggcgtcggcggcgc 1544
|||||||||||||||| | |||||| || | || |||||||| ||||||||||
Sbjct: 63503 gcggccgcgacgcgaacacgtggtcgtgagcccggaggacggcctcggcggcgc 63556
>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0450B04
Length = 153268
Score = 95.6 bits (48), Expect = 9e-017
Identities = 135/164 (82%)
Strand = Plus / Minus
Query: 1468 gatgatctcggcggccatggacggcggccgcgacgcgaagatgtggtcctgggtgcgcag 1527
|||||| |||| | ||||||| ||||||||||||||||| | |||| |||||||| ||
Sbjct: 22524 gatgatgtcggtgaccatggagcgcggccgcgacgcgaaggcgaggtcgtgggtgcggag 22465
Query: 1528 gacggcgtcggcggcgctgggcgaggacacgaacagggtgggcacggcgccgatgcggag 1587
|||||| ||||| |||| |||||||| |||| ||||||||| |||| ||||| |||||
Sbjct: 22464 gacggcctcggctgcgcgcggcgaggagacgaccagggtggggacggagccgaggcggac 22405
Query: 1588 gagcagcaggccgttgcgcccgtgcttggcgtccaggtcccgga 1631
||||| ||||||| ||| || || |||||| | ||||| ||||
Sbjct: 22404 gagcatgaggccgtcgcggccatgtttggcggcgaggtctcgga 22361
Score = 81.8 bits (41), Expect = 1e-012
Identities = 116/141 (82%)
Strand = Plus / Minus
Query: 1491 gcggccgcgacgcgaagatgtggtcctgggtgcgcaggacggcgtcggcggcgctgggcg 1550
||||||||||||||||| | |||| |||||||| |||||||| |||||||||| ||||
Sbjct: 11747 gcggccgcgacgcgaaggcgaggtcgtgggtgcggaggacggcctcggcggcgcgcggcg 11688
Query: 1551 aggacacgaacagggtgggcacggcgccgatgcggaggagcagcaggccgttgcgcccgt 1610
|||| |||| |||||||| |||| ||||| | ||| ||||| ||||||| ||| || |
Sbjct: 11687 aggagacgacgagggtggggacggagccgaggtggacgagcatgaggccgtcgcggccat 11628
Query: 1611 gcttggcgtccaggtcccgga 1631
| |||||| | ||||| ||||
Sbjct: 11627 gtttggcggcgaggtctcgga 11607
Score = 52.0 bits (26), Expect = 0.001
Identities = 83/102 (81%)
Strand = Plus / Plus
Query: 1336 cacctcttcctgtcggccatggcggaaggactgcaccttcttggtgctgagcatgtgcgt 1395
|||||| |||| |||||| |||||| ||||| |||||||||| |||||||| ||| |
Sbjct: 6436 cacctcctcctcgcggccacggcggagcgactggaccttcttggggctgagcaagtgggc 6495
Query: 1396 ggtgaggagtttcctgccctgccgccagtactcgccgtaggg 1437
|| || ||| ||||| ||| |||||||| |||||||||||
Sbjct: 6496 ggcgacgagcttcctcgccttgcgccagtagtcgccgtaggg 6537
Score = 52.0 bits (26), Expect = 0.001
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 885 cctcgaacatgtccaccaagatggccttgagattgtccgtagtgaggccgtactcttgct 944
||||||||||| ||||||||| ||||||| ||||| ||||||| ||||| || ||||
Sbjct: 457 cctcgaacatgatcaccaagattgccttgacgttgtctctagtgagaccgtattcatgct 516
Query: 945 gtatggagag 954
| ||||||||
Sbjct: 517 gaatggagag 526
Score = 44.1 bits (22), Expect = 0.29
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 1331 agccgcacctcttcctgtcggccatggcggaaggactgcaccttcttggtgctgagca 1388
||||||||||| |||| ||| |||||||| ||| ||||||| |||||| | ||||||
Sbjct: 22661 agccgcacctcctcctcccggacatggcggtaggcctgcaccctcttggagttgagca 22604
Score = 44.1 bits (22), Expect = 0.29
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 1491 gcggccgcgacgcgaagatgtggtcctgggtgcgcaggacggcgtcggcggcgc 1544
|||||||||||||||| | |||||| || | || |||||||| ||||||||||
Sbjct: 6591 gcggccgcgacgcgaacacgtggtcgtgagcccggaggacggcctcggcggcgc 6644
>gb|AACV01017103.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017103, whole
genome shotgun sequence
Length = 15027
Score = 95.6 bits (48), Expect = 9e-017
Identities = 135/164 (82%)
Strand = Plus / Minus
Query: 1468 gatgatctcggcggccatggacggcggccgcgacgcgaagatgtggtcctgggtgcgcag 1527
|||||| |||| | ||||||| ||||||||||||||||| | |||| |||||||| ||
Sbjct: 9050 gatgatgtcggtgaccatggagcgcggccgcgacgcgaaggcgaggtcgtgggtgcggag 8991
Query: 1528 gacggcgtcggcggcgctgggcgaggacacgaacagggtgggcacggcgccgatgcggag 1587
|||||| ||||| |||| |||||||| |||| ||||||||| |||| ||||| |||||
Sbjct: 8990 gacggcctcggctgcgcgcggcgaggagacgaccagggtggggacggagccgaggcggac 8931
Query: 1588 gagcagcaggccgttgcgcccgtgcttggcgtccaggtcccgga 1631
||||| ||||||| ||| || || |||||| | ||||| ||||
Sbjct: 8930 gagcatgaggccgtcgcggccatgtttggcggcgaggtctcgga 8887
>ref|XM_479696.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1575
Score = 95.6 bits (48), Expect = 9e-017
Identities = 135/164 (82%)
Strand = Plus / Minus
Query: 1468 gatgatctcggcggccatggacggcggccgcgacgcgaagatgtggtcctgggtgcgcag 1527
|||||| |||| | ||||||| ||||||||||||||||| | |||| |||||||| ||
Sbjct: 393 gatgatgtcggtgaccatggagcgcggccgcgacgcgaaggcgaggtcgtgggtgcggag 334
Query: 1528 gacggcgtcggcggcgctgggcgaggacacgaacagggtgggcacggcgccgatgcggag 1587
|||||| ||||| |||| |||||||| |||| ||||||||| |||| ||||| |||||
Sbjct: 333 gacggcctcggctgcgcgcggcgaggagacgaccagggtggggacggagccgaggcggac 274
Query: 1588 gagcagcaggccgttgcgcccgtgcttggcgtccaggtcccgga 1631
||||| ||||||| ||| || || |||||| | ||||| ||||
Sbjct: 273 gagcatgaggccgtcgcggccatgtttggcggcgaggtctcgga 230
Score = 44.1 bits (22), Expect = 0.29
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 1331 agccgcacctcttcctgtcggccatggcggaaggactgcaccttcttggtgctgagca 1388
||||||||||| |||| ||| |||||||| ||| ||||||| |||||| | ||||||
Sbjct: 530 agccgcacctcctcctcccggacatggcggtaggcctgcaccctcttggagttgagca 473
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 95.6 bits (48), Expect = 9e-017
Identities = 135/164 (82%)
Strand = Plus / Minus
Query: 1468 gatgatctcggcggccatggacggcggccgcgacgcgaagatgtggtcctgggtgcgcag 1527
|||||| |||| | ||||||| ||||||||||||||||| | |||| |||||||| ||
Sbjct: 79436 gatgatgtcggtgaccatggagcgcggccgcgacgcgaaggcgaggtcgtgggtgcggag 79377
Query: 1528 gacggcgtcggcggcgctgggcgaggacacgaacagggtgggcacggcgccgatgcggag 1587
|||||| ||||| |||| |||||||| |||| ||||||||| |||| ||||| |||||
Sbjct: 79376 gacggcctcggctgcgcgcggcgaggagacgaccagggtggggacggagccgaggcggac 79317
Query: 1588 gagcagcaggccgttgcgcccgtgcttggcgtccaggtcccgga 1631
||||| ||||||| ||| || || |||||| | ||||| ||||
Sbjct: 79316 gagcatgaggccgtcgcggccatgtttggcggcgaggtctcgga 79273
Score = 81.8 bits (41), Expect = 1e-012
Identities = 116/141 (82%)
Strand = Plus / Minus
Query: 1491 gcggccgcgacgcgaagatgtggtcctgggtgcgcaggacggcgtcggcggcgctgggcg 1550
||||||||||||||||| | |||| |||||||| |||||||| |||||||||| ||||
Sbjct: 68659 gcggccgcgacgcgaaggcgaggtcgtgggtgcggaggacggcctcggcggcgcgcggcg 68600
Query: 1551 aggacacgaacagggtgggcacggcgccgatgcggaggagcagcaggccgttgcgcccgt 1610
|||| |||| |||||||| |||| ||||| | ||| ||||| ||||||| ||| || |
Sbjct: 68599 aggagacgacgagggtggggacggagccgaggtggacgagcatgaggccgtcgcggccat 68540
Query: 1611 gcttggcgtccaggtcccgga 1631
| |||||| | ||||| ||||
Sbjct: 68539 gtttggcggcgaggtctcgga 68519
Score = 67.9 bits (34), Expect = 2e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggcttctcccacg 560
|||||||||||||||||||||||||||| |||||||||
Sbjct: 22632039 gaaccgctccggcatgaactcctccggcctctcccacg 22632002
Score = 61.9 bits (31), Expect = 1e-006
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 518 tgcacgaaccgctccggcatgaactcctccggcttctcccacg 560
|||| ||||| |||||||||||||||||||||| |||||||||
Sbjct: 24864702 tgcaggaacctctccggcatgaactcctccggcctctcccacg 24864744
Score = 52.0 bits (26), Expect = 0.001
Identities = 83/102 (81%)
Strand = Plus / Plus
Query: 1336 cacctcttcctgtcggccatggcggaaggactgcaccttcttggtgctgagcatgtgcgt 1395
|||||| |||| |||||| |||||| ||||| |||||||||| |||||||| ||| |
Sbjct: 63348 cacctcctcctcgcggccacggcggagcgactggaccttcttggggctgagcaagtgggc 63407
Query: 1396 ggtgaggagtttcctgccctgccgccagtactcgccgtaggg 1437
