BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.654
(682 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU070938.1|AU070938 AU070938 Rice cDNA from young root O... 420 e-115
gb|CF282010.1|CF282010 14ETL--09-F05.g1 Rice etiolated leaf... 420 e-115
gb|CF326470.1|CF326470 JMT1--06-C11.g1 AtJMT-overexpressing... 420 e-115
dbj|AK120840.1| Oryza sativa (japonica cultivar-group) cDNA... 420 e-115
ref|NM_189457.1| Oryza sativa (japonica cultivar-group), p... 418 e-114
gb|AU085750.1|AU085750 AU085750 Rice callus Oryza sativa (j... 412 e-112
gb|AU164215.1|AU164215 AU164215 Rice panicle (longer than 1... 412 e-112
gb|CF278981.1|CF278981 14ETL--05-B23.b1 Rice etiolated leaf... 398 e-108
gb|CF196126.1|CF196126 Azvi1.1_E10 AZ-VI Oryza sativa (japo... 392 e-107
gb|CF311012.1|CF311012 ABF--06-B02.g1 ABF3-overexpressing t... 363 8e-098
gb|AU095591.1|AU095591 AU095591 Rice cDNA from young root O... 339 1e-090
gb|CV721462.1|CV721462 YBH--04-D09.b1 Rice before heading y... 339 1e-090
gb|CF282009.1|CF282009 14ETL--09-F05.b1 Rice etiolated leaf... 327 5e-087
gb|CF278982.1|CF278982 14ETL--05-B23.g1 Rice etiolated leaf... 311 3e-082
gb|CV727770.1|CV727770 14Salt--06-B09.b1 Salt treated rice ... 303 7e-080
gb|AU166181.1|AU166181 AU166181 Rice immature leaf includin... 268 4e-069
gb|CV721497.1|CV721497 YBH--04-F04.b1 Rice before heading y... 266 1e-068
gb|CV721047.1|CV721047 YBH--02-L09.b1 Rice before heading y... 262 2e-067
gb|AACV01003113.1| Oryza sativa (japonica cultivar-group) c... 252 2e-064
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 252 2e-064
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 252 2e-064
dbj|AP003277.2| Oryza sativa (japonica cultivar-group) geno... 252 2e-064
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 252 2e-064
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 252 2e-064
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 252 2e-064
gb|AU070878.1|AU070878 AU070878 Rice cDNA from young root O... 210 7e-052
gb|AU095577.1|AU095577 AU095577 Rice cDNA from young root O... 186 1e-044
gb|AU029994.1|AU029994 AU029994 Rice cDNA from immature lea... 178 3e-042
gb|AU088658.1|AU088658 AU088658 Rice green shoot Oryza sati... 170 6e-040
gb|AU092662.1|AU092662 AU092662 Rice callus Oryza sativa (j... 170 6e-040
gb|AU095902.1|AU095902 AU095902 Rice green shoot Oryza sati... 170 6e-040
gb|CA999252.1|CA999252 S234P_C07 Rice cold stress germinati... 170 6e-040
gb|CF282412.1|CF282412 14ETL--09-O18.g1 Rice etiolated leaf... 170 6e-040
gb|CF295047.1|CF295047 30DGS--04-M23.b1 Rice leaf plasmid c... 170 6e-040
gb|CF305853.1|CF305853 HDA1--01-O21.g1 OsHDAC1-overexpressi... 170 6e-040
gb|CF311153.1|CF311153 ABF--06-E08.b1 ABF3-overexpressing t... 170 6e-040
gb|CF318817.1|CF318817 HD--09-B14.b1 OsHDAC1-overexpressing... 170 6e-040
gb|CF318978.1|CF318978 HD--09-F03.g1 OsHDAC1-overexpressing... 170 6e-040
gb|CF321374.1|CF321374 HD--12-J19.b1 OsHDAC1-overexpressing... 170 6e-040
gb|CF323964.1|CF323964 HDN--05-D24.g1 OsHDAC1-overexpressin... 170 6e-040
gb|CF324621.1|CF324621 JMT1--01-A12.g1 AtJMT-overexpressing... 170 6e-040
gb|CF324999.1|CF324999 JMT1--02-A18.g1 AtJMT-overexpressing... 170 6e-040
gb|CF325902.1|CF325902 JMT1--04-I16.g1 AtJMT-overexpressing... 170 6e-040
gb|CF327804.1|CF327804 NACL--02-H02.b1 Rice callus plasmid ... 170 6e-040
gb|CF331817.1|CF331817 NACL--08-B10.g1 Rice callus plasmid ... 170 6e-040
gb|CV722495.1|CV722495 YTPSP--01-I02.b1 TPSP-overexpression... 170 6e-040
gb|CV725728.1|CV725728 14Salt--02-P08.g1 Salt treated rice ... 170 6e-040
gb|CV729036.1|CV729036 FLO--01-K18.b1 Rice flower lambda ph... 170 6e-040
dbj|AK064821.1| Oryza sativa (japonica cultivar-group) cDNA... 170 6e-040
gb|CV730074.1|CV730074 FLO--03-G23.b1 Rice flower lambda ph... 167 1e-038
gb|AU163849.1|AU163849 AU163849 Rice panicle at ripening st... 165 4e-038
gb|CA999251.1|CA999251 S234P_C06 Rice cold stress germinati... 165 4e-038
gb|CF279862.1|CF279862 14ETL--06-F04.b1 Rice etiolated leaf... 163 2e-037
gb|AU032790.1|AU032790 AU032790 Rice green shoot Oryza sati... 157 9e-036
gb|AU065333.1|AU065333 AU065333 Rice cDNA from immature lea... 157 9e-036
gb|CF315806.1|CF315806 HD--04-N19.g1 OsHDAC1-overexpressing... 157 9e-036
gb|C19903.1|C19903 C19903 Rice panicle at ripening stage Or... 151 6e-034
gb|C99605.1|C99605 C99605 Rice panicle (longer than 10cm) O... 147 9e-033
gb|CF295639.1|CF295639 30DGS--05-K19.b1 Rice leaf plasmid c... 147 9e-033
gb|D46673.1|D46673 RICS11485A Rice green shoot Oryza sativa... 145 4e-032
gb|AU092805.1|AU092805 AU092805 Rice callus Oryza sativa (j... 145 4e-032
gb|AU094584.1|AU094584 AU094584 Rice panicle at ripening st... 145 4e-032
gb|CF295640.1|CF295640 30DGS--05-K19.g1 Rice leaf plasmid c... 145 4e-032
gb|CF297391.1|CF297391 30DGS--08-D18.g1 Rice leaf plasmid c... 145 4e-032
gb|CF317599.1|CF317599 HD--07-F17.b1 OsHDAC1-overexpressing... 145 4e-032
gb|CF318818.1|CF318818 HD--09-B14.g1 OsHDAC1-overexpressing... 145 4e-032
gb|CF318977.1|CF318977 HD--09-F03.b1 OsHDAC1-overexpressing... 145 4e-032
gb|CF321375.1|CF321375 HD--12-J19.g1 OsHDAC1-overexpressing... 145 4e-032
gb|CF327805.1|CF327805 NACL--02-H02.g1 Rice callus plasmid ... 145 4e-032
gb|CF331816.1|CF331816 NACL--08-B10.b1 Rice callus plasmid ... 145 4e-032
gb|CV730359.1|CV730359 FLO--03-N20.g1 Rice flower lambda ph... 145 4e-032
gb|AC129716.3| Oryza sativa (japonica cultivar-group) chrom... 145 4e-032
gb|AACV01010748.1| Oryza sativa (japonica cultivar-group) c... 145 4e-032
ref|NT_079870.2| Oryza sativa (japonica cultivar-group) 145 4e-032
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 145 4e-032
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 145 4e-032
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 145 4e-032
gb|CF337223.1|CF337223 JMT--07-J08.g1 AtJMT-overexpressing ... 143 1e-031
gb|D48014.1|D48014 RICS13924A Rice green shoot Oryza sativa... 141 6e-031
gb|D15917.1|D15917 RICC1525A Rice callus Oryza sativa (japo... 141 6e-031
gb|CF295459.1|CF295459 30DGS--05-G19.g1 Rice leaf plasmid c... 141 6e-031
gb|C20362.1|C20362 C20362 Rice panicle at ripening stage Or... 139 2e-030
gb|C93424.1|C93424 C93424 Rice callus Oryza sativa (japonic... 137 9e-030
gb|CF295048.1|CF295048 30DGS--04-M23.g1 Rice leaf plasmid c... 137 9e-030
gb|CA999733.1|CA999733 S234I_E03 Rice cold stress germinati... 135 3e-029
gb|CF337061.1|CF337061 JMT--07-F17.g1 AtJMT-overexpressing ... 135 3e-029
gb|CV729037.1|CV729037 FLO--01-K18.g1 Rice flower lambda ph... 129 2e-027
gb|AU181087.1|AU181087 AU181087 Rice green shoot Oryza sati... 127 8e-027
gb|AU223144.1|AU223144 AU223144 Rice shoot Oryza sativa (ja... 127 8e-027
gb|CF295458.1|CF295458 30DGS--05-G19.b1 Rice leaf plasmid c... 127 8e-027
gb|C27755.1|C27755 C27755 Rice callus cDNA Oryza sativa (ja... 125 3e-026
gb|D46641.1|D46641 RICS11434A Rice green shoot Oryza sativa... 121 5e-025
gb|AU164945.1|AU164945 AU164945 Rice cDNA from immature lea... 121 5e-025
gb|AU032791.1|AU032791 AU032791 Rice green shoot Oryza sati... 119 2e-024
gb|CF317768.1|CF317768 HD--07-J08.b1 OsHDAC1-overexpressing... 113 1e-022
gb|C27590.1|C27590 C27590 Rice callus cDNA Oryza sativa (ja... 107 8e-021
gb|C28027.1|C28027 C28027 Rice callus cDNA Oryza sativa (ja... 105 3e-020
gb|CA755402.1|CA755402 BR030019000_PLATE_H09_72_079.ab1 OA ... 105 3e-020
gb|CF282411.1|CF282411 14ETL--09-O18.b1 Rice etiolated leaf... 101 5e-019
gb|AU092045.1|AU092045 AU092045 Rice callus Oryza sativa (j... 98 8e-018
gb|AU097310.1|AU097310 AU097310 Rice shoot Oryza sativa (ja... 92 5e-016
gb|AU181088.1|AU181088 AU181088 Rice green shoot Oryza sati... 88 7e-015
gb|AU066098.1|AU066098 AU066098 Rice shoot Oryza sativa (ja... 82 4e-013
gb|CA999387.1|CA999387 S234G_H11 Rice cold stress germinati... 78 7e-012
gb|CV723273.1|CV723273 root--03-A19.g1 Rice root lambda pha... 58 6e-006
gb|CV729748.1|CV729748 FLO--02-O21.b1 Rice flower lambda ph... 58 6e-006
gb|AU031260.1|AU031260 AU031260 Rice cDNA from immature lea... 52 4e-004
gb|CF281572.1|CF281572 14ETL--08-K22.b1 Rice etiolated leaf... 52 4e-004
gb|CF315935.1|CF315935 HD--05-A16.b1 OsHDAC1-overexpressing... 52 4e-004
gb|CV722203.1|CV722203 YBH--06-N05.b1 Rice before heading y... 52 4e-004
dbj|AK060133.1| Oryza sativa (japonica cultivar-group) cDNA... 52 4e-004
dbj|AK073017.1| Oryza sativa (japonica cultivar-group) cDNA... 52 4e-004
emb|AJ429043.1|OSA429043 Oryza sativa mRNA for cytochrome b... 52 4e-004
gb|CB672476.1|CB672476 OSJNEe06I12.r OSJNEe Oryza sativa (j... 44 0.098
dbj|AK066861.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.098
dbj|AP000391.2| Oryza sativa (japonica cultivar-group) geno... 44 0.098
gb|AACV01012963.1| Oryza sativa (japonica cultivar-group) c... 44 0.098
ref|XM_467062.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.098
ref|NM_185481.1| Oryza sativa (japonica cultivar-group), Oz... 44 0.098
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 44 0.098
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.098
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.098
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 44 0.098
gb|AU062481.2|AU062481 AU062481 Rice callus Oryza sativa (j... 42 0.39
gb|CB648258.1|CB648258 OSJNEb11J01.f OSJNEb Oryza sativa (j... 42 0.39
gb|AC130606.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.39
dbj|AK064854.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.39
dbj|AK066642.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.39
dbj|AK067128.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.39
dbj|AK099688.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.39
dbj|AK110548.1| Oryza sativa (japonica cultivar-group) cDNA... 42 0.39
emb|AL954364.5|CNS08CCZ Oryza sativa chromosome 12, . BAC O... 42 0.39
gb|AC108873.2| Oryza sativa (japonica cultivar-group) chrom... 42 0.39
gb|AC108498.2| Oryza sativa (japonica cultivar-group) chrom... 42 0.39
ref|NT_107151.1| Oryza sativa (japonica cultivar-group) 42 0.39
gb|AACV01003096.1| Oryza sativa (japonica cultivar-group) c... 42 0.39
