BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716236.2.2
(868 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF319735.1|CF319735 HD--10-F14.g1 OsHDAC1-overexpressing... 607 e-171
gb|CF320410.1|CF320410 HD--11-E18.g1 OsHDAC1-overexpressing... 607 e-171
gb|CF316385.1|CF316385 HD--05-K12.g1 OsHDAC1-overexpressing... 597 e-168
ref|NM_191107.1| Oryza sativa (japonica cultivar-group), p... 593 e-167
gb|CF281091.1|CF281091 14ETL--08-A04.g1 Rice etiolated leaf... 583 e-164
ref|NM_191104.1| Oryza sativa (japonica cultivar-group), p... 579 e-163
gb|CF331283.1|CF331283 NACL--07-F14.g1 Rice callus plasmid ... 555 e-155
gb|AU197755.1|AU197755 AU197755 Rice mature leaf Oryza sati... 535 e-149
gb|CF316384.1|CF316384 HD--05-K12.b1 OsHDAC1-overexpressing... 535 e-149
gb|CF320409.1|CF320409 HD--11-E18.b1 OsHDAC1-overexpressing... 424 e-116
gb|AU029866.1|AU029866 AU029866 Rice cDNA from immature lea... 400 e-109
gb|CF331282.1|CF331282 NACL--07-F14.b1 Rice callus plasmid ... 391 e-106
gb|AU070799.1|AU070799 AU070799 Rice cDNA from young root O... 327 6e-087
gb|AU162581.1|AU162581 AU162581 Rice cDNA from young root O... 325 2e-086
gb|C19370.1|C19370 C19370 Rice panicle at ripening stage Or... 319 1e-084
gb|AU057153.1|AU057153 AU057153 Oryza sativa mature leaf Ni... 311 3e-082
gb|AU094999.1|AU094999 AU094999 Rice immature leaf includin... 278 5e-072
gb|AU162214.1|AU162214 AU162214 Rice panicle at ripening st... 250 1e-063
gb|AU223080.1|AU223080 AU223080 Rice shoot Oryza sativa (ja... 208 4e-051
gb|D41217.1|D41217 RICS3563A Rice shoot Oryza sativa (japon... 200 9e-049
dbj|AB074411.1| Oryza sativa (japonica cultivar-group) mRNA... 198 4e-048
dbj|AK063826.1| Oryza sativa (japonica cultivar-group) cDNA... 198 4e-048
dbj|AK099284.1| Oryza sativa (japonica cultivar-group) cDNA... 198 4e-048
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 194 6e-047
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 194 6e-047
dbj|AP003446.3| Oryza sativa (japonica cultivar-group) geno... 194 6e-047
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 194 6e-047
gb|C97006.1|C97006 C97006 Rice callus Oryza sativa (japonic... 192 2e-046
gb|CV720784.1|CV720784 YBH--01-N10.b1 Rice before heading y... 192 2e-046
gb|CV728679.1|CV728679 FLO--01-C08.b1 Rice flower lambda ph... 192 2e-046
gb|AACV01002584.1| Oryza sativa (japonica cultivar-group) c... 190 9e-046
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 190 9e-046
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 190 9e-046
dbj|AK058360.1| Oryza sativa (japonica cultivar-group) cDNA... 188 3e-045
gb|CF299363.1|CF299363 7LEAF--03-F17.b1 Rice leaf plasmid c... 184 5e-044
gb|AACV01002583.1| Oryza sativa (japonica cultivar-group) c... 182 2e-043
gb|CB000215.1|CB000215 S345T_B07 Rice cold stress germinati... 178 3e-042
gb|CV732417.1|CV732417 FLO--06-O05.b1 Rice flower lambda ph... 178 3e-042
gb|AACV01026951.1| Oryza sativa (japonica cultivar-group) C... 174 5e-041
ref|NM_192451.1| Oryza sativa (japonica cultivar-group), p... 165 5e-038
gb|CF316408.1|CF316408 HD--05-L01.b1 OsHDAC1-overexpressing... 163 2e-037
gb|CF317764.1|CF317764 HD--07-J05.g1 OsHDAC1-overexpressing... 157 1e-035
gb|CF325772.1|CF325772 JMT1--04-C17.g1 AtJMT-overexpressing... 157 1e-035
gb|CV725705.1|CV725705 14Salt--02-O18.g1 Salt treated rice ... 157 1e-035
gb|CF321884.1|CF321884 HD--13-E16.b1 OsHDAC1-overexpressing... 155 5e-035
dbj|AK100516.1| Oryza sativa (japonica cultivar-group) cDNA... 139 3e-030
gb|C26939.1|C26939 C26939 Rice callus cDNA Oryza sativa (ja... 129 3e-027
gb|CB642753.1|CB642753 OSJNEb03B17.f OSJNEb Oryza sativa (j... 129 3e-027
gb|CB642754.1|CB642754 OSJNEb03B17.r OSJNEb Oryza sativa (j... 129 3e-027
gb|CF294377.1|CF294377 30DGS--03-O03.b1 Rice leaf plasmid c... 129 3e-027
ref|XM_463908.1| Oryza sativa (japonica cultivar-group), mRNA 129 3e-027
gb|CA999927.1|CA999927 S234L_B12 Rice cold stress germinati... 127 1e-026
gb|CB000585.1|CB000585 S345Q_C08 Rice cold stress germinati... 127 1e-026
gb|CF278481.1|CF278481 14ETL--04-G13.b1 Rice etiolated leaf... 127 1e-026
gb|CF308569.1|CF308569 ABF--02-H03.g1 ABF3-overexpressing t... 127 1e-026
gb|CF308881.1|CF308881 ABF--02-N21.g1 ABF3-overexpressing t... 127 1e-026
gb|CF313355.1|CF313355 HD--01-H09.b1 OsHDAC1-overexpressing... 127 1e-026
gb|CF314492.1|CF314492 HD--03-A16.b1 OsHDAC1-overexpressing... 127 1e-026
gb|CF333378.1|CF333378 JMT--02-E01.g1 AtJMT-overexpressing ... 127 1e-026
gb|CV731032.1|CV731032 FLO--04-O01.b1 Rice flower lambda ph... 127 1e-026
dbj|AB074412.1| Oryza sativa (japonica cultivar-group) mRNA... 127 1e-026
dbj|AK121248.1| Oryza sativa (japonica cultivar-group) cDNA... 127 1e-026
ref|XM_464900.1| Oryza sativa (japonica cultivar-group), mRNA 127 1e-026
gb|CF298849.1|CF298849 7LEAF--02-I03.b1 Rice leaf plasmid c... 125 4e-026
gb|CF314034.1|CF314034 HD--02-G13.g1 OsHDAC1-overexpressing... 125 4e-026
gb|CF322230.1|CF322230 HD--13-M04.b1 OsHDAC1-overexpressing... 125 4e-026
gb|CV720809.1|CV720809 YBH--01-O19.b1 Rice before heading y... 125 4e-026
gb|C97007.1|C97007 C97007 Rice callus Oryza sativa (japonic... 121 7e-025
dbj|AK120237.1| Oryza sativa (japonica cultivar-group) cDNA... 121 7e-025
gb|AU165280.1|AU165280 AU165280 Rice callus Oryza sativa (j... 119 3e-024
gb|CA754667.1|CA754667 BR030005001_BR030_E11_85_083.ab1 OA ... 119 3e-024
gb|CA999967.1|CA999967 S234L_D06 Rice cold stress germinati... 119 3e-024
gb|CF276570.1|CF276570 14ETL--01-M07.g1 Rice etiolated leaf... 119 3e-024
gb|CF281267.1|CF281267 14ETL--08-E02.b1 Rice etiolated leaf... 119 3e-024
gb|CF293966.1|CF293966 30DGS--03-F07.g1 Rice leaf plasmid c... 119 3e-024
gb|CF299364.1|CF299364 7LEAF--03-F17.g1 Rice leaf plasmid c... 119 3e-024
gb|CV728632.1|CV728632 FLO--01-B04.g1 Rice flower lambda ph... 119 3e-024
gb|CV728680.1|CV728680 FLO--01-C08.g1 Rice flower lambda ph... 119 3e-024
gb|CV732418.1|CV732418 FLO--06-O05.g1 Rice flower lambda ph... 119 3e-024
gb|C97020.1|C97020 C97020 Rice callus Oryza sativa (japonic... 115 4e-023
gb|C97188.1|C97188 C97188 Rice callus Oryza sativa (japonic... 115 4e-023
gb|C28078.1|C28078 C28078 Rice callus cDNA Oryza sativa (ja... 113 2e-022
gb|C97278.1|C97278 C97278 Rice callus Oryza sativa (japonic... 111 6e-022
gb|AU172930.1|AU172930 AU172930 Rice panicle (between 3cm t... 111 6e-022
gb|AU181565.1|AU181565 AU181565 Rice callus (2001) Oryza sa... 111 6e-022
gb|AU182928.1|AU182928 AU182928 Rice panicle (between 3cm t... 111 6e-022
gb|CB642475.1|CB642475 OSJNEb02K20.f OSJNEb Oryza sativa (j... 111 6e-022
gb|CB651568.1|CB651568 OSJNEb16J07.f OSJNEb Oryza sativa (j... 111 6e-022
gb|CB658251.1|CB658251 OSJNEc14C14.f OSJNEc Oryza sativa (j... 111 6e-022
gb|CB661380.1|CB661380 OSJNEd04C07.f OSJNEd Oryza sativa (j... 111 6e-022
gb|CB661533.1|CB661533 OSJNEd04I21.f OSJNEd Oryza sativa (j... 111 6e-022
gb|CB661534.1|CB661534 OSJNEd04I21.r OSJNEd Oryza sativa (j... 111 6e-022
gb|CB676957.1|CB676957 OSJNEe13I05.f OSJNEe Oryza sativa (j... 111 6e-022
gb|CB676958.1|CB676958 OSJNEe13I05.r OSJNEe Oryza sativa (j... 111 6e-022
gb|CB676999.1|CB676999 OSJNEe13J05.f OSJNEe Oryza sativa (j... 111 6e-022
gb|CB677000.1|CB677000 OSJNEe13J05.r OSJNEe Oryza sativa (j... 111 6e-022
gb|CF276156.1|CF276156 14ETL--01-D05.g1 Rice etiolated leaf... 111 6e-022
gb|CF277702.1|CF277702 14ETL--03-F11.g1 Rice etiolated leaf... 111 6e-022
gb|CF277726.1|CF277726 14ETL--03-F24.b1 Rice etiolated leaf... 111 6e-022
gb|CF277753.1|CF277753 14ETL--03-G14.b1 Rice etiolated leaf... 111 6e-022
gb|CF277768.1|CF277768 14ETL--03-G22.b1 Rice etiolated leaf... 111 6e-022
gb|CF278692.1|CF278692 14ETL--04-L03.g1 Rice etiolated leaf... 111 6e-022
gb|CF279056.1|CF279056 14ETL--05-D14.b1 Rice etiolated leaf... 111 6e-022
gb|CF279381.1|CF279381 14ETL--05-K15.b1 Rice etiolated leaf... 111 6e-022
gb|CF279425.1|CF279425 14ETL--05-L14.b1 Rice etiolated leaf... 111 6e-022
gb|CF281559.1|CF281559 14ETL--08-K15.b1 Rice etiolated leaf... 111 6e-022
gb|CF281697.1|CF281697 14ETL--08-N17.b1 Rice etiolated leaf... 111 6e-022
gb|CF281700.1|CF281700 14ETL--08-N18.g1 Rice etiolated leaf... 111 6e-022
gb|CF282055.1|CF282055 14ETL--09-G05.g1 Rice etiolated leaf... 111 6e-022
gb|CF282117.1|CF282117 14ETL--09-H18.g1 Rice etiolated leaf... 111 6e-022
gb|CF282167.1|CF282167 14ETL--09-I23.g1 Rice etiolated leaf... 111 6e-022
gb|CF282184.1|CF282184 14ETL--09-J09.g1 Rice etiolated leaf... 111 6e-022
gb|CF291053.1|CF291053 14ROOT--01-F07.g1 Rice root plasmid ... 111 6e-022
gb|CF291201.1|CF291201 14ROOT--01-I15.g1 Rice root plasmid ... 111 6e-022
gb|CF292603.1|CF292603 30DGS--01-H21.g1 Rice leaf plasmid c... 111 6e-022
gb|CF293671.1|CF293671 30DGS--02-P01.b1 Rice leaf plasmid c... 111 6e-022
gb|CF293945.1|CF293945 30DGS--03-E21.b1 Rice leaf plasmid c... 111 6e-022
gb|CF294433.1|CF294433 30DGS--03-P07.g1 Rice leaf plasmid c... 111 6e-022
gb|CF295837.1|CF295837 30DGS--05-P05.b1 Rice leaf plasmid c... 111 6e-022
gb|CF313405.1|CF313405 HD--01-I10.g1 OsHDAC1-overexpressing... 111 6e-022
gb|CF314493.1|CF314493 HD--03-A16.g1 OsHDAC1-overexpressing... 111 6e-022
gb|CF323775.1|CF323775 HDN--04-L21.g1 OsHDAC1-overexpressin... 111 6e-022
gb|CF324719.1|CF324719 JMT1--01-E17.g1 AtJMT-overexpressing... 111 6e-022
gb|CF331205.1|CF331205 NACL--07-D19.g1 Rice callus plasmid ... 111 6e-022
gb|CF333893.1|CF333893 JMT--02-P15.g1 AtJMT-overexpressing ... 111 6e-022
gb|CF338142.1|CF338142 JMT--08-O03.b1 AtJMT-overexpressing ... 111 6e-022
gb|CF338922.1|CF338922 RCL1--03-D17.g1 Regenerated callus l... 111 6e-022
gb|CF339916.1|CF339916 RCL1--06-F17.g1 Regenerated callus l... 111 6e-022
gb|CF340081.1|CF340081 RCL1--06-O06.g1 Regenerated callus l... 111 6e-022
gb|CF340704.1|CF340704 RCL1--08-N22.g1 Regenerated callus l... 111 6e-022
gb|CD670662.1|CD670662 OsMR077 5MT resistant rice mutant cD... 111 6e-022
gb|CV721983.1|CV721983 YBH--05-P21.b1 Rice before heading y... 111 6e-022
gb|CV722290.1|CV722290 YDARK--01-C04.b1 Etiolated rice leaf... 111 6e-022
gb|CV723825.1|CV723825 root--04-O09.g1 Rice root lambda pha... 111 6e-022
gb|CV733392.1|CV733392 FLO--08-E15.g1 Rice flower lambda ph... 111 6e-022
gb|BP184483.1|BP184483 BP184483 pNS rice panicle cDNA, flow... 111 6e-022
dbj|AK119682.1| Oryza sativa (japonica cultivar-group) cDNA... 111 6e-022
ref|XM_474269.1| Oryza sativa (japonica cultivar-group), p... 111 6e-022
gb|CF279871.1|CF279871 14ETL--06-F08.g1 Rice etiolated leaf... 109 3e-021
gb|C29069.1|C29069 C29069 Rice callus cDNA Oryza sativa (ja... 107 1e-020
gb|AU092820.1|AU092820 AU092820 Rice callus Oryza sativa (j... 107 1e-020
gb|CF295096.1|CF295096 30DGS--04-N24.b1 Rice leaf plasmid c... 107 1e-020
gb|D41645.1|D41645 RICS4285A Rice shoot Oryza sativa (japon... 105 4e-020
gb|CF316409.1|CF316409 HD--05-L01.g1 OsHDAC1-overexpressing... 105 4e-020
gb|CF277977.1|CF277977 14ETL--03-L09.g1 Rice etiolated leaf... 103 2e-019
gb|CF278105.1|CF278105 14ETL--03-O02.b1 Rice etiolated leaf... 103 2e-019
gb|CF278110.1|CF278110 14ETL--03-O04.g1 Rice etiolated leaf... 103 2e-019
gb|CF279180.1|CF279180 14ETL--05-G05.g1 Rice etiolated leaf... 103 2e-019
gb|CF280346.1|CF280346 14ETL--06-P17.b1 Rice etiolated leaf... 103 2e-019
gb|CF281125.1|CF281125 14ETL--08-B02.b1 Rice etiolated leaf... 103 2e-019
gb|CF281685.1|CF281685 14ETL--08-N11.b1 Rice etiolated leaf... 103 2e-019
gb|CF281788.1|CF281788 14ETL--08-P20.b1 Rice etiolated leaf... 103 2e-019
gb|CF282212.1|CF282212 14ETL--09-J23.g1 Rice etiolated leaf... 103 2e-019
gb|CF282339.1|CF282339 14ETL--09-M23.g1 Rice etiolated leaf... 103 2e-019
gb|CF282343.1|CF282343 14ETL--09-N01.g1 Rice etiolated leaf... 103 2e-019
gb|CF294195.1|CF294195 30DGS--03-K06.b1 Rice leaf plasmid c... 103 2e-019
gb|CF295014.1|CF295014 30DGS--04-M06.b1 Rice leaf plasmid c... 103 2e-019
gb|CF317220.1|CF317220 HD--06-N09.b1 OsHDAC1-overexpressing... 103 2e-019
dbj|AK059627.1| Oryza sativa (japonica cultivar-group) cDNA... 103 2e-019
dbj|AK065902.1| Oryza sativa (japonica cultivar-group) cDNA... 103 2e-019
gb|D41420.1|D41420 RICS3913A Rice shoot Oryza sativa (japon... 101 6e-019
gb|C20360.1|C20360 C20360 Rice panicle at ripening stage Or... 101 6e-019
gb|C27731.1|C27731 C27731 Rice callus cDNA Oryza sativa (ja... 101 6e-019
gb|C28054.1|C28054 C28054 Rice callus cDNA Oryza sativa (ja... 101 6e-019
gb|D16005.1|D16005 RICC2008A Rice callus Oryza sativa (japo... 101 6e-019
gb|AU056299.1|AU056299 AU056299 Oryza sativa mature leaf Ni... 101 6e-019
gb|AU064107.1|AU064107 AU064107 Rice panicle at flowering s... 101 6e-019
gb|AU064724.1|AU064724 AU064724 Rice panicle (between 3cm t... 101 6e-019
gb|CF276030.1|CF276030 14ETL--01-A10.b1 Rice etiolated leaf... 101 6e-019
gb|CF277829.1|CF277829 14ETL--03-I05.g1 Rice etiolated leaf... 101 6e-019
gb|CF278017.1|CF278017 14ETL--03-M05.g1 Rice etiolated leaf... 101 6e-019
gb|CF278303.1|CF278303 14ETL--04-C17.g1 Rice etiolated leaf... 101 6e-019
gb|CF279415.1|CF279415 14ETL--05-L09.b1 Rice etiolated leaf... 101 6e-019
gb|CF279478.1|CF279478 14ETL--05-M17.b1 Rice etiolated leaf... 101 6e-019
gb|CF279636.1|CF279636 14ETL--06-A05.g1 Rice etiolated leaf... 101 6e-019
gb|CF279684.1|CF279684 14ETL--06-B05.g1 Rice etiolated leaf... 101 6e-019
gb|CF281769.1|CF281769 14ETL--08-P10.b1 Rice etiolated leaf... 101 6e-019
gb|CF281934.1|CF281934 14ETL--09-D10.b1 Rice etiolated leaf... 101 6e-019
gb|CF282332.1|CF282332 14ETL--09-M20.b1 Rice etiolated leaf... 101 6e-019
gb|CF293965.1|CF293965 30DGS--03-F07.b1 Rice leaf plasmid c... 100 2e-018
gb|CF294083.1|CF294083 30DGS--03-H20.g1 Rice leaf plasmid c... 100 2e-018
gb|CF308568.1|CF308568 ABF--02-H03.b1 ABF3-overexpressing t... 100 2e-018
gb|AU030021.1|AU030021 AU030021 Rice cDNA from immature lea... 98 1e-017
gb|CF278016.1|CF278016 14ETL--03-M05.b1 Rice etiolated leaf... 98 1e-017
gb|CF296050.1|CF296050 30DGS--06-E01.b1 Rice leaf plasmid c... 98 1e-017
gb|CF328241.1|CF328241 NACL--03-A20.g1 Rice callus plasmid ... 98 1e-017
gb|D41291.1|D41291 RICS3677A Rice shoot Oryza sativa (japon... 96 4e-017
gb|D41292.1|D41292 RICS3678A Rice shoot Oryza sativa (japon... 96 4e-017
gb|C27180.1|C27180 C27180 Rice callus cDNA Oryza sativa (ja... 96 4e-017
gb|C29026.1|C29026 C29026 Rice callus cDNA Oryza sativa (ja... 96 4e-017
gb|CF316887.1|CF316887 HD--06-F24.b1 OsHDAC1-overexpressing... 96 4e-017
gb|CF278474.1|CF278474 14ETL--04-G09.g1 Rice etiolated leaf... 94 2e-016
gb|C27340.1|C27340 C27340 Rice callus cDNA Oryza sativa (ja... 92 6e-016
gb|D15998.1|D15998 RICC1960A Rice callus Oryza sativa (japo... 90 2e-015
gb|AU032066.1|AU032066 AU032066 Rice root Oryza sativa (jap... 90 2e-015
gb|CF294706.1|CF294706 30DGS--04-F12.g1 Rice leaf plasmid c... 90 2e-015
gb|CF279559.1|CF279559 14ETL--05-O10.g1 Rice etiolated leaf... 88 9e-015
gb|C97191.1|C97191 C97191 Rice callus Oryza sativa (japonic... 86 4e-014
gb|C98697.1|C98697 C98697 Rice panicle at flowering stage O... 86 4e-014
gb|C19517.2|C19517 C19517 Rice panicle at ripening stage Or... 86 4e-014
gb|AACV01002031.1| Oryza sativa (japonica cultivar-group) c... 86 4e-014
dbj|AP003294.2| Oryza sativa (japonica cultivar-group) geno... 86 4e-014
dbj|AP003291.3| Oryza sativa (japonica cultivar-group) geno... 86 4e-014
gb|AU030023.1|AU030023 AU030023 Rice cDNA from immature lea... 84 1e-013