|| || ||| ||||| ||| |||||||| |||||||||||
Sbjct: 63408 ggcgacgagcttcctcgccttgcgccagtagtcgccgtaggg 63449
Score = 52.0 bits (26), Expect = 0.001
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 885 cctcgaacatgtccaccaagatggccttgagattgtccgtagtgaggccgtactcttgct 944
||||||||||| ||||||||| ||||||| ||||| ||||||| ||||| || ||||
Sbjct: 57369 cctcgaacatgatcaccaagattgccttgacgttgtctctagtgagaccgtattcatgct 57428
Query: 945 gtatggagag 954
| ||||||||
Sbjct: 57429 gaatggagag 57438
Score = 50.1 bits (25), Expect = 0.005
Identities = 100/125 (80%)
Strand = Plus / Plus
Query: 836 agctcggccatgccgtactctagcgtcaggtaagatgtctctatacctgcctcgaacatg 895
|||||||||||| | ||||||||| | ||| ||||| ||| | || ||||||||||||
Sbjct: 49410 agctcggccatggcatactctagctctatgtatgatgtatctgttccagcctcgaacatg 49469
Query: 896 tccaccaagatggccttgagattgtccgtagtgaggccgtactcttgctgtatggagagc 955
| |||||| | || |||| || ||| |||||||||| |||||||| || || |||||
Sbjct: 49470 acaaccaagtttgctttgatgttatccttagtgaggccatactcttgttgaatagagagt 49529
Query: 956 agaac 960
|||||
Sbjct: 49530 agaac 49534
Score = 48.1 bits (24), Expect = 0.019
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 445 cctccggccggagccgaacgggatgaac 472
|||||||||||| |||||||||||||||
Sbjct: 22632117 cctccggccggacccgaacgggatgaac 22632090
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 533 ggcatgaactcctccggcttctcccacgtcgtccggtc 570
||||||||||| |||||| ||||||||| |||| ||||
Sbjct: 24911082 ggcatgaactcgtccggcctctcccacgccgtcgggtc 24911045
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggcttctcccacg 560
||||| ||| |||||||||||||| ||| |||||||||
Sbjct: 24888459 gaacctctctggcatgaactcctcgggcctctcccacg 24888422
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 655 gtgcgggaggaggaacggcgccggcgggtgcaggcgca 692
|||||| | ||||| |||||||| ||||||||||||||
Sbjct: 24888324 gtgcggcacgaggatcggcgccgccgggtgcaggcgca 24888287
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggcttctcccacg 560
||||| ||| |||||||||||||| ||| |||||||||
Sbjct: 24860011 gaacctctctggcatgaactcctcgggcctctcccacg 24859974
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 655 gtgcgggaggaggaacggcgccggcgggtgcaggcgca 692
|||||| | ||||| |||||||| ||||||||||||||
Sbjct: 24859876 gtgcggcacgaggatcggcgccgccgggtgcaggcgca 24859839
Score = 44.1 bits (22), Expect = 0.29
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 1331 agccgcacctcttcctgtcggccatggcggaaggactgcaccttcttggtgctgagca 1388
||||||||||| |||| ||| |||||||| ||| ||||||| |||||| | ||||||
Sbjct: 79573 agccgcacctcctcctcccggacatggcggtaggcctgcaccctcttggagttgagca 79516
Score = 44.1 bits (22), Expect = 0.29
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 1491 gcggccgcgacgcgaagatgtggtcctgggtgcgcaggacggcgtcggcggcgc 1544
|||||||||||||||| | |||||| || | || |||||||| ||||||||||
Sbjct: 63503 gcggccgcgacgcgaacacgtggtcgtgagcccggaggacggcctcggcggcgc 63556
>gb|CH401228.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000065
genomic scaffold, whole genome shotgun sequence
Length = 5026603
Score = 95.6 bits (48), Expect = 9e-017
Identities = 135/164 (82%)
Strand = Plus / Minus
Query: 1468 gatgatctcggcggccatggacggcggccgcgacgcgaagatgtggtcctgggtgcgcag 1527
|||||| |||| | ||||||| ||||||||||||||||| | |||| |||||||| ||
Sbjct: 318494 gatgatgtcggtgaccatggagcgcggccgcgacgcgaaggcgaggtcgtgggtgcggag 318435
Query: 1528 gacggcgtcggcggcgctgggcgaggacacgaacagggtgggcacggcgccgatgcggag 1587
|||||| ||||| |||| |||||||| |||| ||||||||| |||| ||||| |||||
Sbjct: 318434 gacggcctcggctgcgcgcggcgaggagacgaccagggtggggacggagccgaggcggac 318375
Query: 1588 gagcagcaggccgttgcgcccgtgcttggcgtccaggtcccgga 1631
||||| ||||||| ||| || || |||||| | ||||| ||||
Sbjct: 318374 gagcatgaggccgtcgcggccatgtttggcggcgaggtctcgga 318331
Score = 81.8 bits (41), Expect = 1e-012
Identities = 116/141 (82%)
Strand = Plus / Minus
Query: 1491 gcggccgcgacgcgaagatgtggtcctgggtgcgcaggacggcgtcggcggcgctgggcg 1550
||||||||||||||||| | |||| |||||||| |||||||| |||||||||| ||||
Sbjct: 307535 gcggccgcgacgcgaaggcgaggtcgtgggtgcggaggacggcctcggcggcgcgcggcg 307476
Query: 1551 aggacacgaacagggtgggcacggcgccgatgcggaggagcagcaggccgttgcgcccgt 1610
|||| |||| |||||||| |||| ||||| | ||| ||||| ||||||| ||| || |
Sbjct: 307475 aggagacgacgagggtggggacggagccgaggtggacgagcatgaggccgtcgcggccat 307416
Query: 1611 gcttggcgtccaggtcccgga 1631
| |||||| | ||||| ||||
Sbjct: 307415 gtttggcggcgaggtctcgga 307395
Score = 52.0 bits (26), Expect = 0.001
Identities = 83/102 (81%)
Strand = Plus / Plus
Query: 1336 cacctcttcctgtcggccatggcggaaggactgcaccttcttggtgctgagcatgtgcgt 1395
|||||| |||| |||||| |||||| ||||| |||||||||| |||||||| ||| |
Sbjct: 302224 cacctcctcctcgcggccacggcggagcgactggaccttcttggggctgagcaagtgggc 302283
Query: 1396 ggtgaggagtttcctgccctgccgccagtactcgccgtaggg 1437
|| || ||| ||||| ||| |||||||| |||||||||||
Sbjct: 302284 ggcgacgagcttcctcgccttgcgccagtagtcgccgtaggg 302325
Score = 52.0 bits (26), Expect = 0.001
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 885 cctcgaacatgtccaccaagatggccttgagattgtccgtagtgaggccgtactcttgct 944
||||||||||| ||||||||| ||||||| ||||| ||||||| ||||| || ||||
Sbjct: 295606 cctcgaacatgatcaccaagattgccttgacgttgtctctagtgagaccgtattcatgct 295665
Query: 945 gtatggagag 954
| ||||||||
Sbjct: 295666 gaatggagag 295675
Score = 50.1 bits (25), Expect = 0.005
Identities = 100/125 (80%)
Strand = Plus / Plus
Query: 836 agctcggccatgccgtactctagcgtcaggtaagatgtctctatacctgcctcgaacatg 895
|||||||||||| | ||||||||| | ||| ||||| ||| | || ||||||||||||
Sbjct: 287647 agctcggccatggcatactctagctctatgtatgatgtatctgttccagcctcgaacatg 287706
Query: 896 tccaccaagatggccttgagattgtccgtagtgaggccgtactcttgctgtatggagagc 955
| |||||| | || |||| || ||| |||||||||| |||||||| || || |||||
Sbjct: 287707 acaaccaagtttgctttgatgttatccttagtgaggccatactcttgttgaatagagagt 287766
Query: 956 agaac 960
|||||
Sbjct: 287767 agaac 287771
Score = 44.1 bits (22), Expect = 0.29
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 1491 gcggccgcgacgcgaagatgtggtcctgggtgcgcaggacggcgtcggcggcgc 1544
|||||||||||||||| | |||||| || | || |||||||| ||||||||||
Sbjct: 302379 gcggccgcgacgcgaacacgtggtcgtgagcccggaggacggcctcggcggcgc 302432
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 95.6 bits (48), Expect = 9e-017
Identities = 135/164 (82%)
Strand = Plus / Minus
Query: 1468 gatgatctcggcggccatggacggcggccgcgacgcgaagatgtggtcctgggtgcgcag 1527
|||||| |||| | ||||||| ||||||||||||||||| | |||| |||||||| ||
Sbjct: 318494 gatgatgtcggtgaccatggagcgcggccgcgacgcgaaggcgaggtcgtgggtgcggag 318435
Query: 1528 gacggcgtcggcggcgctgggcgaggacacgaacagggtgggcacggcgccgatgcggag 1587
|||||| ||||| |||| |||||||| |||| ||||||||| |||| ||||| |||||
Sbjct: 318434 gacggcctcggctgcgcgcggcgaggagacgaccagggtggggacggagccgaggcggac 318375
Query: 1588 gagcagcaggccgttgcgcccgtgcttggcgtccaggtcccgga 1631
||||| ||||||| ||| || || |||||| | ||||| ||||
Sbjct: 318374 gagcatgaggccgtcgcggccatgtttggcggcgaggtctcgga 318331
Score = 81.8 bits (41), Expect = 1e-012
Identities = 116/141 (82%)
Strand = Plus / Minus
Query: 1491 gcggccgcgacgcgaagatgtggtcctgggtgcgcaggacggcgtcggcggcgctgggcg 1550
||||||||||||||||| | |||| |||||||| |||||||| |||||||||| ||||
Sbjct: 307535 gcggccgcgacgcgaaggcgaggtcgtgggtgcggaggacggcctcggcggcgcgcggcg 307476