gb|AACV01009228.1| Oryza sativa (japonica cultivar-group) c... 42 0.39
gb|AACV01011167.1| Oryza sativa (japonica cultivar-group) c... 42 0.39
gb|AACV01023971.1| Oryza sativa (japonica cultivar-group) c... 42 0.39
ref|NT_079856.2| Oryza sativa (japonica cultivar-group) 42 0.39
ref|NT_107217.1| Oryza sativa (japonica cultivar-group) 42 0.39
ref|NT_107225.1| Oryza sativa (japonica cultivar-group) 42 0.39
ref|XM_507080.1| PREDICTED Oryza sativa (japonica cultivar-... 42 0.39
ref|XM_507081.1| PREDICTED Oryza sativa (japonica cultivar-... 42 0.39
gb|AC130604.4| Oryza sativa (japonica cultivar-group) chrom... 42 0.39
dbj|AP003448.3| Oryza sativa (japonica cultivar-group) geno... 42 0.39
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.39
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.39
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.39
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.39
emb|AL731609.2|OSJN00259 Oryza sativa genomic DNA, chromoso... 42 0.39
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 42 0.39
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 42 0.39
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 42 0.39
>gb|AU070938.1|AU070938 AU070938 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10487_1A, mRNA sequence
Length = 713
Score = 420 bits (212), Expect = e-115
Identities = 344/388 (88%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
|||| ||||| || ||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 599 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 540
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 539 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 480
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| || ||||| |||||||||||||||||||| |||||||||||| || ||||| || |
Sbjct: 479 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 420
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| ||||| |||||||| || || || |||||||||||||||||||||||||| |
Sbjct: 419 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 360
Query: 465 catcggtagcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcct 524
| |||||||||||||||||||| ||||||| || ||||||||||||||||||||| ||||
Sbjct: 359 cgtcggtagcatccttggcagtcgaagacaacaagacatcatcacctccagggtgatcct 300
Query: 525 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttgg 584
||| ||||||||||||||||||||||||||||||||||| ||||||||| || |||||||
Sbjct: 299 ccaaaaacttggtcacattgtacaccttgccgccgatgatgagccagcaatcgtccttgg 240
Query: 585 tgttgtgcttggccacctcctcaagggt 612
|||||||||||| |||||||| |||||
Sbjct: 239 tgttgtgcttggagacctcctccagggt 212
>gb|CF282010.1|CF282010 14ETL--09-F05.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--09-F05, mRNA sequence
Length = 634
Score = 420 bits (212), Expect = e-115
Identities = 344/388 (88%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
|||| ||||| || ||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 583 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 524
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 523 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 464
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| || ||||| |||||||||||||||||||| |||||||||||| || ||||| || |
Sbjct: 463 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 404
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| ||||| |||||||| || || || |||||||||||||||||||||||||| |
Sbjct: 403 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 344
Query: 465 catcggtagcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcct 524
| |||||||||||||||||||| ||||||| || ||||||||||||||||||||| ||||
Sbjct: 343 cgtcggtagcatccttggcagtcgaagacaacaagacatcatcacctccagggtgatcct 284
Query: 525 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttgg 584
||| ||||||||||||||||||||||||||||||||||| ||||||||| || |||||||
Sbjct: 283 ccaaaaacttggtcacattgtacaccttgccgccgatgatgagccagcaatcgtccttgg 224
Query: 585 tgttgtgcttggccacctcctcaagggt 612
|||||||||||| |||||||| |||||
Sbjct: 223 tgttgtgcttggagacctcctccagggt 196
>gb|CF326470.1|CF326470 JMT1--06-C11.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--06-C11, mRNA sequence
Length = 596
Score = 420 bits (212), Expect = e-115
Identities = 344/388 (88%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
|||| ||||| || ||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 595 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 536
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 535 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 476
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| || ||||| |||||||||||||||||||| |||||||||||| || ||||| || |
Sbjct: 475 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 416
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| ||||| |||||||| || || || |||||||||||||||||||||||||| |
Sbjct: 415 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 356
Query: 465 catcggtagcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcct 524
| |||||||||||||||||||| ||||||| || ||||||||||||||||||||| ||||
Sbjct: 355 cgtcggtagcatccttggcagtcgaagacaacaagacatcatcacctccagggtgatcct 296
Query: 525 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttgg 584
||| ||||||||||||||||||||||||||||||||||| ||||||||| || |||||||
Sbjct: 295 ccaaaaacttggtcacattgtacaccttgccgccgatgatgagccagcaatcgtccttgg 236
Query: 585 tgttgtgcttggccacctcctcaagggt 612
|||||||||||| |||||||| |||||
Sbjct: 235 tgttgtgcttggagacctcctccagggt 208
>dbj|AK120840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022G15, full
insert sequence
Length = 764
Score = 420 bits (212), Expect = e-115
Identities = 344/388 (88%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
|||| ||||| || ||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 600 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 541
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 540 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 481
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| || ||||| |||||||||||||||||||| |||||||||||| || ||||| || |
Sbjct: 480 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 421
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| ||||| |||||||| || || || |||||||||||||||||||||||||| |
Sbjct: 420 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 361
Query: 465 catcggtagcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcct 524
| |||||||||||||||||||| ||||||| || ||||||||||||||||||||| ||||
Sbjct: 360 cgtcggtagcatccttggcagtcgaagacaacaagacatcatcacctccagggtgatcct 301
Query: 525 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttgg 584
||| ||||||||||||||||||||||||||||||||||| ||||||||| || |||||||
Sbjct: 300 ccaaaaacttggtcacattgtacaccttgccgccgatgatgagccagcaatcgtccttgg 241
Query: 585 tgttgtgcttggccacctcctcaagggt 612
|||||||||||| |||||||| |||||
Sbjct: 240 tgttgtgcttggagacctcctccagggt 213
>ref|NM_189457.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 408
Score = 418 bits (211), Expect = e-114
Identities = 340/383 (88%)
Strand = Plus / Minus
Query: 230 gcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgccaggggg 289
||||| || ||||||||||||||||||||||||||||||| |||| ||| |||| |||
Sbjct: 404 gcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgccaaggga 345
Query: 290 accaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagtgcggc 349
||||||||||||||||||||||||| |||||| || |||||||||||||||||||| ||
Sbjct: 344 accaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagtgtggt 285
Query: 350 tgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcaccgacg 409
||||| |||||||||||||||||||| |||||||||||| || ||||| || |||||
Sbjct: 284 tgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgccgaca 225
Query: 410 aggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcg 469
||||| |||||||| || || || |||||||||||||||||||||||||| || |||
Sbjct: 224 taatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagtcgtcg 165
Query: 470 gtagcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccaga 529
||||||||||||||||| ||||||| || ||||||||||||||||||||| ||||||| |
Sbjct: 164 gtagcatccttggcagtcgaagacaacaagacatcatcacctccagggtgatcctccaaa 105
Query: 530 aacttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttg 589
|||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||
Sbjct: 104 aacttggtcacattgtacaccttgccgccgatgatgagccagcaatcgtccttggtgttg 45
Query: 590 tgcttggccacctcctcaagggt 612
||||||| |||||||| |||||
Sbjct: 44 tgcttggagacctcctccagggt 22
>gb|AU085750.1|AU085750 AU085750 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52309, mRNA sequence
Length = 695
Score = 412 bits (208), Expect = e-112
Identities = 343/388 (88%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
|||| ||||| || ||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 516 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 457
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||| ||||||||||||| ||||||||||| |||||| || |||||||||||||||||||
Sbjct: 456 agggaaccaaaaactggaagatcttgatgatgaactctggtgtcttatcctggttgtagt 397
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| || ||||| |||||||||||||||||||| |||||||||||| || ||||| || |
Sbjct: 396 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 337
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| ||||| |||||||| || || || |||||||||||||||||||||||||| |
Sbjct: 336 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 277
Query: 465 catcggtagcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcct 524
| |||||||||||||||||||| ||||||| || ||||||||||||||||||||| ||||
Sbjct: 276 cgtcggtagcatccttggcagtcgaagacaacaagacatcatcacctccagggtgatcct 217
Query: 525 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttgg 584
||| ||||||||||||||||||||||||||||||||||| ||||||||| || |||||||
Sbjct: 216 ccaaaaacttggtcacattgtacaccttgccgccgatgatgagccagcaatcgtccttgg 157
Query: 585 tgttgtgcttggccacctcctcaagggt 612
|||||||||||| |||||||| |||||
Sbjct: 156 tgttgtgcttggagacctcctccagggt 129
>gb|AU164215.1|AU164215 AU164215 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20763, mRNA sequence
Length = 694
