BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.707
(919 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB645303.1|CB645303 OSJNEb06O08.f OSJNEb Oryza sativa (j... 448 e-123
gb|CF277731.1|CF277731 14ETL--03-G03.b1 Rice etiolated leaf... 448 e-123
ref|XM_468444.1| Oryza sativa (japonica cultivar-group), mRNA 448 e-123
dbj|AK119884.1| Oryza sativa (japonica cultivar-group) cDNA... 446 e-122
gb|CF323690.1|CF323690 HDN--04-I06.g1 OsHDAC1-overexpressin... 442 e-121
gb|AU093169.1|AU093169 AU093169 Rice callus Oryza sativa (j... 440 e-121
gb|CF305536.1|CF305536 CLD1--01-P21.b1 Rice cold treated le... 438 e-120
gb|CF331203.1|CF331203 NACL--07-D18.b1 Rice callus plasmid ... 432 e-118
gb|CF291267.1|CF291267 14ROOT--01-K01.g1 Rice root plasmid ... 426 e-117
ref|XM_475816.1| Oryza sativa (japonica cultivar-group), p... 422 e-115
gb|CV731758.1|CV731758 FLO--05-O21.b1 Rice flower lambda ph... 418 e-114
gb|CV733744.1|CV733744 FLO--08-M18.b1 Rice flower lambda ph... 418 e-114
gb|CV729101.1|CV729101 FLO--01-M08.b1 Rice flower lambda ph... 416 e-114
gb|CB645304.1|CB645304 OSJNEb06O08.r OSJNEb Oryza sativa (j... 408 e-111
gb|CF300693.1|CF300693 7LEAF--05-E08.g1 Rice leaf plasmid c... 400 e-109
gb|CF313982.1|CF313982 HD--02-F08.b1 OsHDAC1-overexpressing... 396 e-108
gb|CV730451.1|CV730451 FLO--03-P24.b1 Rice flower lambda ph... 391 e-106
gb|CV732963.1|CV732963 FLO--07-K20.g1 Rice flower lambda ph... 391 e-106
gb|AU092722.1|AU092722 AU092722 Rice callus Oryza sativa (j... 387 e-105
gb|CF331204.1|CF331204 NACL--07-D18.g1 Rice callus plasmid ... 369 2e-099
gb|AU077730.1|AU077730 AU077730 Rice cDNA from immature lea... 335 3e-089
gb|CB682632.1|CB682632 OSJNEf10C22.f OSJNEf Oryza sativa (j... 335 3e-089
gb|AU089680.1|AU089680 AU089680 Rice callus Oryza sativa (j... 333 1e-088
gb|CV733745.1|CV733745 FLO--08-M18.g1 Rice flower lambda ph... 333 1e-088
gb|AU057623.1|AU057623 AU057623 Oryza sativa mature leaf Ni... 325 2e-086
gb|AU057622.1|AU057622 AU057622 Oryza sativa mature leaf Ni... 321 4e-085
dbj|AK062099.1| Oryza sativa (japonica cultivar-group) cDNA... 309 1e-081
gb|AU077731.1|AU077731 AU077731 Rice cDNA from immature lea... 303 9e-080
dbj|AK066599.1| Oryza sativa (japonica cultivar-group) cDNA... 303 9e-080
gb|CF300692.1|CF300692 7LEAF--05-E08.b1 Rice leaf plasmid c... 299 1e-078
ref|NM_191653.1| Oryza sativa (japonica cultivar-group), p... 291 3e-076
gb|C27746.1|C27746 C27746 Rice callus cDNA Oryza sativa (ja... 285 2e-074
gb|CF330253.1|CF330253 NACL--05-O09.b1 Rice callus plasmid ... 276 2e-071
gb|AU031211.1|AU031211 AU031211 Rice cDNA from immature lea... 274 8e-071
gb|D23418.1|D23418 RICC2782A Rice callus Oryza sativa (japo... 266 2e-068
gb|CF280323.1|CF280323 14ETL--06-P03.g1 Rice etiolated leaf... 264 8e-068
gb|D23397.1|D23397 RICC2751A Rice callus Oryza sativa (japo... 260 1e-066
gb|D23395.1|D23395 RICC2748A Rice callus Oryza sativa (japo... 258 5e-066
gb|C27632.1|C27632 C27632 Rice callus cDNA Oryza sativa (ja... 250 1e-063
gb|C27786.1|C27786 C27786 Rice callus cDNA Oryza sativa (ja... 232 3e-058
gb|D22671.1|D22671 RICC0835A Rice callus Oryza sativa (japo... 230 1e-057
gb|CB000090.1|CB000090 S345W_C05 Rice cold stress germinati... 226 2e-056
gb|CB682633.1|CB682633 OSJNEf10C22.r OSJNEf Oryza sativa (j... 226 2e-056
gb|AU063118.1|AU063118 AU063118 Rice callus Oryza sativa (j... 224 7e-056
gb|CF277732.1|CF277732 14ETL--03-G03.g1 Rice etiolated leaf... 218 4e-054
gb|AU065482.2|AU065482 AU065482 Rice callus Oryza sativa (j... 212 3e-052
gb|CX728936.1|CX728936 OSJNEf16H22.r OSJNEf Oryza sativa (j... 196 1e-047
gb|D15263.1|D15263 RICC0376A Rice callus Oryza sativa (japo... 190 9e-046
dbj|AP004878.3| Oryza sativa (japonica cultivar-group) geno... 184 6e-044
gb|AACV01005659.1| Oryza sativa (japonica cultivar-group) c... 184 6e-044
ref|NT_107182.1| Oryza sativa (japonica cultivar-group) 184 6e-044
dbj|AP004020.3| Oryza sativa (japonica cultivar-group) geno... 184 6e-044
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 184 6e-044
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 184 6e-044
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 184 6e-044
gb|AU058323.1|AU058323 AU058323 Oryza sativa Nipponbare imm... 176 1e-041
gb|AACV01012641.1| Oryza sativa (japonica cultivar-group) c... 161 8e-037
ref|NT_107219.1| Oryza sativa (japonica cultivar-group) 161 8e-037
gb|AC104713.3| Oryza sativa (japonica cultivar-group) chrom... 161 8e-037
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 161 8e-037
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 161 8e-037
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 161 8e-037
gb|AU166184.1|AU166184 AU166184 Rice immature leaf includin... 159 3e-036
gb|C20274.1|C20274 C20274 Rice panicle at ripening stage Or... 155 5e-035
gb|AU031212.1|AU031212 AU031212 Rice cDNA from immature lea... 153 2e-034
gb|AACV01012640.1| Oryza sativa (japonica cultivar-group) c... 153 2e-034
gb|CF330254.1|CF330254 NACL--05-O09.g1 Rice callus plasmid ... 145 5e-032
gb|AACV01002189.1| Oryza sativa (japonica cultivar-group) c... 121 7e-025
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 121 7e-025
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 121 7e-025
dbj|AP003381.3| Oryza sativa (japonica cultivar-group) geno... 121 7e-025
dbj|AP003273.3| Oryza sativa (japonica cultivar-group) geno... 121 7e-025
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 121 7e-025
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 121 7e-025
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 121 7e-025
gb|CF328967.1|CF328967 NACL--04-B20.b1 Rice callus plasmid ... 117 1e-023
gb|CF328968.1|CF328968 NACL--04-B20.g1 Rice callus plasmid ... 115 4e-023
gb|AQ291910.1|AQ291910 nbxb0040I16r CUGI Rice BAC Library O... 107 1e-020
gb|AU082911.1|AU082911 AU082911 Rice callus Oryza sativa (j... 101 7e-019
dbj|AG022146.2| Oryza sativa (japonica cultivar-group) DNA,... 100 3e-018
gb|CF333994.1|CF333994 JMT--03-B23.b1 AtJMT-overexpressing ... 92 6e-016
gb|CF333995.1|CF333995 JMT--03-B23.g1 AtJMT-overexpressing ... 92 6e-016
gb|DU168437.1|DU168437 UCDRGT3451_5.1 UCD RGT Rice Insertio... 72 6e-010
gb|CB685776.1|CB685776 OSJNEf16H22.f OSJNEf Oryza sativa (j... 58 9e-006
gb|CV721002.1|CV721002 YBH--02-I24.b1 Rice before heading y... 56 3e-005
gb|AU312125.1|AU312125 AU312125 Oryza sativa anther cDNA Or... 46 0.034
>gb|CB645303.1|CB645303 OSJNEb06O08.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb06O08 5', mRNA sequence
Length = 570
Score = 448 bits (226), Expect = e-123
Identities = 360/404 (89%), Gaps = 3/404 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
|||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||||
Sbjct: 501 ctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgagct 442
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 aagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctggtt 382
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 cttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtggtagagctt 322
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttgc 628
|| || || |||||||||||||||||||| || |||||||||||||||| ||||||| |
Sbjct: 321 agctggggcattctgcttcttggtcttggtcgtggagaggaccacagccgcgtcctttcc 262
Query: 629 a---gctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
| | ||||||||||||||| ||||||||||||||||| || ||||| ||| |||||||
Sbjct: 261 acctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtg 202
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
| ||||| |||||||| ||||||||||||||||||||||||||||||| ||| || ||
Sbjct: 201 aacattgtacaggttgttgggctccttggtgaactgcaccttggcattgctgtttccaaa 142
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccaga 789
||||||||| |||||| ||||||||||| |||||| || |||||
Sbjct: 141 ctgcttcacgaggaagcagttgttcttcttcacaatctcccaga 98
>gb|CF277731.1|CF277731 14ETL--03-G03.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--03-G03, mRNA sequence
Length = 676
Score = 448 bits (226), Expect = e-123
Identities = 360/404 (89%), Gaps = 3/404 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
|||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||||
Sbjct: 511 ctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgagct 452
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 451 aagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctggtt 392
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 391 cttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtggtagagctt 332
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttgc 628
|| || || |||||||||||||||||||| || |||||||||||||||| ||||||| |
Sbjct: 331 agctggggcattctgcttcttggtcttggtcgtggagaggaccacagccgcgtcctttcc 272
Query: 629 a---gctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
| | ||||||||||||||| ||||||||||||||||| || ||||| ||| |||||||
Sbjct: 271 acctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtg 212
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
| ||||| |||||||| ||||||||||||||||||||||||||||||| ||| || ||
Sbjct: 211 aacattgtacaggttgttgggctccttggtgaactgcaccttggcattgctgtttccaaa 152
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccaga 789
||||||||| |||||| ||||||||||| |||||| || |||||
Sbjct: 151 ctgcttcacgaggaagcagttgttcttcttcacaatctcccaga 108
>ref|XM_468444.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 444
Score = 448 bits (226), Expect = e-123
Identities = 360/404 (89%), Gaps = 3/404 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
|||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||||
Sbjct: 429 ctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgagct 370
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 369 aagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctggtt 310