Query: 1551 aggacacgaacagggtgggcacggcgccgatgcggaggagcagcaggccgttgcgcccgt 1610
|||| |||| |||||||| |||| ||||| | ||| ||||| ||||||| ||| || |
Sbjct: 307475 aggagacgacgagggtggggacggagccgaggtggacgagcatgaggccgtcgcggccat 307416
Query: 1611 gcttggcgtccaggtcccgga 1631
| |||||| | ||||| ||||
Sbjct: 307415 gtttggcggcgaggtctcgga 307395
Score = 67.9 bits (34), Expect = 2e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggcttctcccacg 560
|||||||||||||||||||||||||||| |||||||||
Sbjct: 21721574 gaaccgctccggcatgaactcctccggcctctcccacg 21721537
Score = 61.9 bits (31), Expect = 1e-006
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 518 tgcacgaaccgctccggcatgaactcctccggcttctcccacg 560
|||| ||||| |||||||||||||||||||||| |||||||||
Sbjct: 23960007 tgcaggaacctctccggcatgaactcctccggcctctcccacg 23960049
Score = 52.0 bits (26), Expect = 0.001
Identities = 83/102 (81%)
Strand = Plus / Plus
Query: 1336 cacctcttcctgtcggccatggcggaaggactgcaccttcttggtgctgagcatgtgcgt 1395
|||||| |||| |||||| |||||| ||||| |||||||||| |||||||| ||| |
Sbjct: 302224 cacctcctcctcgcggccacggcggagcgactggaccttcttggggctgagcaagtgggc 302283
Query: 1396 ggtgaggagtttcctgccctgccgccagtactcgccgtaggg 1437
|| || ||| ||||| ||| |||||||| |||||||||||
Sbjct: 302284 ggcgacgagcttcctcgccttgcgccagtagtcgccgtaggg 302325
Score = 52.0 bits (26), Expect = 0.001
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 885 cctcgaacatgtccaccaagatggccttgagattgtccgtagtgaggccgtactcttgct 944
||||||||||| ||||||||| ||||||| ||||| ||||||| ||||| || ||||
Sbjct: 295606 cctcgaacatgatcaccaagattgccttgacgttgtctctagtgagaccgtattcatgct 295665
Query: 945 gtatggagag 954
| ||||||||
Sbjct: 295666 gaatggagag 295675
Score = 50.1 bits (25), Expect = 0.005
Identities = 100/125 (80%)
Strand = Plus / Plus
Query: 836 agctcggccatgccgtactctagcgtcaggtaagatgtctctatacctgcctcgaacatg 895
|||||||||||| | ||||||||| | ||| ||||| ||| | || ||||||||||||
Sbjct: 287647 agctcggccatggcatactctagctctatgtatgatgtatctgttccagcctcgaacatg 287706
Query: 896 tccaccaagatggccttgagattgtccgtagtgaggccgtactcttgctgtatggagagc 955
| |||||| | || |||| || ||| |||||||||| |||||||| || || |||||
Sbjct: 287707 acaaccaagtttgctttgatgttatccttagtgaggccatactcttgttgaatagagagt 287766
Query: 956 agaac 960
|||||
Sbjct: 287767 agaac 287771
Score = 48.1 bits (24), Expect = 0.019
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 445 cctccggccggagccgaacgggatgaac 472
|||||||||||| |||||||||||||||
Sbjct: 21721652 cctccggccggacccgaacgggatgaac 21721625
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 533 ggcatgaactcctccggcttctcccacgtcgtccggtc 570
||||||||||| |||||| ||||||||| |||| ||||
Sbjct: 24010754 ggcatgaactcgtccggcctctcccacgccgtcgggtc 24010717
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggcttctcccacg 560
||||| ||| |||||||||||||| ||| |||||||||
Sbjct: 23989925 gaacctctctggcatgaactcctcgggcctctcccacg 23989888
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 655 gtgcgggaggaggaacggcgccggcgggtgcaggcgca 692
|||||| | ||||| |||||||| ||||||||||||||
Sbjct: 23989790 gtgcggcacgaggatcggcgccgccgggtgcaggcgca 23989753
Score = 44.1 bits (22), Expect = 0.29
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 1491 gcggccgcgacgcgaagatgtggtcctgggtgcgcaggacggcgtcggcggcgc 1544
|||||||||||||||| | |||||| || | || |||||||| ||||||||||
Sbjct: 302379 gcggccgcgacgcgaacacgtggtcgtgagcccggaggacggcctcggcggcgc 302432
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
complete sequence
Length = 28434780
Score = 95.6 bits (48), Expect = 9e-017
Identities = 135/164 (82%)
Strand = Plus / Minus
Query: 1468 gatgatctcggcggccatggacggcggccgcgacgcgaagatgtggtcctgggtgcgcag 1527
|||||| |||| | ||||||| ||||||||||||||||| | |||| |||||||| ||
Sbjct: 313010 gatgatgtcggtgaccatggagcgcggccgcgacgcgaaggcgaggtcgtgggtgcggag 312951
Query: 1528 gacggcgtcggcggcgctgggcgaggacacgaacagggtgggcacggcgccgatgcggag 1587
|||||| ||||| |||| |||||||| |||| ||||||||| |||| ||||| |||||
Sbjct: 312950 gacggcctcggctgcgcgcggcgaggagacgaccagggtggggacggagccgaggcggac 312891
Query: 1588 gagcagcaggccgttgcgcccgtgcttggcgtccaggtcccgga 1631
||||| ||||||| ||| || || |||||| | ||||| ||||
Sbjct: 312890 gagcatgaggccgtcgcggccatgtttggcggcgaggtctcgga 312847
Score = 81.8 bits (41), Expect = 1e-012
Identities = 116/141 (82%)
Strand = Plus / Minus
Query: 1491 gcggccgcgacgcgaagatgtggtcctgggtgcgcaggacggcgtcggcggcgctgggcg 1550
||||||||||||||||| | |||| |||||||| |||||||| |||||||||| ||||
Sbjct: 302233 gcggccgcgacgcgaaggcgaggtcgtgggtgcggaggacggcctcggcggcgcgcggcg 302174
Query: 1551 aggacacgaacagggtgggcacggcgccgatgcggaggagcagcaggccgttgcgcccgt 1610
|||| |||| |||||||| |||| ||||| | ||| ||||| ||||||| ||| || |
Sbjct: 302173 aggagacgacgagggtggggacggagccgaggtggacgagcatgaggccgtcgcggccat 302114
Query: 1611 gcttggcgtccaggtcccgga 1631
| |||||| | ||||| ||||
Sbjct: 302113 gtttggcggcgaggtctcgga 302093
Score = 67.9 bits (34), Expect = 2e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggcttctcccacg 560
|||||||||||||||||||||||||||| |||||||||
Sbjct: 22870126 gaaccgctccggcatgaactcctccggcctctcccacg 22870089
Score = 61.9 bits (31), Expect = 1e-006
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 518 tgcacgaaccgctccggcatgaactcctccggcttctcccacg 560
|||| ||||| |||||||||||||||||||||| |||||||||
Sbjct: 25102789 tgcaggaacctctccggcatgaactcctccggcctctcccacg 25102831
Score = 52.0 bits (26), Expect = 0.001
Identities = 83/102 (81%)
Strand = Plus / Plus
Query: 1336 cacctcttcctgtcggccatggcggaaggactgcaccttcttggtgctgagcatgtgcgt 1395
|||||| |||| |||||| |||||| ||||| |||||||||| |||||||| ||| |
Sbjct: 296922 cacctcctcctcgcggccacggcggagcgactggaccttcttggggctgagcaagtgggc 296981
Query: 1396 ggtgaggagtttcctgccctgccgccagtactcgccgtaggg 1437
|| || ||| ||||| ||| |||||||| |||||||||||
Sbjct: 296982 ggcgacgagcttcctcgccttgcgccagtagtcgccgtaggg 297023
Score = 52.0 bits (26), Expect = 0.001
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 885 cctcgaacatgtccaccaagatggccttgagattgtccgtagtgaggccgtactcttgct 944
||||||||||| ||||||||| ||||||| ||||| ||||||| ||||| || ||||
Sbjct: 290943 cctcgaacatgatcaccaagattgccttgacgttgtctctagtgagaccgtattcatgct 291002
Query: 945 gtatggagag 954
| ||||||||
Sbjct: 291003 gaatggagag 291012
Score = 50.1 bits (25), Expect = 0.005
Identities = 100/125 (80%)
Strand = Plus / Plus
Query: 836 agctcggccatgccgtactctagcgtcaggtaagatgtctctatacctgcctcgaacatg 895
|||||||||||| | ||||||||| | ||| ||||| ||| | || ||||||||||||
Sbjct: 282984 agctcggccatggcatactctagctctatgtatgatgtatctgttccagcctcgaacatg 283043
Query: 896 tccaccaagatggccttgagattgtccgtagtgaggccgtactcttgctgtatggagagc 955
| |||||| | || |||| || ||| |||||||||| |||||||| || || |||||
Sbjct: 283044 acaaccaagtttgctttgatgttatccttagtgaggccatactcttgttgaatagagagt 283103
Query: 956 agaac 960
|||||
Sbjct: 283104 agaac 283108
Score = 48.1 bits (24), Expect = 0.019
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 445 cctccggccggagccgaacgggatgaac 472
|||||||||||| |||||||||||||||
Sbjct: 22870204 cctccggccggacccgaacgggatgaac 22870177
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 533 ggcatgaactcctccggcttctcccacgtcgtccggtc 570
||||||||||| |||||| ||||||||| |||| ||||
Sbjct: 25149169 ggcatgaactcgtccggcctctcccacgccgtcgggtc 25149132
