BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.628
(1238 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB649259.1|CB649259 OSJNEb13B13.f OSJNEb Oryza sativa (j... 289 2e-075
gb|CB654928.1|CB654928 OSJNEc07N11.f OSJNEc Oryza sativa (j... 289 2e-075
gb|CB656494.1|CB656494 OSJNEc10O11.f OSJNEc Oryza sativa (j... 289 2e-075
gb|CB656767.1|CB656767 OSJNEc11H19.f OSJNEc Oryza sativa (j... 289 2e-075
gb|CB659444.1|CB659444 OSJNEc16H04.f OSJNEc Oryza sativa (j... 289 2e-075
gb|CB669351.1|CB669351 OSJNEe01M11.f OSJNEe Oryza sativa (j... 289 2e-075
gb|CB671517.1|CB671517 OSJNEe05C07.f OSJNEe Oryza sativa (j... 289 2e-075
dbj|AK065341.1| Oryza sativa (japonica cultivar-group) cDNA... 289 2e-075
dbj|AK099348.1| Oryza sativa (japonica cultivar-group) cDNA... 289 2e-075
dbj|AK104328.1| Oryza sativa (japonica cultivar-group) cDNA... 289 2e-075
dbj|AK104826.1| Oryza sativa (japonica cultivar-group) cDNA... 289 2e-075
ref|XM_477251.1| Oryza sativa (japonica cultivar-group), mRNA 289 2e-075
ref|XM_477252.1| Oryza sativa (japonica cultivar-group), mRNA 289 2e-075
ref|XM_506239.2| PREDICTED Oryza sativa (japonica cultivar-... 289 2e-075
ref|XM_507358.1| PREDICTED Oryza sativa (japonica cultivar-... 289 2e-075
gb|CB671653.1|CB671653 OSJNEe05F07.f OSJNEe Oryza sativa (j... 281 4e-073
gb|CF322562.1|CF322562 HDN--01-G20.g1 OsHDAC1-overexpressin... 276 3e-071
gb|CF323995.1|CF323995 HDN--05-F10.g1 OsHDAC1-overexpressin... 276 3e-071
gb|CV722575.1|CV722575 YTPSP--01-O06.b1 TPSP-overexpression... 276 3e-071
gb|C28257.1|C28257 C28257 Rice callus cDNA Oryza sativa (ja... 252 4e-064
ref|XM_470032.1| Oryza sativa (japonica cultivar-group), mRNA 240 2e-060
gb|AU184528.1|AU184528 AU184528 Rice root Oryza sativa (jap... 236 2e-059
dbj|AK065345.1| Oryza sativa (japonica cultivar-group) cDNA... 232 4e-058
gb|AU312235.1|AU312235 AU312235 Oryza sativa pistil cDNA Or... 230 1e-057
gb|CF324022.1|CF324022 HDN--05-G16.g1 OsHDAC1-overexpressin... 218 6e-054
dbj|AK070712.1| Oryza sativa (japonica cultivar-group) cDNA... 218 6e-054
ref|XM_470161.1| Oryza sativa (japonica cultivar-group), mRNA 218 6e-054
gb|D24386.1|D24386 RICR1821A Rice root Oryza sativa (japoni... 202 3e-049
gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 ... 198 5e-048
gb|AACV01008131.1| Oryza sativa (japonica cultivar-group) c... 198 5e-048
ref|NT_107188.1| Oryza sativa (japonica cultivar-group) 198 5e-048
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 198 5e-048
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 198 5e-048
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 198 5e-048
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 198 5e-048
dbj|AP003812.1| Oryza sativa (japonica cultivar-group) chro... 192 3e-046
dbj|AP003738.3| Oryza sativa (japonica cultivar-group) geno... 192 3e-046
dbj|AP006266.3| Oryza sativa (japonica cultivar-group) geno... 192 3e-046
gb|AACV01015560.1| Oryza sativa (japonica cultivar-group) c... 192 3e-046
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 192 3e-046
gb|CH401221.1| Oryza sativa (japonica cultivar-group) chrom... 192 3e-046
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 192 3e-046
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 192 3e-046
gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 ... 182 3e-043
gb|AACV01008212.1| Oryza sativa (japonica cultivar-group) c... 182 3e-043
gb|C72767.1|C72767 C72767 Rice panicle at flowering stage O... 180 1e-042
gb|AU161312.1|AU161312 AU161312 Rice callus Oryza sativa (j... 178 5e-042
gb|C28712.1|C28712 C28712 Rice callus cDNA Oryza sativa (ja... 167 2e-038
gb|AU078600.1|AU078600 AU078600 Rice callus Oryza sativa (j... 161 1e-036
dbj|AK073504.1| Oryza sativa (japonica cultivar-group) cDNA... 151 1e-033
ref|XM_479556.1| Oryza sativa (japonica cultivar-group), mRNA 151 1e-033
gb|C93553.1|C93553 C93553 Rice callus Oryza sativa (japonic... 149 4e-033
gb|D24456.2|D24456 RICR1950A Rice root Oryza sativa (japoni... 133 3e-028
gb|AQ869400.1|AQ869400 nbeb0035A20r CUGI Rice BAC Library (... 115 6e-023
dbj|AP005099.2| Oryza sativa (japonica cultivar-group) geno... 109 4e-021
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 109 4e-021
gb|AU064480.1|AU064480 AU064480 Rice panicle shorter than 3... 101 9e-019
gb|AACV01017032.1| Oryza sativa (japonica cultivar-group) c... 101 9e-019
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 101 9e-019
gb|AQ575124.1|AQ575124 nbxb0086D08f CUGI Rice BAC Library O... 90 3e-015
gb|C28727.1|C28727 C28727 Rice callus cDNA Oryza sativa (ja... 90 3e-015
gb|AU064483.1|AU064483 AU064483 Rice panicle shorter than 3... 88 1e-014
gb|CB660103.1|CB660103 OSJNEd01J08.f OSJNEd Oryza sativa (j... 60 3e-006
gb|C91804.1|C91804 C91804 Rice panicle shorter than 3cm Ory... 58 1e-005
gb|CA754885.1|CA754885 BR030007002_BR030_H09_72_079.ab1 OA ... 54 2e-004
gb|CA999388.1|CA999388 S234H_B03 Rice cold stress germinati... 54 2e-004
gb|CB640683.1|CB640683 OSJNEa15O14.f OSJNEa Oryza sativa (j... 54 2e-004
gb|CB645143.1|CB645143 OSJNEb06K17.f OSJNEb Oryza sativa (j... 54 2e-004
gb|CB650400.1|CB650400 OSJNEb14N05.f OSJNEb Oryza sativa (j... 54 2e-004
gb|CB651467.1|CB651467 OSJNEb16G24.f OSJNEb Oryza sativa (j... 54 2e-004
gb|CB655818.1|CB655818 OSJNEc09J08.f OSJNEc Oryza sativa (j... 54 2e-004
dbj|AK099626.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
ref|NM_190260.1| Oryza sativa (japonica cultivar-group), p... 54 2e-004
gb|C28962.1|C28962 C28962 Rice callus cDNA Oryza sativa (ja... 52 7e-004
gb|AU068604.1|AU068604 AU068604 Rice callus Oryza sativa (j... 52 7e-004
gb|AQ157532.1|AQ157532 nbxb0009L15r CUGI Rice BAC Library O... 48 0.012
>gb|CB649259.1|CB649259 OSJNEb13B13.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb13B13 5', mRNA sequence
Length = 751
Score = 289 bits (146), Expect = 2e-075
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 488 tgtacccacagatgtctggtccaaacataatgctgtacggtgtgtccccaccaaatttct 429
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| ||||||||||| ||||| ||||| || ||||| || ||||||||||| ||||
Sbjct: 428 tctggtcaacatcaccaccaagcaacttgacatatccaccaccacagtcaagcttttgct 369
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| |
Sbjct: 368 catgctttacagagaactgcagcaccagggttttatccttgttgctgaattctgggtact 309
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| || ||||||||||| ||||| |||| || |||||||||||||| | ||
Sbjct: 308 ccgctgaaatagcgtagaacctgtagtcctcagaggtttggatacctttgtcctcaggat 249
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||||||| || || || || ||||||||||||||||||||||||||
Sbjct: 248 ctccattccacttcccagatgtgtggttccattcaccagccatgttctcatccttc 193
>gb|CB654928.1|CB654928 OSJNEc07N11.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc07N11 5', mRNA sequence
Length = 816
Score = 289 bits (146), Expect = 2e-075
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 476 tgtacccacagatgtctggtccaaacataatgctgtacggtgtgtccccaccaaatttct 417
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| ||||||||||| ||||| ||||| || ||||| || ||||||||||| ||||
Sbjct: 416 tctggtcaacatcaccaccaagcaacttgacatatccaccaccacagtcaagcttttgct 357
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| |
Sbjct: 356 catgctttacagagaactgcagcaccagggttttatccttgttgctgaattctgggtact 297