Score = 412 bits (208), Expect = e-112
Identities = 331/372 (88%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
|||| ||||| || ||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 524 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 465
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 464 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 405
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| || ||||| |||||||||||||||||||| |||||||||||| || ||||| || |
Sbjct: 404 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 345
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| ||||| |||||||| || || || |||||||||||||||||||||||||| |
Sbjct: 344 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 285
Query: 465 catcggtagcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcct 524
| |||||||||||||||||||| ||||||| || ||||||||||||||||||||| ||||
Sbjct: 284 cgtcggtagcatccttggcagtcgaagacaacaagacatcatcacctccagggtgatcct 225
Query: 525 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttgg 584
||| ||||||||||||||||||||||||||||||||||| ||||||||| || |||||||
Sbjct: 224 ccaaaaacttggtcacattgtacaccttgccgccgatgatgagccagcaatcgtccttgg 165
Query: 585 tgttgtgcttgg 596
||||||||||||
Sbjct: 164 tgttgtgcttgg 153
>gb|CF278981.1|CF278981 14ETL--05-B23.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--05-B23, mRNA sequence
Length = 620
Score = 398 bits (201), Expect = e-108
Identities = 343/389 (88%), Gaps = 1/389 (0%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagcc-aggcccagtattgcc 283
|||| ||||| || |||||||||||||||||||||||||||||| | |||| ||| |||
Sbjct: 619 actaagcagactctgacttggtgtagatccttacagcaacagcccaatcccaatatcgcc 560
Query: 284 agggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtag 343
| ||| ||||||||||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 559 aagggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtag 500
Query: 344 tgcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctca 403
|| || ||||| |||||||||||||||||||| |||||||||||| || |||| ||
Sbjct: 499 tgtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgacaatgtcg 440
Query: 404 ccgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaa 463
||||| ||||| |||||||| || || || ||||||||||||||||||||||||||
Sbjct: 439 ccgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaag 380
Query: 464 tcatcggtagcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcc 523
|| |||||||||||||||||||| ||||||| || ||||||||||||||||||||| |||
Sbjct: 379 tcgtcggtagcatccttggcagtcgaagacaacaagacatcatcacctccagggtgatcc 320
Query: 524 tccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttg 583
|||| ||||||||||||||||||||||||||||||||||| ||||||||| || ||||||
Sbjct: 319 tccaaaaacttggtcacattgtacaccttgccgccgatgatgagccagcaatcgtccttg 260
Query: 584 gtgttgtgcttggccacctcctcaagggt 612
||||||||||||| |||||||| |||||
Sbjct: 259 gtgttgtgcttggagacctcctccagggt 231
>gb|CF196126.1|CF196126 Azvi1.1_E10 AZ-VI Oryza sativa (japonica cultivar-group) cDNA clone
AZ-VI1.1E10 5', mRNA sequence
Length = 596
Score = 392 bits (198), Expect = e-107
Identities = 328/373 (87%)
Strand = Plus / Minus
Query: 240 acttggtgtagatccttacagcaacagccaggcccagtattgccagggggaccaaaaact 299
|||||||||||||||||||||| ||||| |||| ||| |||| ||| ||||||||||
Sbjct: 577 acttggtgtagatccttacagcnnnagccaatcccaatatcgccaagggaaccaaaaact 518
Query: 300 ggaggatcttgatgacgaactccggggtcttatcctggttgtagtgcggctgcttggggg 359
||||||||||||||| ||||| || |||||||||||||||||||| || ||||| ||||
Sbjct: 517 ggaggatcttgatgatgaactnnggtgtcttatcctggttgtagtgtggttgcttcgggg 458
Query: 360 gcgtgtacttcaccttactgggtatcgtggccgcatcaatctcaccgacgaggtactcgt 419
|||||||||||||||| |||||||||||| || ||||| || ||||| ||||| |
Sbjct: 457 gcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgccgacataatactcat 398
Query: 420 ccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggtagcatcct 479
||||||| || || || |||||||||||||||||||||||||| || |||||||||||||
Sbjct: 397 ccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagtcgtcggtagcatcct 338
Query: 480 tggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaacttggtca 539
||||||| ||||||| || ||||||||||||||||||||| ||||||| |||||||||||
Sbjct: 337 tggcagtcgaagacaacaagacatcatcacctccagggtgatcctccaaaaacttggtca 278
Query: 540 cattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgcttggcca 599
|||||||||||||||||||||||| ||||||||| || ||||||||||||||||||| |
Sbjct: 277 cattgtacaccttgccgccgatgatgagccagcaatcgtccttggtgttgtgcttggaga 218
Query: 600 cctcctcaagggt 612
||||||| |||||
Sbjct: 217 cctcctccagggt 205
>gb|CF311012.1|CF311012 ABF--06-B02.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--06-B02, mRNA sequence
Length = 525
Score = 363 bits (183), Expect = 8e-098
Identities = 300/339 (88%)
Strand = Plus / Plus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
|||| ||||| || ||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 183 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 242
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 243 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 302
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| || ||||| |||||||||||||||||||| |||||||||||| || ||||| || |
Sbjct: 303 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 362
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| ||||| |||||||| || || || ||||||||||||||||||||| |||| |
Sbjct: 363 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatctccgaagt 422
Query: 465 catcggtagcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcct 524
| |||||||||||||||||||| ||||||| || ||||||||||||||||||||| ||||
Sbjct: 423 cgtcggtagcatccttggcagtcgaagacaacaagacatcatcacctccagggtgatcct 482
Query: 525 ccagaaacttggtcacattgtacaccttgccgccgatga 563
||| |||||||||||||||||||||||||||||||||||
Sbjct: 483 ccaaaaacttggtcacattgtacaccttgccgccgatga 521
>gb|AU095591.1|AU095591 AU095591 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10487, mRNA sequence
Length = 617
Score = 339 bits (171), Expect = 1e-090
Identities = 323/373 (86%), Gaps = 2/373 (0%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
|||| ||||| || ||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 437 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 378
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 377 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 318
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| || ||||| |||||||||||||||||||| |||||||||||| || ||||| || |
Sbjct: 317 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 258
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| ||||| |||||||| || || || |||||||||||||||| ||||||||| |
Sbjct: 257 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccanatcttcgaagt 198
Query: 465 catcggtagcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcct 524
| |||||||||||||||| ||| ||||| | || |||||||||| |||||||| | ||||
Sbjct: 197 cgtcggtagcatccttggnagtcgaaganaacaagacatcatcanctccagggggatcct 138
Query: 525 cc-agaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttg 583
|| | |||||||||||||||||| |||||||||||||||| ||||||||| | | ||||
Sbjct: 137 ccaaaaaacttggtcacattgtanaccttgccgccgatgatgagccagcaatngt-cttg 79
Query: 584 gtgttgtgcttgg 596
|||||||||||||
Sbjct: 78 gtgttgtgcttgg 66
>gb|CV721462.1|CV721462 YBH--04-D09.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--04-D09, mRNA sequence
Length = 447
Score = 339 bits (171), Expect = 1e-090
Identities = 276/311 (88%)
Strand = Plus / Minus
Query: 302 aggatcttgatgacgaactccggggtcttatcctggttgtagtgcggctgcttggggggc 361
||||||||||||| |||||| || |||||||||||||||||||| || ||||| ||||||
Sbjct: 447 aggatcttgatgatgaactctggtgtcttatcctggttgtagtgtggttgcttcgggggc 388
Query: 362 gtgtacttcaccttactgggtatcgtggccgcatcaatctcaccgacgaggtactcgtcc 421
|||||||||||||| |||||||||||| || ||||| || ||||| ||||| |||
Sbjct: 387 gtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgccgacataatactcatcc 328
Query: 422 atcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggtagcatccttg 481
||||| || || || |||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 327 atcatcgcccgagcagtggtgctgtgccccacatcttcgaagtcgtcggtagcatccttg 268
Query: 482 gcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaacttggtcaca 541
||||| ||||||| || ||||||||||||||||||||| ||||||| |||||||||||||
Sbjct: 267 gcagtcgaagacaacaagacatcatcacctccagggtgatcctccaaaaacttggtcaca 208
Query: 542 ttgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgcttggccacc 601
|||||||||||||||||||||| ||||||||| || ||||||||||||||||||| |||
Sbjct: 207 ttgtacaccttgccgccgatgatgagccagcaatcgtccttggtgttgtgcttggagacc 148
Query: 602 tcctcaagggt 612
||||| |||||
Sbjct: 147 tcctccagggt 137
>gb|CF282009.1|CF282009 14ETL--09-F05.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--09-F05, mRNA sequence
Length = 497
Score = 327 bits (165), Expect = 5e-087
Identities = 299/341 (87%), Gaps = 2/341 (0%)
Strand = Plus / Plus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
|||| ||||| || ||||||||||| ||||||||||||||||||| |||| ||| ||||
Sbjct: 155 actaagcagactctgacttggtgtaaatccttacagcaacagccaatcccaatatcgcca 214
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 215 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 274
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| || ||||| |||||||||||||||||||| |||||||||||| || ||||| || |
Sbjct: 275 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 334
Query: 405 cgacgaggtactcgtccatcattgcacgggcggt-ggtgctgtgccccacatcttcgaaa 463
|||| ||||| |||||||| || || || || ||||||||||||||||||||| ||
Sbjct: 335 cgacataatactcatccatcatcgcccgagcagtgggtgctgtgccccacatcttcaaag 394
Query: 464 tcatcggtagcatccttggcagtggaagacagcaggacatcatcacctcca-gggtggtc 522
|| |||||||||||||||||||| ||||||| || |||||||||||||||| ||||| ||
Sbjct: 395 tcgtcggtagcatccttggcagtcgaagacaacaagacatcatcacctccaggggtgatc 454
Query: 523 ctccagaaacttggtcacattgtacaccttgccgccgatga 563
||||| |||||||||||||||||||||||||||||||||||
Sbjct: 455 ctccaaaaacttggtcacattgtacaccttgccgccgatga 495
>gb|CF278982.1|CF278982 14ETL--05-B23.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--05-B23, mRNA sequence
Length = 520
Score = 311 bits (157), Expect = 3e-082