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggcttctcccacg 560
||||| ||| |||||||||||||| ||| |||||||||
Sbjct: 25126546 gaacctctctggcatgaactcctcgggcctctcccacg 25126509
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 655 gtgcgggaggaggaacggcgccggcgggtgcaggcgca 692
|||||| | ||||| |||||||| ||||||||||||||
Sbjct: 25126411 gtgcggcacgaggatcggcgccgccgggtgcaggcgca 25126374
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggcttctcccacg 560
||||| ||| |||||||||||||| ||| |||||||||
Sbjct: 25098098 gaacctctctggcatgaactcctcgggcctctcccacg 25098061
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 655 gtgcgggaggaggaacggcgccggcgggtgcaggcgca 692
|||||| | ||||| |||||||| ||||||||||||||
Sbjct: 25097963 gtgcggcacgaggatcggcgccgccgggtgcaggcgca 25097926
Score = 44.1 bits (22), Expect = 0.29
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 1331 agccgcacctcttcctgtcggccatggcggaaggactgcaccttcttggtgctgagca 1388
||||||||||| |||| ||| |||||||| ||| ||||||| |||||| | ||||||
Sbjct: 313147 agccgcacctcctcctcccggacatggcggtaggcctgcaccctcttggagttgagca 313090
Score = 44.1 bits (22), Expect = 0.29
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 1491 gcggccgcgacgcgaagatgtggtcctgggtgcgcaggacggcgtcggcggcgc 1544
|||||||||||||||| | |||||| || | || |||||||| ||||||||||
Sbjct: 297077 gcggccgcgacgcgaacacgtggtcgtgagcccggaggacggcctcggcggcgc 297130
>gb|AACV01017101.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017101, whole
genome shotgun sequence
Length = 12787
Score = 81.8 bits (41), Expect = 1e-012
Identities = 116/141 (82%)
Strand = Plus / Plus
Query: 1491 gcggccgcgacgcgaagatgtggtcctgggtgcgcaggacggcgtcggcggcgctgggcg 1550
||||||||||||||||| | |||| |||||||| |||||||| |||||||||| ||||
Sbjct: 1500 gcggccgcgacgcgaaggcgaggtcgtgggtgcggaggacggcctcggcggcgcgcggcg 1559
Query: 1551 aggacacgaacagggtgggcacggcgccgatgcggaggagcagcaggccgttgcgcccgt 1610
|||| |||| |||||||| |||| ||||| | ||| ||||| ||||||| ||| || |
Sbjct: 1560 aggagacgacgagggtggggacggagccgaggtggacgagcatgaggccgtcgcggccat 1619
Query: 1611 gcttggcgtccaggtcccgga 1631
| |||||| | ||||| ||||
Sbjct: 1620 gtttggcggcgaggtctcgga 1640
Score = 52.0 bits (26), Expect = 0.001
Identities = 83/102 (81%)
Strand = Plus / Minus
Query: 1336 cacctcttcctgtcggccatggcggaaggactgcaccttcttggtgctgagcatgtgcgt 1395
|||||| |||| |||||| |||||| ||||| |||||||||| |||||||| ||| |
Sbjct: 6811 cacctcctcctcgcggccacggcggagcgactggaccttcttggggctgagcaagtgggc 6752
Query: 1396 ggtgaggagtttcctgccctgccgccagtactcgccgtaggg 1437
|| || ||| ||||| ||| |||||||| |||||||||||
Sbjct: 6751 ggcgacgagcttcctcgccttgcgccagtagtcgccgtaggg 6710
Score = 44.1 bits (22), Expect = 0.29
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 1491 gcggccgcgacgcgaagatgtggtcctgggtgcgcaggacggcgtcggcggcgc 1544
|||||||||||||||| | |||||| || | || |||||||| ||||||||||
Sbjct: 6656 gcggccgcgacgcgaacacgtggtcgtgagcccggaggacggcctcggcggcgc 6603
>ref|XM_479695.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1587
Score = 81.8 bits (41), Expect = 1e-012
Identities = 116/141 (82%)
Strand = Plus / Minus
Query: 1491 gcggccgcgacgcgaagatgtggtcctgggtgcgcaggacggcgtcggcggcgctgggcg 1550
||||||||||||||||| | |||| |||||||| |||||||| |||||||||| ||||
Sbjct: 385 gcggccgcgacgcgaaggcgaggtcgtgggtgcggaggacggcctcggcggcgcgcggcg 326
Query: 1551 aggacacgaacagggtgggcacggcgccgatgcggaggagcagcaggccgttgcgcccgt 1610
|||| |||| |||||||| |||| ||||| | ||| ||||| ||||||| ||| || |
Sbjct: 325 aggagacgacgagggtggggacggagccgaggtggacgagcatgaggccgtcgcggccat 266
Query: 1611 gcttggcgtccaggtcccgga 1631
| |||||| | ||||| ||||
Sbjct: 265 gtttggcggcgaggtctcgga 245
>ref|NT_107126.1| Oryza sativa (japonica cultivar-group)
Length = 462452
Score = 73.8 bits (37), Expect = 3e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 1364 gactgcaccttcttggtgctgagcatgtgcgtggtgaggagtttcctgccctgccgccag 1423
|||||||||||||| | ||||||| ||||||||||| ||| ||||| |||||||||||
Sbjct: 53520 gactgcaccttcttcgcactgagcaggtgcgtggtgacgagcttcctagcctgccgccag 53579
Query: 1424 tactcgccgtagggcacgaac 1444
| |||||||||||| |||||
Sbjct: 53580 tggtcgccgtagggcgcgaac 53600
>gb|AC135512.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0057M06, complete sequence
Length = 147673
Score = 73.8 bits (37), Expect = 3e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 1364 gactgcaccttcttggtgctgagcatgtgcgtggtgaggagtttcctgccctgccgccag 1423
|||||||||||||| | ||||||| ||||||||||| ||| ||||| |||||||||||
Sbjct: 53648 gactgcaccttcttcgcactgagcaggtgcgtggtgacgagcttcctagcctgccgccag 53707
Query: 1424 tactcgccgtagggcacgaac 1444
| |||||||||||| |||||
Sbjct: 53708 tggtcgccgtagggcgcgaac 53728
>gb|AACV01023036.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg023036, whole
genome shotgun sequence
Length = 40873
Score = 73.8 bits (37), Expect = 3e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 1364 gactgcaccttcttggtgctgagcatgtgcgtggtgaggagtttcctgccctgccgccag 1423
|||||||||||||| | ||||||| ||||||||||| ||| ||||| |||||||||||
Sbjct: 12339 gactgcaccttcttcgcactgagcaggtgcgtggtgacgagcttcctagcctgccgccag 12398
Query: 1424 tactcgccgtagggcacgaac 1444
| |||||||||||| |||||
Sbjct: 12399 tggtcgccgtagggcgcgaac 12419
>gb|CH401263.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000100 genomic
scaffold, whole genome shotgun sequence
Length = 6309838
Score = 73.8 bits (37), Expect = 3e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 1364 gactgcaccttcttggtgctgagcatgtgcgtggtgaggagtttcctgccctgccgccag 1423
|||||||||||||| | ||||||| ||||||||||| ||| ||||| |||||||||||
Sbjct: 4548495 gactgcaccttcttcgcactgagcaggtgcgtggtgacgagcttcctagcctgccgccag 4548554
Query: 1424 tactcgccgtagggcacgaac 1444
| |||||||||||| |||||
Sbjct: 4548555 tggtcgccgtagggcgcgaac 4548575
Score = 52.0 bits (26), Expect = 0.001
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 1493 ggccgcgacgcgaagatgtggtcctgggtgcgcaggacggcgtcggcggcgctgggcgag 1552
|||||||||||||| | || ||| || |||||||||| ||| |||||||| | |||||||
Sbjct: 4373430 ggccgcgacgcgaacacgtcgtcatgcgtgcgcaggatggcctcggcggcacagggcgag 4373489
Query: 1553 ga 1554
||
Sbjct: 4373490 ga 4373491
Score = 50.1 bits (25), Expect = 0.005
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1648 ggcgccgatgaggtggaggtggccgatga 1676
||||||||||||||||||||| |||||||
Sbjct: 4373585 ggcgccgatgaggtggaggtgcccgatga 4373613
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome shotgun
sequence
Length = 22593549
Score = 73.8 bits (37), Expect = 3e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 1364 gactgcaccttcttggtgctgagcatgtgcgtggtgaggagtttcctgccctgccgccag 1423
|||||||||||||| | ||||||| ||||||||||| ||| ||||| |||||||||||
Sbjct: 12403539 gactgcaccttcttcgcactgagcaggtgcgtggtgacgagcttcctagcctgccgccag 12403598
Query: 1424 tactcgccgtagggcacgaac 1444
| |||||||||||| |||||
Sbjct: 12403599 tggtcgccgtagggcgcgaac 12403619
Score = 52.0 bits (26), Expect = 0.001
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 1493 ggccgcgacgcgaagatgtggtcctgggtgcgcaggacggcgtcggcggcgctgggcgag 1552
|||||||||||||| | || ||| || |||||||||| ||| |||||||| | |||||||
Sbjct: 12228474 ggccgcgacgcgaacacgtcgtcatgcgtgcgcaggatggcctcggcggcacagggcgag 12228533
Query: 1553 ga 1554
||
Sbjct: 12228534 ga 12228535