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| || ||||||||||| ||||| |||| || |||||||||||||| | ||
Sbjct: 296 ccgctgaaatagcgtagaacctgtagtcctcagaggtttggatacctttgtcctcaggat 237
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||||||| || || || || ||||||||||||||||||||||||||
Sbjct: 236 ctccattccacttcccagatgtgtggttccattcaccagccatgttctcatccttc 181
>gb|CB656494.1|CB656494 OSJNEc10O11.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc10O11 5', mRNA sequence
Length = 811
Score = 289 bits (146), Expect = 2e-075
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 488 tgtacccacagatgtctggtccaaacataatgctgtacggtgtgtccccaccaaatttct 429
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| ||||||||||| ||||| ||||| || ||||| || ||||||||||| ||||
Sbjct: 428 tctggtcaacatcaccaccaagcaacttgacatatccaccaccacagtcaagcttttgct 369
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| |
Sbjct: 368 catgctttacagagaactgcagcaccagggttttatccttgttgctgaattctgggtact 309
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| || ||||||||||| ||||| |||| || |||||||||||||| | ||
Sbjct: 308 ccgctgaaatagcgtagaacctgtagtcctcagaggtttggatacctttgtcctcaggat 249
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||||||| || || || || ||||||||||||||||||||||||||
Sbjct: 248 ctccattccacttcccagatgtgtggttccattcaccagccatgttctcatccttc 193
>gb|CB656767.1|CB656767 OSJNEc11H19.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11H19 5', mRNA sequence
Length = 889
Score = 289 bits (146), Expect = 2e-075
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 493 tgtacccacagatgtctggtccaaacataatgctgtacggtgtgtccccaccaaatttct 434
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| ||||||||||| ||||| ||||| || ||||| || ||||||||||| ||||
Sbjct: 433 tctggtcaacatcaccaccaagcaacttgacatatccaccaccacagtcaagcttttgct 374
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| |
Sbjct: 373 catgctttacagagaactgcagcaccagggttttatccttgttgctgaattctgggtact 314
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| || ||||||||||| ||||| |||| || |||||||||||||| | ||
Sbjct: 313 ccgctgaaatagcgtagaacctgtagtcctcagaggtttggatacctttgtcctcaggat 254
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||||||| || || || || ||||||||||||||||||||||||||
Sbjct: 253 ctccattccacttcccagatgtgtggttccattcaccagccatgttctcatccttc 198
>gb|CB659444.1|CB659444 OSJNEc16H04.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc16H04 5', mRNA sequence
Length = 821
Score = 289 bits (146), Expect = 2e-075
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 462 tgtacccacagatgtctggtccaaacataatgctgtacggtgtgtccccaccaaatttct 403
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| ||||||||||| ||||| ||||| || ||||| || ||||||||||| ||||
Sbjct: 402 tctggtcaacatcaccaccaagcaacttgacatatccaccaccacagtcaagcttttgct 343
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| |
Sbjct: 342 catgctttacagagaactgcagcaccagggttttatccttgttgctgaattctgggtact 283
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| || ||||||||||| ||||| |||| || |||||||||||||| | ||
Sbjct: 282 ccgctgaaatagcgtagaacctgtagtcctcagaggtttggatacctttgtcctcaggat 223
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||||||| || || || || ||||||||||||||||||||||||||
Sbjct: 222 ctccattccacttcccagatgtgtggttccattcaccagccatgttctcatccttc 167
>gb|CB669351.1|CB669351 OSJNEe01M11.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe01M11 5', mRNA sequence
Length = 779
Score = 289 bits (146), Expect = 2e-075
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 480 tgtacccacagatgtctggtccaaacataatgctgtacggtgtgtccccaccaaatttct 421
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| ||||||||||| ||||| ||||| || ||||| || ||||||||||| ||||
Sbjct: 420 tctggtcaacatcaccaccaagcaacttgacatatccaccaccacagtcaagcttttgct 361
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| |
Sbjct: 360 catgctttacagagaactgcagcaccagggttttatccttgttgctgaattctgggtact 301
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| || ||||||||||| ||||| |||| || |||||||||||||| | ||
Sbjct: 300 ccgctgaaatagcgtagaacctgtagtcctcagaggtttggatacctttgtcctcaggat 241
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||||||| || || || || ||||||||||||||||||||||||||
Sbjct: 240 ctccattccacttcccagatgtgtggttccattcaccagccatgttctcatccttc 185
>gb|CB671517.1|CB671517 OSJNEe05C07.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05C07 5', mRNA sequence
Length = 887
Score = 289 bits (146), Expect = 2e-075
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 376 tgtacccacagatgtctggtccaaacataatgctgtacggtgtgtccccaccaaatttct 317
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| ||||||||||| ||||| ||||| || ||||| || ||||||||||| ||||
Sbjct: 316 tctggtcaacatcaccaccaagcaacttgacatatccaccaccacagtcaagcttttgct 257
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| |
Sbjct: 256 catgctttacagagaactgcagcaccagggttttatccttgttgctgaattctgggtact 197
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| || ||||||||||| ||||| |||| || |||||||||||||| | ||
Sbjct: 196 ccgctgaaatagcgtagaacctgtagtcctcagaggtttggatacctttgtcctcaggat 137
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||||||| || || || || ||||||||||||||||||||||||||
Sbjct: 136 ctccattccacttcccagatgtgtggttccattcaccagccatgttctcatccttc 81
>dbj|AK065341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E04, full
insert sequence
Length = 1586
Score = 289 bits (146), Expect = 2e-075
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 525 tgtacccacagatgtctggtccaaacataatgctgtacggtgtgtccccaccaaatttct 466
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| ||||||||||| ||||| ||||| || ||||| || ||||||||||| ||||
Sbjct: 465 tctggtcaacatcaccaccaagcaacttgacatatccaccaccacagtcaagcttttgct 406
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| |
Sbjct: 405 catgctttacagagaactgcagcaccagggttttatccttgttgctgaattctgggtact 346
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| || ||||||||||| ||||| |||| || |||||||||||||| | ||
Sbjct: 345 ccgctgaaatagcgtagaacctgtagtcctcagaggtttggatacctttgtcctcaggat 286
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||||||| || || || || ||||||||||||||||||||||||||
Sbjct: 285 ctccattccacttcccagatgtgtggttccattcaccagccatgttctcatccttc 230
>dbj|AK099348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025I16, full
insert sequence
Length = 1556
Score = 289 bits (146), Expect = 2e-075
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 498 tgtacccacagatgtctggtccaaacataatgctgtacggtgtgtccccaccaaatttct 439
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| ||||||||||| ||||| ||||| || ||||| || ||||||||||| ||||
Sbjct: 438 tctggtcaacatcaccaccaagcaacttgacatatccaccaccacagtcaagcttttgct 379
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| |
Sbjct: 378 catgctttacagagaactgcagcaccagggttttatccttgttgctgaattctgggtact 319
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| || ||||||||||| ||||| |||| || |||||||||||||| | ||
Sbjct: 318 ccgctgaaatagcgtagaacctgtagtcctcagaggtttggatacctttgtcctcaggat 259
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||||||| || || || || ||||||||||||||||||||||||||
Sbjct: 258 ctccattccacttcccagatgtgtggttccattcaccagccatgttctcatccttc 203
>dbj|AK104328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-H03, full
insert sequence
Length = 1675
Score = 289 bits (146), Expect = 2e-075
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 519 tgtacccacagatgtctggtccaaacataatgctgtacggtgtgtccccaccaaatttct 460