gb|CF279617.1|CF279617 14ETL--05-P19.b1 Rice etiolated leaf... 84 1e-013
gb|CF280624.1|CF280624 14ETL--07-F23.g1 Rice etiolated leaf... 84 1e-013
gb|CF281471.1|CF281471 14ETL--08-I15.b1 Rice etiolated leaf... 84 1e-013
gb|CF295838.1|CF295838 30DGS--05-P05.g1 Rice leaf plasmid c... 84 1e-013
dbj|AP003958.1| Oryza sativa (japonica cultivar-group) chro... 84 1e-013
dbj|AK066232.1| Oryza sativa (japonica cultivar-group) cDNA... 84 1e-013
ref|NT_079878.2| Oryza sativa (japonica cultivar-group) 84 1e-013
dbj|AP004743.2| Oryza sativa (japonica cultivar-group) geno... 84 1e-013
dbj|AP003618.3| Oryza sativa (japonica cultivar-group) geno... 84 1e-013
gb|AACV01014101.1| Oryza sativa (japonica cultivar-group) c... 84 1e-013
gb|CH401214.1| Oryza sativa (japonica cultivar-group) chrom... 84 1e-013
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 84 1e-013
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 84 1e-013
gb|C29065.1|C29065 C29065 Rice callus cDNA Oryza sativa (ja... 82 6e-013
gb|AU062974.2|AU062974 AU062974 Rice callus Oryza sativa (j... 82 6e-013
gb|AU063027.2|AU063027 AU063027 Rice callus Oryza sativa (j... 82 6e-013
gb|CF277587.1|CF277587 14ETL--03-D02.b1 Rice etiolated leaf... 82 6e-013
gb|CF277774.1|CF277774 14ETL--03-H01.b1 Rice etiolated leaf... 82 6e-013
gb|CF277828.1|CF277828 14ETL--03-I05.b1 Rice etiolated leaf... 82 6e-013
gb|CF278019.1|CF278019 14ETL--03-M07.b1 Rice etiolated leaf... 82 6e-013
gb|AU223120.1|AU223120 AU223120 Rice shoot Oryza sativa (ja... 80 2e-012
gb|CF282144.1|CF282144 14ETL--09-I10.b1 Rice etiolated leaf... 80 2e-012
gb|CF292602.1|CF292602 30DGS--01-H21.b1 Rice leaf plasmid c... 80 2e-012
gb|CF295097.1|CF295097 30DGS--04-N24.g1 Rice leaf plasmid c... 80 2e-012
gb|AU056300.1|AU056300 AU056300 Oryza sativa mature leaf Ni... 78 9e-012
gb|AU093156.1|AU093156 AU093156 Rice callus Oryza sativa (j... 78 9e-012
dbj|AP006156.2| Oryza sativa (japonica cultivar-group) geno... 78 9e-012
gb|AACV01019437.1| Oryza sativa (japonica cultivar-group) c... 78 9e-012
ref|NT_107079.1| Oryza sativa (japonica cultivar-group) 78 9e-012
gb|CH401241.1| Oryza sativa (japonica cultivar-group) chrom... 78 9e-012
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 78 9e-012
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 78 9e-012
gb|AU092702.1|AU092702 AU092702 Rice callus Oryza sativa (j... 76 4e-011
gb|CF278020.1|CF278020 14ETL--03-M07.g1 Rice etiolated leaf... 76 4e-011
gb|CF278032.1|CF278032 14ETL--03-M13.g1 Rice etiolated leaf... 76 4e-011
gb|CF281472.1|CF281472 14ETL--08-I15.g1 Rice etiolated leaf... 76 4e-011
gb|CF298850.1|CF298850 7LEAF--02-I03.g1 Rice leaf plasmid c... 76 4e-011
gb|CF278441.1|CF278441 14ETL--04-F16.g1 Rice etiolated leaf... 74 1e-010
gb|CF279618.1|CF279618 14ETL--05-P19.g1 Rice etiolated leaf... 74 1e-010
gb|AU065601.2|AU065601 AU065601 Rice cDNA from immature lea... 74 1e-010
gb|CF282054.1|CF282054 14ETL--09-G05.b1 Rice etiolated leaf... 72 6e-010
gb|CF296051.1|CF296051 30DGS--06-E01.g1 Rice leaf plasmid c... 72 6e-010
gb|AACV01003225.1| Oryza sativa (japonica cultivar-group) c... 70 2e-009
dbj|AP005851.2| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
dbj|AP004078.3| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 70 2e-009
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
dbj|AP005777.2| Oryza sativa (japonica cultivar-group) geno... 68 9e-009
gb|AACV01003800.1| Oryza sativa (japonica cultivar-group) c... 68 9e-009
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 68 9e-009
gb|C97279.1|C97279 C97279 Rice callus Oryza sativa (japonic... 66 3e-008
gb|CF316888.1|CF316888 HD--06-F24.g1 OsHDAC1-overexpressing... 66 3e-008
gb|CF278482.1|CF278482 14ETL--04-G13.g1 Rice etiolated leaf... 64 1e-007
gb|CF293672.1|CF293672 30DGS--02-P01.g1 Rice leaf plasmid c... 64 1e-007
gb|C27576.1|C27576 C27576 Rice callus cDNA Oryza sativa (ja... 62 5e-007
gb|CF277775.1|CF277775 14ETL--03-H01.g1 Rice etiolated leaf... 62 5e-007
dbj|AK060954.1| Oryza sativa (japonica cultivar-group) cDNA... 62 5e-007
dbj|AK104783.1| Oryza sativa (japonica cultivar-group) cDNA... 62 5e-007
gb|AACV01010638.1| Oryza sativa (japonica cultivar-group) c... 62 5e-007
ref|NT_107201.1| Oryza sativa (japonica cultivar-group) 62 5e-007
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 62 5e-007
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 62 5e-007
emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromoso... 62 5e-007
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 62 5e-007
gb|AU030020.1|AU030020 AU030020 Rice cDNA from immature lea... 60 2e-006
gb|AU056370.1|AU056370 AU056370 Oryza sativa mature leaf Ni... 60 2e-006
gb|AU071246.1|AU071246 AU071246 Rice cDNA from young root O... 60 2e-006
gb|CF278031.1|CF278031 14ETL--03-M13.b1 Rice etiolated leaf... 60 2e-006
gb|CF278440.1|CF278440 14ETL--04-F16.b1 Rice etiolated leaf... 60 2e-006
gb|CF279179.1|CF279179 14ETL--05-G05.b1 Rice etiolated leaf... 60 2e-006
gb|CF279259.1|CF279259 14ETL--05-H24.g1 Rice etiolated leaf... 60 2e-006
gb|CF279391.1|CF279391 14ETL--05-K20.g1 Rice etiolated leaf... 60 2e-006
gb|CF279558.1|CF279558 14ETL--05-O10.b1 Rice etiolated leaf... 60 2e-006
gb|CF294705.1|CF294705 30DGS--04-F12.b1 Rice leaf plasmid c... 60 2e-006
gb|CF295015.1|CF295015 30DGS--04-M06.g1 Rice leaf plasmid c... 60 2e-006
gb|CF308880.1|CF308880 ABF--02-N21.b1 ABF3-overexpressing t... 60 2e-006
gb|CF322231.1|CF322231 HD--13-M04.g1 OsHDAC1-overexpressing... 60 2e-006
gb|CF324425.1|CF324425 HDN--06-I01.g1 OsHDAC1-overexpressin... 60 2e-006
gb|CF331070.1|CF331070 NACL--07-A19.g1 Rice callus plasmid ... 60 2e-006
gb|CF278473.1|CF278473 14ETL--04-G09.b1 Rice etiolated leaf... 58 8e-006
gb|C99257.1|C99257 C99257 Rice panicle at ripening stage Or... 56 3e-005
gb|AU058351.1|AU058351 AU058351 Oryza sativa Nipponbare imm... 56 3e-005
gb|AU092463.1|AU092463 AU092463 Rice callus Oryza sativa (j... 56 3e-005
gb|AU096176.1|AU096176 AU096176 Rice green shoot Oryza sati... 56 3e-005
gb|AU108792.1|AU108792 AU108792 Rice callus Oryza sativa (j... 56 3e-005
gb|AU108793.1|AU108793 AU108793 Rice callus Oryza sativa (j... 56 3e-005
gb|AU162469.1|AU162469 AU162469 Rice root Oryza sativa (jap... 56 3e-005
gb|AU164045.1|AU164045 AU164045 Rice panicle at ripening st... 56 3e-005
gb|AU181691.1|AU181691 AU181691 Rice callus (2001) Oryza sa... 56 3e-005
gb|AU182169.1|AU182169 AU182169 Rice callus (2001) Oryza sa... 56 3e-005
gb|CB642476.1|CB642476 OSJNEb02K20.r OSJNEb Oryza sativa (j... 56 3e-005
gb|CB651569.1|CB651569 OSJNEb16J07.r OSJNEb Oryza sativa (j... 56 3e-005
gb|CB661381.1|CB661381 OSJNEd04C07.r OSJNEd Oryza sativa (j... 56 3e-005
gb|CF276155.1|CF276155 14ETL--01-D05.b1 Rice etiolated leaf... 56 3e-005
gb|CF276569.1|CF276569 14ETL--01-M07.b1 Rice etiolated leaf... 56 3e-005
gb|CF277769.1|CF277769 14ETL--03-G22.g1 Rice etiolated leaf... 56 3e-005
gb|CF277976.1|CF277976 14ETL--03-L09.b1 Rice etiolated leaf... 56 3e-005
gb|CF278106.1|CF278106 14ETL--03-O02.g1 Rice etiolated leaf... 56 3e-005
gb|CF278109.1|CF278109 14ETL--03-O04.b1 Rice etiolated leaf... 56 3e-005
gb|CF279124.1|CF279124 14ETL--05-F01.g1 Rice etiolated leaf... 56 3e-005
gb|CF279258.1|CF279258 14ETL--05-H24.b1 Rice etiolated leaf... 56 3e-005
gb|CF279479.1|CF279479 14ETL--05-M17.g1 Rice etiolated leaf... 56 3e-005
gb|CF279870.1|CF279870 14ETL--06-F08.b1 Rice etiolated leaf... 56 3e-005
gb|CF281126.1|CF281126 14ETL--08-B02.g1 Rice etiolated leaf... 56 3e-005
gb|CF281686.1|CF281686 14ETL--08-N11.g1 Rice etiolated leaf... 56 3e-005
gb|CF281770.1|CF281770 14ETL--08-P10.g1 Rice etiolated leaf... 56 3e-005
gb|CF282166.1|CF282166 14ETL--09-I23.b1 Rice etiolated leaf... 56 3e-005
gb|CF282183.1|CF282183 14ETL--09-J09.b1 Rice etiolated leaf... 56 3e-005
gb|CF282211.1|CF282211 14ETL--09-J23.b1 Rice etiolated leaf... 56 3e-005
gb|CF282338.1|CF282338 14ETL--09-M23.b1 Rice etiolated leaf... 56 3e-005
gb|CF282342.1|CF282342 14ETL--09-N01.b1 Rice etiolated leaf... 56 3e-005
gb|CF291200.1|CF291200 14ROOT--01-I15.b1 Rice root plasmid ... 56 3e-005
gb|CF294082.1|CF294082 30DGS--03-H20.b1 Rice leaf plasmid c... 56 3e-005
gb|CF294196.1|CF294196 30DGS--03-K06.g1 Rice leaf plasmid c... 56 3e-005
gb|CF294432.1|CF294432 30DGS--03-P07.b1 Rice leaf plasmid c... 56 3e-005
gb|CF295752.1|CF295752 30DGS--05-N07.b1 Rice leaf plasmid c... 56 3e-005
gb|CF329031.1|CF329031 NACL--04-D09.b1 Rice callus plasmid ... 56 3e-005
gb|CF333892.1|CF333892 JMT--02-P15.b1 AtJMT-overexpressing ... 56 3e-005
gb|CV721424.1|CV721424 YBH--04-B04.b1 Rice before heading y... 56 3e-005
gb|CV733391.1|CV733391 FLO--08-E15.b1 Rice flower lambda ph... 56 3e-005
gb|C96971.1|C96971 C96971 Rice callus Oryza sativa (japonic... 54 1e-004
gb|AU182929.1|AU182929 AU182929 Rice panicle (between 3cm t... 54 1e-004
gb|CF279635.1|CF279635 14ETL--06-A05.b1 Rice etiolated leaf... 52 5e-004
gb|CF337249.1|CF337249 JMT--07-J23.b1 AtJMT-overexpressing ... 52 5e-004
gb|D47181.1|D47181 RICS12352A Rice green shoot Oryza sativa... 50 0.002
gb|AU183784.1|AU183784 AU183784 Rice panicle (between 3cm t... 50 0.002
gb|CB658252.1|CB658252 OSJNEc14C14.r OSJNEc Oryza sativa (j... 48 0.008
gb|CF279416.1|CF279416 14ETL--05-L09.g1 Rice etiolated leaf... 48 0.008
gb|CF281560.1|CF281560 14ETL--08-K15.g1 Rice etiolated leaf... 48 0.008
gb|CF281699.1|CF281699 14ETL--08-N18.b1 Rice etiolated leaf... 48 0.008
gb|CF282116.1|CF282116 14ETL--09-H18.b1 Rice etiolated leaf... 48 0.008
gb|CF317797.1|CF317797 HD--07-J23.g1 OsHDAC1-overexpressing... 48 0.008
gb|CF327160.1|CF327160 NACL--01-I14.b1 Rice callus plasmid ... 48 0.008
gb|D22634.1|D22634 RICC0656A Rice callus Oryza sativa (japo... 46 0.032
gb|AU092701.1|AU092701 AU092701 Rice callus Oryza sativa (j... 46 0.032
gb|CF327841.1|CF327841 NACL--02-H21.b1 Rice callus plasmid ... 46 0.032
gb|CF277727.1|CF277727 14ETL--03-F24.g1 Rice etiolated leaf... 44 0.12
gb|AU058156.2|AU058156 AU058156 Oryza sativa Nipponbare imm... 44 0.12
gb|CF294378.1|CF294378 30DGS--03-O03.g1 Rice leaf plasmid c... 42 0.49
gb|CX728430.1|CX728430 OSJNEf06M17.r OSJNEf Oryza sativa (j... 42 0.49
>gb|CF319735.1|CF319735 HD--10-F14.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--10-F14, mRNA sequence
Length = 652
Score = 607 bits (306), Expect = e-171
Identities = 420/458 (91%)
Strand = Plus / Plus
Query: 102 aggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggacc 161
|||||| | |||||||||| || || |||||||||||| |||||||| |||| || || |
Sbjct: 91 aggggcatatcatggcatcgaagcggatcctcaaggaactaaaggacctgcagaaagatc 150
Query: 162 ctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaacca 221
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 151 ctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccattggcaggcgacca 210
Query: 222 tcatgggtcctcctgatagtccatatgctggaggtgttttcttggtgaacattcatttcc 281
| ||||||||||| |||||||| |||||||| || |||||||| ||||| ||||||||||
Sbjct: 211 ttatgggtcctccagatagtccctatgctggtggagttttcttagtgaatattcatttcc 270
Query: 282 cgccagactaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaa 341
| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 271 ccccggactaccccttcaagcctccaaaggtatcttttaagacaaaggtcttccatccaa 330
Query: 342 acatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtggagccctgctt 401
|||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 331 acatcaatagcaatggaagcatatgccttgacattcttaaggagcaatggagccctgctt 390
Query: 402 tgacaatctctaaggttttgctttctatctgctccctgcttactgatcccaacccagacg 461
||||||| |||||||| |||||||| |||||||| ||||| ||||| |||||||| ||||
Sbjct: 391 tgacaatttctaaggtgttgctttcgatctgctcgctgctcactgaccccaacccggacg 450
Query: 462 accctcttgtccctgagattgctcacatgtacaagacggatcggcctaagtacgaggcga 521
|||||||||||||||||||||| |||||||||||||||||||| || ||||| ||| |||
Sbjct: 451 accctcttgtccctgagattgcccacatgtacaagacggatcgtccaaagtatgagacga 510
Query: 522 cagcccgcagctggacccagaagtacgccatgggatga 559
||||||||||||||||||||||||| ||||||||||||
Sbjct: 511 cagcccgcagctggacccagaagtatgccatgggatga 548
>gb|CF320410.1|CF320410 HD--11-E18.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--11-E18, mRNA sequence
Length = 617
Score = 607 bits (306), Expect = e-171
Identities = 420/458 (91%)
Strand = Plus / Plus
Query: 102 aggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggacc 161
|||||| | |||||||||| || || |||||||||||| |||||||| |||| || || |
Sbjct: 95 aggggcatatcatggcatcgaagcggatcctcaaggaactaaaggacctgcagaaagatc 154
Query: 162 ctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaacca 221
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 155 ctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccattggcaggcgacca 214
Query: 222 tcatgggtcctcctgatagtccatatgctggaggtgttttcttggtgaacattcatttcc 281
| ||||||||||| |||||||| |||||||| || |||||||| ||||| ||||||||||
Sbjct: 215 ttatgggtcctccagatagtccctatgctggtggagttttcttagtgaatattcatttcc 274
Query: 282 cgccagactaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaa 341
| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 275 ccccggactaccccttcaagcctccaaaggtatcttttaagacaaaggtcttccatccaa 334
Query: 342 acatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtggagccctgctt 401
|||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 335 acatcaatagcaatggaagcatatgccttgacattcttaaggagcaatggagccctgctt 394
Query: 402 tgacaatctctaaggttttgctttctatctgctccctgcttactgatcccaacccagacg 461
||||||| |||||||| |||||||| |||||||| ||||| ||||| |||||||| ||||
Sbjct: 395 tgacaatttctaaggtgttgctttcgatctgctcgctgctcactgaccccaacccggacg 454
Query: 462 accctcttgtccctgagattgctcacatgtacaagacggatcggcctaagtacgaggcga 521
|||||||||||||||||||||| |||||||||||||||||||| || ||||| ||| |||
Sbjct: 455 accctcttgtccctgagattgcccacatgtacaagacggatcgtccaaagtatgagacga 514
Query: 522 cagcccgcagctggacccagaagtacgccatgggatga 559
||||||||||||||||||||||||| ||||||||||||
Sbjct: 515 cagcccgcagctggacccagaagtatgccatgggatga 552
>gb|CF316385.1|CF316385 HD--05-K12.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--05-K12, mRNA sequence
Length = 584
Score = 597 bits (301), Expect = e-168
Identities = 412/449 (91%)
Strand = Plus / Plus
Query: 111 tcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggaccctccaacat 170
|||||||||| || || |||||||||||| |||||||| |||| || || ||||||||||
Sbjct: 94 tcatggcatcgaagcggatcctcaaggaactaaaggacctgcagaaagatcctccaacat 153
Query: 171 catgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtc 230
||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||
Sbjct: 154 catgcagtgcaggtcctgctggtgaggatatgttccattggcaggcgaccattatgggtc 213
Query: 231 ctcctgatagtccatatgctggaggtgttttcttggtgaacattcatttcccgccagact 290
|||| |||||||| |||||||| || |||||||| ||||| ||||||||||| || ||||
Sbjct: 214 ctccagatagtccctatgctggtggagttttcttagtgaatattcatttccccccggact 273
Query: 291 accccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaaacatcaata 350
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 274 accccttcaagcctccaaaggtatcttttaagacaaaggtcttccatccaaacatcaata 333
Query: 351 gtaatggaagcatatgtcttgacattcttaaggagcagtggagccctgctttgacaatct 410
| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 334 gcaatggaagcatatgccttgacattcttaaggagcaatggagccctgctttgacaattt 393
Query: 411 ctaaggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttg 470
||||||| |||||||| |||||||| ||||| ||||| |||||||| |||||||||||||