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 309 cttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtggtagagctt 250
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttgc 628
|| || || |||||||||||||||||||| || |||||||||||||||| ||||||| |
Sbjct: 249 agctggggcattctgcttcttggtcttggtcgtggagaggaccacagccgcgtcctttcc 190
Query: 629 a---gctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
| | ||||||||||||||| ||||||||||||||||| || ||||| ||| |||||||
Sbjct: 189 acctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtg 130
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
| ||||| |||||||| ||||||||||||||||||||||||||||||| ||| || ||
Sbjct: 129 aacattgtacaggttgttgggctccttggtgaactgcaccttggcattgctgtttccaaa 70
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccaga 789
||||||||| |||||| ||||||||||| |||||| || |||||
Sbjct: 69 ctgcttcacgaggaagcagttgttcttcttcacaatctcccaga 26
>dbj|AK119884.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-G12, full
insert sequence
Length = 2472
Score = 446 bits (225), Expect = e-122
Identities = 411/471 (87%), Gaps = 4/471 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||| |||||
Sbjct: 2239 ctgcctgttcttcttcttggcaccagacttggaaacctggaggctgcggtacactgagct 2180
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 2179 aagcctcgcaagagccggcttggtcaggtcaggcctgtagtagttgtcactcacctggtt 2120
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2119 cttgacagccttagccattttgcggaactccttgcgcatcacagacttgtggtagagctt 2060
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt--- 625
||| || || |||||||||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 2059 cgctggggcattctgcttcttggtcttggttgtggagaggaccacggccgcgtccttcac 2000
Query: 626 tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
| | ||||||||||||||| ||||||||||||||||| || ||||| ||| |||||||
Sbjct: 1999 gcctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtg 1940
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| ||||| |||||||| ||||||||||||||||||||||||||||||| || |||||
Sbjct: 1939 gacattgtacaggttgttgggctccttggtgaactgcaccttggcattgctattcccgaa 1880
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
||||||||| |||||| ||||||||||| | |||| || |||||||| | | | |||||
Sbjct: 1879 ctgcttcaccaggaagcagttgttcttcttgacaatctcccagatcaaaggctccggaac 1820
Query: 806 ggttgccatttcccttcgccggagaaga-ggtgccgcggcgtcgcctcgct 855
|| |||||||| ||||||||||||||| || || |||||| |||||||||
Sbjct: 1819 cgtcgccatttcgcttcgccggagaagatggggctgcggcgccgcctcgct 1769
>gb|CF323690.1|CF323690 HDN--04-I06.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--04-I06, mRNA sequence
Length = 500
Score = 442 bits (223), Expect = e-121
Identities = 348/389 (89%), Gaps = 3/389 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
|||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||||
Sbjct: 395 ctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgagct 336
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 335 aagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctggtt 276
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 275 cttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtggtagagctt 216
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttgc 628
|| || || |||||||||||||||||||| || |||||||||||||||| ||||||| |
Sbjct: 215 agctggggcattctgcttcttggtcttggtcgtggagaggaccacagccgcgtcctttcc 156
Query: 629 a---gctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
| | ||||||||||||||| ||||||||||||||||| || ||||| ||| |||||||
Sbjct: 155 acctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtg 96
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
| ||||| |||||||| ||||||||||||||||||||||||||||||| ||| || ||
Sbjct: 95 aacattgtacaggttgttgggctccttggtgaactgcaccttggcattgctgtttccaaa 36
Query: 746 ctgcttcacaaggaaggagttgttcttcc 774
||||||||| |||||| ||||||||||||
Sbjct: 35 ctgcttcacgaggaagcagttgttcttcc 7
>gb|AU093169.1|AU093169 AU093169 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C0376, mRNA sequence
Length = 642
Score = 440 bits (222), Expect = e-121
Identities = 392/448 (87%), Gaps = 3/448 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||| |||||
Sbjct: 494 ctgcctgttcttcttcttggcaccagacttggaaacctggaggctgcggtacactgagct 435
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 434 aagcctcgcaagagccggcttggtcaggtcaggcctgtagtagttgtcactcacctggtt 375
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 374 cttgacagccttagccattttgcggaactccttgcgcatcacagacttgtggtagagctt 315
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt--- 625
||| || || |||||||||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 314 cgctggggcattctgcttcttggtcttggttgtggagaggaccacggccgcgtccttcac 255
Query: 626 tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
| | ||||||||||||||| ||||||||||||||||| || ||||| ||| |||||||
Sbjct: 254 gcctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtg 195
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| ||||| |||||||| ||||||||||||||||||||||||||||||| || |||||
Sbjct: 194 gacattgtacaggttgttgggctccttggtgaactgcaccttggcattgctattcccgaa 135
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
||||||||| |||||| ||||||||||| | |||| || |||||||| | | | |||||
Sbjct: 134 ctgcttcaccaggaagcagttgttcttcttgacaatctcccagatcaaaggctccggaac 75
Query: 806 ggttgccatttcccttcgccggagaaga 833
|| |||||||| |||||||||||||||
Sbjct: 74 cgtcgccatttcgcttcgccggagaaga 47
>gb|CF305536.1|CF305536 CLD1--01-P21.b1 Rice cold treated leaf plasmid cDNA library (CLD1)
Oryza sativa (japonica cultivar-group) cDNA clone
CLD1--01-P21, mRNA sequence
Length = 691
Score = 438 bits (221), Expect = e-120
Identities = 410/471 (87%), Gaps = 4/471 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||| |||||
Sbjct: 507 ctgcctgttcttcttcttggcaccagacttggaaacctggaggctgcggtacactgagct 448
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 447 aagcctcgcaagagccggcttggtcaggtcaggcctgtagtagttgtcactcacctggtt 388
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||| ||||| ||||||||||||||||||||||||||||||||| |||| |
Sbjct: 387 cttgacagccttagccattttgcggaactccttgcgcatcacagacttgtggtagagcgt 328
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt--- 625
||| || || |||||||||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 327 cgctggggcattctgcttcttggtcttggttgtggagaggaccacggccgcgtccttcac 268
Query: 626 tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
| | ||||||||||||||| ||||||||||||||||| || ||||| ||| |||||||
Sbjct: 267 gcctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtg 208
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| ||||| |||||||| ||||||||||||||||||||||||||||||| || |||||
Sbjct: 207 gacattgtacaggttgttgggctccttggtgaactgcaccttggcattgctattcccgaa 148
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaac 805
||||||||| |||||| ||||||||||| | |||| || |||||||| | | | |||||
Sbjct: 147 ctgcttcaccaggaagcagttgttcttcttgacaatctcccagatcaaaggctccggaac 88
Query: 806 ggttgccatttcccttcgccggagaaga-ggtgccgcggcgtcgcctcgct 855
|| |||||||| ||||||||||||||| || || |||||| |||||||||
Sbjct: 87 cgtcgccatttcgcttcgccggagaagatggggctgcggcgccgcctcgct 37
>gb|CF331203.1|CF331203 NACL--07-D18.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--07-D18, mRNA sequence
Length = 608
Score = 432 bits (218), Expect = e-118
Identities = 358/404 (88%), Gaps = 3/404 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
|||||||||||||||||| ||||| ||||||||||||||||||| | ||||||| |||||
Sbjct: 504 ctgcctgttcttcttcttcacaccagacttggcaacctggaggccgcggtacactgagct 445
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 444 aagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctggtt 385
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 384 cttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtggtagagctt 325
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttgc 628
|| || || |||||||||||||||| ||| || |||||||||||||||| ||||||| |
Sbjct: 324 agctggggcattctgcttcttggtctgggtcgtggagaggaccacagccgcgtcctttcc 265
Query: 629 a---gctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
| | ||||||||||||||| ||||||||||||||||| || ||||| ||| |||||||
Sbjct: 264 acctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtg 205
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
| ||||| |||||||| ||||||||||||||||||||||||||||||| ||| || ||
Sbjct: 204 aacattgtacaggttgttgggctccttggtgaactgcaccttggcattgctgtttccaaa 145
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccaga 789
||||||||| |||||| ||||||||||| |||||| || |||||
Sbjct: 144 ctgcttcacgaggaagcagttgttcttcttcacaatctcccaga 101
>gb|CF291267.1|CF291267 14ROOT--01-K01.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-K01, mRNA sequence
Length = 514
Score = 426 bits (215), Expect = e-117
Identities = 343/385 (89%), Gaps = 3/385 (0%)
Strand = Plus / Minus
Query: 408 acaccggacttggcaacctggaggctgaggtacaccgagctcagcctagcaagagctggc 467
||||| ||||||||||||||||||||| ||||||| ||||| ||||| |||||||| |||
Sbjct: 510 acaccagacttggcaacctggaggctgcggtacactgagctaagccttgcaagagccggc 451
Query: 468 ttggtcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatc 527
||||||||||| ||||||||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 450 ttggtcagatctggcctgtagtagttgtcactaacctggttcttgacagccttagccatc 391
Query: 528 ttgcggaactccttgcgcatcacagacttgtggctgagcttcgcaggtgcgttctgcttc 587
||||||||||||||||||||||||||||||||| |||||| || || || |||||||||
Sbjct: 390 ttgcggaactccttgcgcatcacagacttgtggtagagcttagctggggcattctgcttc 331
Query: 588 ttggtcttggtagtagagaggaccacagccgagtcctttgca---gctggctggatcgtc 644
||||||||||| || |||||||||||||||| ||||||| || | |||||||||||||
Sbjct: 330 ttggtcttggtcgtggagaggaccacagccgcgtcctttccacctgatggctggatcgtc 271
Query: 645 acagtcttcttgttcgccaaacccgagtgtttgaaggagtggatgttgtagaggttgttc 704
|| ||||||||||||||||| || ||||| ||| ||||||| | ||||| ||||||||