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| ||||||||||| ||||| ||||| || ||||| || ||||||||||| ||||
Sbjct: 459 tctggtcaacatcaccaccaagcaacttgacatatccaccaccacagtcaagcttttgct 400
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| |
Sbjct: 399 catgctttacagagaactgcagcaccagggttttatccttgttgctgaattctgggtact 340
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| || ||||||||||| ||||| |||| || |||||||||||||| | ||
Sbjct: 339 ccgctgaaatagcgtagaacctgtagtcctcagaggtttggatacctttgtcctcaggat 280
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||||||| || || || || ||||||||||||||||||||||||||
Sbjct: 279 ctccattccacttcccagatgtgtggttccattcaccagccatgttctcatccttc 224
>dbj|AK104826.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F11, full
insert sequence
Length = 1539
Score = 289 bits (146), Expect = 2e-075
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 497 tgtacccacagatgtctggtccaaacataatgctgtacggtgtgtccccaccaaatttct 438
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| ||||||||||| ||||| ||||| || ||||| || ||||||||||| ||||
Sbjct: 437 tctggtcaacatcaccaccaagcaacttgacatatccaccaccacagtcaagcttttgct 378
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| |
Sbjct: 377 catgctttacagagaactgcagcaccagggttttatccttgttgctgaattctgggtact 318
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| || ||||||||||| ||||| |||| || |||||||||||||| | ||
Sbjct: 317 ccgctgaaatagcgtagaacctgtagtcctcagaggtttggatacctttgtcctcaggat 258
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||||||| || || || || ||||||||||||||||||||||||||
Sbjct: 257 ctccattccacttcccagatgtgtggttccattcaccagccatgttctcatccttc 202
>ref|XM_477251.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1539
Score = 289 bits (146), Expect = 2e-075
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 497 tgtacccacagatgtctggtccaaacataatgctgtacggtgtgtccccaccaaatttct 438
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| ||||||||||| ||||| ||||| || ||||| || ||||||||||| ||||
Sbjct: 437 tctggtcaacatcaccaccaagcaacttgacatatccaccaccacagtcaagcttttgct 378
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| |
Sbjct: 377 catgctttacagagaactgcagcaccagggttttatccttgttgctgaattctgggtact 318
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| || ||||||||||| ||||| |||| || |||||||||||||| | ||
Sbjct: 317 ccgctgaaatagcgtagaacctgtagtcctcagaggtttggatacctttgtcctcaggat 258
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||||||| || || || || ||||||||||||||||||||||||||
Sbjct: 257 ctccattccacttcccagatgtgtggttccattcaccagccatgttctcatccttc 202
>ref|XM_477252.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1646
Score = 289 bits (146), Expect = 2e-075
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 490 tgtacccacagatgtctggtccaaacataatgctgtacggtgtgtccccaccaaatttct 431
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| ||||||||||| ||||| ||||| || ||||| || ||||||||||| ||||
Sbjct: 430 tctggtcaacatcaccaccaagcaacttgacatatccaccaccacagtcaagcttttgct 371
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| |
Sbjct: 370 catgctttacagagaactgcagcaccagggttttatccttgttgctgaattctgggtact 311
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| || ||||||||||| ||||| |||| || |||||||||||||| | ||
Sbjct: 310 ccgctgaaatagcgtagaacctgtagtcctcagaggtttggatacctttgtcctcaggat 251
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||||||| || || || || ||||||||||||||||||||||||||
Sbjct: 250 ctccattccacttcccagatgtgtggttccattcaccagccatgttctcatccttc 195
>ref|XM_506239.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1058_C08.28-2
mRNA
Length = 1585
Score = 289 bits (146), Expect = 2e-075
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 525 tgtacccacagatgtctggtccaaacataatgctgtacggtgtgtccccaccaaatttct 466
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| ||||||||||| ||||| ||||| || ||||| || ||||||||||| ||||
Sbjct: 465 tctggtcaacatcaccaccaagcaacttgacatatccaccaccacagtcaagcttttgct 406
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| |
Sbjct: 405 catgctttacagagaactgcagcaccagggttttatccttgttgctgaattctgggtact 346
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| || ||||||||||| ||||| |||| || |||||||||||||| | ||
Sbjct: 345 ccgctgaaatagcgtagaacctgtagtcctcagaggtttggatacctttgtcctcaggat 286
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||||||| || || || || ||||||||||||||||||||||||||
Sbjct: 285 ctccattccacttcccagatgtgtggttccattcaccagccatgttctcatccttc 230
>ref|XM_507358.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1058_C08.28-2
mRNA
Length = 1557
Score = 289 bits (146), Expect = 2e-075
Identities = 256/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 499 tgtacccacagatgtctggtccaaacataatgctgtacggtgtgtccccaccaaatttct 440
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| ||||||||||| ||||| ||||| || ||||| || ||||||||||| ||||
Sbjct: 439 tctggtcaacatcaccaccaagcaacttgacatatccaccaccacagtcaagcttttgct 380
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| |
Sbjct: 379 catgctttacagagaactgcagcaccagggttttatccttgttgctgaattctgggtact 320
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| || ||||||||||| ||||| |||| || |||||||||||||| | ||
Sbjct: 319 ccgctgaaatagcgtagaacctgtagtcctcagaggtttggatacctttgtcctcaggat 260
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||||||| || || || || ||||||||||||||||||||||||||
Sbjct: 259 ctccattccacttcccagatgtgtggttccattcaccagccatgttctcatccttc 204
>gb|CB671653.1|CB671653 OSJNEe05F07.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe05F07 5', mRNA sequence
Length = 801
Score = 281 bits (142), Expect = 4e-073
Identities = 255/296 (86%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 376 tgtacccacagatgtctggtccaaacataatgctgtacggtgtgtccccaccaaatttct 317
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| ||||||||||| ||||| ||||| || ||||| || ||||||||||| ||||
Sbjct: 316 tctggtcaacatcaccaccaagcaacttgacatatccaccaccacagtcaagcttttgct 257
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| |
Sbjct: 256 catgctttacagagaactgcagcaccagggttttatccttgttgctgaattctgggtact 197
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| || ||||||||||| ||||| |||| || |||||||||||||| | ||
Sbjct: 196 ccgctgaaatagcgtagaacctgtagtcctcagaggtttggatacctttgtcctcaggat 137
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||||||| || || || || |||||||||||||||| |||||||||
Sbjct: 136 ctccattccacttcccagatgtgtggttccattcaccagccatgttgtcatccttc 81
>gb|CF322562.1|CF322562 HDN--01-G20.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--01-G20, mRNA sequence
Length = 579
Score = 276 bits (139), Expect = 3e-071
Identities = 256/297 (86%), Gaps = 1/297 (0%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 483 tgtacccacagatgtctggtccaaacataatgctgtacggtgtgtccccaccaaatttct 424
Query: 901 tctggtctacatcacc-acccagcaatttgacgtagccaccgccgcagtcaagcttctgc 959
||||||| |||||||| ||| ||||| ||||| || ||||| || ||||||||||| |||
Sbjct: 423 tctggtcaacatcacccaccaagcaacttgacatatccaccaccacagtcaagcttttgc 364
Query: 960 tcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtat 1019
|| ||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 363 tcatgctttacagagaactgcagcaccagggttttatccttgttgctgaattctgggtac 304
Query: 1020 tcggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggca 1079
|| |||||||| || ||||||||||| ||||| |||| || |||||||||||||| | |