Sbjct: 394 ctaaggtgttgctttcgatctgctcgctgctcactgaccccaacccggacgaccctcttg 453
Query: 471 tccctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagcccgca 530
||||||||||||| |||||||||||||||||||| || ||||| ||| ||||||||||||
Sbjct: 454 tccctgagattgcccacatgtacaagacggatcgtccaaagtatgagacgacagcccgca 513
Query: 531 gctggacccagaagtacgccatgggatga 559
|||||||||||||||| ||||| ||||||
Sbjct: 514 gctggacccagaagtatgccattggatga 542
>ref|NM_191107.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 447
Score = 593 bits (299), Expect = e-167
Identities = 410/447 (91%)
Strand = Plus / Plus
Query: 113 atggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggaccctccaacatca 172
|||||||| || || |||||||||||| |||||||| |||| || || ||||||||||||
Sbjct: 1 atggcatcgaagcggatcctcaaggaactaaaggacctgcagaaagatcctccaacatca 60
Query: 173 tgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcct 232
||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 61 tgcagtgcaggtcctgctggtgaggatatgttccattggcaggcgaccattatgggtcct 120
Query: 233 cctgatagtccatatgctggaggtgttttcttggtgaacattcatttcccgccagactac 292
|| |||||||| |||||||| || |||||||| ||||| ||||||||||| || ||||||
Sbjct: 121 ccagatagtccctatgctggtggagttttcttagtgaatattcatttccccccggactac 180
Query: 293 cccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaaacatcaatagt 352
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 181 cccttcaagcctccaaaggtatctttcaagacaaaggtcttccatccaaacatcaatagc 240
Query: 353 aatggaagcatatgtcttgacattcttaaggagcagtggagccctgctttgacaatctct 412
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 241 aatggaagcatatgccttgacattcttaaggagcaatggagccctgctttgacaatttct 300
Query: 413 aaggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgtc 472
||||| |||||||| |||||||| ||||| ||||| |||||||| |||||||||||||||
Sbjct: 301 aaggtgttgctttcgatctgctcgctgctcactgaccccaacccggacgaccctcttgtc 360
Query: 473 cctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagcccgcagc 532
||||||||||| |||||||||||||||||||| || ||||| ||| ||||||||||||||
Sbjct: 361 cctgagattgcccacatgtacaagacggatcgtccaaagtatgagacgacagcccgcagc 420
Query: 533 tggacccagaagtacgccatgggatga 559
|||||||||||||| ||||||||||||
Sbjct: 421 tggacccagaagtatgccatgggatga 447
>gb|CF281091.1|CF281091 14ETL--08-A04.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--08-A04, mRNA sequence
Length = 582
Score = 583 bits (294), Expect = e-164
Identities = 417/458 (91%)
Strand = Plus / Plus
Query: 102 aggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggacc 161
|||||| | |||||||||| || || |||||||||||| |||||||| |||| || || |
Sbjct: 60 aggggcatatcatggcatcgaagcggatcctcaaggaactaaaggacctgcagaaagatc 119
Query: 162 ctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaacca 221
||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||
Sbjct: 120 ctccaacatcatgcagtgcaggtcctgctggtgaggatatgttttattggcaggcgacca 179
Query: 222 tcatgggtcctcctgatagtccatatgctggaggtgttttcttggtgaacattcatttcc 281
| ||||||||||| |||||||| |||||||| || |||||||| ||||| ||||||||||
Sbjct: 180 ttatgggtcctccagatagtccctatgctggtggagttttcttagtgaatattcatttcc 239
Query: 282 cgccagactaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaa 341
| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 240 ccccggactaccccttcaagcctccaaaggtatcttttaagacaaaggtcttccatccaa 299
Query: 342 acatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtggagccctgctt 401
|||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 300 acatcaatagcaatggaagcatatgccttgacattcttaaggagcaatggagccctgctt 359
Query: 402 tgacaatctctaaggttttgctttctatctgctccctgcttactgatcccaacccagacg 461
||||||| |||||||| |||||||| |||||||| ||||| ||||| |||||||| ||||
Sbjct: 360 tgacaatttctaaggtgttgctttcgatctgctcgctgctcactgaccccaacccggacg 419
Query: 462 accctcttgtccctgagattgctcacatgtacaagacggatcggcctaagtacgaggcga 521
|||||||||||||||||||||| |||||||||||| ||||||| || ||||| ||| |||
Sbjct: 420 accctcttgtccctgagattgcccacatgtacaaggcggatcgtccaaagtatgagacga 479
Query: 522 cagcccgcagctggacccagaagtacgccatgggatga 559
||||||||||||||||||||||||| ||||||||||||
Sbjct: 480 cagcccgcagctggacccagaagtatgccatgggatga 517
>ref|NM_191104.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 447
Score = 579 bits (292), Expect = e-163
Identities = 397/432 (91%)
Strand = Plus / Plus
Query: 128 atcctcaaggaattaaaggacttgcaaaaggaccctccaacatcatgcagtgcaggtcct 187
|||||||||||| |||||||| |||| || || |||||||||||||||||||||||||||
Sbjct: 16 atcctcaaggaactaaaggacctgcagaaagatcctccaacatcatgcagtgcaggtcct 75
Query: 188 gctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatagtccatat 247
|||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||
Sbjct: 76 gctggtgaggatatgttccattggcaggcaaccattatgggccctccagatagtccctat 135
Query: 248 gctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaagcctcca 307
||||| ||||||||||||||||| ||||||||||| || |||||||||||||| ||||||
Sbjct: 136 gctggtggtgttttcttggtgaatattcatttccccccggactaccccttcaaacctcca 195
Query: 308 aaggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgt 367
||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 196 aaggtgtcttttaagacaaaggtcttccatccaaacatcaatagcaatggaagcatatgc 255
Query: 368 cttgacattcttaaggagcagtggagccctgctttgacaatctctaaggttttgctttct 427
|| |||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 256 ctcgacattcttaaggaacagtggagccctgctttgacaatatctaaggtcttgctttcg 315
Query: 428 atctgctccctgcttactgatcccaacccagacgaccctcttgtccctgagattgctcac 487
|||||||| ||||| ||||| |||||||| |||||||||||||||||||||||||| |||
Sbjct: 316 atctgctcgctgctcactgaccccaacccggacgaccctcttgtccctgagattgcccac 375
Query: 488 atgtacaagacggatcggcctaagtacgaggcgacagcccgcagctggacccagaagtac 547
|||||||||||||| || || ||||| ||| ||||||||||||||||||||||||||||
Sbjct: 376 atgtacaagacggaccgtccaaagtatgagacgacagcccgcagctggacccagaagtat 435
Query: 548 gccatgggatga 559
||||||||||||
Sbjct: 436 gccatgggatga 447
>gb|CF331283.1|CF331283 NACL--07-F14.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--07-F14, mRNA sequence
Length = 615
Score = 555 bits (280), Expect = e-155
Identities = 364/392 (92%)
Strand = Plus / Plus
Query: 168 catcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaaccatcatgg 227
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||
Sbjct: 1 catcatgcagtgcaggtcctgctggtgaggatatgttccattggcaggcgaccattatgg 60
Query: 228 gtcctcctgatagtccatatgctggaggtgttttcttggtgaacattcatttcccgccag 287
||||||| |||||||| |||||||| || |||||||| ||||| ||||||||||| || |
Sbjct: 61 gtcctccagatagtccctatgctggtggagttttcttagtgaatattcatttccccccgg 120
Query: 288 actaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaaacatca 347
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 121 actaccccttcaagcctccaaaggtatcttttaagacaaaggtcttccatccaaacatca 180
Query: 348 atagtaatggaagcatatgtcttgacattcttaaggagcagtggagccctgctttgacaa 407
|||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 181 atagcaatggaagcatatgccttgacattcttaaggagcaatggagccctgctttgacaa 240
Query: 408 tctctaaggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctc 467
| |||||||| |||||||| |||||||| ||||| ||||| |||||||| ||||||||||
Sbjct: 241 tttctaaggtgttgctttcgatctgctcgctgctcactgaccccaacccggacgaccctc 300
Query: 468 ttgtccctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagccc 527
|||||||||||||||| |||||||||||||||||||| || ||||| ||| |||||||||
Sbjct: 301 ttgtccctgagattgcccacatgtacaagacggatcgtccaaagtatgagacgacagccc 360
Query: 528 gcagctggacccagaagtacgccatgggatga 559
||||||||||||||||||| ||||||||||||
Sbjct: 361 gcagctggacccagaagtatgccatgggatga 392
>gb|AU197755.1|AU197755 AU197755 Rice mature leaf Oryza sativa (japonica cultivar-group)
cDNA clone S21204, mRNA sequence
Length = 475
Score = 535 bits (270), Expect = e-149
Identities = 384/422 (90%)
Strand = Plus / Plus
Query: 102 aggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggacc 161
|||||| | |||||||||| || || |||||||||||| |||||||| |||| || || |
Sbjct: 54 aggggcatatcatggcatcgaagcggatcctcaaggaactaaaggacctgcagaaagatc 113
Query: 162 ctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaacca 221
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 114 ctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccattggcaggcgacca 173
Query: 222 tcatgggtcctcctgatagtccatatgctggaggtgttttcttggtgaacattcatttcc 281
| ||||||||||| |||||||| |||||||| || |||||||| ||||| ||||||||||
Sbjct: 174 ttatgggtcctccagatagtccctatgctggtggagttttcttagtgaatattcatttcc 233
Query: 282 cgccagactaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaa 341
| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 234 ccccggactaccccttcaagcctccaaaggtatctttcaagacaaaggtcttccatccaa 293
Query: 342 acatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtggagccctgctt 401
|||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 294 acatcaatagcaatggaagcatatgccttgacattcttaaggagcaatggagccctgctt 353
Query: 402 tgacaatctctaaggttttgctttctatctgctccctgcttactgatcccaacccagacg 461
||||||| |||||||| |||||||| |||||||| ||||| ||||| |||||||| ||||
Sbjct: 354 tgacaatttctaaggtgttgctttcgatctgctcgctgctcactgaccccaacccggacg 413
Query: 462 accctcttgtccctgagattgctcacatgtacaagacggatcggcctaagtacgaggcga 521
|||||||||||||||||||||| |||||||||||||||||||| || ||||| ||| |||
Sbjct: 414 accctcttgtccctgagattgcccacatgtacaagacggatcgtccaaagtatgagacga 473
Query: 522 ca 523
||
Sbjct: 474 ca 475
>gb|CF316384.1|CF316384 HD--05-K12.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--05-K12, mRNA sequence
Length = 613
Score = 535 bits (270), Expect = e-149
Identities = 360/390 (92%)
Strand = Plus / Minus
Query: 170 tcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggt 229
|||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 613 tcatgcagtgcaggtcctgctggtgaggatatgttccattggcaggcgaccattatgggt 554
Query: 230 cctcctgatagtccatatgctggaggtgttttcttggtgaacattcatttcccgccagac 289
||||| |||||||| |||||||| || |||||||| ||||| ||||||||||| || ||
Sbjct: 553 cctccagatagtccctatgctggtggagttttcttagtgaatattcatttccccccggaa 494
Query: 290 taccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaaacatcaat 349
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 493 taccccttcaagcctccaaaggtatcttttaagacaaaggtcttccatccaaacatcaat 434
Query: 350 agtaatggaagcatatgtcttgacattcttaaggagcagtggagccctgctttgacaatc 409
|| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 433 agcaatggaagcatatgccttgacattcttaaggagcaatggagccctgctttgacaatt 374
Query: 410 tctaaggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctctt 469
|||||||| |||||||| |||||||| ||||| ||||| |||||||| ||||||||||||
Sbjct: 373 tctaaggtgttgctttcgatctgctcgctgctcactgaccccaacccggacgaccctctt 314
Query: 470 gtccctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagcccgc 529
|||||||||||||| |||||||||||||||||||| || ||||| ||| |||||||||||
Sbjct: 313 gtccctgagattgcccacatgtacaagacggatcgtccaaagtatgagacgacagcccgc 254
Query: 530 agctggacccagaagtacgccatgggatga 559
||||||||||||||||| ||||| ||||||
Sbjct: 253 agctggacccagaagtatgccattggatga 224
>gb|CF320409.1|CF320409 HD--11-E18.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--11-E18, mRNA sequence
Length = 543
Score = 424 bits (214), Expect = e-116
Identities = 274/294 (93%)
Strand = Plus / Minus
Query: 266 gtgaacattcatttcccgccagactaccccttcaagcctccaaaggtatcttttaagacg 325
||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gtgaatattcatttccccccggactaccccttcaagcctccaaaggtatcttttaagaca 483
Query: 326 aaggtcttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggag 385
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 482 aaggtcttccatccaaacatcaatagcaatggaagcatatgccttgacattcttaaggag 423
Query: 386 cagtggagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttact 445
|| |||||||||||||||||||| |||||||| |||||||| |||||||| ||||| |||
Sbjct: 422 caatggagccctgctttgacaatttctaaggtgttgctttcgatctgctcgctgctcact 363
Query: 446 gatcccaacccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcgg 505
|| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 362 gaccccaacccggacgaccctcttgtccctgagattgcccacatgtacaagacggatcgt 303
Query: 506 cctaagtacgaggcgacagcccgcagctggacccagaagtacgccatgggatga 559
|| ||||| ||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 302 ccaaagtatgagacgacagcccgcagctggacccagaagtatgccatgggatga 249
>gb|AU029866.1|AU029866 AU029866 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E50054_1A, mRNA sequence
Length = 445
Score = 400 bits (202), Expect = e-109
Identities = 264/285 (92%)
Strand = Plus / Plus
Query: 275 catttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaaggtcttc 334
|||||||| || |||||| ||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1 catttccccccggactacnccttcaagcctccaaaggtatctttcaagacaaaggtcttc 60
Query: 335 catccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtggagc 394
||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 61 catccaaacatcaatagcaatggaagcatatgccttgacattcttaaggagcaatggagc 120
Query: 395 cctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatcccaac 454
|||||||||||||| |||||||| |||||||| |||||||| ||||| ||||| ||||||
Sbjct: 121 cctgctttgacaatttctaaggtgttgctttcgatctgctcgctgctcactgaccccaac 180
Query: 455 ccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcggcctaagtac 514
|| |||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 181 ccggacgaccctcttgtccctgagattgcccacatgtacaagacggatcgtccaaagtat 240
Query: 515 gaggcgacagcccgcagctggacccagaagtacgccatgggatga 559
||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 241 gagacgacagcccgcagctggacccagaagtatgccatgggatga 285
>gb|CF331282.1|CF331282 NACL--07-F14.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--07-F14, mRNA sequence
Length = 492
Score = 391 bits (197), Expect = e-106
Identities = 251/269 (93%)
Strand = Plus / Minus
Query: 291 accccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaaacatcaata 350
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 492 accccttcaagcctccaaaggtatcttttaagacaaaggtcttccatccaaacatcaata 433
Query: 351 gtaatggaagcatatgtcttgacattcttaaggagcagtggagccctgctttgacaatct 410
| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 432 gcaatggaagcatatgccttgacattcttaaggagcaatggagccctgctttgacaattt 373
Query: 411 ctaaggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttg 470
|||||| |||||||| |||||||| ||||| ||||| |||||||| |||||||||||||
Sbjct: 372 ttaaggtgttgctttcgatctgctcgctgctcactgaccccaacccggacgaccctcttg 313
Query: 471 tccctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagcccgca 530
||||||||||||| |||||||||||||||||||| || ||||| ||| ||||||||||||
Sbjct: 312 tccctgagattgcccacatgtacaagacggatcgtccaaagtatgagacgacagcccgca 253
Query: 531 gctggacccagaagtacgccatgggatga 559
|||||||||||||||| ||||||||||||
Sbjct: 252 gctggacccagaagtatgccatgggatga 224
>gb|AU070799.1|AU070799 AU070799 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10261_1A, mRNA sequence
Length = 362
Score = 327 bits (165), Expect = 6e-087
Identities = 213/229 (93%)
Strand = Plus / Plus
Query: 331 cttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtg 390
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||
Sbjct: 1 cttccatccaaacatcaatagcaatggaagcatatgccttgacattcttaaggagcaatg 60
Query: 391 gagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatcc 450
|||||||||||||||||| |||||||| |||||||| |||||||| ||||| ||||| ||
Sbjct: 61 gagccctgctttgacaatttctaaggtgttgctttcgatctgctcgctgctcactgaccc 120
Query: 451 caacccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcggcctaa 510
|||||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||
Sbjct: 121 caacccggacgaccctcttgtccctgagattgcccacatgtacaagacggatcgtccaaa 180