Identities = 296/340 (87%), Gaps = 2/340 (0%)
Strand = Plus / Plus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
|||| ||||| || |||||||||||||||| | || |||||||| |||| ||| ||||
Sbjct: 180 actaagcagactctgacttggtgtagatccntt-agtaacagccaatcccaatatcgcca 238
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 239 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 298
Query: 345 gcggctgcttggggggcgtgtac-ttcaccttactgggtatcgtggccgcatcaatctca 403
| || ||||| |||||||||||| |||||||| |||||||||||| || |||| ||
Sbjct: 299 gtggttgcttcgggggcgtgtacattcaccttggtgggtatcgtggttgcgacaatgtcg 358
Query: 404 ccgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaa 463
||||| ||||| |||||||| || || || ||||||||||||||||||||||||||
Sbjct: 359 ccgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaag 418
Query: 464 tcatcggtagcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcc 523
|| |||||||||||||||||||| ||||||| || ||||||||||||||||||||| |||
Sbjct: 419 tcgtcggtagcatccttggcagtcgaagacaacaagacatcatcacctccagggtgatcc 478
Query: 524 tccagaaacttggtcacattgtacaccttgccgccgatga 563
|||| |||||||||||||||||||||||||||||||||||
Sbjct: 479 tccaaaaacttggtcacattgtacaccttgccgccgatga 518
>gb|CV727770.1|CV727770 14Salt--06-B09.b1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--06-B09, mRNA sequence
Length = 475
Score = 303 bits (153), Expect = 7e-080
Identities = 264/301 (87%)
Strand = Plus / Plus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
|||| ||||| || ||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 175 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 234
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 235 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 294
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| || ||||| |||||||||||||||||||| |||||||||||| || ||||| || |
Sbjct: 295 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 354
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| ||||| |||||||| || || || |||||||||||||||||||||||||| |
Sbjct: 355 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 414
Query: 465 catcggtagcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcct 524
| |||||||||||||||||||| ||||||| || ||||||||||||||||||||| ||||
Sbjct: 415 cgtcggtagcatccttggcagtcgaagacaacaagacatcatcacctccagggtgatcct 474
Query: 525 c 525
|
Sbjct: 475 c 475
>gb|AU166181.1|AU166181 AU166181 Rice immature leaf including apical meristem (under long
day condition) Oryza sativa (japonica cultivar-group)
cDNA clone E50445, mRNA sequence
Length = 458
Score = 268 bits (135), Expect = 4e-069
Identities = 243/279 (87%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
|||| ||||| || ||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 279 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 220
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 219 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 160
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| || ||||| |||||||||||||||||||| |||||||||||| || ||||| || |
Sbjct: 159 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 100
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| ||||| |||||||| || || || |||||||||||||||||||||||||| |
Sbjct: 99 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 40
Query: 465 catcggtagcatccttggcagtggaagacagcaggacat 503
| |||||||||||||||||||| ||||||| || |||||
Sbjct: 39 cgtcggtagcatccttggcagtcgaagacaacaagacat 1
>gb|CV721497.1|CV721497 YBH--04-F04.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--04-F04, mRNA sequence
Length = 455
Score = 266 bits (134), Expect = 1e-068
Identities = 236/270 (87%)
Strand = Plus / Plus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
|||| ||||| || ||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 178 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 237
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 238 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 297
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| || ||||| |||||||||||||||||||| |||||||||||| || ||||| || |
Sbjct: 298 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 357
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| ||||| |||||||| || || || |||||||||||||||||||||||||| |
Sbjct: 358 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 417
Query: 465 catcggtagcatccttggcagtggaagaca 494
| |||||||||||||||||||| |||||||
Sbjct: 418 cgtcggtagcatccttggcagtcgaagaca 447
>gb|CV721047.1|CV721047 YBH--02-L09.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--02-L09, mRNA sequence
Length = 372
Score = 262 bits (132), Expect = 2e-067
Identities = 183/200 (91%)
Strand = Plus / Minus
Query: 413 tactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggta 472
||||| |||||||| || || || |||||||||||||||||||||||||| || ||||||
Sbjct: 336 tactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagtcgtcggta 277
Query: 473 gcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaac 532
|||||||||||||||||||||| || ||||||||||||||||||||| ||||||| ||||
Sbjct: 276 gcatccttggcagtggaagacaacaagacatcatcacctccagggtgatcctccaaaaac 217
Query: 533 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgc 592
||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||
Sbjct: 216 ttggtcacattgtacaccttgccgccgatgatgagccagcaatcgtccttggtgttgtgc 157
Query: 593 ttggccacctcctcaagggt 612
|||| |||||||| |||||
Sbjct: 156 ttggagacctcctccagggt 137
>gb|AACV01003113.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg003113, whole
genome shotgun sequence
Length = 38240
Score = 252 bits (127), Expect = 2e-064
Identities = 226/259 (87%)
Strand = Plus / Plus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
|||| ||||| || ||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 27689 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 27748
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 27749 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 27808
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| || ||||| |||||||||||||||||||| |||||||||||| || ||||| || |
Sbjct: 27809 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 27868
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| ||||| |||||||| || || || |||||||||||||||||||||||||| |
Sbjct: 27869 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 27928
Query: 465 catcggtagcatccttggc 483
| |||||||||||||||||
Sbjct: 27929 cgtcggtagcatccttggc 27947
Score = 97.6 bits (49), Expect = 8e-018
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 483 cagtggaagacagcaggacatcatcacctccagggtggtcctccagaaacttggtcacat 542
|||| ||||||| || ||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 28037 cagtcgaagacaacaagacatcatcacctccagggtgatcctccaaaaacttggtcacat 28096
Query: 543 tgtacacct 551
|||||||||
Sbjct: 28097 tgtacacct 28105
Score = 81.8 bits (41), Expect = 4e-013
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 548 accttgccgccgatgacgagccagcagtcatccttggtgttgtgcttggccacctcctca 607
|||||||||||||||| ||||||||| || ||||||||||||||||||| ||||||||
Sbjct: 28867 accttgccgccgatgatgagccagcaatcgtccttggtgttgtgcttggagacctcctcc 28926
Query: 608 agggt 612
|||||
Sbjct: 28927 agggt 28931
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 252 bits (127), Expect = 2e-064
Identities = 226/259 (87%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
|||| ||||| || ||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 42933263 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 42933204
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 42933203 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 42933144
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| || ||||| |||||||||||||||||||| |||||||||||| || ||||| || |
Sbjct: 42933143 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 42933084
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| ||||| |||||||| || || || |||||||||||||||||||||||||| |
Sbjct: 42933083 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 42933024
Query: 465 catcggtagcatccttggc 483
| |||||||||||||||||
Sbjct: 42933023 cgtcggtagcatccttggc 42933005
Score = 97.6 bits (49), Expect = 8e-018
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 483 cagtggaagacagcaggacatcatcacctccagggtggtcctccagaaacttggtcacat 542
|||| ||||||| || ||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 42932915 cagtcgaagacaacaagacatcatcacctccagggtgatcctccaaaaacttggtcacat 42932856
Query: 543 tgtacacct 551
|||||||||
Sbjct: 42932855 tgtacacct 42932847
Score = 81.8 bits (41), Expect = 4e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 548 accttgccgccgatgacgagccagcagtcatccttggtgttgtgcttggccacctcctca 607
|||||||||||||||| ||||||||| || ||||||||||||||||||| ||||||||
Sbjct: 42932085 accttgccgccgatgatgagccagcaatcgtccttggtgttgtgcttggagacctcctcc 42932026
Query: 608 agggt 612
|||||
Sbjct: 42932025 agggt 42932021
Score = 42.1 bits (21), Expect = 0.39
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 633 tcctcctcttcctcttcctct 653
|||||||||||||||||||||
Sbjct: 42758211 tcctcctcttcctcttcctct 42758191
>ref|NT_079923.2| Oryza sativa (japonica cultivar-group)
Length = 2970704
Score = 252 bits (127), Expect = 2e-064
Identities = 226/259 (87%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
|||| ||||| || ||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 2561557 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 2561498
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 2561497 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 2561438
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| || ||||| |||||||||||||||||||| |||||||||||| || ||||| || |
Sbjct: 2561437 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 2561378
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| ||||| |||||||| || || || |||||||||||||||||||||||||| |
Sbjct: 2561377 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 2561318
Query: 465 catcggtagcatccttggc 483
| |||||||||||||||||
Sbjct: 2561317 cgtcggtagcatccttggc 2561299
Score = 97.6 bits (49), Expect = 8e-018
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 483 cagtggaagacagcaggacatcatcacctccagggtggtcctccagaaacttggtcacat 542