Sbjct: 303 tccgctgaaatagcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagga 244
Query: 1080 tctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
||||||||||| || || || || ||||||||||||||||||||||||||
Sbjct: 243 tctccattccacttcccagatgtgtggttccattcaccagccatgttctcatccttc 187
>gb|CF323995.1|CF323995 HDN--05-F10.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--05-F10, mRNA sequence
Length = 644
Score = 276 bits (139), Expect = 3e-071
Identities = 256/297 (86%), Gaps = 1/297 (0%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 453 tgtacccacagatgtctggtccaaacataatgctgtacggtgtgtccccaccaaatttct 394
Query: 901 tctggtctacatcacc-acccagcaatttgacgtagccaccgccgcagtcaagcttctgc 959
||||||| |||||||| ||| ||||| ||||| || ||||| || ||||||||||| |||
Sbjct: 393 tctggtcaacatcacccaccaagcaacttgacatatccaccaccacagtcaagcttttgc 334
Query: 960 tcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtat 1019
|| ||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 333 tcatgctttacagagaactgcagcaccagggttttatccttgttgctgaattctgggtac 274
Query: 1020 tcggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggca 1079
|| |||||||| || ||||||||||| ||||| |||| || |||||||||||||| | |
Sbjct: 273 tccgctgaaatagcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagga 214
Query: 1080 tctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
||||||||||| || || || || ||||||||||||||||||||||||||
Sbjct: 213 tctccattccacttcccagatgtgtggttccattcaccagccatgttctcatccttc 157
>gb|CV722575.1|CV722575 YTPSP--01-O06.b1 TPSP-overexpression transgenic rice yeast two hybrid
lambda phage cDNA library (YTPSP) Oryza sativa (japonica
cultivar-group) cDNA clone YTPSP--01-O06, mRNA sequence
Length = 513
Score = 276 bits (139), Expect = 3e-071
Identities = 256/297 (86%), Gaps = 1/297 (0%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 490 tgtacccacagatgtctggtccaaacataatgctgtacggtgtgtccccaccaaatttct 431
Query: 901 tctggtctacatcacc-acccagcaatttgacgtagccaccgccgcagtcaagcttctgc 959
||||||| |||||||| ||| ||||| ||||| || ||||| || ||||||||||| |||
Sbjct: 430 tctggtcaacatcacccaccaagcaacttgacatatccaccaccacagtcaagcttttgc 371
Query: 960 tcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtat 1019
|| ||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 370 tcatgctttacagagaactgcagcaccagggttttatccttgttgctgaattctgggtac 311
Query: 1020 tcggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggca 1079
|| |||||||| || ||||||||||| ||||| |||| || |||||||||||||| | |
Sbjct: 310 tccgctgaaatagcgtagaacctgtagtcctcagaggtttggatacctttgtcctcagga 251
Query: 1080 tctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
||||||||||| || || || || ||||||||||||||||||||||||||
Sbjct: 250 tctccattccacttcccagatgtgtggttccattcaccagccatgttctcatccttc 194
>gb|C28257.1|C28257 C28257 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C60481_1A, mRNA sequence
Length = 460
Score = 252 bits (127), Expect = 4e-064
Identities = 248/293 (84%)
Strand = Plus / Minus
Query: 844 acccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttct 903
||| |||||| ||||| | ||||||||||||||| | |||||| |||| |||||||||||
Sbjct: 451 accnacagatgtctggncnaaacataatgctgtacggtgtgtccccacaaaatttcttct 392
Query: 904 ggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcgt 963
|||| ||||||||||| ||||| ||||| || ||||| || ||||||||||| ||||| |
Sbjct: 391 ggtcaacatcaccaccaagcaacttgacatatccaccaccacagtcaagcttttgctcat 332
Query: 964 gcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcgg 1023
|||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| || |
Sbjct: 331 gctttacagagaactgcagcaccagggttttatccttgttgctgaattctgggtactccg 272
Query: 1024 ctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcatctc 1083
||||||| || ||||||||||| ||||| |||| || ||||||||||||| | |||||
Sbjct: 271 ctgaaatagcgtagaacctgtagtcctcagaggtttggatacctttgtcctnaggatctc 212
Query: 1084 cattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
||||||| || || || || ||||||||||||||||||||||||||
Sbjct: 211 cattccacttcccagatgtgtggttccattcaccagccatgttctcatccttc 159
>ref|XM_470032.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 792
Score = 240 bits (121), Expect = 2e-060
Identities = 187/209 (89%)
Strand = Plus / Minus
Query: 843 tacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttc 902
||||| |||||||||||||||||||| |||||||| | ||| || |||||||| ||||||
Sbjct: 527 tacccgcagatatctggtccaaacatgatgctgtacggtgtctcgccaccaaacttcttc 468
Query: 903 tggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcg 962
||||| ||||| || || |||||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 467 tggtcaacatcgccgccaagcaatttcacgtagccgccgccgcagtcgagcttctgctcg 408
Query: 963 tgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcg 1022
|||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 407 tgcttcaccgagaactgcagcacgagggtcttgtccttgttgctgaactcagggtactcg 348
Query: 1023 gctgaaatggcatagaacctgtaatcctc 1051
|| |||||||| ||||| ||||| |||||
Sbjct: 347 gccgaaatggcgtagaatctgtagtcctc 319
>gb|AU184528.1|AU184528 AU184528 Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R2762, mRNA sequence
Length = 449
Score = 236 bits (119), Expect = 2e-059
Identities = 226/265 (85%)
Strand = Plus / Minus
Query: 872 gctgtaagatgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgac 931
|||||| | |||||| |||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 449 gctgtacggtgtgtccccaccaaatttcttctggtcaacatcaccaccaagcaacttgac 390
Query: 932 gtagccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggt 991
|| ||||| || ||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 389 atatccaccaccacagtcaagcttttgctcatgctttacagagaactgcagcaccagggt 330
Query: 992 cttatccttgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctc 1051
||||||||||||||||| || ||||| || |||||||| || ||||||||||| |||||
Sbjct: 329 tttatccttgttgctgaattctgggtactccgctgaaatagcgtagaacctgtagtcctc 270
Query: 1052 ggaggnntgaatacctttgtcctcggcatctccattccattttcccgaagtnnnnnnnna 1111
|||| || |||||||||||||| | |||||||||||| || || || || |
Sbjct: 269 agaggtttggatacctttgtcctcaggatctccattccacttcccagatgtgtggttcca 210
Query: 1112 ttcaccagccatgttctcatccttc 1136
|||||||||||||||||||||||||
Sbjct: 209 ttcaccagccatgttctcatccttc 185
>dbj|AK065345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013008D19, full
insert sequence
Length = 3406
Score = 232 bits (117), Expect = 4e-058
Identities = 186/209 (88%)
Strand = Plus / Minus
Query: 843 tacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttc 902
||||| |||||||||||||||||||| |||||||| | ||| || |||||||| ||||||
Sbjct: 2783 tacccgcagatatctggtccaaacatgatgctgtacggtgtctcgccaccaaacttcttc 2724
Query: 903 tggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcg 962
||| | ||||| || || |||||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 2723 tggccaacatcgccgccaagcaatttcacgtagccgccgccgcagtcgagcttctgctcg 2664
Query: 963 tgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcg 1022
|||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 2663 tgcttcaccgagaactgcagcacgagggtcttgtccttgttgctgaactcagggtactcg 2604
Query: 1023 gctgaaatggcatagaacctgtaatcctc 1051
|| |||||||| ||||| ||||| |||||
Sbjct: 2603 gccgaaatggcgtagaatctgtagtcctc 2575
>gb|AU312235.1|AU312235 AU312235 Oryza sativa pistil cDNA Oryza sativa (japonica
cultivar-group) cDNA clone JRP2272, mRNA sequence
Length = 442
Score = 230 bits (116), Expect = 1e-057
Identities = 216/253 (85%)
Strand = Plus / Minus