Query: 511 gtacgaggcgacagcccgcagctggacccagaagtacgccatgggatga 559
||| ||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 181 gtatgagacgacagcccgcagctggacccagaagtatgccatgggatga 229
>gb|AU162581.1|AU162581 AU162581 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10261, mRNA sequence
Length = 486
Score = 325 bits (164), Expect = 2e-086
Identities = 212/228 (92%)
Strand = Plus / Plus
Query: 332 ttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtgg 391
|||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||
Sbjct: 1 ttccatccaaacatcaatagcaatggaagcatatgccttgacattcttaaggagcaatgg 60
Query: 392 agccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatccc 451
||||||||||||||||| |||||||| |||||||| |||||||| ||||| ||||| |||
Sbjct: 61 agccctgctttgacaatttctaaggtgttgctttcgatctgctcgctgctcactgacccc 120
Query: 452 aacccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcggcctaag 511
||||| |||||||||||||||||||||||||| |||||||||||||||||||| || |||
Sbjct: 121 aacccggacgaccctcttgtccctgagattgcccacatgtacaagacggatcgtccaaag 180
Query: 512 tacgaggcgacagcccgcagctggacccagaagtacgccatgggatga 559
|| ||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 181 tatgagacgacagcccgcagctggacccagaagtatgccatgggatga 228
>gb|C19370.1|C19370 C19370 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10318_1A, mRNA sequence
Length = 271
Score = 319 bits (161), Expect = 1e-084
Identities = 219/239 (91%)
Strand = Plus / Plus
Query: 128 atcctcaaggaattaaaggacttgcaaaaggaccctccaacatcatgcagtgcaggtcct 187
|||||||||||| |||||||| |||| || || |||||||||||||||||||||||||||
Sbjct: 30 atcctcaaggaactaaaggacctgcagaaagatcctccaacatcatgcagtgcaggtcct 89
Query: 188 gctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatagtccatat 247
|||||||||||||||||||| |||||||| ||||| ||||||||||| |||||||| |||
Sbjct: 90 gctggtgaggatatgttccattggcaggcgaccattatgggtcctccagatagtccctat 149
Query: 248 gctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaagcctcca 307
||||| || ||||||| ||||| ||||||||||| || |||||||||||||||||||||
Sbjct: 150 gctggtggagttttctnagtgaatattcatttccccccggactaccccttcaagcctcca 209
Query: 308 aaggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatg 366
||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 210 aaggtatctttnaagacaaaggtcttccatccaaacatcaatagcaatggaagcatatg 268
>gb|AU057153.1|AU057153 AU057153 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S21204_2Z, mRNA sequence
Length = 465
Score = 311 bits (157), Expect = 3e-082
Identities = 207/224 (92%)
Strand = Plus / Plus
Query: 336 atccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtggagcc 395
|||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 1 atccaaacatcaatagcaatggaagcatatgccttgacattcttaaggagcaatggagcc 60
Query: 396 ctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatcccaacc 455
||||||||||||| |||||||| |||||||| |||||||| ||||| ||||| |||||||
Sbjct: 61 ctgctttgacaatttctaaggtgttgctttcgatctgctcgctgctcactgaccccaacc 120
Query: 456 cagacgaccctcttgtccctgagattgctcacatgtacaagacggatcggcctaagtacg 515
| |||||||||||||||||||||||||| |||||||||||||||||||| || |||| |
Sbjct: 121 cggacgaccctcttgtccctgagattgcccacatgtacaagacggatcgtccaaagtntg 180
Query: 516 aggcgacagcccgcagctggacccagaagtacgccatgggatga 559
|| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 181 agacgacagcccgcagctggacccagaagtatgccatgggatga 224
>gb|AU094999.1|AU094999 AU094999 Rice immature leaf including apical meristem (under long
day condition) Oryza sativa (japonica cultivar-group)
cDNA clone E50054, mRNA sequence
Length = 463
Score = 278 bits (140), Expect = 5e-072
Identities = 198/219 (90%)
Strand = Plus / Plus
Query: 341 aacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagtggagccctgct 400
||||||||||| |||||||||||||| |||||||||||||||||||| |||| |||||||
Sbjct: 1 aacatcaatagcaatggaagcatatgccttgacattcttaaggagcaatgganccctgct 60
Query: 401 ttgacaatctctaaggttttgctttctatctgctccctgcttactgatcccaacccagac 460
|||||||| |||||||| |||||||| |||||||| ||||| ||||| |||||||| |||
Sbjct: 61 ttgacaatttctaaggtgttgctttcgatctgctcgctgctcactgaccccaacccggac 120
Query: 461 gaccctcttgtccctgagattgctcacatgtacaagacggatcggcctaagtacgaggcg 520
|||||| |||||||||||||||| | |||||||||||||||||| || |||| ||| ||
Sbjct: 121 gaccctnttgtccctgagattgcccncatgtacaagacggatcgtccaaagtntgagacg 180
Query: 521 acagcccgcagctggacccagaagtacgccatgggatga 559
||||||||||||||| |||||||||| ||||||||||||
Sbjct: 181 acagcccgcagctggncccagaagtatgccatgggatga 219
>gb|AU162214.1|AU162214 AU162214 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E10318, mRNA sequence
Length = 451
Score = 250 bits (126), Expect = 1e-063
Identities = 203/225 (90%), Gaps = 3/225 (1%)
Strand = Plus / Plus
Query: 338 ccaaacatcaatagtaatgg-aagcatatgtcttgacattcttaaggagcagtgg-agcc 395
|||||||||||||| ||||| |||||||| |||||||||||||||||||| ||| ||||
Sbjct: 1 ccaaacatcaatagcaatgggaagcatatnccttgacattcttaaggagcaatgggagcc 60
Query: 396 ctgctttg-acaatctctaaggttttgctttctatctgctccctgcttactgatcccaac 454
||||||| ||||| |||||||| |||||||| |||||||| ||||| ||||| || |||
Sbjct: 61 ttgctttggacaatttctaaggtgttgctttcgatctgctcgctgctcactgacccaaac 120
Query: 455 ccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcggcctaagtac 514
|| |||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 121 ccggacgaccctcttgtccctgagattgcccacatgtacaagacggatcgtccaaagtat 180
Query: 515 gaggcgacagcccgcagctggacccagaagtacgccatgggatga 559
||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 181 gagacgacagcccgcagctggacccagaagtatgccatgggatga 225
>gb|AU223080.1|AU223080 AU223080 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S3563, mRNA sequence
Length = 456
Score = 208 bits (105), Expect = 4e-051
Identities = 189/215 (87%), Gaps = 3/215 (1%)
Strand = Plus / Plus
Query: 348 atagtaatggaagcatatgtcttgacattcttaagg-agcagtggagccctgctttgaca 406
|||| |||||||||||||| |||||||||||||||| |||| ||||||||||||||| ||
Sbjct: 1 atagcaatggaagcatatgccttgacattcttaagggagcaatggagccctgctttgnca 60
Query: 407 atctctaaggttttgcttt-ctatctgctccctgcttactgatcccaacccagacgaccc 465
|| | |||||| ||||||| | || ||||| ||||| ||||| |||||||| | ||||||
Sbjct: 61 atttttaaggtnttgcttttcgatntgctcgctgctcactgaccccaacccgggcgaccc 120
Query: 466 tcttgtccctgagattgctcacatgtacaagacggatcggcctaagtacgaggc-gacag 524
|||||| ||||||||||| |||||||||||||||||| | || ||||| || | |||||
Sbjct: 121 tcttgtncctgagattgcccacatgtacaagacggatngtccaaagtatnagacggacag 180
Query: 525 cccgcagctggacccagaagtacgccatgggatga 559
|||||||||||||||||||||| ||||||||||||
Sbjct: 181 cccgcagctggacccagaagtatgccatgggatga 215
>gb|D41217.1|D41217 RICS3563A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 358
Score = 200 bits (101), Expect = 9e-049
Identities = 152/169 (89%)
Strand = Plus / Plus
Query: 111 tcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggaccctccaacat 170
|||||||||| || || |||||||||||| |||||||| |||| || || ||||||||||
Sbjct: 190 tcatggcatcgaagcggatcctcaaggaactaaaggacctgcagaaagatcctccaacat 249
Query: 171 catgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtc 230
||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||
Sbjct: 250 catgcagtgcaggtcctgctggtgaggatatgttccattggcaggcgaccattatgggtc 309
Query: 231 ctcctgatagtccatatgctggaggtgttttcttggtgaacattcattt 279
|||| |||||||| |||||||| || |||||||| ||||| ||||||||
Sbjct: 310 ctccagatagtccctatgctggtggagttttcttagtgaatattcattt 358
>dbj|AB074411.1| Oryza sativa (japonica cultivar-group) mRNA for
ubiquitin-conjugating enzyme OsUBC5a, complete cds
Length = 731
Score = 198 bits (100), Expect = 4e-048
Identities = 301/368 (81%)
Strand = Plus / Plus
Query: 150 tgcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccact 209
|||| ||||| || || |||||||||||||||||||||| |||||| || ||||||||||
Sbjct: 141 tgcagaaggatccccctacatcatgcagtgcaggtcctgttggtgaagacatgttccact 200
Query: 210 ggcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttggtga 269
|||||||||| || |||||||| ||||||| ||||||||||| || |||||| | || |
Sbjct: 201 ggcaggcaacgataatgggtccatctgatagcccatatgctggtggagttttcctagtta 260
Query: 270 acattcatttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaagg 329
||| || ||||| || || || |||||||| || || ||||| | ||| || ||||
Sbjct: 261 ccatccacttccctcctgattatcccttcaaaccacccaaggtggcgtttcgcaccaagg 320
Query: 330 tcttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagt 389
| ||||||||||||||||| || || || ||||| || |||||||| |||||||| || |
Sbjct: 321 ttttccatccaaacatcaacagcaacgggagcatttgccttgacatccttaaggaccaat 380
Query: 390 ggagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatc 449
||||||| || | || || || ||||| ||||| || ||||| |||||||| |||||||
Sbjct: 381 ggagcccagcactaaccatttccaaggtgttgctgtcaatctgttccctgctgactgatc 440
Query: 450 ccaacccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcggccta 509
| ||||| || || ||||| ||||||||||| || |||||||||||||| ||| ||| |
Sbjct: 441 cgaaccctgatgatcctctggtccctgagatcgcccacatgtacaagacagataggcaca 500
Query: 510 agtacgag 517
||||||||
Sbjct: 501 agtacgag 508
>dbj|AK063826.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-A09, full
insert sequence
Length = 767
Score = 198 bits (100), Expect = 4e-048
Identities = 301/368 (81%)
Strand = Plus / Plus
Query: 150 tgcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccact 209
|||| ||||| || || |||||||||||||||||||||| |||||| || ||||||||||
Sbjct: 153 tgcagaaggatccccctacatcatgcagtgcaggtcctgttggtgaagacatgttccact 212
Query: 210 ggcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttggtga 269
|||||||||| || |||||||| ||||||| ||||||||||| || |||||| | || |
Sbjct: 213 ggcaggcaacgataatgggtccatctgatagcccatatgctggtggagttttcctagtta 272
Query: 270 acattcatttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaagg 329
||| || ||||| || || || |||||||| || || ||||| | ||| || ||||
Sbjct: 273 ccatccacttccctcctgattatcccttcaaaccacccaaggtggcgtttcgcaccaagg 332
Query: 330 tcttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagt 389
| ||||||||||||||||| || || || ||||| || |||||||| |||||||| || |
Sbjct: 333 ttttccatccaaacatcaacagcaacgggagcatttgccttgacatccttaaggaccaat 392
Query: 390 ggagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatc 449
||||||| || | || || || ||||| ||||| || ||||| |||||||| |||||||
Sbjct: 393 ggagcccagcactaaccatttccaaggtgttgctgtcaatctgttccctgctgactgatc 452
Query: 450 ccaacccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcggccta 509
| ||||| || || ||||| ||||||||||| || |||||||||||||| ||| ||| |
Sbjct: 453 cgaaccctgatgatcctctggtccctgagatcgcccacatgtacaagacagataggcaca 512
Query: 510 agtacgag 517
||||||||
Sbjct: 513 agtacgag 520
>dbj|AK099284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023129D13, full
insert sequence
Length = 754
Score = 198 bits (100), Expect = 4e-048
Identities = 301/368 (81%)
Strand = Plus / Plus
Query: 150 tgcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccact 209
|||| ||||| || || |||||||||||||||||||||| |||||| || ||||||||||
Sbjct: 143 tgcagaaggatccccctacatcatgcagtgcaggtcctgttggtgaagacatgttccact 202
Query: 210 ggcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttggtga 269
|||||||||| || |||||||| ||||||| ||||||||||| || |||||| | || |
Sbjct: 203 ggcaggcaacgataatgggtccatctgatagcccatatgctggtggagttttcctagtta 262
Query: 270 acattcatttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaagg 329
||| || ||||| || || || |||||||| || || ||||| | ||| || ||||
Sbjct: 263 ccatccacttccctcctgattatcccttcaaaccacccaaggtggcgtttcgcaccaagg 322
Query: 330 tcttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagt 389
| ||||||||||||||||| || || || ||||| || |||||||| |||||||| || |
Sbjct: 323 ttttccatccaaacatcaacagcaacgggagcatttgccttgacatccttaaggaccaat 382
Query: 390 ggagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatc 449
||||||| || | || || || ||||| ||||| || ||||| |||||||| |||||||
Sbjct: 383 ggagcccagcactaaccatttccaaggtgttgctgtcaatctgttccctgctgactgatc 442
Query: 450 ccaacccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcggccta 509
| ||||| || || ||||| ||||||||||| || |||||||||||||| ||| ||| |
Sbjct: 443 cgaaccctgatgatcctctggtccctgagatcgcccacatgtacaagacagataggcaca 502
Query: 510 agtacgag 517
||||||||
Sbjct: 503 agtacgag 510
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 194 bits (98), Expect = 6e-047
Identities = 134/146 (91%)
Strand = Plus / Plus
Query: 414 aggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgtcc 473
|||| |||||||| |||||||| ||||| ||||| |||||||| ||||||||||||||||
Sbjct: 35015376 aggtgttgctttcgatctgctcgctgctcactgaccccaacccggacgaccctcttgtcc 35015435
Query: 474 ctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagcccgcagct 533
|||||||||| |||||||||||||||||||| || ||||| ||| |||||||||||||||
Sbjct: 35015436 ctgagattgcccacatgtacaagacggatcgtccaaagtatgagacgacagcccgcagct 35015495
Query: 534 ggacccagaagtacgccatgggatga 559
||||||||||||| ||||||||||||
Sbjct: 35015496 ggacccagaagtatgccatgggatga 35015521
Score = 190 bits (96), Expect = 9e-046
Identities = 135/148 (91%)
Strand = Plus / Plus
Query: 414 aggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgtcc 473
|||| |||||||| |||||||| ||||| ||||| |||||||| ||||||||||||||||
Sbjct: 34993193 aggtcttgctttcgatctgctcgctgctcactgaccccaacccggacgaccctcttgtcc 34993252
Query: 474 ctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagcccgcagct 533
|||||||||| ||||||||||||||||| || || ||||| ||| |||||||||||||||
Sbjct: 34993253 ctgagattgcccacatgtacaagacggaccgtccaaagtatgagacgacagcccgcagct 34993312
Query: 534 ggacccagaagtacgccatgggatgaaa 561
||||||||||||| ||||||||||||||
Sbjct: 34993313 ggacccagaagtatgccatgggatgaaa 34993340
Score = 182 bits (92), Expect = 2e-043
Identities = 122/132 (92%)
Strand = Plus / Plus
Query: 181 aggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatag 240
||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |||||
Sbjct: 34992279 aggtcctgctggtgaggatatgttccattggcaggcaaccattatgggccctccagatag 34992338
Query: 241 tccatatgctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaa 300
||| |||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct: 34992339 tccctatgctggtggtgttttcttggtgaatattcatttccccccggactaccccttcaa 34992398
Query: 301 gcctccaaaggt 312
|||||||||||
Sbjct: 34992399 acctccaaaggt 34992410
Score = 174 bits (88), Expect = 5e-041
Identities = 121/132 (91%)
Strand = Plus / Plus
Query: 181 aggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatag 240
||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 35013581 aggtcctgctggtgaggatatgttccattggcaggcgaccattatgggtcctccagatag 35013640
Query: 241 tccatatgctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaa 300
||| |||||||| || |||||||| ||||| ||||||||||| || ||||||||||||||
Sbjct: 35013641 tccctatgctggtggagttttcttagtgaatattcatttccccccggactaccccttcaa 35013700
Query: 301 gcctccaaaggt 312
||||||||||||
Sbjct: 35013701 gcctccaaaggt 35013712
Score = 168 bits (85), Expect = 3e-039
Identities = 103/109 (94%)
Strand = Plus / Plus
Query: 309 aggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtc 368
|||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 35014185 aggtatctttcaagacaaaggtcttccatccaaacatcaatagcaatggaagcatatgcc 35014244
Query: 369 ttgacattcttaaggagcagtggagccctgctttgacaatctctaaggt 417
||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 35014245 ttgacattcttaaggagcaatggagccctgctttgacaatttctaaggt 35014293
Score = 161 bits (81), Expect = 8e-037
Identities = 102/109 (93%)
Strand = Plus / Plus
Query: 309 aggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtc 368
|||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 34992693 aggtgtcttttaagacaaaggtcttccatccaaacatcaatagcaatggaagcatatgcc 34992752