Score = 50.1 bits (25), Expect = 0.005
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1648 ggcgccgatgaggtggaggtggccgatga 1676
||||||||||||||||||||| |||||||
Sbjct: 12228629 ggcgccgatgaggtggaggtgcccgatga 12228657
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 73.8 bits (37), Expect = 3e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 1364 gactgcaccttcttggtgctgagcatgtgcgtggtgaggagtttcctgccctgccgccag 1423
|||||||||||||| | ||||||| ||||||||||| ||| ||||| |||||||||||
Sbjct: 15548238 gactgcaccttcttcgcactgagcaggtgcgtggtgacgagcttcctagcctgccgccag 15548297
Query: 1424 tactcgccgtagggcacgaac 1444
| |||||||||||| |||||
Sbjct: 15548298 tggtcgccgtagggcgcgaac 15548318
Score = 52.0 bits (26), Expect = 0.001
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 1493 ggccgcgacgcgaagatgtggtcctgggtgcgcaggacggcgtcggcggcgctgggcgag 1552
|||||||||||||| | || ||| || |||||||||| ||| |||||||| | |||||||
Sbjct: 15380829 ggccgcgacgcgaacacgtcgtcatgcgtgcgcaggatggcctcggcggcacagggcgag 15380888
Query: 1553 ga 1554
||
Sbjct: 15380889 ga 15380890
Score = 50.1 bits (25), Expect = 0.005
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1648 ggcgccgatgaggtggaggtggccgatga 1676
||||||||||||||||||||| |||||||
Sbjct: 15380984 ggcgccgatgaggtggaggtgcccgatga 15381012
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 73.8 bits (37), Expect = 3e-010
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 1364 gactgcaccttcttggtgctgagcatgtgcgtggtgaggagtttcctgccctgccgccag 1423
|||||||||||||| | ||||||| ||||||||||| ||| ||||| |||||||||||
Sbjct: 15635757 gactgcaccttcttcgcactgagcaggtgcgtggtgacgagcttcctagcctgccgccag 15635816
Query: 1424 tactcgccgtagggcacgaac 1444
| |||||||||||| |||||
Sbjct: 15635817 tggtcgccgtagggcgcgaac 15635837
Score = 52.0 bits (26), Expect = 0.001
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 1493 ggccgcgacgcgaagatgtggtcctgggtgcgcaggacggcgtcggcggcgctgggcgag 1552
|||||||||||||| | || ||| || |||||||||| ||| |||||||| | |||||||
Sbjct: 15463766 ggccgcgacgcgaacacgtcgtcatgcgtgcgcaggatggcctcggcggcacagggcgag 15463825
Query: 1553 ga 1554
||
Sbjct: 15463826 ga 15463827
Score = 50.1 bits (25), Expect = 0.005
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1648 ggcgccgatgaggtggaggtggccgatga 1676
||||||||||||||||||||| |||||||
Sbjct: 15463921 ggcgccgatgaggtggaggtgcccgatga 15463949
>gb|CB654797.1|CB654797 OSJNEc07J11.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc07J11 5', mRNA sequence
Length = 733
Score = 67.9 bits (34), Expect = 2e-008
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 523 gaaccgctccggcatgaactcctccggcttctcccacg 560
|||||||||||||||||||||||||||| |||||||||
Sbjct: 411 gaaccgctccggcatgaactcctccggcctctcccacg 448
Score = 48.1 bits (24), Expect = 0.019
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 445 cctccggccggagccgaacgggatgaac 472
|||||||||||| |||||||||||||||
Sbjct: 333 cctccggccggacccgaacgggatgaac 360
>gb|CB654798.1|CB654798 OSJNEc07J11.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc07J11 3', mRNA sequence
Length = 752
Score = 67.9 bits (34), Expect = 2e-008
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 523 gaaccgctccggcatgaactcctccggcttctcccacg 560
|||||||||||||||||||||||||||| |||||||||
Sbjct: 430 gaaccgctccggcatgaactcctccggcctctcccacg 467
Score = 48.1 bits (24), Expect = 0.019
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 445 cctccggccggagccgaacgggatgaac 472
|||||||||||| |||||||||||||||
Sbjct: 352 cctccggccggacccgaacgggatgaac 379
>dbj|AK072861.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141H24, full
insert sequence
Length = 1693
Score = 67.9 bits (34), Expect = 2e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggcttctcccacg 560
|||||||||||||||||||||||||||| |||||||||
Sbjct: 1268 gaaccgctccggcatgaactcctccggcctctcccacg 1231
Score = 48.1 bits (24), Expect = 0.019
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 445 cctccggccggagccgaacgggatgaac 472
|||||||||||| |||||||||||||||
Sbjct: 1346 cctccggccggacccgaacgggatgaac 1319
>dbj|AP006461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
clone:P0104B02
Length = 169588
Score = 67.9 bits (34), Expect = 2e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggcttctcccacg 560
|||||||||||||||||||||||||||| |||||||||
Sbjct: 43964 gaaccgctccggcatgaactcctccggcctctcccacg 43927
Score = 48.1 bits (24), Expect = 0.019
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 445 cctccggccggagccgaacgggatgaac 472
|||||||||||| |||||||||||||||
Sbjct: 44042 cctccggccggacccgaacgggatgaac 44015
>gb|AACV01018675.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018675, whole
genome shotgun sequence
Length = 33710
Score = 67.9 bits (34), Expect = 2e-008
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 523 gaaccgctccggcatgaactcctccggcttctcccacg 560
|||||||||||||||||||||||||||| |||||||||
Sbjct: 31233 gaaccgctccggcatgaactcctccggcctctcccacg 31270
Score = 48.1 bits (24), Expect = 0.019
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 445 cctccggccggagccgaacgggatgaac 472
|||||||||||| |||||||||||||||
Sbjct: 31155 cctccggccggacccgaacgggatgaac 31182
>ref|XM_482839.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1694
Score = 67.9 bits (34), Expect = 2e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggcttctcccacg 560
|||||||||||||||||||||||||||| |||||||||
Sbjct: 1269 gaaccgctccggcatgaactcctccggcctctcccacg 1232
Score = 48.1 bits (24), Expect = 0.019
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 445 cctccggccggagccgaacgggatgaac 472
|||||||||||| |||||||||||||||
Sbjct: 1347 cctccggccggacccgaacgggatgaac 1320
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067 genomic
scaffold, whole genome shotgun sequence
Length = 19501165
Score = 67.9 bits (34), Expect = 2e-008
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggcttctcccacg 560
|||||||||||||||||||||||||||| |||||||||
Sbjct: 14119568 gaaccgctccggcatgaactcctccggcctctcccacg 14119531
Score = 61.9 bits (31), Expect = 1e-006
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 518 tgcacgaaccgctccggcatgaactcctccggcttctcccacg 560
|||| ||||| |||||||||||||||||||||| |||||||||
Sbjct: 16358001 tgcaggaacctctccggcatgaactcctccggcctctcccacg 16358043
Score = 48.1 bits (24), Expect = 0.019
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 445 cctccggccggagccgaacgggatgaac 472
|||||||||||| |||||||||||||||
Sbjct: 14119646 cctccggccggacccgaacgggatgaac 14119619
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 533 ggcatgaactcctccggcttctcccacgtcgtccggtc 570
||||||||||| |||||| ||||||||| |||| ||||
Sbjct: 16408748 ggcatgaactcgtccggcctctcccacgccgtcgggtc 16408711
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggcttctcccacg 560
||||| ||| |||||||||||||| ||| |||||||||
Sbjct: 16387919 gaacctctctggcatgaactcctcgggcctctcccacg 16387882
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 655 gtgcgggaggaggaacggcgccggcgggtgcaggcgca 692
|||||| | ||||| |||||||| ||||||||||||||
Sbjct: 16387784 gtgcggcacgaggatcggcgccgccgggtgcaggcgca 16387747
>dbj|AK110565.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-D04, full
insert sequence
Length = 1862
Score = 63.9 bits (32), Expect = 3e-007