Query: 881 tgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccacc 940
|||||| |||||||||||||||||||| ||||||||||| ||||| ||||| || |||||
Sbjct: 437 tgtgtccccaccaaatttcttctggtcnacatcaccaccaagcaacttgacatatccacc 378
Query: 941 gccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatcctt 1000
|| ||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 377 accacagtcaagcttttgctcatgctttacagagaactgcagcaccagggttttatcctt 318
Query: 1001 gttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcggaggnntg 1060
||||||||| || ||||| || |||||||| || ||||||||||| ||||| |||| ||
Sbjct: 317 gttgctgaattctgggtactccgctgaaatagcgtagaacctgtagtcctcagaggtttg 258
Query: 1061 aatacctttgtcctcggcatctccattccattttcccgaagtnnnnnnnnattcaccagc 1120
|||||||||||||| | |||||||||||| || || || || ||||||||||
Sbjct: 257 gatacctttgtcctcaggatctccattccacttcccagatgtgtggttccattcaccagc 198
Query: 1121 catgttctcatcc 1133
|||||||||||||
Sbjct: 197 catgttctcatcc 185
>gb|CF324022.1|CF324022 HDN--05-G16.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--05-G16, mRNA sequence
Length = 530
Score = 218 bits (110), Expect = 6e-054
Identities = 161/178 (90%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttct 900
||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 194 tgtacccacagatgtctggtccaaacataatgctgtacggtgtgtccccaccaaatttct 135
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| ||||||||||| ||||| ||||| || ||||| || ||||||||||| ||||
Sbjct: 134 tctggtcaacatcaccaccaagcaacttgacatatccaccaccacagtcaagcttttgct 75
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggta 1018
| ||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 74 catgctttacagagaactgcagcaccagggttttatccttgttgctgaattctgggta 17
>dbj|AK070712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060M04, full
insert sequence
Length = 1780
Score = 218 bits (110), Expect = 6e-054
Identities = 204/236 (86%)
Strand = Plus / Minus
Query: 843 tacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttc 902
||||| |||||||||||||||||||| |||||||| | || || |||||||| ||||||
Sbjct: 539 tacccgcagatatctggtccaaacatgatgctgtacggcgtctcgccaccaaacttcttc 480
Query: 903 tggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcg 962
||||| || || ||||| |||||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 479 tggtcaacgtcgccaccgagcaatttcacgtagccgccgccgcagtcgagcttctgctcg 420
Query: 963 tgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcg 1022
|||||||| |||||||||||||| |||||||| |||||| |||||||||||||||| | |
Sbjct: 419 tgcttcaccgagaactgcagcacgagggtcttgtccttgctgctgaactcagggtacttg 360
Query: 1023 gctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggc 1078
|| |||||||| ||||| ||||| ||||| || | || ||||| ||||| |||||
Sbjct: 359 gccgaaatggcgtagaatctgtagtcctctgacgtctggatacccttgtcgtcggc 304
>ref|XM_470161.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1329
Score = 218 bits (110), Expect = 6e-054
Identities = 204/236 (86%)
Strand = Plus / Minus
Query: 843 tacccacagatatctggtccaaacataatgctgtaagatgtgtctccaccaaatttcttc 902
||||| |||||||||||||||||||| |||||||| | || || |||||||| ||||||
Sbjct: 434 tacccgcagatatctggtccaaacatgatgctgtacggcgtctcgccaccaaacttcttc 375
Query: 903 tggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgctcg 962
||||| || || ||||| |||||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 374 tggtcaacgtcgccaccgagcaatttcacgtagccgccgccgcagtcgagcttctgctcg 315
Query: 963 tgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtattcg 1022
|||||||| |||||||||||||| |||||||| |||||| |||||||||||||||| | |
Sbjct: 314 tgcttcaccgagaactgcagcacgagggtcttgtccttgctgctgaactcagggtacttg 255
Query: 1023 gctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggc 1078
|| |||||||| ||||| ||||| ||||| || | || ||||| ||||| |||||
Sbjct: 254 gccgaaatggcgtagaatctgtagtcctctgacgtctggatacccttgtcgtcggc 199
>gb|D24386.1|D24386 RICR1821A Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R1821_1A, mRNA sequence
Length = 416
Score = 202 bits (102), Expect = 3e-049
Identities = 200/236 (84%)
Strand = Plus / Minus
Query: 901 tctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaagcttctgct 960
||||||| ||||||||||| ||||| ||||| || ||||| || ||||||||||| ||||
Sbjct: 416 tctggtcaacatcaccaccaagcaacttgacatatccaccaccacagtcaagcttttgct 357
Query: 961 cgtgcttcacagagaactgcagcaccagggtcttatccttgttgctgaactcagggtatt 1020
| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| |
Sbjct: 356 catgctttacagagaactgcagcaccagggttttatccttgttgctgaattctgggtact 297
Query: 1021 cggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttgtcctcggcat 1080
| |||||||| || ||||||||||| ||||| |||| || |||||||||||||| | ||
Sbjct: 296 ccgctgaaatagcgtagaacctgtagtcctcagaggtttggatacctttgtcctcaggat 237
Query: 1081 ctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctcatccttc 1136
|||||||||| || || || || ||||||||||||||||||||||||||
Sbjct: 236 ctccattccacttcccagatgtgtggttccattcaccagccatgttctcatccttc 181
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete
sequence
Length = 154555
Score = 198 bits (100), Expect = 5e-048
Identities = 148/164 (90%)
Strand = Plus / Minus
Query: 888 ccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcag 947
|||||||| ||||||||||| ||||| || || |||||||| |||||||| |||||||||
Sbjct: 56847 ccaccaaacttcttctggtcaacatcgccgccaagcaatttcacgtagccgccgccgcag 56788
Query: 948 tcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctg 1007
|| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 56787 tcgagcttctgctcgtgcttcaccgagaactgcagcacgagggtcttgtccttgttgctg 56728
Query: 1008 aactcagggtattcggctgaaatggcatagaacctgtaatcctc 1051
||||||||||| ||||| |||||||| ||||| ||||| |||||
Sbjct: 56727 aactcagggtactcggccgaaatggcgtagaatctgtagtcctc 56684
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 843 tacccacagatatctggtccaaacataatgctg 875
||||| |||||||||||||||||||| ||||||
Sbjct: 56980 tacccgcagatatctggtccaaacatgatgctg 56948
>gb|AACV01008131.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg008131, whole
genome shotgun sequence
Length = 26815
Score = 198 bits (100), Expect = 5e-048
Identities = 148/164 (90%)
Strand = Plus / Minus
Query: 888 ccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcag 947
|||||||| ||||||||||| ||||| || || |||||||| |||||||| |||||||||
Sbjct: 20482 ccaccaaacttcttctggtcaacatcgccgccaagcaatttcacgtagccgccgccgcag 20423
Query: 948 tcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctg 1007
|| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 20422 tcgagcttctgctcgtgcttcaccgagaactgcagcacgagggtcttgtccttgttgctg 20363
Query: 1008 aactcagggtattcggctgaaatggcatagaacctgtaatcctc 1051
||||||||||| ||||| |||||||| ||||| ||||| |||||
Sbjct: 20362 aactcagggtactcggccgaaatggcgtagaatctgtagtcctc 20319
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 843 tacccacagatatctggtccaaacataatgctg 875
||||| |||||||||||||||||||| ||||||
Sbjct: 20615 tacccgcagatatctggtccaaacatgatgctg 20583
>ref|NT_107188.1| Oryza sativa (japonica cultivar-group)
Length = 1363716
Score = 198 bits (100), Expect = 5e-048
Identities = 148/164 (90%)
Strand = Plus / Plus
Query: 888 ccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcag 947
|||||||| ||||||||||| ||||| || || |||||||| |||||||| |||||||||
Sbjct: 97709 ccaccaaacttcttctggtcaacatcgccgccaagcaatttcacgtagccgccgccgcag 97768
Query: 948 tcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctg 1007
|| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 97769 tcgagcttctgctcgtgcttcaccgagaactgcagcacgagggtcttgtccttgttgctg 97828
Query: 1008 aactcagggtattcggctgaaatggcatagaacctgtaatcctc 1051
||||||||||| ||||| |||||||| ||||| ||||| |||||
Sbjct: 97829 aactcagggtactcggccgaaatggcgtagaatctgtagtcctc 97872
Score = 182 bits (92), Expect = 3e-043
Identities = 146/164 (89%)
Strand = Plus / Plus
Query: 888 ccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcag 947
|||||||| ||||||||||| || || ||||| |||||||| |||||||| |||||||||
Sbjct: 1308017 ccaccaaacttcttctggtcaacgtcgccaccgagcaatttcacgtagccgccgccgcag 1308076
Query: 948 tcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctg 1007
|| |||||||||||||||||||| |||||||||||||| |||||||| |||||| |||||
Sbjct: 1308077 tcgagcttctgctcgtgcttcaccgagaactgcagcacgagggtcttgtccttgctgctg 1308136
Query: 1008 aactcagggtattcggctgaaatggcatagaacctgtaatcctc 1051
||||||||||| | ||| |||||||| ||||| ||||| |||||
Sbjct: 1308137 aactcagggtacttggccgaaatggcgtagaatctgtagtcctc 1308180
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 843 tacccacagatatctggtccaaacataatgctg 875
||||| |||||||||||||||||||| ||||||
Sbjct: 1307879 tacccgcagatatctggtccaaacatgatgctg 1307911
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 843 tacccacagatatctggtccaaacataatgctg 875
||||| |||||||||||||||||||| ||||||
Sbjct: 97576 tacccgcagatatctggtccaaacatgatgctg 97608
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 198 bits (100), Expect = 5e-048
Identities = 148/164 (90%)
Strand = Plus / Plus
Query: 888 ccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcag 947
|||||||| ||||||||||| ||||| || || |||||||| |||||||| |||||||||
Sbjct: 7157188 ccaccaaacttcttctggtcaacatcgccgccaagcaatttcacgtagccgccgccgcag 7157247
Query: 948 tcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctg 1007
|| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 7157248 tcgagcttctgctcgtgcttcaccgagaactgcagcacgagggtcttgtccttgttgctg 7157307
Query: 1008 aactcagggtattcggctgaaatggcatagaacctgtaatcctc 1051
||||||||||| ||||| |||||||| ||||| ||||| |||||
Sbjct: 7157308 aactcagggtactcggccgaaatggcgtagaatctgtagtcctc 7157351
Score = 182 bits (92), Expect = 3e-043
Identities = 146/164 (89%)
Strand = Plus / Plus
Query: 888 ccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcag 947
|||||||| ||||||||||| || || ||||| |||||||| |||||||| |||||||||
Sbjct: 8370994 ccaccaaacttcttctggtcaacgtcgccaccgagcaatttcacgtagccgccgccgcag 8371053
Query: 948 tcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctg 1007
|| |||||||||||||||||||| |||||||||||||| |||||||| |||||| |||||
Sbjct: 8371054 tcgagcttctgctcgtgcttcaccgagaactgcagcacgagggtcttgtccttgctgctg 8371113
Query: 1008 aactcagggtattcggctgaaatggcatagaacctgtaatcctc 1051
||||||||||| | ||| |||||||| ||||| ||||| |||||
Sbjct: 8371114 aactcagggtacttggccgaaatggcgtagaatctgtagtcctc 8371157
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 843 tacccacagatatctggtccaaacataatgctg 875
||||| |||||||||||||||||||| ||||||
Sbjct: 8370856 tacccgcagatatctggtccaaacatgatgctg 8370888
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 843 tacccacagatatctggtccaaacataatgctg 875
||||| |||||||||||||||||||| ||||||
Sbjct: 7157055 tacccgcagatatctggtccaaacatgatgctg 7157087
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 198 bits (100), Expect = 5e-048
Identities = 148/164 (90%)
Strand = Plus / Plus
Query: 888 ccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcag 947
|||||||| ||||||||||| ||||| || || |||||||| |||||||| |||||||||
Sbjct: 34423351 ccaccaaacttcttctggtcaacatcgccgccaagcaatttcacgtagccgccgccgcag 34423410
Query: 948 tcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctg 1007
|| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 34423411 tcgagcttctgctcgtgcttcaccgagaactgcagcacgagggtcttgtccttgttgctg 34423470
Query: 1008 aactcagggtattcggctgaaatggcatagaacctgtaatcctc 1051
||||||||||| ||||| |||||||| ||||| ||||| |||||
Sbjct: 34423471 aactcagggtactcggccgaaatggcgtagaatctgtagtcctc 34423514
Score = 182 bits (92), Expect = 3e-043
Identities = 146/164 (89%)
Strand = Plus / Plus
Query: 888 ccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcag 947
|||||||| ||||||||||| || || ||||| |||||||| |||||||| |||||||||
Sbjct: 35637157 ccaccaaacttcttctggtcaacgtcgccaccgagcaatttcacgtagccgccgccgcag 35637216
Query: 948 tcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctg 1007
|| |||||||||||||||||||| |||||||||||||| |||||||| |||||| |||||
Sbjct: 35637217 tcgagcttctgctcgtgcttcaccgagaactgcagcacgagggtcttgtccttgctgctg 35637276
Query: 1008 aactcagggtattcggctgaaatggcatagaacctgtaatcctc 1051
||||||||||| | ||| |||||||| ||||| ||||| |||||
Sbjct: 35637277 aactcagggtacttggccgaaatggcgtagaatctgtagtcctc 35637320
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 843 tacccacagatatctggtccaaacataatgctg 875
||||| |||||||||||||||||||| ||||||
Sbjct: 35637019 tacccgcagatatctggtccaaacatgatgctg 35637051
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 843 tacccacagatatctggtccaaacataatgctg 875
||||| |||||||||||||||||||| ||||||
Sbjct: 34423218 tacccgcagatatctggtccaaacatgatgctg 34423250
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 198 bits (100), Expect = 5e-048
Identities = 148/164 (90%)
Strand = Plus / Plus
Query: 888 ccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcag 947
|||||||| ||||||||||| ||||| || || |||||||| |||||||| |||||||||
Sbjct: 33531774 ccaccaaacttcttctggtcaacatcgccgccaagcaatttcacgtagccgccgccgcag 33531833
Query: 948 tcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctg 1007
|| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 33531834 tcgagcttctgctcgtgcttcaccgagaactgcagcacgagggtcttgtccttgttgctg 33531893
Query: 1008 aactcagggtattcggctgaaatggcatagaacctgtaatcctc 1051
||||||||||| ||||| |||||||| ||||| ||||| |||||
Sbjct: 33531894 aactcagggtactcggccgaaatggcgtagaatctgtagtcctc 33531937
Score = 182 bits (92), Expect = 3e-043
Identities = 146/164 (89%)
Strand = Plus / Plus
Query: 888 ccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcag 947
|||||||| ||||||||||| || || ||||| |||||||| |||||||| |||||||||
Sbjct: 34740892 ccaccaaacttcttctggtcaacgtcgccaccgagcaatttcacgtagccgccgccgcag 34740951
Query: 948 tcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctg 1007
|| |||||||||||||||||||| |||||||||||||| |||||||| |||||| |||||
Sbjct: 34740952 tcgagcttctgctcgtgcttcaccgagaactgcagcacgagggtcttgtccttgctgctg 34741011
Query: 1008 aactcagggtattcggctgaaatggcatagaacctgtaatcctc 1051
||||||||||| | ||| |||||||| ||||| ||||| |||||
Sbjct: 34741012 aactcagggtacttggccgaaatggcgtagaatctgtagtcctc 34741055
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 843 tacccacagatatctggtccaaacataatgctg 875
||||| |||||||||||||||||||| ||||||
Sbjct: 34740754 tacccgcagatatctggtccaaacatgatgctg 34740786
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 843 tacccacagatatctggtccaaacataatgctg 875
||||| |||||||||||||||||||| ||||||
Sbjct: 33531641 tacccgcagatatctggtccaaacatgatgctg 33531673
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 198 bits (100), Expect = 5e-048
Identities = 148/164 (90%)
Strand = Plus / Plus
Query: 888 ccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcag 947
|||||||| ||||||||||| ||||| || || |||||||| |||||||| |||||||||
Sbjct: 33441264 ccaccaaacttcttctggtcaacatcgccgccaagcaatttcacgtagccgccgccgcag 33441323
Query: 948 tcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctg 1007