|||| ||||||| || ||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 2561209 cagtcgaagacaacaagacatcatcacctccagggtgatcctccaaaaacttggtcacat 2561150
Query: 543 tgtacacct 551
|||||||||
Sbjct: 2561149 tgtacacct 2561141
Score = 81.8 bits (41), Expect = 4e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 548 accttgccgccgatgacgagccagcagtcatccttggtgttgtgcttggccacctcctca 607
|||||||||||||||| ||||||||| || ||||||||||||||||||| ||||||||
Sbjct: 2560379 accttgccgccgatgatgagccagcaatcgtccttggtgttgtgcttggagacctcctcc 2560320
Query: 608 agggt 612
|||||
Sbjct: 2560319 agggt 2560315
Score = 42.1 bits (21), Expect = 0.39
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 633 tcctcctcttcctcttcctct 653
|||||||||||||||||||||
Sbjct: 2386505 tcctcctcttcctcttcctct 2386485
>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0518C01
Length = 173555
Score = 252 bits (127), Expect = 2e-064
Identities = 226/259 (87%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
|||| ||||| || ||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 46327 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 46268
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 46267 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 46208
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| || ||||| |||||||||||||||||||| |||||||||||| || ||||| || |
Sbjct: 46207 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 46148
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| ||||| |||||||| || || || |||||||||||||||||||||||||| |
Sbjct: 46147 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 46088
Query: 465 catcggtagcatccttggc 483
| |||||||||||||||||
Sbjct: 46087 cgtcggtagcatccttggc 46069
Score = 97.6 bits (49), Expect = 8e-018
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 483 cagtggaagacagcaggacatcatcacctccagggtggtcctccagaaacttggtcacat 542
|||| ||||||| || ||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 45979 cagtcgaagacaacaagacatcatcacctccagggtgatcctccaaaaacttggtcacat 45920
Query: 543 tgtacacct 551
|||||||||
Sbjct: 45919 tgtacacct 45911
Score = 81.8 bits (41), Expect = 4e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 548 accttgccgccgatgacgagccagcagtcatccttggtgttgtgcttggccacctcctca 607
|||||||||||||||| ||||||||| || ||||||||||||||||||| ||||||||
Sbjct: 45149 accttgccgccgatgatgagccagcaatcgtccttggtgttgtgcttggagacctcctcc 45090
Query: 608 agggt 612
|||||
Sbjct: 45089 agggt 45085
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 252 bits (127), Expect = 2e-064
Identities = 226/259 (87%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
|||| ||||| || ||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 17019813 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 17019754
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 17019753 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 17019694
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| || ||||| |||||||||||||||||||| |||||||||||| || ||||| || |
Sbjct: 17019693 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 17019634
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| ||||| |||||||| || || || |||||||||||||||||||||||||| |
Sbjct: 17019633 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 17019574
Query: 465 catcggtagcatccttggc 483
| |||||||||||||||||
Sbjct: 17019573 cgtcggtagcatccttggc 17019555
Score = 97.6 bits (49), Expect = 8e-018
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 483 cagtggaagacagcaggacatcatcacctccagggtggtcctccagaaacttggtcacat 542
|||| ||||||| || ||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 17019465 cagtcgaagacaacaagacatcatcacctccagggtgatcctccaaaaacttggtcacat 17019406
Query: 543 tgtacacct 551
|||||||||
Sbjct: 17019405 tgtacacct 17019397
Score = 81.8 bits (41), Expect = 4e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 548 accttgccgccgatgacgagccagcagtcatccttggtgttgtgcttggccacctcctca 607
|||||||||||||||| ||||||||| || ||||||||||||||||||| ||||||||
Sbjct: 17018635 accttgccgccgatgatgagccagcaatcgtccttggtgttgtgcttggagacctcctcc 17018576
Query: 608 agggt 612
|||||
Sbjct: 17018575 agggt 17018571
Score = 42.1 bits (21), Expect = 0.39
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 633 tcctcctcttcctcttcctct 653
|||||||||||||||||||||
Sbjct: 16865913 tcctcctcttcctcttcctct 16865893
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 252 bits (127), Expect = 2e-064
Identities = 226/259 (87%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
|||| ||||| || ||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 42221534 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 42221475
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 42221474 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 42221415
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| || ||||| |||||||||||||||||||| |||||||||||| || ||||| || |
Sbjct: 42221414 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 42221355
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| ||||| |||||||| || || || |||||||||||||||||||||||||| |
Sbjct: 42221354 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 42221295
Query: 465 catcggtagcatccttggc 483
| |||||||||||||||||
Sbjct: 42221294 cgtcggtagcatccttggc 42221276
Score = 97.6 bits (49), Expect = 8e-018
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 483 cagtggaagacagcaggacatcatcacctccagggtggtcctccagaaacttggtcacat 542
|||| ||||||| || ||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 42221186 cagtcgaagacaacaagacatcatcacctccagggtgatcctccaaaaacttggtcacat 42221127
Query: 543 tgtacacct 551
|||||||||
Sbjct: 42221126 tgtacacct 42221118
Score = 81.8 bits (41), Expect = 4e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 548 accttgccgccgatgacgagccagcagtcatccttggtgttgtgcttggccacctcctca 607
|||||||||||||||| ||||||||| || ||||||||||||||||||| ||||||||
Sbjct: 42220356 accttgccgccgatgatgagccagcaatcgtccttggtgttgtgcttggagacctcctcc 42220297
Query: 608 agggt 612
|||||
Sbjct: 42220296 agggt 42220292
Score = 42.1 bits (21), Expect = 0.39
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 633 tcctcctcttcctcttcctct 653
|||||||||||||||||||||
Sbjct: 42067634 tcctcctcttcctcttcctct 42067614
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 252 bits (127), Expect = 2e-064
Identities = 226/259 (87%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
|||| ||||| || ||||||||||||||||||||||||||||||| |||| ||| ||||
Sbjct: 42852593 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 42852534
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 42852533 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 42852474
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtggccgcatcaatctcac 404
| || ||||| |||||||||||||||||||| |||||||||||| || ||||| || |
Sbjct: 42852473 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 42852414
Query: 405 cgacgaggtactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaat 464
|||| ||||| |||||||| || || || |||||||||||||||||||||||||| |
Sbjct: 42852413 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 42852354
Query: 465 catcggtagcatccttggc 483
| |||||||||||||||||
Sbjct: 42852353 cgtcggtagcatccttggc 42852335
Score = 97.6 bits (49), Expect = 8e-018
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 483 cagtggaagacagcaggacatcatcacctccagggtggtcctccagaaacttggtcacat 542
|||| ||||||| || ||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 42852245 cagtcgaagacaacaagacatcatcacctccagggtgatcctccaaaaacttggtcacat 42852186
Query: 543 tgtacacct 551
|||||||||
Sbjct: 42852185 tgtacacct 42852177
Score = 81.8 bits (41), Expect = 4e-013
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 548 accttgccgccgatgacgagccagcagtcatccttggtgttgtgcttggccacctcctca 607
|||||||||||||||| ||||||||| || ||||||||||||||||||| ||||||||
Sbjct: 42851415 accttgccgccgatgatgagccagcaatcgtccttggtgttgtgcttggagacctcctcc 42851356
Query: 608 agggt 612
|||||
Sbjct: 42851355 agggt 42851351
Score = 42.1 bits (21), Expect = 0.39
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 633 tcctcctcttcctcttcctct 653
|||||||||||||||||||||
Sbjct: 42677541 tcctcctcttcctcttcctct 42677521
>gb|AU070878.1|AU070878 AU070878 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10408_1A, mRNA sequence
Length = 388
Score = 210 bits (106), Expect = 7e-052
Identities = 161/177 (90%), Gaps = 2/177 (1%)
Strand = Plus / Minus
Query: 438 tggtgctgtgccccacatcttcgaaatcatcggtagcatccttggc-agtggaagac-ag 495
||||||||||||||||||||||||| || ||||||||||||||||| ||| |||||| |
Sbjct: 388 tggtgctgtgccccacatcttcgaagtcgtcggtagcatccttggccagtcgaagaccaa 329
Query: 496 caggacatcatcacctccagggtggtcctccagaaacttggtcacattgtacaccttgcc 555
|| | ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 328 caagncatcatcacctccagggtgatcctccaaaaacttggtcacattgtacaccttgcc 269
Query: 556 gccgatgacgagccagcagtcatccttggtgttgtgcttggccacctcctcaagggt 612
|||||||| ||||||||| || ||||||||||||||||||| |||||||| |||||
Sbjct: 268 gccgatgatgagccagcaatcgtccttggtgttgtgcttggagacctcctccagggt 212
>gb|AU095577.1|AU095577 AU095577 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10408, mRNA sequence
Length = 382
Score = 186 bits (94), Expect = 1e-044
Identities = 147/165 (89%)
Strand = Plus / Minus
Query: 225 actaggcagattccgacttggtgtagatccttacagcaacagccaggcccagtattgcca 284
|||| ||||| || ||||||||||||||||||||||||||||||| |||| ||| || |
Sbjct: 202 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcna 143
Query: 285 gggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtagt 344
||| ||||||||||||||||||||||||| |||||| || |||||||||||||||||||
Sbjct: 142 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 83
Query: 345 gcggctgcttggggggcgtgtacttcaccttactgggtatcgtgg 389
| || ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 82 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtgg 38
>gb|AU029994.1|AU029994 AU029994 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E50445_1A, mRNA sequence
Length = 366
Score = 178 bits (90), Expect = 3e-042
Identities = 163/181 (90%), Gaps = 6/181 (3%)
Strand = Plus / Minus
Query: 437 gtggtgctgtgcccc--acatcttcgaaa-tcatcggtagca-tccttggca-gtggaag 491