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 670 cggcgccggcgggtgcaggcgcagcgtctccttgat 705
|||||||||||||||||| |||||||||||||||||
Sbjct: 1114 cggcgccggcgggtgcagccgcagcgtctccttgat 1079
Score = 52.0 bits (26), Expect = 0.001
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 431 atcccggggcagatcctccggccggagccgaacgggatgaac 472
||||||||||| |||||||||||| |||||||||||||||
Sbjct: 1362 atcccggggcacgccctccggccggacccgaacgggatgaac 1321
>dbj|AP005308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
clone:P0047B10
Length = 158798
Score = 63.9 bits (32), Expect = 3e-007
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 670 cggcgccggcgggtgcaggcgcagcgtctccttgat 705
|||||||||||||||||| |||||||||||||||||
Sbjct: 13424 cggcgccggcgggtgcagccgcagcgtctccttgat 13459
Score = 52.0 bits (26), Expect = 0.001
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 431 atcccggggcagatcctccggccggagccgaacgggatgaac 472
||||||||||| |||||||||||| |||||||||||||||
Sbjct: 13176 atcccggggcacgccctccggccggacccgaacgggatgaac 13217
>dbj|AP005575.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:OJ1596_C06
Length = 124721
Score = 63.9 bits (32), Expect = 3e-007
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 670 cggcgccggcgggtgcaggcgcagcgtctccttgat 705
|||||||||||||||||| |||||||||||||||||
Sbjct: 72869 cggcgccggcgggtgcagccgcagcgtctccttgat 72904
Score = 52.0 bits (26), Expect = 0.001
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 431 atcccggggcagatcctccggccggagccgaacgggatgaac 472
||||||||||| |||||||||||| |||||||||||||||
Sbjct: 72621 atcccggggcacgccctccggccggacccgaacgggatgaac 72662
>gb|AACV01020124.1| Oryza sativa (japonica cultivar-group) chromosome 9 Ctg020124, whole
genome shotgun sequence
Length = 34569
Score = 63.9 bits (32), Expect = 3e-007
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 670 cggcgccggcgggtgcaggcgcagcgtctccttgat 705
|||||||||||||||||| |||||||||||||||||
Sbjct: 16617 cggcgccggcgggtgcagccgcagcgtctccttgat 16582
Score = 52.0 bits (26), Expect = 0.001
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 431 atcccggggcagatcctccggccggagccgaacgggatgaac 472
||||||||||| |||||||||||| |||||||||||||||
Sbjct: 16868 atcccggggcacgccctccggccggacccgaacgggatgaac 16827
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 63.9 bits (32), Expect = 3e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 1413 cctgccgccagtactcgccgtagggcacgaacgcgacgtc 1452
|||| ||||||||||||||||||||| |||||||||||||
Sbjct: 7068759 cctggcgccagtactcgccgtagggcgcgaacgcgacgtc 7068720
Score = 61.9 bits (31), Expect = 1e-006
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 1418 cgccagtactcgccgtagggcacgaacgcgacgtc 1452
||||||||||||||||||||| |||||||||||||
Sbjct: 7058625 cgccagtactcgccgtagggcgcgaacgcgacgtc 7058591
Score = 52.0 bits (26), Expect = 0.001
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 430 catcccggggcagatcctccggccggagccgaacggga 467
|||||||| ||| |||||||||||||| ||||||||||
Sbjct: 29066633 catcccggcgcacatcctccggccggacccgaacggga 29066596
Score = 50.1 bits (25), Expect = 0.005
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 431 atcccggggcagatcctccggccggagccgaacgggatgaa 471
||||||||||| | |||||| ||||| ||||||||||||||
Sbjct: 21417377 atcccggggcacagcctccgcccggacccgaacgggatgaa 21417417
Score = 46.1 bits (23), Expect = 0.074
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 675 ccggcgggtgcaggcgcagcgtctccttgat 705
||||||||||||| || ||||||||||||||
Sbjct: 29066391 ccggcgggtgcagccggagcgtctccttgat 29066361
Score = 44.1 bits (22), Expect = 0.29
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 1413 cctgccgccagtactcgccgtagggcacgaacgc 1446
|||| |||||| |||||||||||||| |||||||
Sbjct: 7050323 cctggcgccagaactcgccgtagggcgcgaacgc 7050290
>ref|NT_107084.1| Oryza sativa (japonica cultivar-group)
Length = 4175757
Score = 63.9 bits (32), Expect = 3e-007
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 670 cggcgccggcgggtgcaggcgcagcgtctccttgat 705
|||||||||||||||||| |||||||||||||||||
Sbjct: 2356533 cggcgccggcgggtgcagccgcagcgtctccttgat 2356568
Score = 52.0 bits (26), Expect = 0.001
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 431 atcccggggcagatcctccggccggagccgaacgggatgaac 472
||||||||||| |||||||||||| |||||||||||||||
Sbjct: 2356285 atcccggggcacgccctccggccggacccgaacgggatgaac 2356326
Score = 48.1 bits (24), Expect = 0.019
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggc 550
||||| ||||||||||||||||||||||
Sbjct: 2033343 gaacctctccggcatgaactcctccggc 2033316
Score = 48.1 bits (24), Expect = 0.019
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggc 550
||||| ||||||||||||||||||||||
Sbjct: 2027062 gaacctctccggcatgaactcctccggc 2027035
Score = 48.1 bits (24), Expect = 0.019
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 523 gaaccgctccggcatgaactcctccggc 550
||||| ||||||||||||||||||||||
Sbjct: 1998970 gaacctctccggcatgaactcctccggc 1998997
>ref|NM_188581.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1656
Score = 63.9 bits (32), Expect = 3e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 1413 cctgccgccagtactcgccgtagggcacgaacgcgacgtc 1452
|||| ||||||||||||||||||||| |||||||||||||
Sbjct: 439 cctggcgccagtactcgccgtagggcgcgaacgcgacgtc 400
>ref|NT_036312.3| Oryza sativa (japonica cultivar-group)
Length = 10050053
Score = 63.9 bits (32), Expect = 3e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 1413 cctgccgccagtactcgccgtagggcacgaacgcgacgtc 1452
|||| ||||||||||||||||||||| |||||||||||||
Sbjct: 7068599 cctggcgccagtactcgccgtagggcgcgaacgcgacgtc 7068560
Score = 61.9 bits (31), Expect = 1e-006
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 1418 cgccagtactcgccgtagggcacgaacgcgacgtc 1452
||||||||||||||||||||| |||||||||||||
Sbjct: 7058465 cgccagtactcgccgtagggcgcgaacgcgacgtc 7058431
Score = 44.1 bits (22), Expect = 0.29
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 1413 cctgccgccagtactcgccgtagggcacgaacgc 1446
|||| |||||| |||||||||||||| |||||||
Sbjct: 7050163 cctggcgccagaactcgccgtagggcgcgaacgc 7050130
>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0452F10
Length = 145120
Score = 63.9 bits (32), Expect = 3e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 1413 cctgccgccagtactcgccgtagggcacgaacgcgacgtc 1452
|||| ||||||||||||||||||||| |||||||||||||
Sbjct: 58557 cctggcgccagtactcgccgtagggcgcgaacgcgacgtc 58518
Score = 61.9 bits (31), Expect = 1e-006
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 1418 cgccagtactcgccgtagggcacgaacgcgacgtc 1452
||||||||||||||||||||| |||||||||||||
Sbjct: 48423 cgccagtactcgccgtagggcgcgaacgcgacgtc 48389
Score = 44.1 bits (22), Expect = 0.29
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 1413 cctgccgccagtactcgccgtagggcacgaacgc 1446
|||| |||||| |||||||||||||| |||||||
Sbjct: 40121 cctggcgccagaactcgccgtagggcgcgaacgc 40088
>gb|CH401242.1| Oryza sativa (japonica cultivar-group) chromosome 9 scaffold000079 genomic
scaffold, whole genome shotgun sequence
Length = 12069826
Score = 63.9 bits (32), Expect = 3e-007
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 670 cggcgccggcgggtgcaggcgcagcgtctccttgat 705
|||||||||||||||||| |||||||||||||||||