Sbjct: 270 acggtcttcttgttcgccaagccagagtgcttgtaggagtgaacattgtacaggttgttg 211
Query: 705 ggctccttggtgaactgcaccttggcattgccgttgccgaactgcttcacaaggaaggag 764
||||||||||||||||||||||||||||||| ||| || ||||||||||| |||||| ||
Sbjct: 210 ggctccttggtgaactgcaccttggcattgctgtttccaaactgcttcacgaggaagcag 151
Query: 765 ttgttcttcctcacaacctgccaga 789
||||||||| |||||| || |||||
Sbjct: 150 ttgttcttcttcacaatctcccaga 126
>ref|XM_475816.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 444
Score = 422 bits (213), Expect = e-115
Identities = 359/407 (88%), Gaps = 3/407 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||| |||||
Sbjct: 429 ctgcctgttcttcttcttggcaccagacttggaaacctggaggctgcggtacactgagct 370
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 369 aagcctcgcaagagccggcttggtcaggtcaggcctgtagtagttgtcactcacctggtt 310
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 309 cttgacagccttagccattttgcggaactccttgcgcatcacagacttgtggtagagctt 250
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt--- 625
||| || || |||||||||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 249 cgctggggcattctgcttcttggtcttggttgtggagaggaccacggccgcgtccttcac 190
Query: 626 tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
| | ||||||||||||||| ||||||||||||||||| || ||||| ||| |||||||
Sbjct: 189 gcctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtg 130
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| ||||| |||||||| ||||||||||||||||||||||||||||||| || |||||
Sbjct: 129 gacattgtacaggttgttgggctccttggtgaactgcaccttggcattgctattcccgaa 70
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatca 792
||||||||| |||||| ||||||||||| | |||| || ||||||||
Sbjct: 69 ctgcttcaccaggaagcagttgttcttcttgacaatctcccagatca 23
>gb|CV731758.1|CV731758 FLO--05-O21.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--05-O21,
mRNA sequence
Length = 531
Score = 418 bits (211), Expect = e-114
Identities = 397/457 (86%), Gaps = 4/457 (0%)
Strand = Plus / Minus
Query: 403 tcttgacaccggacttggcaacctggaggctgaggtacaccgagctcagcctagcaagag 462
||||| |||| ||||||| ||||||||||||| ||||||| ||||| ||||| |||||||
Sbjct: 531 tcttggcaccagacttggaaacctggaggctgcggtacactgagctaagcctcgcaagag 472
Query: 463 ctggcttggtcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttgg 522
| ||||||||||| ||||||||||||||||||||||| |||||||| || |||||||| |
Sbjct: 471 ccggcttggtcaggtcaggcctgtagtagttgtcactcacctggttcttgacagccttag 412
Query: 523 ccatcttgcggaactccttgcgcatcacagacttgtggctgagcttcgcaggtgcgttct 582
|||| ||||||||||||||||||||||||||||||||| ||||||||| || || ||||
Sbjct: 411 ccattttgcggaactccttgcgcatcacagacttgtggtagagcttcgctggggcattct 352
Query: 583 gcttcttggtcttggtagtagagaggaccacagccgagtcctt---tgcagctggctgga 639
|||||||||||||||| || ||||||||||| |||| |||||| | | ||||||||
Sbjct: 351 gcttcttggtcttggttgtggagaggaccacggccgcgtccttcacgcctgatggctgga 292
Query: 640 tcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtggatgttgtagaggt 699
||||||| ||||||||||||||||| || ||||| ||| ||||||||| ||||| ||||
Sbjct: 291 tcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtacaggt 232
Query: 700 tgttcggctccttggtgaactgcaccttggcattgccgttgccgaactgcttcacaagga 759
|||| ||||||||||||||||||||||||||||||| || |||||||||||||| ||||
Sbjct: 231 tgttgggctccttggtgaactgcaccttggcattgctattcccgaactgcttcaccagga 172
Query: 760 aggagttgttcttcctcacaacctgccagatcagatcccctggaacggttgccatttccc 819
|| ||||||||||| | |||| || |||||||| | | | ||||| || |||||||| |
Sbjct: 171 agcagttgttcttcttgacaatctcccagatcaaaggctccggaaccgtcgccatttcgc 112
Query: 820 ttcgccggagaaga-ggtgccgcggcgtcgcctcgct 855
|||||||||||||| || || |||||| |||||||||
Sbjct: 111 ttcgccggagaagatggggctgcggcgccgcctcgct 75
>gb|CV733744.1|CV733744 FLO--08-M18.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--08-M18,
mRNA sequence
Length = 548
Score = 418 bits (211), Expect = e-114
Identities = 397/457 (86%), Gaps = 4/457 (0%)
Strand = Plus / Minus
Query: 403 tcttgacaccggacttggcaacctggaggctgaggtacaccgagctcagcctagcaagag 462
||||| |||| ||||||| ||||||||||||| ||||||| ||||| ||||| |||||||
Sbjct: 548 tcttggcaccagacttggaaacctggaggctgcggtacactgagctaagcctcgcaagag 489
Query: 463 ctggcttggtcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttgg 522
| ||||||||||| ||||||||||||||||||||||| |||||||| || |||||||| |
Sbjct: 488 ccggcttggtcaggtcaggcctgtagtagttgtcactcacctggttcttgacagccttag 429
Query: 523 ccatcttgcggaactccttgcgcatcacagacttgtggctgagcttcgcaggtgcgttct 582
|||| ||||||||||||||||||||||||||||||||| ||||||||| || || ||||
Sbjct: 428 ccattttgcggaactccttgcgcatcacagacttgtggtagagcttcgctggggcattct 369
Query: 583 gcttcttggtcttggtagtagagaggaccacagccgagtcctt---tgcagctggctgga 639
|||||||||||||||| || ||||||||||| |||| |||||| | | ||||||||
Sbjct: 368 gcttcttggtcttggttgtggagaggaccacggccgcgtccttcacgcctgatggctgga 309
Query: 640 tcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtggatgttgtagaggt 699
||||||| ||||||||||||||||| || ||||| ||| ||||||||| ||||| ||||
Sbjct: 308 tcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtacaggt 249
Query: 700 tgttcggctccttggtgaactgcaccttggcattgccgttgccgaactgcttcacaagga 759
|||| ||||||||||||||||||||||||||||||| || |||||||||||||| ||||
Sbjct: 248 tgttgggctccttggtgaactgcaccttggcattgctattcccgaactgcttcaccagga 189
Query: 760 aggagttgttcttcctcacaacctgccagatcagatcccctggaacggttgccatttccc 819
|| ||||||||||| | |||| || |||||||| | | | ||||| || |||||||| |
Sbjct: 188 agcagttgttcttcttgacaatctcccagatcaaaggctccggaaccgtcgccatttcgc 129
Query: 820 ttcgccggagaaga-ggtgccgcggcgtcgcctcgct 855
|||||||||||||| || || |||||| |||||||||
Sbjct: 128 ttcgccggagaagatggggctgcggcgccgcctcgct 92
>gb|CV729101.1|CV729101 FLO--01-M08.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--01-M08,
mRNA sequence
Length = 494
Score = 416 bits (210), Expect = e-114
Identities = 399/460 (86%), Gaps = 4/460 (0%)
Strand = Plus / Minus
Query: 400 tcttcttgacaccggacttggcaacctggaggctgaggtacaccgagctcagcctagcaa 459
|||||||| |||| ||||||| ||||||||||||| ||||||| ||||| ||||| ||||
Sbjct: 494 tcttcttggcaccagacttggaaacctggaggctgcggtacactgagctaagcctcgcaa 435
Query: 460 gagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtttttcacagcct 519
|||| ||||||||||| ||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 434 gagccggcttggtcaggtcaggcctgtagtagttgtcactcacctggttcttgacagcct 375
Query: 520 tggccatcttgcggaactccttgcgcatcacagacttgtggctgagcttcgcaggtgcgt 579
| ||||| ||||||||||||||||||||||||||||||||| ||||||||| || || |
Sbjct: 374 tagccattttgcggaactccttgcgcatcacagacttgtggtagagcttcgctggggcat 315
Query: 580 tctgcttcttggtcttggtagtagagaggaccacagccgagtcctt---tgcagctggct 636
||||||||||||||||||| || ||||||||||| |||| |||||| | | |||||
Sbjct: 314 tctgcttcttggtcttggttgtggagaggaccacggccgcgtccttcacgcctgatggct 255
Query: 637 ggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtggatgttgtaga 696
|||||||||| ||||||||||||||||| || ||||| ||| ||||||||| ||||| |
Sbjct: 254 ggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtaca 195
Query: 697 ggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaactgcttcacaa 756
||||||| ||||||||||||||||||||||||||||||| || |||||||||||||| |
Sbjct: 194 ggttgttgggctccttggtgaactgcaccttggcattgctattcccgaactgcttcacca 135
Query: 757 ggaaggagttgttcttcctcacaacctgccagatcagatcccctggaacggttgccattt 816
||||| ||||||||||| | |||| || |||||||| | | | ||||| | |||||||
Sbjct: 134 ggaagcagttgttcttcttgacaatctcccagatcaaaggctccggaaccgccgccattt 75
Query: 817 cccttcgccggagaaga-ggtgccgcggcgtcgcctcgct 855
| ||||||||||||||| || || |||||| |||||||||
Sbjct: 74 cgcttcgccggagaagatggggctgcggcgccgcctcgct 35
>gb|CB645304.1|CB645304 OSJNEb06O08.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb06O08 3', mRNA sequence
Length = 758
Score = 408 bits (206), Expect = e-111
Identities = 325/364 (89%), Gaps = 3/364 (0%)
Strand = Plus / Plus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
|||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||||
Sbjct: 395 ctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgagct 454
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 455 aagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctggtt 514
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 515 cttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtggtagagctt 574
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttgc 628
|| || || |||||||||||||||||||| || |||||||||||||||| ||||||| |
Sbjct: 575 agctggggcattctgcttcttggtcttggtcgtggagaggaccacagccgcgtcctttcc 634
Query: 629 a---gctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
| | ||||||||||||||| ||||||||||||||||| || ||||| ||| |||||||
Sbjct: 635 acctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtg 694
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
| ||||| |||||||| ||||||||||||||||||||||||||||||| ||| || ||
Sbjct: 695 aacattgtacaggttgttgggctccttggtgaactgcaccttggcattgctgtttccaaa 754
Query: 746 ctgc 749
||||
Sbjct: 755 ctgc 758
>gb|CF300693.1|CF300693 7LEAF--05-E08.g1 Rice leaf plasmid cDNA library II (7LEAF) Oryza
sativa (japonica cultivar-group) cDNA clone
7LEAF--05-E08, mRNA sequence
Length = 505
Score = 400 bits (202), Expect = e-109
Identities = 390/451 (86%), Gaps = 4/451 (0%)
Strand = Plus / Minus
Query: 409 caccggacttggcaacctggaggctgaggtacaccgagctcagcctagcaagagctggct 468
|||| ||||||| ||||||||||||| ||||||| ||||| ||||| |||||||| ||||
Sbjct: 504 caccagacttggaaacctggaggctgcggtacactgagctaagcctcgcaagagccggct 445
Query: 469 tggtcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatct 528
||||||| ||||||||||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 444 tggtcaggtcaggcctgtagtagttgtcactcacctggttcttgacagccttagccattn 385
Query: 529 tgcggaactccttgcgcatcacagacttgtggctgagcttcgcaggtgcgttctgcttct 588
|||||||||||||||||||||||||||||||| ||||||||| || || ||||||||||
Sbjct: 384 tgcggaactccttgcgcatcacagacttgtggtagagcttcgctggggcattctgcttct 325
Query: 589 tggtcttggtagtagagaggaccacagccgagtcctt---tgcagctggctggatcgtca 645