||||||||||||||| |||| ||||||| || ||||||||| ||||||||| || ||||
Sbjct: 277 gtggtgctgtgcccccaacat-ttcgaaagtcgtcggtagcaatccttggcaagtcgaag 219
Query: 492 acagcaggacatcatcacctccagggtggtcctccagaaacttggtcacattgtacacct 551
||| || ||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 218 acaacaagacatcatcacctccagggtgatcctccaaaaacttggtcacattgtacacct 159
Query: 552 tgccgccgatgacgagccagcagtcatccttggtgttgtgcttggccacctcctcaaggg 611
|||||||||||| ||||||||| || ||||||||||||||||||| |||||||| ||||
Sbjct: 158 tgccgccgatgatgagccagcaatcgtccttggtgttgtgcttggagacctcctccaggg 99
Query: 612 t 612
|
Sbjct: 98 t 98
>gb|AU088658.1|AU088658 AU088658 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11434, mRNA sequence
Length = 712
Score = 170 bits (86), Expect = 6e-040
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 413 tactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggta 472
||||| |||||||| ||||| || || ||||||||||| ||||| || ||||| || ||
Sbjct: 268 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 209
Query: 473 gcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaac 532
|| |||||| |||| ||||| |||| ||||||||||||||| || |||||||| || ||
Sbjct: 208 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 149
Query: 533 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgc 592
|| | ||||||||| ||||| |||||||||| |||||||||||| ||||||| |||||||
Sbjct: 148 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 89
Query: 593 ttggccacctcctcaagggtgtacaccttc 622
||||| |||||||| ||||| |||||||||
Sbjct: 88 ttggcgacctcctccagggtatacaccttc 59
Score = 145 bits (73), Expect = 4e-032
Identities = 112/125 (89%)
Strand = Plus / Minus
Query: 236 tccgacttggtgtagatccttacagcaacagccaggcccagtattgccagggggaccaaa 295
|||||||||||||||||||| | |||||||||||||||| ||| || ||||| |||||
Sbjct: 445 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 386
Query: 296 aactggaggatcttgatgacgaactccggggtcttatcctggttgtagtgcggctgcttg 355
||||||||||||||||||| ||||||||||||||| |||||||||||||| || |||||
Sbjct: 385 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 326
Query: 356 ggggg 360
|||||
Sbjct: 325 ggggg 321
>gb|AU092662.1|AU092662 AU092662 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52787, mRNA sequence
Length = 695
Score = 170 bits (86), Expect = 6e-040
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 413 tactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggta 472
||||| |||||||| ||||| || || ||||||||||| ||||| || ||||| || ||
Sbjct: 322 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 263
Query: 473 gcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaac 532
|| |||||| |||| ||||| |||| ||||||||||||||| || |||||||| || ||
Sbjct: 262 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 203
Query: 533 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgc 592
|| | ||||||||| ||||| |||||||||| |||||||||||| ||||||| |||||||
Sbjct: 202 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 143
Query: 593 ttggccacctcctcaagggtgtacaccttc 622
||||| |||||||| ||||| |||||||||
Sbjct: 142 ttggcgacctcctccagggtatacaccttc 113
Score = 145 bits (73), Expect = 4e-032
Identities = 112/125 (89%)
Strand = Plus / Minus
Query: 236 tccgacttggtgtagatccttacagcaacagccaggcccagtattgccagggggaccaaa 295
|||||||||||||||||||| | |||||||||||||||| ||| || ||||| |||||
Sbjct: 499 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 440
Query: 296 aactggaggatcttgatgacgaactccggggtcttatcctggttgtagtgcggctgcttg 355
||||||||||||||||||| ||||||||||||||| |||||||||||||| || |||||
Sbjct: 439 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 380
Query: 356 ggggg 360
|||||
Sbjct: 379 ggggg 375
>gb|AU095902.1|AU095902 AU095902 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11485, mRNA sequence
Length = 611
Score = 170 bits (86), Expect = 6e-040
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 413 tactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggta 472
||||| |||||||| ||||| || || ||||||||||| ||||| || ||||| || ||
Sbjct: 224 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 165
Query: 473 gcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaac 532
|| |||||| |||| ||||| |||| ||||||||||||||| || |||||||| || ||
Sbjct: 164 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 105
Query: 533 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgc 592
|| | ||||||||| ||||| |||||||||| |||||||||||| ||||||| |||||||
Sbjct: 104 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 45
Query: 593 ttggccacctcctcaagggtgtacaccttc 622
||||| |||||||| ||||| |||||||||
Sbjct: 44 ttggcgacctcctccagggtatacaccttc 15
Score = 135 bits (68), Expect = 3e-029
Identities = 106/119 (89%)
Strand = Plus / Minus
Query: 236 tccgacttggtgtagatccttacagcaacagccaggcccagtattgccagggggaccaaa 295
|||||||||||||||||||| | |||||||||||||||| ||| | ||||| |||||
Sbjct: 402 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggngaggggaaccaag 343
Query: 296 aactggaggatcttgatgacgaactccggggtcttatcctggttgtagtgcggctgctt 354
||||||||||||||||||| ||||||||||||||| |||||||||||||| || |||||
Sbjct: 342 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgctt 284
>gb|CA999252.1|CA999252 S234P_C07 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 548
Score = 170 bits (86), Expect = 6e-040
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 413 tactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggta 472
||||| |||||||| ||||| || || ||||||||||| ||||| || ||||| || ||
Sbjct: 427 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 368
Query: 473 gcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaac 532
|| |||||| |||| ||||| |||| ||||||||||||||| || |||||||| || ||
Sbjct: 367 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 308
Query: 533 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgc 592
|| | ||||||||| ||||| |||||||||| |||||||||||| ||||||| |||||||
Sbjct: 307 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 248
Query: 593 ttggccacctcctcaagggtgtacaccttc 622
||||| |||||||| ||||| |||||||||
Sbjct: 247 ttggcgacctcctccagggtatacaccttc 218
Score = 97.6 bits (49), Expect = 8e-018
Identities = 61/65 (93%)
Strand = Plus / Minus
Query: 296 aactggaggatcttgatgacgaactccggggtcttatcctggttgtagtgcggctgcttg 355
||||||||||||||||||| ||||||||||||||| |||||||||||||| || ||||||
Sbjct: 544 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttg 485
Query: 356 ggggg 360
|||||
Sbjct: 484 ggggg 480
>gb|CF282412.1|CF282412 14ETL--09-O18.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--09-O18, mRNA sequence
Length = 681
Score = 170 bits (86), Expect = 6e-040
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 413 tactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggta 472
||||| |||||||| ||||| || || ||||||||||| ||||| || ||||| || ||
Sbjct: 375 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 316
Query: 473 gcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaac 532
|| |||||| |||| ||||| |||| ||||||||||||||| || |||||||| || ||
Sbjct: 315 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 256
Query: 533 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgc 592
|| | ||||||||| ||||| |||||||||| |||||||||||| ||||||| |||||||
Sbjct: 255 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 196
Query: 593 ttggccacctcctcaagggtgtacaccttc 622
||||| |||||||| ||||| |||||||||
Sbjct: 195 ttggcgacctcctccagggtatacaccttc 166
Score = 139 bits (70), Expect = 2e-030
Identities = 100/110 (90%)
Strand = Plus / Minus
Query: 236 tccgacttggtgtagatccttacagcaacagccaggcccagtattgccagggggaccaaa 295
|||||||||||||||||||| | |||||||||||||||| ||| || ||||| |||||
Sbjct: 552 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 493
Query: 296 aactggaggatcttgatgacgaactccggggtcttatcctggttgtagtg 345
||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 492 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtg 443
>gb|CF295047.1|CF295047 30DGS--04-M23.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--04-M23, mRNA sequence
Length = 688
Score = 170 bits (86), Expect = 6e-040
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 413 tactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggta 472
||||| |||||||| ||||| || || ||||||||||| ||||| || ||||| || ||
Sbjct: 407 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 348
Query: 473 gcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaac 532
|| |||||| |||| ||||| |||| ||||||||||||||| || |||||||| || ||
Sbjct: 347 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 288
Query: 533 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgc 592
|| | ||||||||| ||||| |||||||||| |||||||||||| ||||||| |||||||
Sbjct: 287 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 228
Query: 593 ttggccacctcctcaagggtgtacaccttc 622
||||| |||||||| ||||| |||||||||
Sbjct: 227 ttggcgacctcctccagggtatacaccttc 198
Score = 145 bits (73), Expect = 4e-032
Identities = 112/125 (89%)
Strand = Plus / Minus
Query: 236 tccgacttggtgtagatccttacagcaacagccaggcccagtattgccagggggaccaaa 295
|||||||||||||||||||| | |||||||||||||||| ||| || ||||| |||||
Sbjct: 584 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 525
Query: 296 aactggaggatcttgatgacgaactccggggtcttatcctggttgtagtgcggctgcttg 355
||||||||||||||||||| ||||||||||||||| |||||||||||||| || |||||
Sbjct: 524 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 465
Query: 356 ggggg 360
|||||
Sbjct: 464 ggggg 460
>gb|CF305853.1|CF305853 HDA1--01-O21.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--01-O21, mRNA sequence
Length = 486
Score = 170 bits (86), Expect = 6e-040
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 413 tactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggta 472
||||| |||||||| ||||| || || ||||||||||| ||||| || ||||| || ||
Sbjct: 345 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 286
Query: 473 gcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaac 532
|| |||||| |||| ||||| |||| ||||||||||||||| || |||||||| || ||
Sbjct: 285 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 226
Query: 533 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgc 592