Sbjct: 6007808 cggcgccggcgggtgcagccgcagcgtctccttgat 6007843
Score = 52.0 bits (26), Expect = 0.001
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 434 ccggggcagatcctccggccggagccgaacggga 467
||||||||||||| |||||||| |||||||||||
Sbjct: 9957546 ccggggcagatccgccggccggcgccgaacggga 9957513
Score = 52.0 bits (26), Expect = 0.001
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggcttctcccacgtcgtccggtccctcccgagcgc 582
||||||||||||| ||||||||||||| |||||| || |||||||||||| |||
Sbjct: 9957463 gaaccgctccggccggaactcctccggcgagccccacgccgcggggtccctcccgatcgc 9957404
Query: 583 ccaggcgttgacga 596
||| ||||||||||
Sbjct: 9957403 ccacgcgttgacga 9957390
Score = 52.0 bits (26), Expect = 0.001
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 431 atcccggggcagatcctccggccggagccgaacgggatgaac 472
||||||||||| |||||||||||| |||||||||||||||
Sbjct: 6007557 atcccggggcacgccctccggccggacccgaacgggatgaac 6007598
Score = 48.1 bits (24), Expect = 0.019
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggc 550
||||| ||||||||||||||||||||||
Sbjct: 5663590 gaacctctccggcatgaactcctccggc 5663563
Score = 48.1 bits (24), Expect = 0.019
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 523 gaaccgctccggcatgaactcctccggc 550
||||| ||||||||||||||||||||||
Sbjct: 5619762 gaacctctccggcatgaactcctccggc 5619789
Score = 44.1 bits (22), Expect = 0.29
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 673 cgccggcgggtgcaggcgcagcgtctccttgatg 706
||||||||||| ||| ||||||||||||| ||||
Sbjct: 3536746 cgccggcgggtacagccgcagcgtctcctggatg 3536779
>gb|CM000146.1| Oryza sativa (japonica cultivar-group) chromosome 9, whole genome shotgun
sequence
Length = 21543637
Score = 63.9 bits (32), Expect = 3e-007
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 670 cggcgccggcgggtgcaggcgcagcgtctccttgat 705
|||||||||||||||||| |||||||||||||||||
Sbjct: 15481619 cggcgccggcgggtgcagccgcagcgtctccttgat 15481654
Score = 54.0 bits (27), Expect = 3e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 434 ccggggcagatcctccggccggagccgaacgggatgaac 472
|||||||| ||||||||||| |||||||| |||||||||
Sbjct: 4723811 ccggggcacatcctccggccagagccgaaagggatgaac 4723849
Score = 52.0 bits (26), Expect = 0.001
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 434 ccggggcagatcctccggccggagccgaacggga 467
||||||||||||| |||||||| |||||||||||
Sbjct: 19431357 ccggggcagatccgccggccggcgccgaacggga 19431324
Score = 52.0 bits (26), Expect = 0.001
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggcttctcccacgtcgtccggtccctcccgagcgc 582
||||||||||||| ||||||||||||| |||||| || |||||||||||| |||
Sbjct: 19431274 gaaccgctccggccggaactcctccggcgagccccacgccgcggggtccctcccgatcgc 19431215
Query: 583 ccaggcgttgacga 596
||| ||||||||||
Sbjct: 19431214 ccacgcgttgacga 19431201
Score = 52.0 bits (26), Expect = 0.001
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 431 atcccggggcagatcctccggccggagccgaacgggatgaac 472
||||||||||| |||||||||||| |||||||||||||||
Sbjct: 15481368 atcccggggcacgccctccggccggacccgaacgggatgaac 15481409
Score = 48.1 bits (24), Expect = 0.019
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggc 550
||||| ||||||||||||||||||||||
Sbjct: 15137401 gaacctctccggcatgaactcctccggc 15137374
Score = 48.1 bits (24), Expect = 0.019
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 523 gaaccgctccggcatgaactcctccggc 550
||||| ||||||||||||||||||||||
Sbjct: 15093573 gaacctctccggcatgaactcctccggc 15093600
Score = 46.1 bits (23), Expect = 0.074
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 520 cacgaaccgctccggcatgaactcctccggc 550
|||||||||||||||| |||||||||||||
Sbjct: 4013000 cacgaaccgctccggccggaactcctccggc 4012970
Score = 44.1 bits (22), Expect = 0.29
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 673 cgccggcgggtgcaggcgcagcgtctccttgatg 706
||||||||||| ||| ||||||||||||| ||||
Sbjct: 13010557 cgccggcgggtacagccgcagcgtctcctggatg 13010590
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 63.9 bits (32), Expect = 3e-007
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 1413 cctgccgccagtactcgccgtagggcacgaacgcgacgtc 1452
|||| ||||||||||||||||||||| |||||||||||||
Sbjct: 7070977 cctggcgccagtactcgccgtagggcgcgaacgcgacgtc 7070938
Score = 61.9 bits (31), Expect = 1e-006
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 1418 cgccagtactcgccgtagggcacgaacgcgacgtc 1452
||||||||||||||||||||| |||||||||||||
Sbjct: 7060843 cgccagtactcgccgtagggcgcgaacgcgacgtc 7060809
Score = 52.0 bits (26), Expect = 0.001
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 430 catcccggggcagatcctccggccggagccgaacggga 467
|||||||| ||| |||||||||||||| ||||||||||
Sbjct: 28985963 catcccggcgcacatcctccggccggacccgaacggga 28985926
Score = 50.1 bits (25), Expect = 0.005
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 431 atcccggggcagatcctccggccggagccgaacgggatgaa 471
||||||||||| | |||||| ||||| ||||||||||||||
Sbjct: 21338660 atcccggggcacagcctccgcccggacccgaacgggatgaa 21338700
Score = 46.1 bits (23), Expect = 0.074
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 675 ccggcgggtgcaggcgcagcgtctccttgat 705
||||||||||||| || ||||||||||||||
Sbjct: 28985721 ccggcgggtgcagccggagcgtctccttgat 28985691
Score = 44.1 bits (22), Expect = 0.29
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 1413 cctgccgccagtactcgccgtagggcacgaacgc 1446
|||| |||||| |||||||||||||| |||||||
Sbjct: 7052541 cctggcgccagaactcgccgtagggcgcgaacgc 7052508
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 63.9 bits (32), Expect = 3e-007
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 670 cggcgccggcgggtgcaggcgcagcgtctccttgat 705
|||||||||||||||||| |||||||||||||||||
Sbjct: 16664730 cggcgccggcgggtgcagccgcagcgtctccttgat 16664765
Score = 54.0 bits (27), Expect = 3e-004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 434 ccggggcagatcctccggccggagccgaacgggatgaac 472
|||||||| ||||||||||| |||||||| |||||||||
Sbjct: 5589579 ccggggcacatcctccggccagagccgaaagggatgaac 5589617
Score = 52.0 bits (26), Expect = 0.001
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 434 ccggggcagatcctccggccggagccgaacggga 467
||||||||||||| |||||||| |||||||||||
Sbjct: 20474374 ccggggcagatccgccggccggcgccgaacggga 20474341
Score = 52.0 bits (26), Expect = 0.001
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggcttctcccacgtcgtccggtccctcccgagcgc 582
||||||||||||| ||||||||||||| |||||| || |||||||||||| |||
Sbjct: 20474291 gaaccgctccggccggaactcctccggcgagccccacgccgcggggtccctcccgatcgc 20474232
Query: 583 ccaggcgttgacga 596
||| ||||||||||
Sbjct: 20474231 ccacgcgttgacga 20474218
Score = 52.0 bits (26), Expect = 0.001
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 431 atcccggggcagatcctccggccggagccgaacgggatgaac 472
||||||||||| |||||||||||| |||||||||||||||
Sbjct: 16664482 atcccggggcacgccctccggccggacccgaacgggatgaac 16664523
Score = 48.1 bits (24), Expect = 0.019
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggc 550
||||| ||||||||||||||||||||||
Sbjct: 16341540 gaacctctccggcatgaactcctccggc 16341513
Score = 48.1 bits (24), Expect = 0.019
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggc 550
||||| ||||||||||||||||||||||
Sbjct: 16335259 gaacctctccggcatgaactcctccggc 16335232