Query: 369 ttgacattcttaaggagcagtggagccctgctttgacaatctctaaggt 417
| |||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 34992753 tcgacattcttaaggaacagtggagccctgctttgacaatatctaaggt 34992801
Score = 87.7 bits (44), Expect = 9e-015
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 101 caggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggac 160
||||||| | |||||||||| || || |||||||||||| |||||||| |||| || ||
Sbjct: 35012946 caggggcatatcatggcatcgaagcggatcctcaaggaactaaaggacctgcagaaagat 35013005
Query: 161 cctccaacatcatgcagtgcaggt 184
||||||||||||||||||||||||
Sbjct: 35013006 cctccaacatcatgcagtgcaggt 35013029
Score = 85.7 bits (43), Expect = 4e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 180 caggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgata 239
||||||||| |||||| || |||||||||||||||||||| || |||||||| ||||||
Sbjct: 26856461 caggtcctgttggtgaagacatgttccactggcaggcaacgataatgggtccatctgata 26856402
Query: 240 gtccatatgctggaggtgttttc 262
| ||||||||||| || ||||||
Sbjct: 26856401 gcccatatgctggtggagttttc 26856379
Score = 79.8 bits (40), Expect = 2e-012
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 101 caggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggac 160
|||| |||| ||||||| || || || |||||||||||| |||||||| |||| || ||
Sbjct: 34991599 caggagcttatcatggcgtcgaagcggatcctcaaggaactaaaggacctgcagaaagat 34991658
Query: 161 cctccaacatcatgcagtgcaggt 184
||||||||||||||||||||||||
Sbjct: 34991659 cctccaacatcatgcagtgcaggt 34991682
Score = 79.8 bits (40), Expect = 2e-012
Identities = 88/104 (84%)
Strand = Plus / Minus
Query: 414 aggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgtcc 473
|||| ||||| || ||||| |||||||| |||||||| ||||| || || ||||| ||||
Sbjct: 26855391 aggtgttgctgtcaatctgttccctgctgactgatccgaaccctgatgatcctctggtcc 26855332
Query: 474 ctgagattgctcacatgtacaagacggatcggcctaagtacgag 517
||||||| || |||||||||||||| ||| ||| |||||||||
Sbjct: 26855331 ctgagatcgcccacatgtacaagacagataggcacaagtacgag 26855288
Score = 61.9 bits (31), Expect = 5e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 326 aaggtcttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggag 385
||||| ||||||||||||||||| || || || ||||| || |||||||| ||||||||
Sbjct: 26855588 aaggttttccatccaaacatcaacagcaacgggagcatttgccttgacatccttaaggac 26855529
Query: 386 cagtggagccc 396
|| ||||||||
Sbjct: 26855528 caatggagccc 26855518
Score = 42.1 bits (21), Expect = 0.49
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 150 tgcaaaaggaccctccaacatcatgcagtgcaggtcctgct 190
|||| ||||| || || ||||||||||||||||||| ||||
Sbjct: 26858034 tgcagaaggatccccctacatcatgcagtgcaggtcttgct 26857994
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 194 bits (98), Expect = 6e-047
Identities = 134/146 (91%)
Strand = Plus / Plus
Query: 414 aggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgtcc 473
|||| |||||||| |||||||| ||||| ||||| |||||||| ||||||||||||||||
Sbjct: 9462759 aggtgttgctttcgatctgctcgctgctcactgaccccaacccggacgaccctcttgtcc 9462818
Query: 474 ctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagcccgcagct 533
|||||||||| |||||||||||||||||||| || ||||| ||| |||||||||||||||
Sbjct: 9462819 ctgagattgcccacatgtacaagacggatcgtccaaagtatgagacgacagcccgcagct 9462878
Query: 534 ggacccagaagtacgccatgggatga 559
||||||||||||| ||||||||||||
Sbjct: 9462879 ggacccagaagtatgccatgggatga 9462904
Score = 190 bits (96), Expect = 9e-046
Identities = 135/148 (91%)
Strand = Plus / Plus
Query: 414 aggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgtcc 473
|||| |||||||| |||||||| ||||| ||||| |||||||| ||||||||||||||||
Sbjct: 9440576 aggtcttgctttcgatctgctcgctgctcactgaccccaacccggacgaccctcttgtcc 9440635
Query: 474 ctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagcccgcagct 533
|||||||||| ||||||||||||||||| || || ||||| ||| |||||||||||||||
Sbjct: 9440636 ctgagattgcccacatgtacaagacggaccgtccaaagtatgagacgacagcccgcagct 9440695
Query: 534 ggacccagaagtacgccatgggatgaaa 561
||||||||||||| ||||||||||||||
Sbjct: 9440696 ggacccagaagtatgccatgggatgaaa 9440723
Score = 182 bits (92), Expect = 2e-043
Identities = 122/132 (92%)
Strand = Plus / Plus
Query: 181 aggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatag 240
||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |||||
Sbjct: 9439662 aggtcctgctggtgaggatatgttccattggcaggcaaccattatgggccctccagatag 9439721
Query: 241 tccatatgctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaa 300
||| |||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct: 9439722 tccctatgctggtggtgttttcttggtgaatattcatttccccccggactaccccttcaa 9439781
Query: 301 gcctccaaaggt 312
|||||||||||
Sbjct: 9439782 acctccaaaggt 9439793
Score = 174 bits (88), Expect = 5e-041
Identities = 121/132 (91%)
Strand = Plus / Plus
Query: 181 aggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatag 240
||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 9460964 aggtcctgctggtgaggatatgttccattggcaggcgaccattatgggtcctccagatag 9461023
Query: 241 tccatatgctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaa 300
||| |||||||| || |||||||| ||||| ||||||||||| || ||||||||||||||
Sbjct: 9461024 tccctatgctggtggagttttcttagtgaatattcatttccccccggactaccccttcaa 9461083
Query: 301 gcctccaaaggt 312
||||||||||||
Sbjct: 9461084 gcctccaaaggt 9461095
Score = 168 bits (85), Expect = 3e-039
Identities = 103/109 (94%)
Strand = Plus / Plus
Query: 309 aggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtc 368
|||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 9461568 aggtatctttcaagacaaaggtcttccatccaaacatcaatagcaatggaagcatatgcc 9461627
Query: 369 ttgacattcttaaggagcagtggagccctgctttgacaatctctaaggt 417
||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 9461628 ttgacattcttaaggagcaatggagccctgctttgacaatttctaaggt 9461676
Score = 161 bits (81), Expect = 8e-037
Identities = 102/109 (93%)
Strand = Plus / Plus
Query: 309 aggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtc 368
|||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 9440076 aggtgtcttttaagacaaaggtcttccatccaaacatcaatagcaatggaagcatatgcc 9440135
Query: 369 ttgacattcttaaggagcagtggagccctgctttgacaatctctaaggt 417
| |||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 9440136 tcgacattcttaaggaacagtggagccctgctttgacaatatctaaggt 9440184
Score = 87.7 bits (44), Expect = 9e-015
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 101 caggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggac 160
||||||| | |||||||||| || || |||||||||||| |||||||| |||| || ||
Sbjct: 9460329 caggggcatatcatggcatcgaagcggatcctcaaggaactaaaggacctgcagaaagat 9460388
Query: 161 cctccaacatcatgcagtgcaggt 184
||||||||||||||||||||||||
Sbjct: 9460389 cctccaacatcatgcagtgcaggt 9460412
Score = 85.7 bits (43), Expect = 4e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 180 caggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgata 239
||||||||| |||||| || |||||||||||||||||||| || |||||||| ||||||
Sbjct: 1303844 caggtcctgttggtgaagacatgttccactggcaggcaacgataatgggtccatctgata 1303785
Query: 240 gtccatatgctggaggtgttttc 262
| ||||||||||| || ||||||
Sbjct: 1303784 gcccatatgctggtggagttttc 1303762
Score = 79.8 bits (40), Expect = 2e-012
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 101 caggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggac 160
|||| |||| ||||||| || || || |||||||||||| |||||||| |||| || ||
Sbjct: 9438982 caggagcttatcatggcgtcgaagcggatcctcaaggaactaaaggacctgcagaaagat 9439041
Query: 161 cctccaacatcatgcagtgcaggt 184
||||||||||||||||||||||||
Sbjct: 9439042 cctccaacatcatgcagtgcaggt 9439065
Score = 79.8 bits (40), Expect = 2e-012
Identities = 88/104 (84%)
Strand = Plus / Minus
Query: 414 aggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgtcc 473
|||| ||||| || ||||| |||||||| |||||||| ||||| || || ||||| ||||
Sbjct: 1302774 aggtgttgctgtcaatctgttccctgctgactgatccgaaccctgatgatcctctggtcc 1302715
Query: 474 ctgagattgctcacatgtacaagacggatcggcctaagtacgag 517
||||||| || |||||||||||||| ||| ||| |||||||||
Sbjct: 1302714 ctgagatcgcccacatgtacaagacagataggcacaagtacgag 1302671
Score = 61.9 bits (31), Expect = 5e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 326 aaggtcttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggag 385
||||| ||||||||||||||||| || || || ||||| || |||||||| ||||||||
Sbjct: 1302971 aaggttttccatccaaacatcaacagcaacgggagcatttgccttgacatccttaaggac 1302912
Query: 386 cagtggagccc 396
|| ||||||||
Sbjct: 1302911 caatggagccc 1302901
Score = 42.1 bits (21), Expect = 0.49
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 150 tgcaaaaggaccctccaacatcatgcagtgcaggtcctgct 190
|||| ||||| || || ||||||||||||||||||| ||||
Sbjct: 1305417 tgcagaaggatccccctacatcatgcagtgcaggtcttgct 1305377
>dbj|AP003446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OJ1529_G03
Length = 100635
Score = 194 bits (98), Expect = 6e-047
Identities = 134/146 (91%)
Strand = Plus / Plus
Query: 414 aggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgtcc 473
|||| |||||||| |||||||| ||||| ||||| |||||||| ||||||||||||||||
Sbjct: 64070 aggtgttgctttcgatctgctcgctgctcactgaccccaacccggacgaccctcttgtcc 64129
Query: 474 ctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagcccgcagct 533
|||||||||| |||||||||||||||||||| || ||||| ||| |||||||||||||||
Sbjct: 64130 ctgagattgcccacatgtacaagacggatcgtccaaagtatgagacgacagcccgcagct 64189
Query: 534 ggacccagaagtacgccatgggatga 559
||||||||||||| ||||||||||||
Sbjct: 64190 ggacccagaagtatgccatgggatga 64215
Score = 190 bits (96), Expect = 9e-046
Identities = 135/148 (91%)
Strand = Plus / Plus
Query: 414 aggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgtcc 473
|||| |||||||| |||||||| ||||| ||||| |||||||| ||||||||||||||||
Sbjct: 41887 aggtcttgctttcgatctgctcgctgctcactgaccccaacccggacgaccctcttgtcc 41946
Query: 474 ctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagcccgcagct 533
|||||||||| ||||||||||||||||| || || ||||| ||| |||||||||||||||
Sbjct: 41947 ctgagattgcccacatgtacaagacggaccgtccaaagtatgagacgacagcccgcagct 42006
Query: 534 ggacccagaagtacgccatgggatgaaa 561
||||||||||||| ||||||||||||||
Sbjct: 42007 ggacccagaagtatgccatgggatgaaa 42034
Score = 182 bits (92), Expect = 2e-043
Identities = 122/132 (92%)
Strand = Plus / Plus
Query: 181 aggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatag 240
||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |||||
Sbjct: 40973 aggtcctgctggtgaggatatgttccattggcaggcaaccattatgggccctccagatag 41032
Query: 241 tccatatgctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaa 300
||| |||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct: 41033 tccctatgctggtggtgttttcttggtgaatattcatttccccccggactaccccttcaa 41092
Query: 301 gcctccaaaggt 312
|||||||||||
Sbjct: 41093 acctccaaaggt 41104
Score = 174 bits (88), Expect = 5e-041
Identities = 121/132 (91%)
Strand = Plus / Plus
Query: 181 aggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatag 240
||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 62275 aggtcctgctggtgaggatatgttccattggcaggcgaccattatgggtcctccagatag 62334
Query: 241 tccatatgctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaa 300
||| |||||||| || |||||||| ||||| ||||||||||| || ||||||||||||||
Sbjct: 62335 tccctatgctggtggagttttcttagtgaatattcatttccccccggactaccccttcaa 62394
Query: 301 gcctccaaaggt 312
||||||||||||
Sbjct: 62395 gcctccaaaggt 62406
Score = 168 bits (85), Expect = 3e-039
Identities = 103/109 (94%)
Strand = Plus / Plus
Query: 309 aggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtc 368
|||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 62879 aggtatctttcaagacaaaggtcttccatccaaacatcaatagcaatggaagcatatgcc 62938
Query: 369 ttgacattcttaaggagcagtggagccctgctttgacaatctctaaggt 417
||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 62939 ttgacattcttaaggagcaatggagccctgctttgacaatttctaaggt 62987
Score = 161 bits (81), Expect = 8e-037
Identities = 102/109 (93%)
Strand = Plus / Plus
Query: 309 aggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtc 368
|||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 41387 aggtgtcttttaagacaaaggtcttccatccaaacatcaatagcaatggaagcatatgcc 41446
Query: 369 ttgacattcttaaggagcagtggagccctgctttgacaatctctaaggt 417
| |||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 41447 tcgacattcttaaggaacagtggagccctgctttgacaatatctaaggt 41495
Score = 87.7 bits (44), Expect = 9e-015
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 101 caggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggac 160
||||||| | |||||||||| || || |||||||||||| |||||||| |||| || ||
Sbjct: 61640 caggggcatatcatggcatcgaagcggatcctcaaggaactaaaggacctgcagaaagat 61699
Query: 161 cctccaacatcatgcagtgcaggt 184
||||||||||||||||||||||||
Sbjct: 61700 cctccaacatcatgcagtgcaggt 61723
Score = 79.8 bits (40), Expect = 2e-012
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 101 caggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggac 160
|||| |||| ||||||| || || || |||||||||||| |||||||| |||| || ||
Sbjct: 40293 caggagcttatcatggcgtcgaagcggatcctcaaggaactaaaggacctgcagaaagat 40352
Query: 161 cctccaacatcatgcagtgcaggt 184
||||||||||||||||||||||||
Sbjct: 40353 cctccaacatcatgcagtgcaggt 40376
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 194 bits (98), Expect = 6e-047
Identities = 134/146 (91%)
Strand = Plus / Plus
Query: 414 aggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgtcc 473
|||| |||||||| |||||||| ||||| ||||| |||||||| ||||||||||||||||
Sbjct: 34934706 aggtgttgctttcgatctgctcgctgctcactgaccccaacccggacgaccctcttgtcc 34934765
Query: 474 ctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagcccgcagct 533
|||||||||| |||||||||||||||||||| || ||||| ||| |||||||||||||||
Sbjct: 34934766 ctgagattgcccacatgtacaagacggatcgtccaaagtatgagacgacagcccgcagct 34934825
Query: 534 ggacccagaagtacgccatgggatga 559
||||||||||||| ||||||||||||
Sbjct: 34934826 ggacccagaagtatgccatgggatga 34934851
Score = 190 bits (96), Expect = 9e-046
Identities = 135/148 (91%)
Strand = Plus / Plus
Query: 414 aggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgtcc 473
|||| |||||||| |||||||| ||||| ||||| |||||||| ||||||||||||||||
Sbjct: 34912523 aggtcttgctttcgatctgctcgctgctcactgaccccaacccggacgaccctcttgtcc 34912582
Query: 474 ctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagcccgcagct 533
|||||||||| ||||||||||||||||| || || ||||| ||| |||||||||||||||
Sbjct: 34912583 ctgagattgcccacatgtacaagacggaccgtccaaagtatgagacgacagcccgcagct 34912642
Query: 534 ggacccagaagtacgccatgggatgaaa 561
||||||||||||| ||||||||||||||
Sbjct: 34912643 ggacccagaagtatgccatgggatgaaa 34912670
Score = 182 bits (92), Expect = 2e-043
Identities = 122/132 (92%)
Strand = Plus / Plus
Query: 181 aggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatag 240
||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |||||
Sbjct: 34911609 aggtcctgctggtgaggatatgttccattggcaggcaaccattatgggccctccagatag 34911668
Query: 241 tccatatgctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaa 300
||| |||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct: 34911669 tccctatgctggtggtgttttcttggtgaatattcatttccccccggactaccccttcaa 34911728
Query: 301 gcctccaaaggt 312
|||||||||||
Sbjct: 34911729 acctccaaaggt 34911740
Score = 174 bits (88), Expect = 5e-041
Identities = 121/132 (91%)
Strand = Plus / Plus
Query: 181 aggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatag 240
||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 34932911 aggtcctgctggtgaggatatgttccattggcaggcgaccattatgggtcctccagatag 34932970