|||||||||| || ||||||||||| |||| |||||| | | ||||||||||||||
Sbjct: 324 tggtcttggttgtggagaggaccacggccgcgtccttcacgcctgatggctggatcgtca 265
Query: 646 cagtcttcttgttcgccaaacccgagtgtttgaaggagtggatgttgtagaggttgttcg 705
| ||||||||||||||||| || ||||| ||| ||||||||| ||||| |||||||| |
Sbjct: 264 cggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtacaggttgttgg 205
Query: 706 gctccttggtgaactgcaccttggcattgccgttgccgaactgcttcacaaggaaggagt 765
|||||||||||||||||||||||||||||| || |||||||||||||| |||||| |||
Sbjct: 204 gctccttggtgaactgcaccttggcattgctattcccgaactgcttcaccaggaagcagt 145
Query: 766 tgttcttcctcacaacctgccagatcagatcccctggaacggttgccatttcccttcgcc 825
|||||||| | |||| || |||||||| | | | ||||| || |||||||| |||||||
Sbjct: 144 tgttcttcttgacaatctcccagatcaaaggctccggaaccgtcgccatttcgcttcgcc 85
Query: 826 ggagaaga-ggtgccgcggcgtcgcctcgct 855
|||| ||| || || |||||| |||||||||
Sbjct: 84 ggaggagatggggctgcggcgccgcctcgct 54
>gb|CF313982.1|CF313982 HD--02-F08.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--02-F08, mRNA sequence
Length = 472
Score = 396 bits (200), Expect = e-108
Identities = 377/434 (86%), Gaps = 4/434 (0%)
Strand = Plus / Minus
Query: 426 tggaggctgaggtacaccgagctcagcctagcaagagctggcttggtcagatcaggcctg 485
||||||||| ||||||| ||||| ||||| |||||||| ||||||||||| |||||||||
Sbjct: 472 tggaggctgcggtacactgagctaagcctcgcaagagccggcttggtcaggtcaggcctg 413
Query: 486 tagtagttgtcactaacctggtttttcacagccttggccatcttgcggaactccttgcgc 545
|||||||||||||| |||||||| || |||||||| ||||| ||||||||||||||||||
Sbjct: 412 tagtagttgtcactcacctggttcttgacagccttagccattttgcggaactccttgcgc 353
Query: 546 atcacagacttgtggctgagcttcgcaggtgcgttctgcttcttggtcttggtagtagag 605
||||||||||||||| ||||||||| || || |||||||||||||||||||| || |||
Sbjct: 352 atcacagacttgtggtagagcttcgctggggcattctgcttcttggtcttggttgtggag 293
Query: 606 aggaccacagccgagtcctt---tgcagctggctggatcgtcacagtcttcttgttcgcc 662
|||||||| |||| |||||| | | ||||||||||||||| |||||||||||||||
Sbjct: 292 aggaccacggccgcgtccttcacgcctgatggctggatcgtcacggtcttcttgttcgcc 233
Query: 663 aaacccgagtgtttgaaggagtggatgttgtagaggttgttcggctccttggtgaactgc 722
|| || ||||| ||| ||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 232 aagccagagtgcttgtaggagtggacattgtacaggttgttgggctccttggtgaactgc 173
Query: 723 accttggcattgccgttgccgaactgcttcacaaggaaggagttgttcttcctcacaacc 782
||||||||||||| || |||||||||||||| |||||| ||||||||||| | |||| |
Sbjct: 172 accttggcattgctattcccgaactgcttcaccaggaagcagttgttcttcttgacaatc 113
Query: 783 tgccagatcagatcccctggaacggttgccatttcccttcgccggagaaga-ggtgccgc 841
| |||||||| | | | ||||| || |||||||| ||||||||||||||| || || ||
Sbjct: 112 tcccagatcaaaggctccggaaccgtcgccatttcgcttcgccggagaagatggggctgc 53
Query: 842 ggcgtcgcctcgct 855
|||| |||||||||
Sbjct: 52 ggcgccgcctcgct 39
>gb|CV730451.1|CV730451 FLO--03-P24.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--03-P24,
mRNA sequence
Length = 530
Score = 391 bits (197), Expect = e-106
Identities = 390/451 (86%), Gaps = 5/451 (1%)
Strand = Plus / Minus
Query: 409 caccggacttggcaacctggaggctgaggtacaccgagctcagcctagcaagagctggct 468
|||| ||||||| ||||||||||||| ||||||| ||||| ||||| |||||||| ||||
Sbjct: 527 caccagacttggaaacctggaggctgcggtacactgagctaagcctcgcaagagccggct 468
Query: 469 tggtcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatct 528
||||||| ||||||||||||||||||||||| |||||||| || |||||||| ||||| |
Sbjct: 467 tggtcaggtcaggcctgtagtagttgtcactcacctggttcttgacagccttagccattt 408
Query: 529 tgcggaactccttgcgcatcacagacttgtggctgagcttcgcaggtgcgttctgcttct 588
|||||||||||||||||||||||||||||||| ||||||||| || || ||||||||||
Sbjct: 407 tgcggaactccttgcgcatcacagacttgtggtagagcttcgctggggcattctgcttct 348
Query: 589 tggtcttggtagtagagaggaccacagccgagtcctt---tgcagctggctggatcgtca 645
|||||||||| || ||||||||||| |||| |||||| | | ||||||||||||||
Sbjct: 347 tggtcttggttgtggagaggaccacggccgcgtccttcacgcctgatggctggatcgtca 288
Query: 646 cagtcttcttgttcgccaaacccgagtgtttgaaggagtggatgttgtagaggttgttcg 705
| ||||||||||||||||| || ||||| ||| ||||||||| ||||| |||||||| |
Sbjct: 287 cggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtacaggttgttgg 228
Query: 706 gctccttggtgaactgcaccttggcattgccgttgccgaactgcttcacaaggaaggagt 765
||||||||||||||||||||||||| | || || |||||||||||||| |||||| |||
Sbjct: 227 gctccttggtgaactgcaccttggc-tagctattcccgaactgcttcaccaggaagcagt 169
Query: 766 tgttcttcctcacaacctgccagatcagatcccctggaacggttgccatttcccttcgcc 825
|||||||| | |||| || |||||||| | | | ||||| || |||||||| |||||||
Sbjct: 168 tgttcttcttgacaatctcccagatcaaaggctccggaaccgtcgccatttcgcttcgcc 109
Query: 826 ggagaaga-ggtgccgcggcgtcgcctcgct 855
|||||||| || || |||||| |||||||||
Sbjct: 108 ggagaagatggggctgcggcgccgcctcgct 78
>gb|CV732963.1|CV732963 FLO--07-K20.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--07-K20,
mRNA sequence
Length = 535
Score = 391 bits (197), Expect = e-106
Identities = 385/446 (86%), Gaps = 4/446 (0%)
Strand = Plus / Minus
Query: 414 gacttggcaacctggaggctgaggtacaccgagctcagcctagcaagagctggcttggtc 473
||||||| |||||||||| || ||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 535 gacttggaaacctggaggntgcggtacactgagctaagcctcgcaagagccggcttggtc 476
Query: 474 agatcaggcctgtagtagttgtcactaacctggtttttcacagccttggccatcttgcgg 533
|| ||||||||||||||||||||||| |||||||| || |||||||| ||||| ||||||
Sbjct: 475 aggtcaggcctgtagtagttgtcactcacctggttcttgacagccttagccattttgcgg 416
Query: 534 aactccttgcgcatcacagacttgtggctgagcttcgcaggtgcgttctgcttcttggtc 593
||||||||||||||||||||||||||| ||||||||| || || |||||||||||||||
Sbjct: 415 aactccttgcgcatcacagacttgtggtagagcttcgctggggcattctgcttcttggtc 356
Query: 594 ttggtagtagagaggaccacagccgagtcctt---tgcagctggctggatcgtcacagtc 650
|| || || ||||||||||| |||| |||||| | | ||||||||||||||| |||
Sbjct: 355 ttcgttgtggagaggaccacggccgcgtccttcacgcctgatggctggatcgtcacggtc 296
Query: 651 ttcttgttcgccaaacccgagtgtttgaaggagtggatgttgtagaggttgttcggctcc 710
|||||||||||||| || ||||| ||| ||||||||| ||||| |||||||| ||||||
Sbjct: 295 ttcttgttcgccaagccagagtgcttgtaggagtggacattgtacaggttgttgggctcc 236
Query: 711 ttggtgaactgcaccttggcattgccgttgccgaactgcttcacaaggaaggagttgttc 770
||||||||||||||||||||||||| || ||||| |||||||| |||||| ||||||||
Sbjct: 235 ttggtgaactgcaccttggcattgctattcccgaaatgcttcaccaggaagcagttgttc 176
Query: 771 ttcctcacaacctgccagatcagatcccctggaacggttgccatttcccttcgccggaga 830
||| | |||| || |||||||| | | | ||||| || |||||||| ||||||||||||
Sbjct: 175 ttcttgacaatctcccagatcaaaggctccggaaccgtcgccatttcgcttcgccggaga 116
Query: 831 aga-ggtgccgcggcgtcgcctcgct 855
||| || || |||||| |||||||||
Sbjct: 115 agatggggctgcggcgccgcctcgct 90
>gb|AU092722.1|AU092722 AU092722 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C53064, mRNA sequence
Length = 605
Score = 387 bits (195), Expect = e-105
Identities = 307/344 (89%), Gaps = 3/344 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
|||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||||
Sbjct: 353 ctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgagct 294
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 293 aagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctggtt 234
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 233 cttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtggtagagctt 174
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttgc 628
|| || || |||||||||||||||||||| || |||||||||||||||| ||||||| |
Sbjct: 173 agctggggcattctgcttcttggtcttggtcgtggagaggaccacagccgcgtcctttcc 114
Query: 629 a---gctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
| | ||||||||||||||| ||||||||||||||||| || ||||| ||| |||||||
Sbjct: 113 acctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtg 54
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttgg 729
| ||||| | |||||| |||||||||||||||||||||||||
Sbjct: 53 aacattgtacangttgttgggctccttggtgaactgcaccttgg 10
>gb|CF331204.1|CF331204 NACL--07-D18.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--07-D18, mRNA sequence
Length = 561
Score = 369 bits (186), Expect = 2e-099
Identities = 308/348 (88%), Gaps = 3/348 (0%)
Strand = Plus / Plus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
|||||||||||||||||| ||||| |||||||||||||||||| | ||||||| |||||
Sbjct: 214 ctgcctgttcttcttcttcacaccaaacttggcaacctggaggccgcggtacactgagct 273
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 274 aagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctggtt 333
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 334 cttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtggtagagctt 393
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttgc 628
| || || |||||||||||||||| ||| || |||||||||||||||| ||||||| |
Sbjct: 394 aactggggcattctgcttcttggtctgggtcgtggagaggaccacagccgcgtcctttcc 453
Query: 629 a---gctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
| | ||||||||||||||| ||||||||||||||||| || ||||| ||| |||||||
Sbjct: 454 acctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtg 513
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcatt 733
| ||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 514 aacattgtacaggttgttgggctccttggtgaactgcaccttggcatt 561
>gb|AU077730.1|AU077730 AU077730 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61039_1A, mRNA sequence
Length = 477
Score = 335 bits (169), Expect = 3e-089
Identities = 378/441 (85%), Gaps = 8/441 (1%)
Strand = Plus / Minus
Query: 397 tcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagctcagcctag 456
||||||||||| |||| ||||||| ||||||||||||| |||||| ||||| ||||| |
Sbjct: 467 tcttcttcttggcaccagacttggaaacctggaggctgcggtacat-gagctaagcctcg 409
Query: 457 caagagctggcttggtcagatcaggcctgtagtagttgtcacta-acctggtttttcaca 515
||||| | |||||| |||| ||||||||||||||||||||||| |||||||| || |||
Sbjct: 408 caagacc-ggcttgttcaggtcaggcctgtagtagttgtcacttcacctggttcttgaca 350
Query: 516 gccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagcttcgcaggt 575