|| | ||||||||| ||||| |||||||||| |||||||||||| ||||||| |||||||
Sbjct: 225 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 166
Query: 593 ttggccacctcctcaagggtgtacaccttc 622
||||| |||||||| ||||| |||||||||
Sbjct: 165 ttggcgacctcctccagggtatacaccttc 136
Score = 97.6 bits (49), Expect = 8e-018
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 284 agggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtag 343
||||| ||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 474 aggggaaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtag 415
Query: 344 tgcggctgcttgggggg 360
|| || ||||| |||||
Sbjct: 414 tgtggttgctttggggg 398
>gb|CF311153.1|CF311153 ABF--06-E08.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--06-E08, mRNA sequence
Length = 605
Score = 170 bits (86), Expect = 6e-040
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 413 tactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggta 472
||||| |||||||| ||||| || || ||||||||||| ||||| || ||||| || ||
Sbjct: 490 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 431
Query: 473 gcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaac 532
|| |||||| |||| ||||| |||| ||||||||||||||| || |||||||| || ||
Sbjct: 430 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 371
Query: 533 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgc 592
|| | ||||||||| ||||| |||||||||| |||||||||||| ||||||| |||||||
Sbjct: 370 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 311
Query: 593 ttggccacctcctcaagggtgtacaccttc 622
||||| |||||||| ||||| |||||||||
Sbjct: 310 ttggcgacctcctccagggtatacaccttc 281
Score = 69.9 bits (35), Expect = 2e-009
Identities = 57/63 (90%), Gaps = 1/63 (1%)
Strand = Plus / Minus
Query: 299 tggaggatcttgatgacgaactcc-ggggtcttatcctggttgtagtgcggctgcttggg 357
|||||||||||||||| ||||||| |||||||| |||||||||||||| || ||||| ||
Sbjct: 605 tggaggatcttgatgatgaactccgggggtcttgtcctggttgtagtgtggttgctttgg 546
Query: 358 ggg 360
|||
Sbjct: 545 ggg 543
>gb|CF318817.1|CF318817 HD--09-B14.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--09-B14, mRNA sequence
Length = 632
Score = 170 bits (86), Expect = 6e-040
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 413 tactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggta 472
||||| |||||||| ||||| || || ||||||||||| ||||| || ||||| || ||
Sbjct: 494 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 435
Query: 473 gcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaac 532
|| |||||| |||| ||||| |||| ||||||||||||||| || |||||||| || ||
Sbjct: 434 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 375
Query: 533 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgc 592
|| | ||||||||| ||||| |||||||||| |||||||||||| ||||||| |||||||
Sbjct: 374 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 315
Query: 593 ttggccacctcctcaagggtgtacaccttc 622
||||| |||||||| ||||| |||||||||
Sbjct: 314 ttggcgacctcctccagggtatacaccttc 285
Score = 97.6 bits (49), Expect = 8e-018
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 284 agggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtag 343
||||| ||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 623 aggggaaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtag 564
Query: 344 tgcggctgcttgggggg 360
|| || ||||| |||||
Sbjct: 563 tgtggttgctttggggg 547
>gb|CF318978.1|CF318978 HD--09-F03.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--09-F03, mRNA sequence
Length = 533
Score = 170 bits (86), Expect = 6e-040
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 413 tactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggta 472
||||| |||||||| ||||| || || ||||||||||| ||||| || ||||| || ||
Sbjct: 496 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 437
Query: 473 gcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaac 532
|| |||||| |||| ||||| |||| ||||||||||||||| || |||||||| || ||
Sbjct: 436 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 377
Query: 533 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgc 592
|| | ||||||||| ||||| |||||||||| |||||||||||| ||||||| |||||||
Sbjct: 376 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 317
Query: 593 ttggccacctcctcaagggtgtacaccttc 622
||||| |||||||| ||||| |||||||||
Sbjct: 316 ttggcgacctcctccagggtatacaccttc 287
>gb|CF321374.1|CF321374 HD--12-J19.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--12-J19, mRNA sequence
Length = 592
Score = 170 bits (86), Expect = 6e-040
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 413 tactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggta 472
||||| |||||||| ||||| || || ||||||||||| ||||| || ||||| || ||
Sbjct: 456 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 397
Query: 473 gcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaac 532
|| |||||| |||| ||||| |||| ||||||||||||||| || |||||||| || ||
Sbjct: 396 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 337
Query: 533 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgc 592
|| | ||||||||| ||||| |||||||||| |||||||||||| ||||||| |||||||
Sbjct: 336 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 277
Query: 593 ttggccacctcctcaagggtgtacaccttc 622
||||| |||||||| ||||| |||||||||
Sbjct: 276 ttggcgacctcctccagggtatacaccttc 247
Score = 97.6 bits (49), Expect = 8e-018
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 284 agggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtag 343
||||| ||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 585 aggggaaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtag 526
Query: 344 tgcggctgcttgggggg 360
|| || ||||| |||||
Sbjct: 525 tgtggttgctttggggg 509
>gb|CF323964.1|CF323964 HDN--05-D24.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--05-D24, mRNA sequence
Length = 563
Score = 170 bits (86), Expect = 6e-040
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 413 tactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggta 472
||||| |||||||| ||||| || || ||||||||||| ||||| || ||||| || ||
Sbjct: 355 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 296
Query: 473 gcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaac 532
|| |||||| |||| ||||| |||| ||||||||||||||| || |||||||| || ||
Sbjct: 295 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 236
Query: 533 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgc 592
|| | ||||||||| ||||| |||||||||| |||||||||||| ||||||| |||||||
Sbjct: 235 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 176
Query: 593 ttggccacctcctcaagggtgtacaccttc 622
||||| |||||||| ||||| |||||||||
Sbjct: 175 ttggcgacctcctccagggtatacaccttc 146
Score = 145 bits (73), Expect = 4e-032
Identities = 112/125 (89%)
Strand = Plus / Minus
Query: 236 tccgacttggtgtagatccttacagcaacagccaggcccagtattgccagggggaccaaa 295
|||||||||||||||||||| | |||||||||||||||| ||| || ||||| |||||
Sbjct: 532 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 473
Query: 296 aactggaggatcttgatgacgaactccggggtcttatcctggttgtagtgcggctgcttg 355
||||||||||||||||||| ||||||||||||||| |||||||||||||| || |||||
Sbjct: 472 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 413
Query: 356 ggggg 360
|||||
Sbjct: 412 ggggg 408
>gb|CF324621.1|CF324621 JMT1--01-A12.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--01-A12, mRNA sequence
Length = 495
Score = 170 bits (86), Expect = 6e-040
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 413 tactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggta 472
||||| |||||||| ||||| || || ||||||||||| ||||| || ||||| || ||
Sbjct: 357 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 298
Query: 473 gcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaac 532
|| |||||| |||| ||||| |||| ||||||||||||||| || |||||||| || ||
Sbjct: 297 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 238
Query: 533 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgc 592
|| | ||||||||| ||||| |||||||||| |||||||||||| ||||||| |||||||
Sbjct: 237 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 178
Query: 593 ttggccacctcctcaagggtgtacaccttc 622
||||| |||||||| ||||| |||||||||
Sbjct: 177 ttggcgacctcctccagggtatacaccttc 148
Score = 97.6 bits (49), Expect = 8e-018
Identities = 70/77 (90%)
Strand = Plus / Minus
Query: 284 agggggaccaaaaactggaggatcttgatgacgaactccggggtcttatcctggttgtag 343
||||| ||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 486 aggggaaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttgtag 427
Query: 344 tgcggctgcttgggggg 360
|| || ||||| |||||
Sbjct: 426 tgtggttgctttggggg 410
>gb|CF324999.1|CF324999 JMT1--02-A18.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--02-A18, mRNA sequence
Length = 495
Score = 170 bits (86), Expect = 6e-040
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 413 tactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggta 472
||||| |||||||| ||||| || || ||||||||||| ||||| || ||||| || ||
Sbjct: 356 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 297
Query: 473 gcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaac 532
|| |||||| |||| ||||| |||| ||||||||||||||| || |||||||| || ||
Sbjct: 296 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 237
Query: 533 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgc 592
|| | ||||||||| ||||| |||||||||| |||||||||||| ||||||| |||||||
Sbjct: 236 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 177
Query: 593 ttggccacctcctcaagggtgtacaccttc 622
||||| |||||||| ||||| |||||||||
Sbjct: 176 ttggcgacctcctccagggtatacaccttc 147
Score = 83.8 bits (42), Expect = 1e-013
Identities = 70/78 (89%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 284 agggggaccaaaaactggaggatcttgatgacgaactccgggg-tcttatcctggttgta 342
||||| ||||| ||||||||||||||||||| ||||||||||| |||| |||||||||||
Sbjct: 486 aggggaaccaagaactggaggatcttgatgatgaactccggggttcttgtcctggttgta 427
Query: 343 gtgcggctgcttgggggg 360
||| || ||||| |||||
Sbjct: 426 gtgtggttgctttggggg 409
>gb|CF325902.1|CF325902 JMT1--04-I16.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--04-I16, mRNA sequence
Length = 640
Score = 170 bits (86), Expect = 6e-040
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 413 tactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggta 472