Query: 241 tccatatgctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaa 300
||| |||||||| || |||||||| ||||| ||||||||||| || ||||||||||||||
Sbjct: 34932971 tccctatgctggtggagttttcttagtgaatattcatttccccccggactaccccttcaa 34933030
Query: 301 gcctccaaaggt 312
||||||||||||
Sbjct: 34933031 gcctccaaaggt 34933042
Score = 168 bits (85), Expect = 3e-039
Identities = 103/109 (94%)
Strand = Plus / Plus
Query: 309 aggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtc 368
|||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 34933515 aggtatctttcaagacaaaggtcttccatccaaacatcaatagcaatggaagcatatgcc 34933574
Query: 369 ttgacattcttaaggagcagtggagccctgctttgacaatctctaaggt 417
||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 34933575 ttgacattcttaaggagcaatggagccctgctttgacaatttctaaggt 34933623
Score = 161 bits (81), Expect = 8e-037
Identities = 102/109 (93%)
Strand = Plus / Plus
Query: 309 aggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtc 368
|||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 34912023 aggtgtcttttaagacaaaggtcttccatccaaacatcaatagcaatggaagcatatgcc 34912082
Query: 369 ttgacattcttaaggagcagtggagccctgctttgacaatctctaaggt 417
| |||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 34912083 tcgacattcttaaggaacagtggagccctgctttgacaatatctaaggt 34912131
Score = 87.7 bits (44), Expect = 9e-015
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 101 caggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggac 160
||||||| | |||||||||| || || |||||||||||| |||||||| |||| || ||
Sbjct: 34932276 caggggcatatcatggcatcgaagcggatcctcaaggaactaaaggacctgcagaaagat 34932335
Query: 161 cctccaacatcatgcagtgcaggt 184
||||||||||||||||||||||||
Sbjct: 34932336 cctccaacatcatgcagtgcaggt 34932359
Score = 85.7 bits (43), Expect = 4e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 180 caggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgata 239
||||||||| |||||| || |||||||||||||||||||| || |||||||| ||||||
Sbjct: 26775791 caggtcctgttggtgaagacatgttccactggcaggcaacgataatgggtccatctgata 26775732
Query: 240 gtccatatgctggaggtgttttc 262
| ||||||||||| || ||||||
Sbjct: 26775731 gcccatatgctggtggagttttc 26775709
Score = 79.8 bits (40), Expect = 2e-012
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 101 caggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggac 160
|||| |||| ||||||| || || || |||||||||||| |||||||| |||| || ||
Sbjct: 34910929 caggagcttatcatggcgtcgaagcggatcctcaaggaactaaaggacctgcagaaagat 34910988
Query: 161 cctccaacatcatgcagtgcaggt 184
||||||||||||||||||||||||
Sbjct: 34910989 cctccaacatcatgcagtgcaggt 34911012
Score = 79.8 bits (40), Expect = 2e-012
Identities = 88/104 (84%)
Strand = Plus / Minus
Query: 414 aggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgtcc 473
|||| ||||| || ||||| |||||||| |||||||| ||||| || || ||||| ||||
Sbjct: 26774721 aggtgttgctgtcaatctgttccctgctgactgatccgaaccctgatgatcctctggtcc 26774662
Query: 474 ctgagattgctcacatgtacaagacggatcggcctaagtacgag 517
||||||| || |||||||||||||| ||| ||| |||||||||
Sbjct: 26774661 ctgagatcgcccacatgtacaagacagataggcacaagtacgag 26774618
Score = 61.9 bits (31), Expect = 5e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 326 aaggtcttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggag 385
||||| ||||||||||||||||| || || || ||||| || |||||||| ||||||||
Sbjct: 26774918 aaggttttccatccaaacatcaacagcaacgggagcatttgccttgacatccttaaggac 26774859
Query: 386 cagtggagccc 396
|| ||||||||
Sbjct: 26774858 caatggagccc 26774848
Score = 42.1 bits (21), Expect = 0.49
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 150 tgcaaaaggaccctccaacatcatgcagtgcaggtcctgct 190
|||| ||||| || || ||||||||||||||||||| ||||
Sbjct: 26777364 tgcagaaggatccccctacatcatgcagtgcaggtcttgct 26777324
>gb|C97006.1|C97006 C97006 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C50470_7A, mRNA sequence
Length = 452
Score = 192 bits (97), Expect = 2e-046
Identities = 286/349 (81%)
Strand = Plus / Plus
Query: 150 tgcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccact 209
|||| ||||| || || |||||||||||||||||||||| |||||| || ||||||||||
Sbjct: 94 tgcagaaggatccccctacatcatgcagtgcaggtcctgttggtgaagacatgttccact 153
Query: 210 ggcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttggtga 269
|||||||||| || |||||||| ||||||| ||||||||||| || |||||| | || |
Sbjct: 154 ggcaggcaacgataatgggtccatctgatagcccatatgctggtggagttttcctagtta 213
Query: 270 acattcatttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaagg 329
||| || ||||| || || || |||||||| || || ||||| | ||| || ||||
Sbjct: 214 ccatccacttccctcctgattatcccttcaaaccacccaaggtggcgtttcgcaccaagg 273
Query: 330 tcttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagt 389
| ||||||||||||||||| || || || ||||| || |||||||| |||||||| || |
Sbjct: 274 ttttccatccaaacatcaacagcaacgggagcatttgccttgacatccttaaggaccaat 333
Query: 390 ggagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatc 449
||||||| || | || || || ||||| ||||| || ||||| |||||||| |||||||
Sbjct: 334 ggagcccagcactaaccatttccaaggtgttgctgtcaatctgttccctgctgactgatc 393
Query: 450 ccaacccagacgaccctcttgtccctgagattgctcacatgtacaagac 498
| ||||| || || ||||| ||||||||||| || ||||||||||||||
Sbjct: 394 cgaaccctgatgatcctctggtccctgagatcgcccacatgtacaagac 442
>gb|CV720784.1|CV720784 YBH--01-N10.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--01-N10, mRNA sequence
Length = 453
Score = 192 bits (97), Expect = 2e-046
Identities = 286/349 (81%)
Strand = Plus / Plus
Query: 150 tgcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccact 209
|||| ||||| || || |||||||||||||||||||||| |||||| || ||||||||||
Sbjct: 99 tgcagaaggatccccctacatcatgcagtgcaggtcctgttggtgaagacatgttccact 158
Query: 210 ggcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttggtga 269
|||||||||| || |||||||| ||||||| ||||||||||| || |||||| | || |
Sbjct: 159 ggcaggcaacgataatgggtccatctgatagcccatatgctggtggagttttcctagtta 218
Query: 270 acattcatttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaagg 329
||| || ||||| || || || |||||||| || || ||||| | ||| || ||||
Sbjct: 219 ccatccacttccctcctgattatcccttcaaaccacccaaggtggcgtttcgcaccaagg 278
Query: 330 tcttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagt 389
| ||||||||||||||||| || || || ||||| || |||||||| |||||||| || |
Sbjct: 279 ttttccatccaaacatcaacagcaacgggagcatttgccttgacatccttaaggaccaat 338
Query: 390 ggagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatc 449
||||||| || | || || || ||||| ||||| || ||||| |||||||| |||||||
Sbjct: 339 ggagcccagcactaaccatttccaaggtgttgctgtcaatctgttccctgctgactgatc 398
Query: 450 ccaacccagacgaccctcttgtccctgagattgctcacatgtacaagac 498
| ||||| || || ||||| ||||||||||| || ||||||||||||||
Sbjct: 399 cgaaccctgatgatcctctggtccctgagatcgcccacatgtacaagac 447
>gb|CV728679.1|CV728679 FLO--01-C08.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--01-C08,
mRNA sequence
Length = 501
Score = 192 bits (97), Expect = 2e-046
Identities = 286/349 (81%)
Strand = Plus / Plus
Query: 150 tgcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccact 209
|||| ||||| || || |||||||||||||||||||||| |||||| || ||||||||||
Sbjct: 149 tgcagaaggatccccctacatcatgcagtgcaggtcctgttggtgaagacatgttccact 208
Query: 210 ggcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttggtga 269
|||||||||| || |||||||| ||||||| ||||||||||| || |||||| | || |
Sbjct: 209 ggcaggcaacgataatgggtccatctgatagcccatatgctggtggagttttcctagtta 268
Query: 270 acattcatttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaagg 329
||| || ||||| || || || |||||||| || || ||||| | ||| || ||||
Sbjct: 269 ccatccacttccctcctgattatcccttcaaaccacccaaggtggcgtttcgcaccaagg 328
Query: 330 tcttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagt 389
| ||||||||||||||||| || || || ||||| || |||||||| |||||||| || |
Sbjct: 329 ttttccatccaaacatcaacagcaacgggagcatttgccttgacatccttaaggaccaat 388
Query: 390 ggagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatc 449
||||||| || | || || || ||||| ||||| || ||||| |||||||| |||||||
Sbjct: 389 ggagcccagcactaaccatttccaaggtgttgctgtcaatctgttccctgctgactgatc 448
Query: 450 ccaacccagacgaccctcttgtccctgagattgctcacatgtacaagac 498
| ||||| || || ||||| ||||||||||| || ||||||||||||||
Sbjct: 449 cgaaccctgatgatcctctggtccctgagatcgcccacatgtacaagac 497
>gb|AACV01002584.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002584, whole
genome shotgun sequence
Length = 20295
Score = 190 bits (96), Expect = 9e-046
Identities = 135/148 (91%)
Strand = Plus / Plus
Query: 414 aggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgtcc 473
|||| |||||||| |||||||| ||||| ||||| |||||||| ||||||||||||||||
Sbjct: 16674 aggtcttgctttcgatctgctcgctgctcactgaccccaacccggacgaccctcttgtcc 16733
Query: 474 ctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagcccgcagct 533
|||||||||| ||||||||||||||||| || || ||||| ||| |||||||||||||||
Sbjct: 16734 ctgagattgcccacatgtacaagacggaccgtccaaagtatgagacgacagcccgcagct 16793
Query: 534 ggacccagaagtacgccatgggatgaaa 561
||||||||||||| ||||||||||||||
Sbjct: 16794 ggacccagaagtatgccatgggatgaaa 16821
Score = 182 bits (92), Expect = 2e-043
Identities = 122/132 (92%)
Strand = Plus / Plus
Query: 181 aggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatag 240
||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |||||
Sbjct: 15760 aggtcctgctggtgaggatatgttccattggcaggcaaccattatgggccctccagatag 15819
Query: 241 tccatatgctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaa 300
||| |||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct: 15820 tccctatgctggtggtgttttcttggtgaatattcatttccccccggactaccccttcaa 15879
Query: 301 gcctccaaaggt 312
|||||||||||
Sbjct: 15880 acctccaaaggt 15891
Score = 161 bits (81), Expect = 8e-037
Identities = 102/109 (93%)
Strand = Plus / Plus
Query: 309 aggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtc 368
|||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 16174 aggtgtcttttaagacaaaggtcttccatccaaacatcaatagcaatggaagcatatgcc 16233
Query: 369 ttgacattcttaaggagcagtggagccctgctttgacaatctctaaggt 417
| |||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 16234 tcgacattcttaaggaacagtggagccctgctttgacaatatctaaggt 16282
Score = 79.8 bits (40), Expect = 2e-012
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 101 caggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggac 160
|||| |||| ||||||| || || || |||||||||||| |||||||| |||| || ||
Sbjct: 15080 caggagcttatcatggcgtcgaagcggatcctcaaggaactaaaggacctgcagaaagat 15139
Query: 161 cctccaacatcatgcagtgcaggt 184
||||||||||||||||||||||||
Sbjct: 15140 cctccaacatcatgcagtgcaggt 15163
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 190 bits (96), Expect = 9e-046
Identities = 135/148 (91%)
Strand = Plus / Plus
Query: 414 aggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgtcc 473
|||| |||||||| |||||||| ||||| ||||| |||||||| ||||||||||||||||
Sbjct: 9258359 aggtcttgctttcgatctgctcgctgctcactgaccccaacccggacgaccctcttgtcc 9258418
Query: 474 ctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagcccgcagct 533
|||||||||| ||||||||||||||||| || || ||||| ||| |||||||||||||||
Sbjct: 9258419 ctgagattgcccacatgtacaagacggaccgtccaaagtatgagacgacagcccgcagct 9258478
Query: 534 ggacccagaagtacgccatgggatgaaa 561
||||||||||||| ||||||||||||||
Sbjct: 9258479 ggacccagaagtatgccatgggatgaaa 9258506
Score = 182 bits (92), Expect = 2e-043
Identities = 122/132 (92%)
Strand = Plus / Plus
Query: 181 aggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatag 240
||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |||||
Sbjct: 9257445 aggtcctgctggtgaggatatgttccattggcaggcaaccattatgggccctccagatag 9257504
Query: 241 tccatatgctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaa 300
||| |||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct: 9257505 tccctatgctggtggtgttttcttggtgaatattcatttccccccggactaccccttcaa 9257564
Query: 301 gcctccaaaggt 312
|||||||||||
Sbjct: 9257565 acctccaaaggt 9257576
Score = 182 bits (92), Expect = 2e-043
Identities = 122/132 (92%)
Strand = Plus / Plus
Query: 181 aggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatag 240
||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |||||
Sbjct: 9241014 aggtcctgctggtgaggatatgttccattggcaggcaaccattatgggccctccagatag 9241073
Query: 241 tccatatgctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaa 300
||| |||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct: 9241074 tccctatgctggtggtgttttcttggtgaatattcatttccccccggactaccccttcaa 9241133
Query: 301 gcctccaaaggt 312
|||||||||||
Sbjct: 9241134 acctccaaaggt 9241145
Score = 161 bits (81), Expect = 8e-037
Identities = 102/109 (93%)
Strand = Plus / Plus
Query: 309 aggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtc 368
|||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 9257859 aggtgtcttttaagacaaaggtcttccatccaaacatcaatagcaatggaagcatatgcc 9257918
Query: 369 ttgacattcttaaggagcagtggagccctgctttgacaatctctaaggt 417
| |||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 9257919 tcgacattcttaaggaacagtggagccctgctttgacaatatctaaggt 9257967
Score = 161 bits (81), Expect = 8e-037
Identities = 102/109 (93%)
Strand = Plus / Plus
Query: 309 aggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtc 368
|||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 9241428 aggtgtcttttaagacaaaggtcttccatccaaacatcaatagcaatggaagcatatgcc 9241487
Query: 369 ttgacattcttaaggagcagtggagccctgctttgacaatctctaaggt 417
| |||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 9241488 tcgacattcttaaggaacagtggagccctgctttgacaatatctaaggt 9241536
Score = 85.7 bits (43), Expect = 4e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 180 caggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgata 239
||||||||| |||||| || |||||||||||||||||||| || |||||||| ||||||
Sbjct: 1265748 caggtcctgttggtgaagacatgttccactggcaggcaacgataatgggtccatctgata 1265689
Query: 240 gtccatatgctggaggtgttttc 262
| ||||||||||| || ||||||
Sbjct: 1265688 gcccatatgctggtggagttttc 1265666
Score = 79.8 bits (40), Expect = 2e-012
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 101 caggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggac 160
|||| |||| ||||||| || || || |||||||||||| |||||||| |||| || ||
Sbjct: 9256765 caggagcttatcatggcgtcgaagcggatcctcaaggaactaaaggacctgcagaaagat 9256824
Query: 161 cctccaacatcatgcagtgcaggt 184
||||||||||||||||||||||||
Sbjct: 9256825 cctccaacatcatgcagtgcaggt 9256848
Score = 79.8 bits (40), Expect = 2e-012
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 101 caggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggac 160
|||| |||| ||||||| || || || |||||||||||| |||||||| |||| || ||
Sbjct: 9240334 caggagcttatcatggcgtcgaagcggatcctcaaggaactaaaggacctgcagaaagat 9240393
Query: 161 cctccaacatcatgcagtgcaggt 184
||||||||||||||||||||||||
Sbjct: 9240394 cctccaacatcatgcagtgcaggt 9240417
Score = 79.8 bits (40), Expect = 2e-012
Identities = 88/104 (84%)
Strand = Plus / Minus
Query: 414 aggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgtcc 473
|||| ||||| || ||||| |||||||| |||||||| ||||| || || ||||| ||||
Sbjct: 1264677 aggtgttgctgtcaatctgttccctgctgactgatccgaaccctgatgatcctctggtcc 1264618
Query: 474 ctgagattgctcacatgtacaagacggatcggcctaagtacgag 517
||||||| || |||||||||||||| ||| ||| |||||||||
Sbjct: 1264617 ctgagatcgcccacatgtacaagacagataggcacaagtacgag 1264574
Score = 61.9 bits (31), Expect = 5e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 326 aaggtcttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggag 385