||||| ||||| ||||||||||||||||||||||||||||||||| || ||||| ||
Sbjct: 349 gccttagccattttgcggaactccttgcgcatcacagacttgtggtaga-nttcgctggg 291
Query: 576 gcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt---tgcagct 632
|| |||||||||||||||||||| || ||||||||||| |||| |||||| | | |
Sbjct: 290 gcattctgcttcttggtcttggttgtggagaggaccacggccgcgtccttcacgcctgat 231
Query: 633 ggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtggatgttg 692
|||||||||||||| ||||||||||||||||| || ||||| ||| ||||||||| |||
Sbjct: 230 ggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtggacattg 171
Query: 693 tagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaactgcttc 752
|| |||||||| ||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 170 tacaggttgttgggctccttggtgaactgcaccttggcattgctattcccgaactgcttc 111
Query: 753 acaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaacggttgcc 812
|| |||||| ||||||||||| | |||| || |||||||| | | | ||||| || |||
Sbjct: 110 accaggaagcagttgttcttcttgacaatctcccagatcaaaggctccggaaccgtcgcc 51
Query: 813 atttcccttcgccggagaaga 833
|||| | ||||||||||||||
Sbjct: 50 attt-cnttcgccggagaaga 31
>gb|CB682632.1|CB682632 OSJNEf10C22.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf10C22 5', mRNA sequence
Length = 536
Score = 335 bits (169), Expect = 3e-089
Identities = 252/279 (90%), Gaps = 3/279 (1%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
|||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||||
Sbjct: 302 ctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgagct 243
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 242 aagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctggtt 183
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 182 cttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtggtagagctt 123
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttgc 628
|| || || |||||||||||||||||||| || |||||||||||||||| ||||||| |
Sbjct: 122 agctggggcattctgcttcttggtcttggtcgtggagaggaccacagccgcgtcctttcc 63
Query: 629 a---gctggctggatcgtcacagtcttcttgttcgccaa 664
| | ||||||||||||||| |||||||||||||||||
Sbjct: 62 acctgatggctggatcgtcacggtcttcttgttcgccaa 24
>gb|AU089680.1|AU089680 AU089680 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C20036, mRNA sequence
Length = 500
Score = 333 bits (168), Expect = 1e-088
Identities = 295/338 (87%), Gaps = 3/338 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||| |||||
Sbjct: 338 ctgcctgttcttcttcttggcaccagacttggaaacctggaggctgcggtacactgagct 279
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| || |||||||| |||||||||||||||| |||||| ||||||||
Sbjct: 278 aagcctcgcaagagccggnttggtcaggtcaggcctgtagtagtngtcactcacctggtt 219
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 218 cttgacagccttagccattttgcggaactccttgcgcatcacagacttgtggtagagctt 159
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt--- 625
||| || || ||| |||||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 158 cgctggggcattcngcttcttggtcttggttgtggagaggaccacggccgcgtccttcac 99
Query: 626 tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
| | ||||||||||||||| | ||||||||||||||| || ||||| ||| |||||||
Sbjct: 98 gcctgatggctggatcgtcacggncttcttgttcgccaagccagagtgcttgtaggagtg 39
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgca 723
|| ||||| |||||||| |||||||||||||||||||
Sbjct: 38 gacattgtacaggttgttgggctccttggtgaactgca 1
>gb|CV733745.1|CV733745 FLO--08-M18.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--08-M18,
mRNA sequence
Length = 492
Score = 333 bits (168), Expect = 1e-088
Identities = 287/326 (88%), Gaps = 3/326 (0%)
Strand = Plus / Plus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||| |||||
Sbjct: 167 ctgcctgttcttcttcttggcaccagacttggaaacctggaggctgcggtacactgagct 226
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 227 aagcctcgcaagagccggcttggtcaggtcaggcctgtagtagttgtcactcacctggtt 286
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 287 cttgacagccttagccattttgcggaactccttgcgcatcacagacttgtggtagagctt 346
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt--- 625
||| || || |||||||||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 347 cgctggggcattctgcttcttggtcttggttgtggagaggaccacggccgcgtccttcac 406
Query: 626 tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
| | ||||||||||||||| ||||||||||||||||| || ||||| ||| |||||||
Sbjct: 407 gcctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtg 466
Query: 686 gatgttgtagaggttgttcggctcct 711
|| ||||| |||||||| |||||||
Sbjct: 467 gacattgtacaggttgttgggctcct 492
>gb|AU057623.1|AU057623 AU057623 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S21625_2Z, mRNA sequence
Length = 510
Score = 325 bits (164), Expect = 2e-086
Identities = 280/318 (88%), Gaps = 3/318 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||| |||||
Sbjct: 320 ctgcctgttcttcttcttggcaccagacttggaaacctggaggctgcggtacactgagct 261
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 260 aagcctcgcaagagccggcttggtcaggtcaggcctgtagtagttgtcactcacctggtt 201
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 200 cttgacagccttagccattttgcggaactccttgcgcatcacagacttgtggtagagctt 141
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt--- 625
||| || || |||||||||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 140 cgctggggcattctgcttcttggtcttggttgtggagaggaccacggccgcgtccttcac 81
Query: 626 tgcagctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
| | ||||||||||||||| ||||||||||||||||| || ||||| ||| |||||||
Sbjct: 80 gcctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtg 21
Query: 686 gatgttgtagaggttgtt 703
|| ||||| ||||||||
Sbjct: 20 gacattgtacaggttgtt 3
>gb|AU057622.1|AU057622 AU057622 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S21625_1A, mRNA sequence
Length = 424
Score = 321 bits (162), Expect = 4e-085
Identities = 329/382 (86%), Gaps = 5/382 (1%)
Strand = Plus / Minus
Query: 456 gcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtttttcaca 515
|||||||| ||||||||||| ||||||||||||||||||||||| |||||||| || |||
Sbjct: 420 gcaagagccggcttggtcaggtcaggcctgtagtagttgtcactcacctggttcttgaca 361
Query: 516 gccttggccatcttgcggaactccttgcgcatcacagacttgtggctgag-cttcgcagg 574
||||| ||||| ||||||||||||||||||||||||||||||||| | || ||||| ||
Sbjct: 360 gccttagccattttgcggaactccttgcgcatcacagacttgtgg-taaganttcgctgg 302
Query: 575 tgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt---tgcagc 631
|| |||||||||||||||||||| || ||||||||||| |||| |||||| | |
Sbjct: 301 ggcattctgcttcttggtcttggttgtggagaggaccacggccgcgtccttcacgcctga 242
Query: 632 tggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtggatgtt 691
||||||||||||||| ||||||||||||||||| || ||||| ||| ||||||||| ||
Sbjct: 241 tggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtggacatt 182
Query: 692 gtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaactgctt 751
||| |||||||| ||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 181 gtacaggttgttgggctccttggtgaactgcaccttggcattgctattcccgaactgctt 122
Query: 752 cacaaggaaggagttgttcttcctcacaacctgccagatcagatcccctggaacggttgc 811
||| |||||| ||||||||||| | |||| || |||||||| | | | ||||| || ||
Sbjct: 121 caccaggaagcagttgttcttcttgacaatctcccagatcaaaggctccggaaccgtcgc 62
Query: 812 catttcccttcgccggagaaga 833
||| | | ||||||||||||||
Sbjct: 61 catnttcgttcgccggagaaga 40
>dbj|AK062099.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-A03, full
insert sequence
Length = 669
Score = 309 bits (156), Expect = 1e-081
Identities = 239/266 (89%), Gaps = 3/266 (1%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
|||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||||
Sbjct: 266 ctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgagct 207
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 206 aagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctggtt 147
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 146 cttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtggtagagctt 87
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttgc 628
|| || || |||||||||||||||||||| || |||||||||||||||| ||||||| |
Sbjct: 86 agctggggcattctgcttcttggtcttggtcgtggagaggaccacagccgcgtcctttcc 27
Query: 629 a---gctggctggatcgtcacagtct 651
| | ||||||||||||||| ||||
Sbjct: 26 acctgatggctggatcgtcacggtct 1
>gb|AU077731.1|AU077731 AU077731 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61039_2Z, mRNA sequence
Length = 472
Score = 303 bits (153), Expect = 9e-080
Identities = 248/279 (88%), Gaps = 3/279 (1%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||| |||||
Sbjct: 287 ctgcctgttcttcttcttggcaccagacttggaaacctggaggctgcggtacactgagct 228
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 227 aagcctcgcaagagccggcttggtcaggtcaggcctgtagtagttgtcactcacctggtt 168
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 167 cttgacagccttagccattttgcggaactccttgcgcatcacagacttgtggtagagctt 108
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt--- 625
||| || || |||||||||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 107 cgctggggcattctgcttcttggtcttggttgtggagaggaccacggccgcgtccttcac 48
Query: 626 tgcagctggctggatcgtcacagtcttcttgttcgccaa 664
| | ||||||||||||||| |||||||||||||||||
Sbjct: 47 gcctgatggctggatcgtcacggtcttcttgttcgccaa 9
>dbj|AK066599.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013069H24, full
insert sequence
Length = 2403
Score = 303 bits (153), Expect = 9e-080
Identities = 309/359 (86%), Gaps = 4/359 (1%)
Strand = Plus / Minus
Query: 501 acctggtttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtgg 560
|||||||| || |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 393 acctggttcttgacagccttagccattttgcggaactccttgcgcatcacagacttgtgg 334
Query: 561 ctgagcttcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgag 620
||||||||| || || |||||||||||||||||||| || ||||||||||| |||| |