||||| |||||||| ||||| || || ||||||||||| ||||| || ||||| || ||
Sbjct: 357 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 298
Query: 473 gcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaac 532
|| |||||| |||| ||||| |||| ||||||||||||||| || |||||||| || ||
Sbjct: 297 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 238
Query: 533 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgc 592
|| | ||||||||| ||||| |||||||||| |||||||||||| ||||||| |||||||
Sbjct: 237 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 178
Query: 593 ttggccacctcctcaagggtgtacaccttc 622
||||| |||||||| ||||| |||||||||
Sbjct: 177 ttggcgacctcctccagggtatacaccttc 148
Score = 145 bits (73), Expect = 4e-032
Identities = 112/125 (89%)
Strand = Plus / Minus
Query: 236 tccgacttggtgtagatccttacagcaacagccaggcccagtattgccagggggaccaaa 295
|||||||||||||||||||| | |||||||||||||||| ||| || ||||| |||||
Sbjct: 534 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 475
Query: 296 aactggaggatcttgatgacgaactccggggtcttatcctggttgtagtgcggctgcttg 355
||||||||||||||||||| ||||||||||||||| |||||||||||||| || |||||
Sbjct: 474 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 415
Query: 356 ggggg 360
|||||
Sbjct: 414 ggggg 410
>gb|CF327804.1|CF327804 NACL--02-H02.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--02-H02, mRNA sequence
Length = 557
Score = 170 bits (86), Expect = 6e-040
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 413 tactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggta 472
||||| |||||||| ||||| || || ||||||||||| ||||| || ||||| || ||
Sbjct: 530 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 471
Query: 473 gcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaac 532
|| |||||| |||| ||||| |||| ||||||||||||||| || |||||||| || ||
Sbjct: 470 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 411
Query: 533 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgc 592
|| | ||||||||| ||||| |||||||||| |||||||||||| ||||||| |||||||
Sbjct: 410 tttgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 351
Query: 593 ttggccacctcctcaagggtgtacaccttc 622
||||| |||||||| ||||| |||||||||
Sbjct: 350 ttggcgacctcctccagggtatacaccttc 321
>gb|CF331817.1|CF331817 NACL--08-B10.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--08-B10, mRNA sequence
Length = 551
Score = 170 bits (86), Expect = 6e-040
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 413 tactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggta 472
||||| |||||||| ||||| || || ||||||||||| ||||| || ||||| || ||
Sbjct: 492 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 433
Query: 473 gcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaac 532
|| |||||| |||| ||||| |||| ||||||||||||||| || |||||||| || ||
Sbjct: 432 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 373
Query: 533 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgc 592
|| | ||||||||| ||||| |||||||||| |||||||||||| ||||||| |||||||
Sbjct: 372 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 313
Query: 593 ttggccacctcctcaagggtgtacaccttc 622
||||| |||||||| ||||| |||||||||
Sbjct: 312 ttggcgacctcctccagggtatacaccttc 283
>gb|CV722495.1|CV722495 YTPSP--01-I02.b1 TPSP-overexpression transgenic rice yeast two
hybrid lambda phage cDNA library (YTPSP) Oryza sativa
(japonica cultivar-group) cDNA clone YTPSP--01-I02, mRNA
sequence
Length = 515
Score = 170 bits (86), Expect = 6e-040
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 413 tactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggta 472
||||| |||||||| ||||| || || ||||||||||| ||||| || ||||| || ||
Sbjct: 363 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 304
Query: 473 gcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaac 532
|| |||||| |||| ||||| |||| ||||||||||||||| || |||||||| || ||
Sbjct: 303 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 244
Query: 533 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgc 592
|| | ||||||||| ||||| |||||||||| |||||||||||| ||||||| |||||||
Sbjct: 243 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 184
Query: 593 ttggccacctcctcaagggtgtacaccttc 622
||||| |||||||| ||||| |||||||||
Sbjct: 183 ttggcgacctcctccagggtatacaccttc 154
Score = 119 bits (60), Expect = 2e-024
Identities = 90/100 (90%)
Strand = Plus / Minus
Query: 261 caacagccaggcccagtattgccagggggaccaaaaactggaggatcttgatgacgaact 320
||||||||||||||| ||| || ||||| ||||| ||||||||||||||||||| |||||
Sbjct: 515 caacagccaggcccaatatggcgaggggaaccaagaactggaggatcttgatgatgaact 456
Query: 321 ccggggtcttatcctggttgtagtgcggctgcttgggggg 360
|||||||||| |||||||||||||| || ||||| |||||
Sbjct: 455 ccggggtcttgtcctggttgtagtgtggttgctttggggg 416
>gb|CV725728.1|CV725728 14Salt--02-P08.g1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--02-P08, mRNA sequence
Length = 489
Score = 170 bits (86), Expect = 6e-040
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 413 tactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggta 472
||||| |||||||| ||||| || || ||||||||||| ||||| || ||||| || ||
Sbjct: 376 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 317
Query: 473 gcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaac 532
|| |||||| |||| ||||| |||| ||||||||||||||| || |||||||| || ||
Sbjct: 316 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 257
Query: 533 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgc 592
|| | ||||||||| ||||| |||||||||| |||||||||||| ||||||| |||||||
Sbjct: 256 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 197
Query: 593 ttggccacctcctcaagggtgtacaccttc 622
||||| |||||||| ||||| |||||||||
Sbjct: 196 ttggcgacctcctccagggtatacaccttc 167
Score = 81.8 bits (41), Expect = 4e-013
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 300 ggaggatcttgatgacgaactccggggtcttatcctggttgtagtgcggctgcttggggg 359
||||||||||||||| ||||||||||||||| |||||||||||||| || ||||| ||||
Sbjct: 489 ggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgctttgggg 430
Query: 360 g 360
|
Sbjct: 429 g 429
>gb|CV729036.1|CV729036 FLO--01-K18.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--01-K18,
mRNA sequence
Length = 497
Score = 170 bits (86), Expect = 6e-040
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 413 tactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggta 472
||||| |||||||| ||||| || || ||||||||||| ||||| || ||||| || ||
Sbjct: 486 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 427
Query: 473 gcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaac 532
|| |||||| |||| ||||| |||| ||||||||||||||| || |||||||| || ||
Sbjct: 426 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 367
Query: 533 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgc 592
|| | ||||||||| ||||| |||||||||| |||||||||||| ||||||| |||||||
Sbjct: 366 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 307
Query: 593 ttggccacctcctcaagggtgtacaccttc 622
||||| |||||||| ||||| |||||||||
Sbjct: 306 ttggcgacctcctccagggtatacaccttc 277
>dbj|AK064821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E24, full
insert sequence
Length = 743
Score = 170 bits (86), Expect = 6e-040
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 413 tactcgtccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggta 472
||||| |||||||| ||||| || || ||||||||||| ||||| || ||||| || ||
Sbjct: 373 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 314
Query: 473 gcatccttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaac 532
|| |||||| |||| ||||| |||| ||||||||||||||| || |||||||| || ||
Sbjct: 313 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 254
Query: 533 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgc 592
|| | ||||||||| ||||| |||||||||| |||||||||||| ||||||| |||||||
Sbjct: 253 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 194
Query: 593 ttggccacctcctcaagggtgtacaccttc 622
||||| |||||||| ||||| |||||||||
Sbjct: 193 ttggcgacctcctccagggtatacaccttc 164
Score = 145 bits (73), Expect = 4e-032
Identities = 112/125 (89%)
Strand = Plus / Minus
Query: 236 tccgacttggtgtagatccttacagcaacagccaggcccagtattgccagggggaccaaa 295
|||||||||||||||||||| | |||||||||||||||| ||| || ||||| |||||
Sbjct: 550 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 491
Query: 296 aactggaggatcttgatgacgaactccggggtcttatcctggttgtagtgcggctgcttg 355
||||||||||||||||||| ||||||||||||||| |||||||||||||| || |||||
Sbjct: 490 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 431
Query: 356 ggggg 360
|||||
Sbjct: 430 ggggg 426
>gb|CV730074.1|CV730074 FLO--03-G23.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--03-G23,
mRNA sequence
Length = 488
Score = 167 bits (84), Expect = 1e-038
Identities = 174/204 (85%)
Strand = Plus / Minus
Query: 419 tccatcattgcacgggcggtggtgctgtgccccacatcttcgaaatcatcggtagcatcc 478
|||||||| ||||| || || ||||||||||| ||||| || ||||| || || || |||
Sbjct: 487 tccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtcgcgtcc 428
Query: 479 ttggcagtggaagacagcaggacatcatcacctccagggtggtcctccagaaacttggtc 538
||| |||| ||||| |||| ||||||||||||||| || |||||||| || || || | |
Sbjct: 427 ttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaatttcgac 368
Query: 539 acattgtacaccttgccgccgatgacgagccagcagtcatccttggtgttgtgcttggcc 598
|||||||| ||||| |||||||||| |||||||||||| ||||||| ||||||||||||
Sbjct: 367 acattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgcttggcg 308
Query: 599 acctcctcaagggtgtacaccttc 622
|||||||| ||||| |||||||||
Sbjct: 307 acctcctccagggtatacaccttc 284
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,017,243
Number of Sequences: 438736
Number of extensions: 1017243
Number of successful extensions: 11944
Number of sequences better than 0.5: 154
Number of HSP's better than 0.5 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 11060
Number of HSP's gapped (non-prelim): 839
length of query: 682
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 661
effective length of database: 2,791,206,460
effective search space: 1844987470060
effective search space used: 1844987470060
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)