||||| ||||||||||||||||| || || || ||||| || |||||||| ||||||||
Sbjct: 1264875 aaggttttccatccaaacatcaacagcaacgggagcatttgccttgacatccttaaggac 1264816
Query: 386 cagtggagccc 396
|| ||||||||
Sbjct: 1264815 caatggagccc 1264805
Score = 42.1 bits (21), Expect = 0.49
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 150 tgcaaaaggaccctccaacatcatgcagtgcaggtcctgct 190
|||| ||||| || || ||||||||||||||||||| ||||
Sbjct: 1267321 tgcagaaggatccccctacatcatgcagtgcaggtcttgct 1267281
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 190 bits (96), Expect = 9e-046
Identities = 135/148 (91%)
Strand = Plus / Plus
Query: 414 aggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgtcc 473
|||| |||||||| |||||||| ||||| ||||| |||||||| ||||||||||||||||
Sbjct: 34460080 aggtcttgctttcgatctgctcgctgctcactgaccccaacccggacgaccctcttgtcc 34460139
Query: 474 ctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagcccgcagct 533
|||||||||| ||||||||||||||||| || || ||||| ||| |||||||||||||||
Sbjct: 34460140 ctgagattgcccacatgtacaagacggaccgtccaaagtatgagacgacagcccgcagct 34460199
Query: 534 ggacccagaagtacgccatgggatgaaa 561
||||||||||||| ||||||||||||||
Sbjct: 34460200 ggacccagaagtatgccatgggatgaaa 34460227
Score = 182 bits (92), Expect = 2e-043
Identities = 122/132 (92%)
Strand = Plus / Plus
Query: 181 aggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatag 240
||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |||||
Sbjct: 34459166 aggtcctgctggtgaggatatgttccattggcaggcaaccattatgggccctccagatag 34459225
Query: 241 tccatatgctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaa 300
||| |||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct: 34459226 tccctatgctggtggtgttttcttggtgaatattcatttccccccggactaccccttcaa 34459285
Query: 301 gcctccaaaggt 312
|||||||||||
Sbjct: 34459286 acctccaaaggt 34459297
Score = 182 bits (92), Expect = 2e-043
Identities = 122/132 (92%)
Strand = Plus / Plus
Query: 181 aggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatag 240
||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |||||
Sbjct: 34442735 aggtcctgctggtgaggatatgttccattggcaggcaaccattatgggccctccagatag 34442794
Query: 241 tccatatgctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaa 300
||| |||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct: 34442795 tccctatgctggtggtgttttcttggtgaatattcatttccccccggactaccccttcaa 34442854
Query: 301 gcctccaaaggt 312
|||||||||||
Sbjct: 34442855 acctccaaaggt 34442866
Score = 161 bits (81), Expect = 8e-037
Identities = 102/109 (93%)
Strand = Plus / Plus
Query: 309 aggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtc 368
|||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 34459580 aggtgtcttttaagacaaaggtcttccatccaaacatcaatagcaatggaagcatatgcc 34459639
Query: 369 ttgacattcttaaggagcagtggagccctgctttgacaatctctaaggt 417
| |||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 34459640 tcgacattcttaaggaacagtggagccctgctttgacaatatctaaggt 34459688
Score = 161 bits (81), Expect = 8e-037
Identities = 102/109 (93%)
Strand = Plus / Plus
Query: 309 aggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtc 368
|||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 34443149 aggtgtcttttaagacaaaggtcttccatccaaacatcaatagcaatggaagcatatgcc 34443208
Query: 369 ttgacattcttaaggagcagtggagccctgctttgacaatctctaaggt 417
| |||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 34443209 tcgacattcttaaggaacagtggagccctgctttgacaatatctaaggt 34443257
Score = 85.7 bits (43), Expect = 4e-014
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 180 caggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgata 239
||||||||| |||||| || |||||||||||||||||||| || |||||||| ||||||
Sbjct: 26467469 caggtcctgttggtgaagacatgttccactggcaggcaacgataatgggtccatctgata 26467410
Query: 240 gtccatatgctggaggtgttttc 262
| ||||||||||| || ||||||
Sbjct: 26467409 gcccatatgctggtggagttttc 26467387
Score = 79.8 bits (40), Expect = 2e-012
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 101 caggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggac 160
|||| |||| ||||||| || || || |||||||||||| |||||||| |||| || ||
Sbjct: 34458486 caggagcttatcatggcgtcgaagcggatcctcaaggaactaaaggacctgcagaaagat 34458545
Query: 161 cctccaacatcatgcagtgcaggt 184
||||||||||||||||||||||||
Sbjct: 34458546 cctccaacatcatgcagtgcaggt 34458569
Score = 79.8 bits (40), Expect = 2e-012
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 101 caggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggac 160
|||| |||| ||||||| || || || |||||||||||| |||||||| |||| || ||
Sbjct: 34442055 caggagcttatcatggcgtcgaagcggatcctcaaggaactaaaggacctgcagaaagat 34442114
Query: 161 cctccaacatcatgcagtgcaggt 184
||||||||||||||||||||||||
Sbjct: 34442115 cctccaacatcatgcagtgcaggt 34442138
Score = 79.8 bits (40), Expect = 2e-012
Identities = 88/104 (84%)
Strand = Plus / Minus
Query: 414 aggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgtcc 473
|||| ||||| || ||||| |||||||| |||||||| ||||| || || ||||| ||||
Sbjct: 26466398 aggtgttgctgtcaatctgttccctgctgactgatccgaaccctgatgatcctctggtcc 26466339
Query: 474 ctgagattgctcacatgtacaagacggatcggcctaagtacgag 517
||||||| || |||||||||||||| ||| ||| |||||||||
Sbjct: 26466338 ctgagatcgcccacatgtacaagacagataggcacaagtacgag 26466295
Score = 61.9 bits (31), Expect = 5e-007
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 326 aaggtcttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggag 385
||||| ||||||||||||||||| || || || ||||| || |||||||| ||||||||
Sbjct: 26466596 aaggttttccatccaaacatcaacagcaacgggagcatttgccttgacatccttaaggac 26466537
Query: 386 cagtggagccc 396
|| ||||||||
Sbjct: 26466536 caatggagccc 26466526
Score = 42.1 bits (21), Expect = 0.49
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 150 tgcaaaaggaccctccaacatcatgcagtgcaggtcctgct 190
|||| ||||| || || ||||||||||||||||||| ||||
Sbjct: 26469042 tgcagaaggatccccctacatcatgcagtgcaggtcttgct 26469002
>dbj|AK058360.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-F04, full
insert sequence
Length = 355
Score = 188 bits (95), Expect = 3e-045
Identities = 134/147 (91%)
Strand = Plus / Plus
Query: 413 aaggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgtc 472
||||| |||||||| |||||||| ||||| ||||| |||||||| |||||||||||||||
Sbjct: 1 aaggtgttgctttcgatctgctcgctgctcactgaccccaacccggacgaccctcttgtc 60
Query: 473 cctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagcccgcagc 532
||||||||||| |||||||||||||||||||| || ||||| ||| ||||||||||| ||
Sbjct: 61 cctgagattgcccacatgtacaagacggatcgtccaaagtatgagacgacagcccgcggc 120
Query: 533 tggacccagaagtacgccatgggatga 559
|||||||||||||| ||||||||||||
Sbjct: 121 tggacccagaagtatgccatgggatga 147
>gb|CF299363.1|CF299363 7LEAF--03-F17.b1 Rice leaf plasmid cDNA library II (7LEAF) Oryza
sativa (japonica cultivar-group) cDNA clone
7LEAF--03-F17, mRNA sequence
Length = 635
Score = 184 bits (93), Expect = 5e-044
Identities = 301/369 (81%), Gaps = 1/369 (0%)
Strand = Plus / Plus
Query: 150 tgcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccact 209
|||| ||||| || || |||||||||||||||||||||| |||||| || ||||||||||
Sbjct: 164 tgcagaaggatccccctacatcatgcagtgcaggtcctgttggtgaagacatgttccact 223
Query: 210 ggcaggcaaccatcatgggtcctcctgatagtccatatgctg-gaggtgttttcttggtg 268
|||||||||| || |||||||| ||||||| |||||||||| | || |||||| | ||
Sbjct: 224 ggcaggcaacgataatgggtccatctgatagcccatatgctgngtggagttttcctagtt 283
Query: 269 aacattcatttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaag 328
| ||| || ||||| || || || |||||||| || || ||||| | ||| || |||
Sbjct: 284 accatccacttccctcctgattatcccttcaaaccacccaaggtggcgtttcgcaccaag 343
Query: 329 gtcttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcag 388
|| ||||||||||||||||| || || || ||||| || |||||||| |||||||| ||
Sbjct: 344 gttttccatccaaacatcaacagcaacgggagcatttgccttgacatccttaaggaccaa 403
Query: 389 tggagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgat 448
|||||||| || | || || || ||||| ||||| || ||||| |||||||| ||||||
Sbjct: 404 tggagcccagcactaaccatttccaaggtgttgctgtcaatctgttccctgctgactgat 463
Query: 449 cccaacccagacgaccctcttgtccctgagattgctcacatgtacaagacggatcggcct 508
|| ||||| || || ||||| ||||||||||| || |||||||||||||| ||| |||
Sbjct: 464 ccgaaccctgatgatcctctggtccctgagatcgcccacatgtacaagacagataggcac 523
Query: 509 aagtacgag 517
|||||||||
Sbjct: 524 aagtacgag 532
>gb|AACV01002583.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002583, whole
genome shotgun sequence
Length = 2794
Score = 182 bits (92), Expect = 2e-043
Identities = 122/132 (92%)
Strand = Plus / Plus
Query: 181 aggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatag 240
||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |||||
Sbjct: 2173 aggtcctgctggtgaggatatgttccattggcaggcaaccattatgggccctccagatag 2232
Query: 241 tccatatgctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaa 300
||| |||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct: 2233 tccctatgctggtggtgttttcttggtgaatattcatttccccccggactaccccttcaa 2292
Query: 301 gcctccaaaggt 312
|||||||||||
Sbjct: 2293 acctccaaaggt 2304
Score = 161 bits (81), Expect = 8e-037
Identities = 102/109 (93%)
Strand = Plus / Plus
Query: 309 aggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtc 368
|||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 2587 aggtgtcttttaagacaaaggtcttccatccaaacatcaatagcaatggaagcatatgcc 2646
Query: 369 ttgacattcttaaggagcagtggagccctgctttgacaatctctaaggt 417
| |||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 2647 tcgacattcttaaggaacagtggagccctgctttgacaatatctaaggt 2695
Score = 79.8 bits (40), Expect = 2e-012
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 101 caggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggac 160
|||| |||| ||||||| || || || |||||||||||| |||||||| |||| || ||
Sbjct: 1493 caggagcttatcatggcgtcgaagcggatcctcaaggaactaaaggacctgcagaaagat 1552
Query: 161 cctccaacatcatgcagtgcaggt 184
||||||||||||||||||||||||
Sbjct: 1553 cctccaacatcatgcagtgcaggt 1576
>gb|CB000215.1|CB000215 S345T_B07 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 544
Score = 178 bits (90), Expect = 3e-042
Identities = 285/350 (81%)
Strand = Plus / Plus
Query: 168 catcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaaccatcatgg 227
||||||||||||||||||||| |||||| || |||| | ||||||||||||| || ||||
Sbjct: 6 catcatgcagtgcaggtcctgttggtgaagacatgtcctactggcaggcaacgataatgg 65
Query: 228 gtcctcctgatagtccatatgctggaggtgttttcttggtgaacattcatttcccgccag 287
|||| ||||||| ||||||||||| || |||||| | || | ||| || ||||| || |
Sbjct: 66 gtccatctgatagcccatatgctggtggagttttcctagttaccatccacttccctcctg 125
Query: 288 actaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaaacatca 347
| || |||||||| || || ||||| | ||| || ||||| ||||||||||||||||
Sbjct: 126 attatcccttcaaaccacccaaggtggcgtttcgcaccaaggttttccatccaaacatca 185
Query: 348 atagtaatggaagcatatgtcttgacattcttaaggagcagtggagccctgctttgacaa 407
| || || || ||||| || |||||||| |||||||| || |||||||| || | || |
Sbjct: 186 acagcaacgggagcatttgccttgacatccttaaggaccaatggagcccagcactaacca 245
Query: 408 tctctaaggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctc 467
| || ||||| ||||| || ||||| |||||||| |||||||| ||||| || || ||||
Sbjct: 246 tttccaaggtgttgctgtcaatctgttccctgctgactgatccgaaccctgatgatcctc 305
Query: 468 ttgtccctgagattgctcacatgtacaagacggatcggcctaagtacgag 517
| ||||||||||| || |||||||||||||| ||| ||| |||||||||
Sbjct: 306 tggtccctgagatcgcccacatgtacaagacagataggcacaagtacgag 355
>gb|CV732417.1|CV732417 FLO--06-O05.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--06-O05,
mRNA sequence
Length = 492
Score = 178 bits (90), Expect = 3e-042
Identities = 279/342 (81%)
Strand = Plus / Plus
Query: 150 tgcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatgttccact 209
|||| ||||| || || |||||||||||||||||||||| |||||| || ||||||||||
Sbjct: 151 tgcagaaggatccccctacatcatgcagtgcaggtcctgttggtgaagacatgttccact 210
Query: 210 ggcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttcttggtga 269
|||||||||| || |||||||| ||||||| ||||||||||| || |||||| | || |
Sbjct: 211 ggcaggcaacgataatgggtccatctgatagcccatatgctggtggagttttcctagtta 270
Query: 270 acattcatttcccgccagactaccccttcaagcctccaaaggtatcttttaagacgaagg 329
||| || ||||| || || || |||||||| || || ||||| | ||| || ||||
Sbjct: 271 ccatccacttccctcctgattatcccttcaaaccacccaaggtggcgtttcgcaccaagg 330
Query: 330 tcttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaaggagcagt 389
| ||||||||||||||||| || || || ||||| || |||||||| |||||||| || |
Sbjct: 331 ttttccatccaaacatcaacagcaacgggagcatttgccttgacatccttaaggaccaat 390
Query: 390 ggagccctgctttgacaatctctaaggttttgctttctatctgctccctgcttactgatc 449
||||||| || | || || || ||||| ||||| || ||||| |||||||| |||||||
Sbjct: 391 ggagcccagcactaaccatttccaaggtgttgctgtcaatctgttccctgctgactgatc 450
Query: 450 ccaacccagacgaccctcttgtccctgagattgctcacatgt 491
| ||||| || || ||||| ||||||||||| || |||||||
Sbjct: 451 cgaaccctgatgatcctctggtccctgagatcgcccacatgt 492
>gb|AACV01026951.1| Oryza sativa (japonica cultivar-group) Ctg026951, whole genome
shotgun sequence
Length = 9608
Score = 174 bits (88), Expect = 5e-041
Identities = 121/132 (91%)
Strand = Plus / Minus
Query: 181 aggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatag 240
||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||
Sbjct: 3116 aggtcctgctggtgaggatatgttccattggcaggcgaccattatgggtcctccagatag 3057
Query: 241 tccatatgctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaa 300
||| |||||||| || |||||||| ||||| ||||||||||| || ||||||||||||||
Sbjct: 3056 tccctatgctggtggagttttcttagtgaatattcatttccccccggactaccccttcaa 2997
Query: 301 gcctccaaaggt 312
||||||||||||
Sbjct: 2996 gcctccaaaggt 2985
Score = 168 bits (85), Expect = 3e-039
Identities = 103/109 (94%)
Strand = Plus / Minus
Query: 309 aggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtc 368
|||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 2512 aggtatctttcaagacaaaggtcttccatccaaacatcaatagcaatggaagcatatgcc 2453
Query: 369 ttgacattcttaaggagcagtggagccctgctttgacaatctctaaggt 417
||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 2452 ttgacattcttaaggagcaatggagccctgctttgacaatttctaaggt 2404
Score = 147 bits (74), Expect = 1e-032
Identities = 132/146 (90%), Gaps = 4/146 (2%)
Strand = Plus / Minus
Query: 414 aggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgtcc 473
|||| |||||||| |||||||| ||||| ||||| ||||||| ||||||||||||||||
Sbjct: 1323 aggtgttgctttcgatctgctcgctgctcactga-cccaaccg-gacgaccctcttgtcc 1266
Query: 474 ctgagattgctcacatgtacaagacggatcggcctaagtacgaggcgacagcccgcagct 533
||||||||| |||||||||||||||||||| || ||||| ||| |||||||||||||||
Sbjct: 1265 -tgagattgc-cacatgtacaagacggatcgtccaaagtatgagacgacagcccgcagct 1208
Query: 534 ggacccagaagtacgccatgggatga 559
||||||||||||| ||||||||||||
Sbjct: 1207 ggacccagaagtatgccatgggatga 1182
Score = 87.7 bits (44), Expect = 9e-015
Identities = 74/84 (88%)
Strand = Plus / Minus
Query: 101 caggggcttgtcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggac 160
||||||| | |||||||||| || || |||||||||||| |||||||| |||| || ||
Sbjct: 3751 caggggcatatcatggcatcgaagcggatcctcaaggaactaaaggacctgcagaaagat 3692
Query: 161 cctccaacatcatgcagtgcaggt 184
||||||||||||||||||||||||
Sbjct: 3691 cctccaacatcatgcagtgcaggt 3668
>ref|NM_192451.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1125
Score = 165 bits (83), Expect = 5e-038
Identities = 272/335 (81%)
Strand = Plus / Plus
Query: 183 gtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcctcctgatagtc 242