Sbjct: 333 tagagcttcgctggggcattctgcttcttggtcttggttgtggagaggaccacggccgcg 274
Query: 621 tcctttgcagctg---gctggatcgtcacagtcttcttgttcgccaaacccgagtgtttg 677
||||| | ||| ||||||||||||| ||||||||||||||||| || ||||| |||
Sbjct: 273 tccttcacgcctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttg 214
Query: 678 aaggagtggatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccg 737
||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 213 taggagtggacattgtacaggttgttgggctccttggtgaactgcaccttggcattgcta 154
Query: 738 ttgccgaactgcttcacaaggaaggagttgttcttcctcacaacctgccagatcagatcc 797
|| |||||||||||||| |||||| ||||||||||| | |||| || |||||||| | |
Sbjct: 153 ttcccgaactgcttcaccaggaagcagttgttcttcttgacaatctcccagatcaaaggc 94
Query: 798 cctggaacggttgccatttcccttcgccggagaaga-ggtgccgcggcgtcgcctcgct 855
| ||||| || |||||||| ||||||||||||||| || || |||||| |||||||||
Sbjct: 93 tccggaaccgtcgccatttcgcttcgccggagaagatggggctgcggcgccgcctcgct 35
Score = 153 bits (77), Expect = 2e-034
Identities = 107/117 (91%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||| |||||
Sbjct: 2143 ctgcctgttcttcttcttggcaccagacttggaaacctggaggctgcggtacactgagct 2084
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctg 505
||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 2083 aagcctcgcaagagccggcttggtcaggtcaggcctgtagtagttgtcactcacctg 2027
>gb|CF300692.1|CF300692 7LEAF--05-E08.b1 Rice leaf plasmid cDNA library II (7LEAF) Oryza
sativa (japonica cultivar-group) cDNA clone
7LEAF--05-E08, mRNA sequence
Length = 467
Score = 299 bits (151), Expect = 1e-078
Identities = 247/278 (88%), Gaps = 2/278 (0%)
Strand = Plus / Plus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||| |||||
Sbjct: 187 ctgcctgttcttcttcttggcaccagacttggaaacctggaggctgcggtacactgagct 246
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 247 aagcctcgcaagagccggcttggtcaggtcaggcctgtagtagttgtcactcacctggtt 306
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||| ||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 307 cttgacagccttagccattttgcggaactccttgcgcatcacagacttgtggtaaagctt 366
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt--t 626
||| || || |||||||||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 367 cgctggggcattctgcttcttggtcttggttgtggagaggaccacggccgcgtccttacg 426
Query: 627 gcagctggctggatcgtcacagtcttcttgttcgccaa 664
| | ||||||||||||||| |||||||||||||||||
Sbjct: 427 cctgatggctggatcgtcacggtcttcttgttcgccaa 464
>ref|NM_191653.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 438
Score = 291 bits (147), Expect = 3e-076
Identities = 344/409 (84%), Gaps = 3/409 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||| |||||||| || |||||||||||||||||| |||| || | |||
Sbjct: 429 ctgcctgttcttctttttgacaccagatttggcaacctggaggctgcggtagactgcgct 370
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| ||||||||||| || ||||||| |||||||||||| || ||||||||
Sbjct: 369 cagccttgcaagtgctggcttggtaaggtcaggccggtagtagttgtcgctgacctggtt 310
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||||||||| |||||||||||||||||||| |||||||||||| ||| |
Sbjct: 309 cttgacagccttggccattttgcggaactccttgcgcatgacagacttgtggtagaggct 250
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttgc 628
||||| ||||||||||| |||||||| |||||||||||||| |||| ||||| |
Sbjct: 249 agcaggcttgttctgcttctctgtcttggttgtagagaggaccactgccgtttccttacc 190
Query: 629 a---gctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
| || ||||||| |||||| || |||||||| |||| || || || ||| | |||||
Sbjct: 189 actggcaggctggaccgtcacggttttcttgtttgccaggccagaatgcttgtaagagtg 130
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| ||||| |||||||| ||||||||| ||||||| |||||||||||||| ||||||||
Sbjct: 129 gacattgtacaggttgttgggctccttgctgaactgaaccttggcattgccattgccgaa 70
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcaga 794
|||||| || ||||| || ||||||||| | |||| || ||||| ||||
Sbjct: 69 ctgcttgaccaggaatgaattgttcttcttgacaagctcccagaccaga 21
>gb|C27746.1|C27746 C27746 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C52755_1A, mRNA sequence
Length = 402
Score = 285 bits (144), Expect = 2e-074
Identities = 336/395 (85%), Gaps = 7/395 (1%)
Strand = Plus / Minus
Query: 465 ggcttggtcagatcaggcctgtagtagttgtcactaacctggtttttcacagccttggcc 524
|||||||| || | |||||||||||||| || ||| |||||||| || |||||||| |||
Sbjct: 399 ggcttggtaaggtaaggcctgtagtagt-gtaactcacctggttcttgacagccttagcc 341
Query: 525 atcttgcggaactccttgcgcatcacagacttgtggctgagcttcgcaggtgcgttctgc 584
|| ||||||||||||||||||||||||||||||||| || |||||| || | ||||||
Sbjct: 340 attttgcggaactccttgcgcatcacagacttgtggtaga-cttcgctggggnattctgc 282
Query: 585 ttcttggtcttggtagtagagaggaccacagccgagtcctttgcagctg---gctggatc 641
|||||||||||||| || ||||||||||| |||| |||||| | ||| ||||||||
Sbjct: 281 ttcttggtcttggttgtggagaggaccacggccgcgtccttcacgcctgatggctggatc 222
Query: 642 gtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtggatgttgtagaggttg 701
|| || ||||||||||||||||| || ||||| ||| ||||||||| ||||| ||||||
Sbjct: 221 gtnacggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtacaggttg 162
Query: 702 ttcggctccttggtgaactgcaccttggcattgccgttgccgaactgcttcacaaggaag 761
|| ||||||||||||||||||||||||||||||| || |||||||||||||| ||||||
Sbjct: 161 ttgggctccttggtgaactgcaccttggcattgctattcccgaactgcttcaccaggaag 102
Query: 762 gagttgttcttcctcacaacctgccagatcagatcccctggaacggttgccatttccctt 821
||||||||||| | |||| || |||||||| | | || ||||| || ||||| | ||||
Sbjct: 101 cagttgttcttcttgacaatctcccagatcaaagctcc-ggaaccgtcgccatnttcctt 43
Query: 822 cgccggagaaga-ggtgccgcggcgtcgcctcgct 855
|||||||||||| || || |||||| |||||||||
Sbjct: 42 cgccggagaagatggggctgcggcgccgcctcgct 8
>gb|CF330253.1|CF330253 NACL--05-O09.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--05-O09, mRNA sequence
Length = 607
Score = 276 bits (139), Expect = 2e-071
Identities = 342/409 (83%), Gaps = 3/409 (0%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||| |||||||| || |||||||||||||||||| |||| || | |||
Sbjct: 498 ctgcctgttcttctttttgacaccagatttggcaacctggaggctgcggtagactgcgct 439
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
|||||| ||||| ||||||||||| || ||||||| |||||||||||| || ||||||||
Sbjct: 438 cagccttgcaagtgctggcttggtaaggtcaggccggtagtagttgtcgctgacctggtt 379
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||||||||| |||||||||||||||||| | |||||||||||| ||| |
Sbjct: 378 cttgacagccttggccattttgcggaactccttgcgcgtgacagacttgtggtagaggct 319
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttgc 628
||||| ||||||||||| |||||||| |||||||||||||| |||| ||||| |
Sbjct: 318 agcaggcttgttctgcttctctgtcttggttgtagagaggaccactgccgtttccttacc 259
Query: 629 a---gctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
| || ||||| | |||||| || |||||||| |||| || || || ||| | |||||
Sbjct: 258 actggcaggctgaaccgtcacggttttcttgtttgccaggccagaatgcttgtaagagtg 199
Query: 686 gatgttgtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaa 745
|| ||||| |||||||| ||||||||| ||||||| |||||||||||||| ||||||||
Sbjct: 198 gacattgtacaggttgttgggctccttgctgaactgaaccttggcattgccattgccgaa 139
Query: 746 ctgcttcacaaggaaggagttgttcttcctcacaacctgccagatcaga 794
|||||| || ||||| || ||||||||| | |||| || ||||| ||||
Sbjct: 138 ctgcttgaccaggaatgaattgttcttcttgacaagctcccagaccaga 90
>gb|AU031211.1|AU031211 AU031211 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E61151_1A, mRNA sequence
Length = 408
Score = 274 bits (138), Expect = 8e-071
Identities = 192/210 (91%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
|||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||||
Sbjct: 215 ctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgagct 156
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 155 aagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctggtt 96
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 95 cttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtggtagagctt 36
Query: 569 cgcaggtgcgttctgcttcttggtcttggt 598
|| || || ||||||||||||||||||||
Sbjct: 35 agctggggcattctgcttcttggtcttggt 6
>gb|D23418.1|D23418 RICC2782A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2782_1A, mRNA sequence
Length = 398
Score = 266 bits (134), Expect = 2e-068
Identities = 211/237 (89%)
Strand = Plus / Minus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
||||||||||||||||||| |||| ||||||| ||||||||||||| ||||||| |||||
Sbjct: 243 ctgcctgttcttcttcttggcaccagacttggaaacctggaggctgcggtacactgagct 184
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 183 aagcctcgcaagagccggcttggtcaggtcaggcctgtagtagttgtcactcacctggtt 124
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||| ||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 123 cttgacagccttagccattttgcggaactccttgcgcatcacagacttgtggtangactt 64
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt 625
||| || || |||||||||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 63 cgctggggcattctgcttcttggtcttggttgtggagaggaccacggccgcgtcctt 7
>gb|CF280323.1|CF280323 14ETL--06-P03.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--06-P03, mRNA sequence
Length = 437
Score = 264 bits (133), Expect = 8e-068
Identities = 231/263 (87%), Gaps = 3/263 (1%)
Strand = Plus / Minus
Query: 530 gcggaactccttgcgcatcacagacttgtggctgagcttcgcaggtgcgttctgcttctt 589
||||||||||||||||||||||||||||||| |||||| || || || |||||||||||
Sbjct: 437 gcggaactccttgcgcatcacagacttgtggtagagcttagctggggcattctgcttctt 378
Query: 590 ggtcttggtagtagagaggaccacagccgagtcctttgcagctg---gctggatcgtcac 646
||||||||| || |||||||||||||||| ||||||| || ||| |||||||||||||
Sbjct: 377 ggtcttggtcgtggagaggaccacagccgcgtcctttccacctgatggctggatcgtcac 318
Query: 647 agtcttcttgttcgccaaacccgagtgtttgaaggagtggatgttgtagaggttgttcgg 706
||||||||||||||||| || ||||| ||| ||||||| | ||||| |||||||| ||
Sbjct: 317 ggtcttcttgttcgccaagccagagtgcttgtaggagtgaacattgtacaggttgttggg 258
Query: 707 ctccttggtgaactgcaccttggcattgccgttgccgaactgcttcacaaggaaggagtt 766