|| |||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct: 33441324 tcgagcttctgctcgtgcttcaccgagaactgcagcacgagggtcttgtccttgttgctg 33441383
Query: 1008 aactcagggtattcggctgaaatggcatagaacctgtaatcctc 1051
||||||||||| ||||| |||||||| ||||| ||||| |||||
Sbjct: 33441384 aactcagggtactcggccgaaatggcgtagaatctgtagtcctc 33441427
Score = 182 bits (92), Expect = 3e-043
Identities = 146/164 (89%)
Strand = Plus / Plus
Query: 888 ccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcag 947
|||||||| ||||||||||| || || ||||| |||||||| |||||||| |||||||||
Sbjct: 34650820 ccaccaaacttcttctggtcaacgtcgccaccgagcaatttcacgtagccgccgccgcag 34650879
Query: 948 tcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctg 1007
|| |||||||||||||||||||| |||||||||||||| |||||||| |||||| |||||
Sbjct: 34650880 tcgagcttctgctcgtgcttcaccgagaactgcagcacgagggtcttgtccttgctgctg 34650939
Query: 1008 aactcagggtattcggctgaaatggcatagaacctgtaatcctc 1051
||||||||||| | ||| |||||||| ||||| ||||| |||||
Sbjct: 34650940 aactcagggtacttggccgaaatggcgtagaatctgtagtcctc 34650983
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 843 tacccacagatatctggtccaaacataatgctg 875
||||| |||||||||||||||||||| ||||||
Sbjct: 34650682 tacccgcagatatctggtccaaacatgatgctg 34650714
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 843 tacccacagatatctggtccaaacataatgctg 875
||||| |||||||||||||||||||| ||||||
Sbjct: 33441131 tacccgcagatatctggtccaaacatgatgctg 33441163
>dbj|AP003812.1| Oryza sativa (japonica cultivar-group) chromosome 7 clone OJ1145_E04,
*** SEQUENCING IN PROGRESS ***
Length = 119199
Score = 192 bits (97), Expect = 3e-046
Identities = 164/187 (87%)
Strand = Plus / Minus
Query: 881 tgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccacc 940
|||||| |||||||||||||||||||| ||||||||||| ||||| ||||| || |||||
Sbjct: 29802 tgtgtccccaccaaatttcttctggtcaacatcaccaccaagcaacttgacatatccacc 29743
Query: 941 gccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatcctt 1000
|| ||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 29742 accacagtcaagcttttgctcatgctttacagagaactgcagcaccagggttttatcctt 29683
Query: 1001 gttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcggaggnntg 1060
||||||||| || ||||| || |||||||| || ||||||||||| ||||| |||| ||
Sbjct: 29682 gttgctgaattctgggtactccgctgaaatagcgtagaacctgtagtcctcagaggtttg 29623
Query: 1061 aatacct 1067
||||||
Sbjct: 29622 gatacct 29616
Score = 61.9 bits (31), Expect = 8e-007
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctg 875
||||||||||||| |||||||||||||||||||||
Sbjct: 29927 tgtacccacagatgtctggtccaaacataatgctg 29893
Score = 52.0 bits (26), Expect = 7e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 1111 attcaccagccatgttctcatccttc 1136
||||||||||||||||||||||||||
Sbjct: 29498 attcaccagccatgttctcatccttc 29473
>dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1058_C08
Length = 117923
Score = 192 bits (97), Expect = 3e-046
Identities = 164/187 (87%)
Strand = Plus / Minus
Query: 881 tgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccacc 940
|||||| |||||||||||||||||||| ||||||||||| ||||| ||||| || |||||
Sbjct: 104489 tgtgtccccaccaaatttcttctggtcaacatcaccaccaagcaacttgacatatccacc 104430
Query: 941 gccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatcctt 1000
|| ||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 104429 accacagtcaagcttttgctcatgctttacagagaactgcagcaccagggttttatcctt 104370
Query: 1001 gttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcggaggnntg 1060
||||||||| || ||||| || |||||||| || ||||||||||| ||||| |||| ||
Sbjct: 104369 gttgctgaattctgggtactccgctgaaatagcgtagaacctgtagtcctcagaggtttg 104310
Query: 1061 aatacct 1067
||||||
Sbjct: 104309 gatacct 104303
Score = 61.9 bits (31), Expect = 8e-007
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctg 875
||||||||||||| |||||||||||||||||||||
Sbjct: 104614 tgtacccacagatgtctggtccaaacataatgctg 104580
Score = 52.0 bits (26), Expect = 7e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 1111 attcaccagccatgttctcatccttc 1136
||||||||||||||||||||||||||
Sbjct: 104185 attcaccagccatgttctcatccttc 104160
>dbj|AP006266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OSJNBa0003K21
Length = 158810
Score = 192 bits (97), Expect = 3e-046
Identities = 164/187 (87%)
Strand = Plus / Minus
Query: 881 tgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccacc 940
|||||| |||||||||||||||||||| ||||||||||| ||||| ||||| || |||||
Sbjct: 53740 tgtgtccccaccaaatttcttctggtcaacatcaccaccaagcaacttgacatatccacc 53681
Query: 941 gccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatcctt 1000
|| ||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 53680 accacagtcaagcttttgctcatgctttacagagaactgcagcaccagggttttatcctt 53621
Query: 1001 gttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcggaggnntg 1060
||||||||| || ||||| || |||||||| || ||||||||||| ||||| |||| ||
Sbjct: 53620 gttgctgaattctgggtactccgctgaaatagcgtagaacctgtagtcctcagaggtttg 53561
Query: 1061 aatacct 1067
||||||
Sbjct: 53560 gatacct 53554
Score = 61.9 bits (31), Expect = 8e-007
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctg 875
||||||||||||| |||||||||||||||||||||
Sbjct: 53865 tgtacccacagatgtctggtccaaacataatgctg 53831
Score = 52.0 bits (26), Expect = 7e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 1111 attcaccagccatgttctcatccttc 1136
||||||||||||||||||||||||||
Sbjct: 53436 attcaccagccatgttctcatccttc 53411
>gb|AACV01015560.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015560, whole
genome shotgun sequence
Length = 22662
Score = 192 bits (97), Expect = 3e-046
Identities = 164/187 (87%)
Strand = Plus / Plus
Query: 881 tgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccacc 940
|||||| |||||||||||||||||||| ||||||||||| ||||| ||||| || |||||
Sbjct: 21228 tgtgtccccaccaaatttcttctggtcaacatcaccaccaagcaacttgacatatccacc 21287
Query: 941 gccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatcctt 1000
|| ||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 21288 accacagtcaagcttttgctcatgctttacagagaactgcagcaccagggttttatcctt 21347
Query: 1001 gttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcggaggnntg 1060
||||||||| || ||||| || |||||||| || ||||||||||| ||||| |||| ||
Sbjct: 21348 gttgctgaattctgggtactccgctgaaatagcgtagaacctgtagtcctcagaggtttg 21407
Query: 1061 aatacct 1067
||||||
Sbjct: 21408 gatacct 21414
Score = 61.9 bits (31), Expect = 8e-007
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 841 tgtacccacagatatctggtccaaacataatgctg 875
||||||||||||| |||||||||||||||||||||
Sbjct: 21103 tgtacccacagatgtctggtccaaacataatgctg 21137
Score = 52.0 bits (26), Expect = 7e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1111 attcaccagccatgttctcatccttc 1136
||||||||||||||||||||||||||
Sbjct: 21532 attcaccagccatgttctcatccttc 21557
>ref|NT_079879.2| Oryza sativa (japonica cultivar-group)
Length = 11570172
Score = 192 bits (97), Expect = 3e-046
Identities = 164/187 (87%)
Strand = Plus / Minus
Query: 881 tgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccacc 940
|||||| |||||||||||||||||||| ||||||||||| ||||| ||||| || |||||
Sbjct: 8126789 tgtgtccccaccaaatttcttctggtcaacatcaccaccaagcaacttgacatatccacc 8126730
Query: 941 gccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatcctt 1000
|| ||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 8126729 accacagtcaagcttttgctcatgctttacagagaactgcagcaccagggttttatcctt 8126670