Score = 48.1 bits (24), Expect = 0.019
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 523 gaaccgctccggcatgaactcctccggc 550
||||| ||||||||||||||||||||||
Sbjct: 16307167 gaacctctccggcatgaactcctccggc 16307194
Score = 46.1 bits (23), Expect = 0.074
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 520 cacgaaccgctccggcatgaactcctccggc 550
|||||||||||||||| |||||||||||||
Sbjct: 4683340 cacgaaccgctccggccggaactcctccggc 4683370
Score = 44.1 bits (22), Expect = 0.29
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 673 cgccggcgggtgcaggcgcagcgtctccttgatg 706
||||||||||| ||| ||||||||||||| ||||
Sbjct: 14140096 cgccggcgggtacagccgcagcgtctcctggatg 14140129
>emb|AL607097.1|OSJN01006 Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0082A03,
*** SEQUENCING IN PROGRESS ***
Length = 155150
Score = 61.9 bits (31), Expect = 1e-006
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 1654 gatgaggtggaggtggccgatgatgggcagc 1684
|||||||||||||||||||||||||||||||
Sbjct: 118692 gatgaggtggaggtggccgatgatgggcagc 118662
>gb|AF488521.1| Oryza sativa Cyt-P450 monooxygenase (PM-I) mRNA, complete cds
Length = 1666
Score = 61.9 bits (31), Expect = 1e-006
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 518 tgcacgaaccgctccggcatgaactcctccggcttctcccacg 560
|||| ||||| |||||||||||||||||||||| |||||||||
Sbjct: 1292 tgcaggaacctctccggcatgaactcctccggcctctcccacg 1250
>dbj|AK099468.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023N04, full
insert sequence
Length = 1933
Score = 61.9 bits (31), Expect = 1e-006
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 1654 gatgaggtggaggtggccgatgatgggcagc 1684
|||||||||||||||||||||||||||||||
Sbjct: 208 gatgaggtggaggtggccgatgatgggcagc 178
>dbj|AK105993.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-H03, full
insert sequence
Length = 1728
Score = 61.9 bits (31), Expect = 1e-006
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 1654 gatgaggtggaggtggccgatgatgggcagc 1684
|||||||||||||||||||||||||||||||
Sbjct: 208 gatgaggtggaggtggccgatgatgggcagc 178
>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0681G01, complete sequence
Length = 184118
Score = 61.9 bits (31), Expect = 1e-006
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1654 gatgaggtggaggtggccgatgatgggcagc 1684
|||||||||||||||||||||||||||||||
Sbjct: 58077 gatgaggtggaggtggccgatgatgggcagc 58107
>dbj|AP005245.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OSJNBa0025J22
Length = 175355
Score = 61.9 bits (31), Expect = 1e-006
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 518 tgcacgaaccgctccggcatgaactcctccggcttctcccacg 560
|||| ||||| |||||||||||||||||||||| |||||||||
Sbjct: 158905 tgcaggaacctctccggcatgaactcctccggcctctcccacg 158947
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggcttctcccacg 560
||||| ||| |||||||||||||| ||| |||||||||
Sbjct: 154214 gaacctctctggcatgaactcctcgggcctctcccacg 154177
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 655 gtgcgggaggaggaacggcgccggcgggtgcaggcgca 692
|||||| | ||||| |||||||| ||||||||||||||
Sbjct: 154079 gtgcggcacgaggatcggcgccgccgggtgcaggcgca 154042
>dbj|AP005254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OSJNBb0064I19
Length = 111644
Score = 61.9 bits (31), Expect = 1e-006
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 518 tgcacgaaccgctccggcatgaactcctccggcttctcccacg 560
|||| ||||| |||||||||||||||||||||| |||||||||
Sbjct: 6964 tgcaggaacctctccggcatgaactcctccggcctctcccacg 7006
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 533 ggcatgaactcctccggcttctcccacgtcgtccggtc 570
||||||||||| |||||| ||||||||| |||| ||||
Sbjct: 53344 ggcatgaactcgtccggcctctcccacgccgtcgggtc 53307
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggcttctcccacg 560
||||| ||| |||||||||||||| ||| |||||||||
Sbjct: 30721 gaacctctctggcatgaactcctcgggcctctcccacg 30684
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 655 gtgcgggaggaggaacggcgccggcgggtgcaggcgca 692
|||||| | ||||| |||||||| ||||||||||||||
Sbjct: 30586 gtgcggcacgaggatcggcgccgccgggtgcaggcgca 30549
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 523 gaaccgctccggcatgaactcctccggcttctcccacg 560
||||| ||| |||||||||||||| ||| |||||||||
Sbjct: 2273 gaacctctctggcatgaactcctcgggcctctcccacg 2236
Score = 44.1 bits (22), Expect = 0.29
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 655 gtgcgggaggaggaacggcgccggcgggtgcaggcgca 692
|||||| | ||||| |||||||| ||||||||||||||
Sbjct: 2138 gtgcggcacgaggatcggcgccgccgggtgcaggcgca 2101
>gb|AACV01000500.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000500, whole
genome shotgun sequence
Length = 4389
Score = 61.9 bits (31), Expect = 1e-006
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 1418 cgccagtactcgccgtagggcacgaacgcgacgtc 1452
||||||||||||||||||||| |||||||||||||
Sbjct: 912 cgccagtactcgccgtagggcgcgaacgcgacgtc 878
>gb|AACV01012852.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg012852, whole
genome shotgun sequence
Length = 4540
Score = 61.9 bits (31), Expect = 1e-006
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 1654 gatgaggtggaggtggccgatgatgggcagc 1684
|||||||||||||||||||||||||||||||
Sbjct: 4471 gatgaggtggaggtggccgatgatgggcagc 4441
>gb|AACV01018823.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018823, whole
genome shotgun sequence
Length = 28999
Score = 61.9 bits (31), Expect = 1e-006
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 518 tgcacgaaccgctccggcatgaactcctccggcttctcccacg 560
|||| ||||| |||||||||||||||||||||| |||||||||
Sbjct: 25512 tgcaggaacctctccggcatgaactcctccggcctctcccacg 25470
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0075G19
Length = 163558
Score = 61.9 bits (31), Expect = 1e-006
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 1654 gatgaggtggaggtggccgatgatgggcagc 1684
|||||||||||||||||||||||||||||||
Sbjct: 27361 gatgaggtggaggtggccgatgatgggcagc 27331
>ref|XM_483259.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1518
Score = 61.9 bits (31), Expect = 1e-006
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 518 tgcacgaaccgctccggcatgaactcctccggcttctcccacg 560
|||| ||||| |||||||||||||||||||||| |||||||||
Sbjct: 1262 tgcaggaacctctccggcatgaactcctccggcctctcccacg 1220
>ref|NM_188579.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1590
Score = 61.9 bits (31), Expect = 1e-006
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 1418 cgccagtactcgccgtagggcacgaacgcgacgtc 1452
||||||||||||||||||||| |||||||||||||
Sbjct: 413 cgccagtactcgccgtagggcgcgaacgcgacgtc 379
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,359,726
Number of Sequences: 438736
Number of extensions: 3359726
Number of successful extensions: 32981
Number of sequences better than 0.5: 280
Number of HSP's better than 0.5 without gapping: 323
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 25931
Number of HSP's gapped (non-prelim): 7044
length of query: 1999
length of database: 2,800,419,916
effective HSP length: 22
effective length of query: 1977
effective length of database: 2,790,767,724
effective search space: 5517347790348
effective search space used: 5517347790348
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)