||||||||||||||||||||||||||||| ||| || ||||||||||| |||||| ||||
Sbjct: 257 ctccttggtgaactgcaccttggcattgctgtttccaaactgcttcacgaggaagcagtt 198
Query: 767 gttcttcctcacaacctgccaga 789
||||||| |||||| || |||||
Sbjct: 197 gttcttcttcacaatctcccaga 175
>gb|D23397.1|D23397 RICC2751A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2751_1A, mRNA sequence
Length = 523
Score = 260 bits (131), Expect = 1e-066
Identities = 312/372 (83%), Gaps = 6/372 (1%)
Strand = Plus / Minus
Query: 467 cttggtcagatcaggcctgtagtagttgtcactaacctggttt-ttcacagccttggcca 525
||||||||| ||||||||||||||||||||||| |||||| | || ||| |||| ||||
Sbjct: 417 cttggtcaggtcaggcctgtagtagttgtcactcacctgggntcttgacanccttagcca 358
Query: 526 tcttgcggaactccttgcgcatcacagacttgtggctgagcttcgcaggtgcgttctgct 585
| ||||||||||||||||||||||||||||||||| || |||| | || | |||| ||
Sbjct: 357 ttttgcggaactccttgcgcatcacagacttgtggtaga-cttcnctgggacattctnct 299
Query: 586 tcttggtcttggtagtagagaggaccacagccgagtcctttgcagc----tggctggatc 641
||||||||||||| || ||||||||||| ||| | |||| || || |||||||
Sbjct: 298 tcttggtcttggttgtggagaggaccacggccncgnccttcaacgcctgatgnctggatc 239
Query: 642 gtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtggatgttgtagaggttg 701
||||| ||||||||||||||||| || ||||| ||| ||||||||| ||||| ||||||
Sbjct: 238 gtcacggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtacaggttg 179
Query: 702 ttcggctccttggtgaactgcaccttggcattgccgttgccgaactgcttcacaaggaag 761
|| ||||||||||||||||||||||||||||||| || |||||||||||||| ||||||
Sbjct: 178 ttgggctccttggtgaactgcaccttggcattgctattcccgaactgcttcaccaggaag 119
Query: 762 gagttgttcttcctcacaacctgccagatcagatcccctggaacggttgccatttccctt 821
||||||||||| | |||| || |||||||| | | | ||||| || ||||| | ||||
Sbjct: 118 cagttgttcttcttgacaatctcccagatcaaaggctccggaaccgtcgccatnttcctt 59
Query: 822 cgccggagaaga 833
||||||||||||
Sbjct: 58 cgccggagaaga 47
>gb|D23395.1|D23395 RICC2748A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2748_1A, mRNA sequence
Length = 373
Score = 258 bits (130), Expect = 5e-066
Identities = 284/333 (85%), Gaps = 5/333 (1%)
Strand = Plus / Minus
Query: 528 ttgcggaactccttgcgcatcacagacttgtggctgag-cttcgcaggtgcgttctgctt 586
||||||||||||||||||||||||||||||||| | || |||||| || || ||||||||
Sbjct: 356 ttgcggaactccttgcgcatcacagacttgtgggtaagacttcgctggggcattctgctt 297
Query: 587 cttggtcttggtagtagagaggaccacagccgagtcctttgcagctg---gctggatcgt 643
|||||||||||| || ||||||||||| |||| |||||| | ||| ||||||||||
Sbjct: 296 cttggtcttggttgtggagaggaccacggccgcgtccttnacgcctgatggctggatcgt 237
Query: 644 cacagtcttcttgttcgccaaacccgagtgtttgaaggagtggatgttgtagaggttgtt 703
|| ||||||||||||||||| || ||||| ||| ||||||||| ||||| ||||||||
Sbjct: 236 nacggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtacaggttgtt 177
Query: 704 cggctccttggtgaactgcaccttggcattgccgttgccgaactgcttcacaaggaagga 763
||||||||||||||||||||||||||||||| || |||||||||||||| |||||| |
Sbjct: 176 gggctccttggtgaactgcaccttggcattgctattcccgaactgcttcaccaggaagca 117
Query: 764 gttgttcttcctcacaacctgccagatcagatcccctggaacggttgccatttcccttcg 823
|||||||||| | |||| || |||||||| | | | ||||| || ||||| | ||||||
Sbjct: 116 gttgttcttcttgacaatctcccagatcaaaggctccggaaccgtcgccatnttccttcg 57
Query: 824 ccggagaaga-ggtgccgcggcgtcgcctcgct 855
|||||||||| || || |||||| |||||||||
Sbjct: 56 ccggagaagatggggctgcggcgccgcctcgct 24
>gb|C27632.1|C27632 C27632 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C52439_1A, mRNA sequence
Length = 445
Score = 250 bits (126), Expect = 1e-063
Identities = 240/278 (86%), Gaps = 3/278 (1%)
Strand = Plus / Minus
Query: 515 agccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagcttcgcagg 574
|||||| || |||||||||||||||||||||||||||||||||||| | ||| || ||
Sbjct: 408 agccttagcnatcttgcggaactccttgcgcatcacagacttgtggtaaaccttagctgg 349
Query: 575 tgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttgcagctg- 633
| |||||||||||||||||||| || ||||||||||||||| ||||||| || |||
Sbjct: 348 ggnattctgcttcttggtcttggtcgtgaagaggaccacagccgcgtcctttccacctga 289
Query: 634 --gctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtggatgtt 691
||||||||||||| ||||||||||||||||| || ||||| ||| ||||||| | ||
Sbjct: 288 tggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtgaacatt 229
Query: 692 gtagaggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaactgctt 751
||| |||||||| ||||||||||||||||||||||||||||||| ||| || ||||||||
Sbjct: 228 gtacaggttgttgggctccttggtgaactgcaccttggcattgctgtttccaaactgctt 169
Query: 752 cacaaggaaggagttgttcttcctcacaacctgccaga 789
||| |||||| ||||||||||| |||||| || |||||
Sbjct: 168 cacgaggaagcagttgttcttcttcacaatctcccaga 131
>gb|C27786.1|C27786 C27786 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C52857_1A, mRNA sequence
Length = 346
Score = 232 bits (117), Expect = 3e-058
Identities = 281/332 (84%), Gaps = 6/332 (1%)
Strand = Plus / Minus
Query: 528 ttgcggaactccttgcgcatcacagacttgtggctgagcttcgcaggtgcgttctgcttc 587
|||||||||||||||||||| ||| |||||||| | || |||| || || |||||||||
Sbjct: 343 ttgcggaactccttgcgcatnacanacttgtgg-taagactcgctgg-gcattctgcttc 286
Query: 588 ttggtcttggtagtagagaggaccacagccgagtcctttgcagctg---gctggatcgtc 644
||||||||||| || ||||||||||| |||| |||||| | ||| |||||||||||
Sbjct: 285 ttggtcttggttgtggagaggaccacggccgcgtccttcacgcctgatggctggatcgtc 226
Query: 645 acagtcttcttgttcgccaaacccgagtgtttgaaggagtggatgttgtagaggttgttc 704
|| ||||||||||||||||| || ||||| ||| ||||||||| ||||| ||||||||
Sbjct: 225 acggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtacaggttgttg 166
Query: 705 ggctccttggtgaactgcaccttggcattgccgttgccgaactgcttcacaaggaaggag 764
||||||||||||||||||||||||||||||| || |||||||||||||| |||||| ||
Sbjct: 165 ggctccttggtgaactgcaccttggcattgctattcccgaactgcttcaccaggaagcag 106
Query: 765 ttgttcttcctcacaacctgccagatcagatcccctggaacggttgccatttcccttcgc 824
||||||||| | |||| || |||||| | | | | ||||| || ||||||| |||||||
Sbjct: 105 ttgttcttcttgacaatctcccagatnaaaggctccggaaccgtcgccattttccttcgc 46
Query: 825 cggagaaga-ggtgccgcggcgtcgcctcgct 855
||||||||| || || |||||| |||||||||
Sbjct: 45 cggagaagatggggctgcggcgccgcctcgct 14
>gb|D22671.1|D22671 RICC0835A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C0835_1A, mRNA sequence
Length = 337
Score = 230 bits (116), Expect = 1e-057
Identities = 281/331 (84%), Gaps = 7/331 (2%)
Strand = Plus / Minus
Query: 530 gcggaactccttgcgcatcacagacttgtggctgag-cttcgcaggtgcgttctgcttct 588
||||||||||||||||||||||||||||||| | || |||||| || || ||||||||||
Sbjct: 337 gcggaactccttgcgcatcacagacttgtgg-taagacttcgctggggcattctgcttct 279
Query: 589 tggtcttggtagtagagaggaccacagccgagtcctttgcagctg---gctggatcgtca 645
|||||||||| || |||||||||| |||| |||||| | ||| ||||||||||||
Sbjct: 278 tggtcttggttgtgnagaggaccacggccgcgtccttcacgcctgatggctggatcgtca 219
Query: 646 cagtcttcttgttcgccaaacccgagtgtttgaaggagtggatgttgtagaggttgttcg 705
| ||||||||||||||||| || ||||| ||| ||||||||| ||||| |||||||| |
Sbjct: 218 cggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtacaggttgttgg 159
Query: 706 gctccttggtgaactgcaccttggcattgccgttgccgaactgcttcacaaggaaggagt 765
|||||||||||||||||||||||||||||| || |||||||||||||| |||||| ||
Sbjct: 158 gctccttggtgaactgcaccttggcattgctattcccgaactgcttcaccaggaagcngt 99
Query: 766 tgttcttcctcacaacctgccagatcagatcccctggaacggttgccatttcccttcgcc 825
|||||||| | |||| || |||||||| | | || ||||| || ||||| | | ||||||
Sbjct: 98 tgttcttcttgacaatctcccagatcaaagctcc-ggaaccgtcgccatattcnttcgcc 40
Query: 826 ggagaaga-ggtgccgcggcgtcgcctcgct 855
|||||||| || || |||||| |||||||||
Sbjct: 39 ggagaagatggggctgcggcgccgcctcgct 9
>gb|CB000090.1|CB000090 S345W_C05 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 331
Score = 226 bits (114), Expect = 2e-056
Identities = 267/316 (84%), Gaps = 4/316 (1%)
Strand = Plus / Minus
Query: 522 gccatcttgcggaactccttgcgcatcacagacttgtggct-gagcttcgcaggtgcgtt 580
||||| ||||||||||||||||||||||||||||| || | ||||||||| || || ||
Sbjct: 328 gccattttgcggaactccttgcgcatcacagacttctgagtagagcttcgctggggcatt 269
Query: 581 ctgcttcttggtcttggtagtagagaggaccacagccgagtcctttgcagctg---gctg 637
|||||||||||||||||| || ||||||||||| | | |||||| | ||| ||||
Sbjct: 268 ctgcttcttggtcttggttgtggagaggaccacgcctgcgtccttcacgcctgatcgctg 209
Query: 638 gatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtggatgttgtagag 697
||||||||| ||||||||||||||||| || ||||| ||| ||||||||| ||||| ||
Sbjct: 208 gatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtacag 149
Query: 698 gttgttcggctccttggtgaactgcaccttggcattgccgttgccgaactgcttcacaag 757
|||||| ||||||||||||||||||||||||||||||| || |||||||||||||| ||
Sbjct: 148 gttgttgggctccttggtgaactgcaccttggcattgctattcccgaactgcttcaccag 89
Query: 758 gaaggagttgttcttcctcacaacctgccagatcagatcccctggaacggttgccatttc 817
|||| ||||||||||| | |||| || |||||||| | | | | || || ||||||||
Sbjct: 88 gaagcagttgttcttcttgacaatctcccagatcaaaggctccaggaccgtcgccatttc 29
Query: 818 ccttcgccggagaaga 833
|||||||||||||||
Sbjct: 28 gcttcgccggagaaga 13
>gb|CB682633.1|CB682633 OSJNEf10C22.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf10C22 3', mRNA sequence
Length = 692
Score = 226 bits (114), Expect = 2e-056
Identities = 254/300 (84%), Gaps = 3/300 (1%)
Strand = Plus / Plus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
|||||||||||||||||| ||||| ||||||||||||||||| || ||||||| || ||
Sbjct: 235 ctgcctgttcttcttcttcacaccaaacttggcaacctggagggtgcggtacactgaact 294
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||| | || ||||||| ||| ||||||||||| ||||||||||||||| |
Sbjct: 295 aagccttgcaagaaccggtttggtcaaatctggcctgtagtaattgtcactaacctgggt 354
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtggctgagctt 568
|| |||||||| ||||||||||||||||||||||||||||| ||||| || |||||
Sbjct: 355 cttgacagccttaaccatcttgcggaactccttgcgcatcacaaacttgggggaaagctt 414
Query: 569 cgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttgc 628
|| || || ||||||||||||||||||| | |||| ||||||||||| ||||||| |