|||||| |||||| || |||||||||||||||||||| || |||||||| ||||||| |
Sbjct: 524 gtcctgttggtgaagacatgttccactggcaggcaacgataatgggtccatctgatagcc 583
Query: 243 catatgctggaggtgttttcttggtgaacattcatttcccgccagactaccccttcaagc 302
|||||||||| || |||||| | || | ||| || ||||| || || || |||||||| |
Sbjct: 584 catatgctggtggagttttcctagttaccatccacttccctcctgattatcccttcaaac 643
Query: 303 ctccaaaggtatcttttaagacgaaggtcttccatccaaacatcaatagtaatggaagca 362
| || ||||| | ||| || ||||| ||||||||||||||||| || || || ||||
Sbjct: 644 cacccaaggtggcgtttcgcaccaaggttttccatccaaacatcaacagcaacgggagca 703
Query: 363 tatgtcttgacattcttaaggagcagtggagccctgctttgacaatctctaaggttttgc 422
| || |||||||| |||||||| || |||||||| || | || || || ||||| ||||
Sbjct: 704 tttgccttgacatccttaaggaccaatggagcccagcactaaccatttccaaggtgttgc 763
Query: 423 tttctatctgctccctgcttactgatcccaacccagacgaccctcttgtccctgagattg 482
| || ||||| |||||||| |||||||| ||||| || || ||||| ||||||||||| |
Sbjct: 764 tgtcaatctgttccctgctgactgatccgaaccctgatgatcctctggtccctgagatcg 823
Query: 483 ctcacatgtacaagacggatcggcctaagtacgag 517
| |||||||||||||| ||| ||| |||||||||
Sbjct: 824 cccacatgtacaagacagataggcacaagtacgag 858
>gb|CF316408.1|CF316408 HD--05-L01.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--05-L01, mRNA sequence
Length = 605
Score = 163 bits (82), Expect = 2e-037
Identities = 316/394 (80%)
Strand = Plus / Plus
Query: 112 catggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggaccctccaacatc 171
|||||| ||||| || ||||||||||| | |||||| |||| ||||| || ||||| ||
Sbjct: 33 catggcgtccaagcggatcctcaaggagctcaaggacctgcagaaggatcccccaacctc 92
Query: 172 atgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcc 231
||||| || || |||| || || ||||||||||||||||| || || || ||||||||
Sbjct: 93 ctgcagcgctggccctgtgggagaagatatgttccactggcaagctacgattatgggtcc 152
Query: 232 tcctgatagtccatatgctggaggtgttttcttggtgaacattcatttcccgccagacta 291
| |||||||||||||| || || || |||||||| ||||| ||||| ||||||||
Sbjct: 153 agcagatagtccatatgcaggtggcgtcttcttggtttctattcacttccctccagacta 212
Query: 292 ccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaaacatcaatag 351
|| ||||| || || ||||| | |||||||| ||||| ||||| ||||||||||| ||
Sbjct: 213 tccgttcaaaccgcccaaggttgcatttaagacaaaggttttccacccaaacatcaacag 272
Query: 352 taatggaagcatatgtcttgacattcttaaggagcagtggagccctgctttgacaatctc 411
||| |||||||| || ||||| || || ||||| |||||||||||||| |||||| | ||
Sbjct: 273 taacggaagcatctgccttgatatcctgaaggaacagtggagccctgcattgacagtgtc 332
Query: 412 taaggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgt 471
||||| | || || || || || || || || || || |||||||||||||| || ||
Sbjct: 333 aaaggtactcctctcaatttgttctctactgacggacccaaacccagacgacccgctagt 392
Query: 472 ccctgagattgctcacatgtacaagacggatcgg 505
|| |||||||| |||||||||||||| ||||||
Sbjct: 393 tccggagattgcgcacatgtacaagactgatcgg 426
>gb|CF317764.1|CF317764 HD--07-J05.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-J05, mRNA sequence
Length = 566
Score = 157 bits (79), Expect = 1e-035
Identities = 292/363 (80%)
Strand = Plus / Plus
Query: 143 aaggacttgcaaaaggaccctccaacatcatgcagtgcaggtcctgctggtgaggatatg 202
|||||| |||| ||||| || ||||| || ||||| || || |||| || || ||||||
Sbjct: 69 aaggacctgcagaaggatcccccaacctcctgcagcgctggccctgtgggagaagatatg 128
Query: 203 ttccactggcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgttttc 262
||||||||||| || || || |||||||| | |||||||||||||| || || || |||
Sbjct: 129 ttccactggcaagctacgattatgggtccagcagatagtccatatgcaggtggcgtcttc 188
Query: 263 ttggtgaacattcatttcccgccagactaccccttcaagcctccaaaggtatcttttaag 322
||||| ||||| ||||| |||||||| || ||||| || || ||||| | ||||||
Sbjct: 189 ttggtttctattcacttccctccagactatccgttcaaaccgcccaaggttgcatttaag 248
Query: 323 acgaaggtcttccatccaaacatcaatagtaatggaagcatatgtcttgacattcttaag 382
|| ||||| ||||| ||||||||||| ||||| |||||||| || ||||| || || |||
Sbjct: 249 acaaaggttttccacccaaacatcaacagtaacggaagcatctgccttgatatcctgaag 308
Query: 383 gagcagtggagccctgctttgacaatctctaaggttttgctttctatctgctccctgctt 442
|| |||||||||||||| |||||| | || ||||| | || || || ||||| || ||
Sbjct: 309 gaacagtggagccctgcattgacagtgtcaaaggtactcctctcaatttgctctctactg 368
Query: 443 actgatcccaacccagacgaccctcttgtccctgagattgctcacatgtacaagacggat 502
|| || || |||||||||||||| || || || |||||||| |||||||||||||| |||
Sbjct: 369 acggacccaaacccagacgacccgctagttccggagattgcgcacatgtacaagactgat 428
Query: 503 cgg 505
|||
Sbjct: 429 cgg 431
>gb|CF325772.1|CF325772 JMT1--04-C17.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--04-C17, mRNA sequence
Length = 620
Score = 157 bits (79), Expect = 1e-035
Identities = 316/394 (80%), Gaps = 1/394 (0%)
Strand = Plus / Minus
Query: 113 atggcatccaaacgtatcctcaaggaattaaaggacttgcaaaagga-ccctccaacatc 171
||||| ||||| || ||||||||||| | |||||| |||| ||||| ||| ||||| ||
Sbjct: 620 atggcgtccaagcggatcctcaaggagctcaaggacctgcagaaggatcccnccaacctc 561
Query: 172 atgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcc 231
||||| || || |||| || || ||||||||||||||||| || || || ||||||||
Sbjct: 560 ctgcagcgctggccctgtgggagaagatatgttccactggcaagctacgattatgggtcc 501
Query: 232 tcctgatagtccatatgctggaggtgttttcttggtgaacattcatttcccgccagacta 291
| |||||||||||||| || || || |||||||| ||||| ||||| ||||||||
Sbjct: 500 agcagatagtccatatgcaggtggcgtcttcttggtttctattcacttccctccagacta 441
Query: 292 ccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaaacatcaatag 351
|| ||||| || || ||||| | |||||||| ||||| ||||| ||||||||||| ||
Sbjct: 440 tccgttcaaaccgcccaaggttgcatttaagacaaaggttttccacccaaacatcaacag 381
Query: 352 taatggaagcatatgtcttgacattcttaaggagcagtggagccctgctttgacaatctc 411
||| |||||||| || ||||| || || ||||| |||||||||||||| |||||| | ||
Sbjct: 380 taacggaagcatctgccttgatatcctgaaggaacagtggagccctgcattgacagtgtc 321
Query: 412 taaggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgt 471
||||| | || || || || || || || || || || |||||||||||||| || ||
Sbjct: 320 aaaggtactcctctcaatttgttctctactgacggacccaaacccagacgacccgctagt 261
Query: 472 ccctgagattgctcacatgtacaagacggatcgg 505
|| |||||||| |||||||||||||| ||||||
Sbjct: 260 tccggagattgcgcacatgtacaagactgatcgg 227
>gb|CV725705.1|CV725705 14Salt--02-O18.g1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--02-O18, mRNA sequence
Length = 494
Score = 157 bits (79), Expect = 1e-035
Identities = 269/330 (81%), Gaps = 2/330 (0%)
Strand = Plus / Plus
Query: 168 catcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaaccatcatgg 227
||||||||||||||||||||| |||||| || |||||||||||||||||||| || ||||
Sbjct: 166 catcatgcagtgcaggtcctgttggtgaagacatgttccactggcaggcaacgataatgg 225
Query: 228 gtcctcctgatagtccatatgctgg-aggtgttttcttggtgaacattcatttcccgcca 286
|||| ||||||| ||||||||||| || |||||| | || | ||| || ||||| ||
Sbjct: 226 gtccatctgatagcccatatgctggtnggagttttcctagttaccatccacttccctcct 285
Query: 287 gactaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaaacatc 346
|| || |||||||| || || ||||| | ||| || ||||| |||||||||||||||
Sbjct: 286 gattatcccttcaaaccacccaaggtggcgtttcgcaccaaggttttccatccaaacatc 345
Query: 347 aatagtaatggaagcatatgtcttgacattcttaaggagcagtggagccctgctttgaca 406
|| || || || ||||| || |||||||| |||||||| || ||||| || || | ||
Sbjct: 346 aacagcaacgggagcatttgccttgacatccttaaggaccaatggag-ccagcactaacc 404
Query: 407 atctctaaggttttgctttctatctgctccctgcttactgatcccaacccagacgaccct 466
|| || ||||| ||||| || ||||| |||||||| |||||||| ||||| || || |||
Sbjct: 405 atttccaaggtgttgctgtcaatctgttccctgctgactgatccgaaccctgatgatcct 464
Query: 467 cttgtccctgagattgctcacatgtacaag 496
|| ||||||||||| || ||||||||||||
Sbjct: 465 ctggtccctgagatcgcccacatgtacaag 494
>gb|CF321884.1|CF321884 HD--13-E16.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--13-E16, mRNA sequence
Length = 567
Score = 155 bits (78), Expect = 5e-035
Identities = 315/394 (79%)
Strand = Plus / Plus
Query: 112 catggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggaccctccaacatc 171
|||||| ||||| || ||||||||||| | |||||| |||| ||||| || ||||| ||
Sbjct: 39 catggcgtccaagcggatcctcaaggagctcaaggacctgcagaaggatcccccaacctc 98
Query: 172 atgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaaccatcatgggtcc 231
||||| || || |||| || || ||||||||||||||||| || || || ||||||||
Sbjct: 99 ctgcagcgctggccctgtgggagaagatatgttccactggcaagctacgattatgggtcc 158
Query: 232 tcctgatagtccatatgctggaggtgttttcttggtgaacattcatttcccgccagacta 291
| |||||||||||||| || || || |||||||| ||||| ||||| ||||||||
Sbjct: 159 agcagatagtccatatgcaggtggcgtcttcttggtttctattcacttccctccagacta 218
Query: 292 ccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaaacatcaatag 351
|| ||||| || || ||||| | |||||||| ||||| ||||| || |||||||| ||
Sbjct: 219 tccgttcaaaccgcccaaggttgcatttaagacaaaggttttccacccgaacatcaacag 278
Query: 352 taatggaagcatatgtcttgacattcttaaggagcagtggagccctgctttgacaatctc 411
||| |||||||| || ||||| || || ||||| |||||||||||||| |||||| | ||
Sbjct: 279 taacggaagcatctgccttgatatcctgaaggaacagtggagccctgcattgacagtgtc 338
Query: 412 taaggttttgctttctatctgctccctgcttactgatcccaacccagacgaccctcttgt 471
||||| | || || || || || || || || || || |||||||||||||| || ||
Sbjct: 339 aaaggtactcctctcaatttgttctctactgacggacccaaacccagacgacccgctagt 398
Query: 472 ccctgagattgctcacatgtacaagacggatcgg 505
|| |||||||| |||||||||||||| ||||||
Sbjct: 399 tccggagattgcgcacatgtacaagactgatcgg 432
>dbj|AK100516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100E07, full
insert sequence
Length = 2600
Score = 139 bits (70), Expect = 3e-030
Identities = 97/106 (91%)
Strand = Plus / Plus
Query: 111 tcatggcatccaaacgtatcctcaaggaattaaaggacttgcaaaaggaccctccaacat 170
|||||||||| || || |||||||||||| |||||||| |||| || || ||||||||||
Sbjct: 139 tcatggcatcgaagcggatcctcaaggaactaaaggacctgcagaaagatcctccaacat 198
Query: 171 catgcagtgcaggtcctgctggtgaggatatgttccactggcaggc 216
||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 199 catgcagtgcaggtcctgctggtgaggatatgttccattggcaggc 244
>gb|C26939.1|C26939 C26939 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C50488_1A, mRNA sequence
Length = 449
Score = 129 bits (65), Expect = 3e-027
Identities = 179/217 (82%)
Strand = Plus / Plus
Query: 167 acatcatgcagtgcaggtcctgctggtgaggatatgttccactggcaggcaaccatcatg 226
|||||||||||||||||||||| |||||| || |||||||||||||||||||| || |||
Sbjct: 145 acatcatgcagtgcaggtcctgttggtgaagacatgttccactggcaggcaacgataatg 204
Query: 227 ggtcctcctgatagtccatatgctggaggtgttttcttggtgaacattcatttcccgcca 286
||||| ||||||| ||||||||||| || |||||| | || | ||| || ||||| ||
Sbjct: 205 ggtccatctgatagcccatatgctggtggagttttcctagttaccatccacttccctcct 264
Query: 287 gactaccccttcaagcctccaaaggtatcttttaagacgaaggtcttccatccaaacatc 346
|| || |||||||| || || ||||| | ||| || ||||| |||||||||||||||
Sbjct: 265 gattatcccttcaaaccacccaaggtggcgtttcgcaccaaggttttccatccaaacatc 324
Query: 347 aatagtaatggaagcatatgtcttgacattcttaagg 383
|| || || || ||||| || |||||||| |||||||
Sbjct: 325 aacagcaacgggagcatttgccttgacatccttaagg 361
>gb|CB642753.1|CB642753 OSJNEb03B17.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03B17 5', mRNA sequence
Length = 621
Score = 129 bits (65), Expect = 3e-027
Identities = 245/305 (80%)
Strand = Plus / Plus
Query: 200 atgttccactggcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgtt 259
|||||||||||||| ||||| |||||||| || ||| || || || ||||||| ||
Sbjct: 145 atgttccactggcaagcaacaatcatggggcccaatgacagcccctactctggaggagtg 204
Query: 260 ttcttggtgaacattcatttcccgccagactaccccttcaagcctccaaaggtatctttt 319
||| |||||| ||| || ||||| || |||||||| ||||||||||||||||| | ||
Sbjct: 205 ttcctggtgaccatccacttccctcctgactaccctttcaagcctccaaaggtggcattc 264
Query: 320 aagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtcttgacattctt 379
||||| ||||| |||||||||||||| || || ||||| | ||| || |||||||| ||
Sbjct: 265 aagaccaaggtgttccatccaaacataaacagcaatggcaacatctgccttgacatcctc 324
Query: 380 aaggagcagtggagccctgctttgacaatctctaaggttttgctttctatctgctccctg 439
||||| ||||||||||| ||| | || ||||| |||||| | || || |||||||| |||
Sbjct: 325 aaggaccagtggagcccagctctcaccatctccaaggttcttctgtcgatctgctcgctg 384
Query: 440 cttactgatcccaacccagacgaccctcttgtccctgagattgctcacatgtacaagacg 499
|| || || || ||||| ||||| || || || || ||||| ||||| |||| ||||||
Sbjct: 385 ctgacggacccgaacccggacgatccgctggtgccggagatcgctcatatgtgcaagact 444
Query: 500 gatcg 504
|||||
Sbjct: 445 gatcg 449
>gb|CB642754.1|CB642754 OSJNEb03B17.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03B17 3', mRNA sequence
Length = 791
Score = 129 bits (65), Expect = 3e-027
Identities = 245/305 (80%)
Strand = Plus / Minus
Query: 200 atgttccactggcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgtt 259
|||||||||||||| ||||| |||||||| || ||| || || || ||||||| ||
Sbjct: 616 atgttccactggcaagcaacaatcatggggcccaatgacagcccctactctggaggagtg 557
Query: 260 ttcttggtgaacattcatttcccgccagactaccccttcaagcctccaaaggtatctttt 319
||| |||||| ||| || ||||| || |||||||| ||||||||||||||||| | ||
Sbjct: 556 ttcctggtgaccatccacttccctcctgactaccctttcaagcctccaaaggtggcattc 497
Query: 320 aagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtcttgacattctt 379
||||| ||||| |||||||||||||| || || ||||| | ||| || |||||||| ||
Sbjct: 496 aagaccaaggtgttccatccaaacataaacagcaatggcaacatctgccttgacatcctc 437
Query: 380 aaggagcagtggagccctgctttgacaatctctaaggttttgctttctatctgctccctg 439
||||| ||||||||||| ||| | || ||||| |||||| | || || |||||||| |||
Sbjct: 436 aaggaccagtggagcccagctctcaccatctccaaggttcttctgtcgatctgctcgctg 377
Query: 440 cttactgatcccaacccagacgaccctcttgtccctgagattgctcacatgtacaagacg 499
|| || || || ||||| ||||| || || || || ||||| ||||| |||| ||||||
Sbjct: 376 ctgacggacccgaacccggacgatccgctggtgccggagatcgctcatatgtgcaagact 317
Query: 500 gatcg 504
|||||
Sbjct: 316 gatcg 312
>gb|CF294377.1|CF294377 30DGS--03-O03.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--03-O03, mRNA sequence
Length = 593
Score = 129 bits (65), Expect = 3e-027
Identities = 245/305 (80%)
Strand = Plus / Plus
Query: 200 atgttccactggcaggcaaccatcatgggtcctcctgatagtccatatgctggaggtgtt 259
|||||||||||||| ||||| |||||||| || ||| || || || ||||||| ||
Sbjct: 175 atgttccactggcaagcaacaatcatggggcccaatgacagcccctactctggaggagtg 234
Query: 260 ttcttggtgaacattcatttcccgccagactaccccttcaagcctccaaaggtatctttt 319
||| |||||| ||| || ||||| || |||||||| ||||||||||||||||| | ||
Sbjct: 235 ttcctggtgaccatccacttccctcctgactaccctttcaagcctccaaaggtggcattc 294
Query: 320 aagacgaaggtcttccatccaaacatcaatagtaatggaagcatatgtcttgacattctt 379
||||| ||||| |||||||||||||| || || ||||| | ||| || |||||||| ||
Sbjct: 295 aagaccaaggtgttccatccaaacataaacagcaatggcaacatctgccttgacatcctc 354
Query: 380 aaggagcagtggagccctgctttgacaatctctaaggttttgctttctatctgctccctg 439
||||| ||||||||||| ||| | || ||||| |||||| | || || |||||||| |||
Sbjct: 355 aaggaccagtggagcccagctctcaccatctccaaggttcttctgtcgatctgctcgctg 414
Query: 440 cttactgatcccaacccagacgaccctcttgtccctgagattgctcacatgtacaagacg 499
|| || || || ||||| ||||| || || || || ||||| ||||| |||| ||||||
Sbjct: 415 ctgacggacccgaacccggacgatccgctggtgccggagatcgctcatatgtgcaagact 474
Query: 500 gatcg 504
|||||
Sbjct: 475 gatcg 479
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,066,990
Number of Sequences: 438736
Number of extensions: 1066990
Number of successful extensions: 8583
Number of sequences better than 0.5: 347
Number of HSP's better than 0.5 without gapping: 353
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 7199
Number of HSP's gapped (non-prelim): 1093
length of query: 868
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 847
effective length of database: 2,791,206,460
effective search space: 2364151871620
effective search space used: 2364151871620
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)