Sbjct: 415 agctggggcattctgcttcttggtcttgggcggggagaagaccacagccgcgtcctttcc 474
Query: 629 a---gctggctggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtg 685
| | ||||||||||||||| | ||||||||||||||| || ||||| ||| |||||||
Sbjct: 475 acctgatggctggatcgtcacgggcttcttgttcgccaagccagagtgcttgtaggagtg 534
>gb|AU063118.1|AU063118 AU063118 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C53064_3A, mRNA sequence
Length = 465
Score = 224 bits (113), Expect = 7e-056
Identities = 230/267 (86%), Gaps = 5/267 (1%)
Strand = Plus / Minus
Query: 527 cttgcggaactccttgcgca-tcacagacttgtggctgagcttcgcaggtgcgttctgct 585
|||||| ||||||||||||| |||||||||||||| |||||| | || || |||||||
Sbjct: 362 cttgcgnaactccttgcgcaatcacagacttgtggtagagcttanctgg-gcattctgct 304
Query: 586 tcttggtcttggtagtagagaggaccacagccgagtcctttgcagctg---gctggatcg 642
||||||||||||| || |||||||||||||||| | |||| || ||| |||||||||
Sbjct: 303 tcttggtcttggtcgtggagaggaccacagccgcgnnctttccacctgatggctggatcg 244
Query: 643 tcacagtcttcttgttcgccaaacccgagtgtttgaaggagtggatgttgtagaggttgt 702
|||| ||||||||||||||||| || ||||| ||| ||||||| | ||||| |||||||
Sbjct: 243 tcacggtcttcttgttcgccaagccagagtgcttgtaggagtgaacattgtacaggttgt 184
Query: 703 tcggctccttggtgaactgcaccttggcattgccgttgccgaactgcttcacaaggaagg 762
| ||||||||||||||||||||||||||||||| ||| || ||||||||||| ||||||
Sbjct: 183 tgggctccttggtgaactgcaccttggcattgctgtttccaaactgcttcacgaggaagc 124
Query: 763 agttgttcttcctcacaacctgccaga 789
||||||||||| |||||| || |||||
Sbjct: 123 agttgttcttcttcacaatctcccaga 97
>gb|CF277732.1|CF277732 14ETL--03-G03.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--03-G03, mRNA sequence
Length = 432
Score = 218 bits (110), Expect = 4e-054
Identities = 146/158 (92%)
Strand = Plus / Plus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
|||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||||
Sbjct: 275 ctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgagct 334
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 335 aagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctggtt 394
Query: 509 tttcacagccttggccatcttgcggaactccttgcgca 546
|| |||||||| |||||||||||||||||||||||||
Sbjct: 395 cttgacagccttagccatcttgcggaactccttgcgca 432
>gb|AU065482.2|AU065482 AU065482 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C20036_2A, mRNA sequence
Length = 340
Score = 212 bits (107), Expect = 3e-052
Identities = 265/315 (84%), Gaps = 5/315 (1%)
Strand = Plus / Minus
Query: 545 catcacagacttgtggctgagcttcgcaggtgcgttctgcttcttggtcttggtagtaga 604
|||||||||||||||| ||| ||||| || || |||||||| ||||||||||| || ||
Sbjct: 337 catcacagacttgtggtagag-ttcgctggggcattctgcttnttggtcttggttgtgga 279
Query: 605 gaggaccacagccgagtcctttgcagctg---gctggatcgtcacagtcttcttgttcgc 661
||||||||| |||| |||||| | ||| ||||||||||||| ||||||||||||||
Sbjct: 278 gaggaccacggccgcgtccttcacgcctgatggctggatcgtcacggtcttcttgttcgc 219
Query: 662 caaacccgagtgtttgaaggagtggatgttgtagaggttgttcggctccttggtgaactg 721
||| || ||||| ||| ||||||||| ||||| |||||||| |||||||||||||||||
Sbjct: 218 caagccagagtgcttgtaggagtggacattgtacaggttgttgggctccttggtgaactg 159
Query: 722 caccttggcattgccgttgccgaactgcttcacaaggaaggagttgttcttcctcacaac 781
|||||||||||||| || |||||||||||||| |||||| ||||||||||| | ||||
Sbjct: 158 caccttggcattgctattcccgaactgcttcaccaggaagcagttgttcttcttgacaat 99
Query: 782 ctgccagatcagatcccctggaacggttgccatttcccttcgccggagaaga-ggtgccg 840
|| |||||||| | | | ||||| || ||||| | | |||||||||||||| || || |
Sbjct: 98 ctcccagatcaaaggctccggaaccgtcgccatattcnttcgccggagaagatggggctg 39
Query: 841 cggcgtcgcctcgct 855
||||| |||||||||
Sbjct: 38 cggcgccgcctcgct 24
>gb|CX728936.1|CX728936 OSJNEf16H22.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf16H22 3', mRNA sequence
Length = 403
Score = 196 bits (99), Expect = 1e-047
Identities = 153/171 (89%)
Strand = Plus / Plus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
|||||||||||||||||| ||||| |||||||||||||||||||| ||||||| |||||
Sbjct: 233 ctgcctgttcttcttcttcacaccatacttggcaacctggaggctgcggtacactgagct 292
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctggtt 508
||||| |||||||| || |||| || ||| ||||||||| ||||| |||||||||||||
Sbjct: 293 aagccttgcaagagccggtttggacatatctggcctgtagaagttgccactaacctggtt 352
Query: 509 tttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtg 559
|| |||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 353 cttgacagccttagccatcttgcggaactccttgcccatcacagacttgtg 403
>gb|D15263.1|D15263 RICC0376A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C0376A, mRNA sequence
Length = 323
Score = 190 bits (96), Expect = 9e-046
Identities = 187/217 (86%), Gaps = 3/217 (1%)
Strand = Plus / Minus
Query: 579 ttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttgcagctg---gc 635
|||||||||||||||||||| || ||||| ||||| |||| |||||| | ||| ||
Sbjct: 304 ttctgcttcttggtcttggttgtggagagnaccacggccgcgtccttaacgcctgatggc 245
Query: 636 tggatcgtcacagtcttcttgttcgccaaacccgagtgtttgaaggagtggatgttgtag 695
||||||||||| ||||||||||||||||| || ||||| ||| ||||||||| |||||
Sbjct: 244 tggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtac 185
Query: 696 aggttgttcggctccttggtgaactgcaccttggcattgccgttgccgaactgcttcaca 755
|||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 184 aggttgttgggctccttggtgaactgcaccttggcattgctattcccgaactgcttcacc 125
Query: 756 aggaaggagttgttcttcctcacaacctgccagatca 792
|||||| ||||||||||| | |||| || ||||||||
Sbjct: 124 aggaagcagttgttcttcttgacaatctcccagatca 88
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0474F11
Length = 139544
Score = 184 bits (93), Expect = 6e-044
Identities = 149/167 (89%), Gaps = 3/167 (1%)
Strand = Plus / Plus
Query: 501 acctggtttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtgg 560
|||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 87749 acctggttcttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtgg 87808
Query: 561 ctgagcttcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgag 620
|||||| || || || |||||||||||||||||||| || |||||||||||||||| |
Sbjct: 87809 tagagcttagctggggcattctgcttcttggtcttggtcgtggagaggaccacagccgcg 87868
Query: 621 tcctttgca---gctggctggatcgtcacagtcttcttgttcgccaa 664
|||||| || | ||||||||||||||| |||||||||||||||||
Sbjct: 87869 tcctttccacctgatggctggatcgtcacggtcttcttgttcgccaa 87915
Score = 161 bits (81), Expect = 8e-037
Identities = 108/117 (92%)
Strand = Plus / Plus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
|||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||||
Sbjct: 87115 ctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgagct 87174
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctg 505
||||| |||||||| || ||||||||||| ||||||||||||||||||||||||||
Sbjct: 87175 aagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctg 87231
Score = 121 bits (61), Expect = 7e-025
Identities = 106/121 (87%)
Strand = Plus / Plus
Query: 669 gagtgtttgaaggagtggatgttgtagaggttgttcggctccttggtgaactgcaccttg 728
||||| ||| ||||||| | ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 88021 gagtgcttgtaggagtgaacattgtacaggttgttgggctccttggtgaactgcaccttg 88080
Query: 729 gcattgccgttgccgaactgcttcacaaggaaggagttgttcttcctcacaacctgccag 788
||||||| ||| || ||||||||||| |||||| ||||||||||| |||||| || ||||
Sbjct: 88081 gcattgctgtttccaaactgcttcacgaggaagcagttgttcttcttcacaatctcccag 88140
Query: 789 a 789
|
Sbjct: 88141 a 88141
>gb|AACV01005659.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005659, whole
genome shotgun sequence
Length = 15634
Score = 184 bits (93), Expect = 6e-044
Identities = 149/167 (89%), Gaps = 3/167 (1%)
Strand = Plus / Plus
Query: 501 acctggtttttcacagccttggccatcttgcggaactccttgcgcatcacagacttgtgg 560
|||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 6076 acctggttcttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtgg 6135
Query: 561 ctgagcttcgcaggtgcgttctgcttcttggtcttggtagtagagaggaccacagccgag 620
|||||| || || || |||||||||||||||||||| || |||||||||||||||| |
Sbjct: 6136 tagagcttagctggggcattctgcttcttggtcttggtcgtggagaggaccacagccgcg 6195
Query: 621 tcctttgca---gctggctggatcgtcacagtcttcttgttcgccaa 664
|||||| || | ||||||||||||||| |||||||||||||||||
Sbjct: 6196 tcctttccacctgatggctggatcgtcacggtcttcttgttcgccaa 6242
Score = 161 bits (81), Expect = 8e-037
Identities = 108/117 (92%)
Strand = Plus / Plus
Query: 389 ctgcctgttcttcttcttgacaccggacttggcaacctggaggctgaggtacaccgagct 448
|||||||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||||
Sbjct: 5442 ctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgagct 5501
Query: 449 cagcctagcaagagctggcttggtcagatcaggcctgtagtagttgtcactaacctg 505
||||| |||||||| || ||||||||||| ||||||||||||||||||||||||||
Sbjct: 5502 aagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctg 5558
Score = 121 bits (61), Expect = 7e-025
Identities = 106/121 (87%)
Strand = Plus / Plus
Query: 669 gagtgtttgaaggagtggatgttgtagaggttgttcggctccttggtgaactgcaccttg 728
||||| ||| ||||||| | ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 6348 gagtgcttgtaggagtgaacattgtacaggttgttgggctccttggtgaactgcaccttg 6407
Query: 729 gcattgccgttgccgaactgcttcacaaggaaggagttgttcttcctcacaacctgccag 788
||||||| ||| || ||||||||||| |||||| ||||||||||| |||||| || ||||
Sbjct: 6408 gcattgctgtttccaaactgcttcacgaggaagcagttgttcttcttcacaatctcccag 6467
Query: 789 a 789
|
Sbjct: 6468 a 6468
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,354,433
Number of Sequences: 438736
Number of extensions: 1354433
Number of successful extensions: 8934
Number of sequences better than 0.5: 86
Number of HSP's better than 0.5 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8544
Number of HSP's gapped (non-prelim): 324
length of query: 919
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 898
effective length of database: 2,791,206,460
effective search space: 2506503401080
effective search space used: 2506503401080
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)