Query: 1001 gttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcggaggnntg 1060
||||||||| || ||||| || |||||||| || ||||||||||| ||||| |||| ||
Sbjct: 8126669 gttgctgaattctgggtactccgctgaaatagcgtagaacctgtagtcctcagaggtttg 8126610
Query: 1061 aatacct 1067
||||||
Sbjct: 8126609 gatacct 8126603
Score = 61.9 bits (31), Expect = 8e-007
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctg 875
||||||||||||| |||||||||||||||||||||
Sbjct: 8126914 tgtacccacagatgtctggtccaaacataatgctg 8126880
Score = 52.0 bits (26), Expect = 7e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 1111 attcaccagccatgttctcatccttc 1136
||||||||||||||||||||||||||
Sbjct: 8126485 attcaccagccatgttctcatccttc 8126460
>gb|CH401221.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000058 genomic
scaffold, whole genome shotgun sequence
Length = 3500188
Score = 192 bits (97), Expect = 3e-046
Identities = 164/187 (87%)
Strand = Plus / Minus
Query: 881 tgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccacc 940
|||||| |||||||||||||||||||| ||||||||||| ||||| ||||| || |||||
Sbjct: 1996701 tgtgtccccaccaaatttcttctggtcaacatcaccaccaagcaacttgacatatccacc 1996642
Query: 941 gccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatcctt 1000
|| ||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 1996641 accacagtcaagcttttgctcatgctttacagagaactgcagcaccagggttttatcctt 1996582
Query: 1001 gttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcggaggnntg 1060
||||||||| || ||||| || |||||||| || ||||||||||| ||||| |||| ||
Sbjct: 1996581 gttgctgaattctgggtactccgctgaaatagcgtagaacctgtagtcctcagaggtttg 1996522
Query: 1061 aatacct 1067
||||||
Sbjct: 1996521 gatacct 1996515
Score = 61.9 bits (31), Expect = 8e-007
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctg 875
||||||||||||| |||||||||||||||||||||
Sbjct: 1996826 tgtacccacagatgtctggtccaaacataatgctg 1996792
Score = 52.0 bits (26), Expect = 7e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 1111 attcaccagccatgttctcatccttc 1136
||||||||||||||||||||||||||
Sbjct: 1996397 attcaccagccatgttctcatccttc 1996372
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 192 bits (97), Expect = 3e-046
Identities = 164/187 (87%)
Strand = Plus / Minus
Query: 881 tgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccacc 940
|||||| |||||||||||||||||||| ||||||||||| ||||| ||||| || |||||
Sbjct: 8050326 tgtgtccccaccaaatttcttctggtcaacatcaccaccaagcaacttgacatatccacc 8050267
Query: 941 gccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatcctt 1000
|| ||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 8050266 accacagtcaagcttttgctcatgctttacagagaactgcagcaccagggttttatcctt 8050207
Query: 1001 gttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcggaggnntg 1060
||||||||| || ||||| || |||||||| || ||||||||||| ||||| |||| ||
Sbjct: 8050206 gttgctgaattctgggtactccgctgaaatagcgtagaacctgtagtcctcagaggtttg 8050147
Query: 1061 aatacct 1067
||||||
Sbjct: 8050146 gatacct 8050140
Score = 101 bits (51), Expect = 9e-019
Identities = 138/167 (82%)
Strand = Plus / Minus
Query: 678 gttacattctctgggagctcctctttgattggcttcattttctcacgtgatccaaccttt 737
|||||||| ||||| || || |||||||||||||||| || ||| ||||||||| ||||
Sbjct: 27851029 gttacattttctggaagttcatctttgattggcttcaacttttcatgtgatccaagcttt 27850970
Query: 738 gagattgcaagacgaattgcggtggctatatcaggtgtcagccctacttccctgcaaaac 797
| || |||||||| || | |||||| ||| |||| || ||||| ||| || |||
Sbjct: 27850969 gtaatggcaagacggatctgtgaggctatctcatgtgtaagtcctacctcctcacataac 27850910
Query: 798 ctactccagtccatctcacatccttctcgagcagcatcaagaatgta 844
||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 27850909 ctactccagtccatctcacatccatctcgagcagcatcaagtatgta 27850863
Score = 61.9 bits (31), Expect = 8e-007
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctg 875
||||||||||||| |||||||||||||||||||||
Sbjct: 8050451 tgtacccacagatgtctggtccaaacataatgctg 8050417
Score = 52.0 bits (26), Expect = 7e-004
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 613 taccaaagacttgctctgacaatccacacccctcaatagtcaggaatgtcttgatcatgt 672
||||||| ||||| || ||||||||| |||||||| | || |||||||| |||||| |
Sbjct: 27851258 taccaaaaacttgatccgacaatccaagtccctcaattgccaagaatgtctggatcatct 27851199
Query: 673 cataagttac 682
||||||||||
Sbjct: 27851198 cataagttac 27851189
Score = 52.0 bits (26), Expect = 7e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 1111 attcaccagccatgttctcatccttc 1136
||||||||||||||||||||||||||
Sbjct: 8050022 attcaccagccatgttctcatccttc 8049997
Score = 44.1 bits (22), Expect = 0.18
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 304 attctctcttggatcccttgaagtgcttggcaacatcctcca 345
||||||| || || || |||||||||||| ||||||||||||
Sbjct: 27851635 attctcttttcgacccattgaagtgcttgacaacatcctcca 27851594
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 192 bits (97), Expect = 3e-046
Identities = 164/187 (87%)
Strand = Plus / Minus
Query: 881 tgtgtctccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccacc 940
|||||| |||||||||||||||||||| ||||||||||| ||||| ||||| || |||||
Sbjct: 8170717 tgtgtccccaccaaatttcttctggtcaacatcaccaccaagcaacttgacatatccacc 8170658
Query: 941 gccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatcctt 1000
|| ||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct: 8170657 accacagtcaagcttttgctcatgctttacagagaactgcagcaccagggttttatcctt 8170598
Query: 1001 gttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcggaggnntg 1060
||||||||| || ||||| || |||||||| || ||||||||||| ||||| |||| ||
Sbjct: 8170597 gttgctgaattctgggtactccgctgaaatagcgtagaacctgtagtcctcagaggtttg 8170538
Query: 1061 aatacct 1067
||||||
Sbjct: 8170537 gatacct 8170531
Score = 109 bits (55), Expect = 4e-021
Identities = 139/167 (83%)
Strand = Plus / Minus
Query: 678 gttacattctctgggagctcctctttgattggcttcattttctcacgtgatccaaccttt 737
|||||||| ||||| || || |||||||||||||||| || ||| ||||||||| ||||
Sbjct: 28854106 gttacattttctggaagttcatctttgattggcttcaacttttcatgtgatccaagcttt 28854047
Query: 738 gagattgcaagacgaattgcggtggctatatcaggtgtcagccctacttccctgcaaaac 797
| || |||||||| || | |||||| ||| |||| || ||||| ||| ||||||
Sbjct: 28854046 gtaatggcaagacggatctgtgaggctatctcatgtgtaagtcctacctcctcacaaaac 28853987
Query: 798 ctactccagtccatctcacatccttctcgagcagcatcaagaatgta 844
||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 28853986 ctactccagtccatctcacatccatctcgagcagcatcaagtatgta 28853940
Score = 61.9 bits (31), Expect = 8e-007
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 841 tgtacccacagatatctggtccaaacataatgctg 875
||||||||||||| |||||||||||||||||||||
Sbjct: 8170842 tgtacccacagatgtctggtccaaacataatgctg 8170808
Score = 52.0 bits (26), Expect = 7e-004
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 613 taccaaagacttgctctgacaatccacacccctcaatagtcaggaatgtcttgatcatgt 672
||||||| ||||| || ||||||||| |||||||| | || |||||||| |||||| |
Sbjct: 28854335 taccaaaaacttgatccgacaatccaagtccctcaattgccaagaatgtctggatcatct 28854276
Query: 673 cataagttac 682
||||||||||
Sbjct: 28854275 cataagttac 28854266
Score = 52.0 bits (26), Expect = 7e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 1111 attcaccagccatgttctcatccttc 1136
||||||||||||||||||||||||||
Sbjct: 8170413 attcaccagccatgttctcatccttc 8170388
Score = 44.1 bits (22), Expect = 0.18
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 304 attctctcttggatcccttgaagtgcttggcaacatcctcca 345
||||||| || || || |||||||||||| ||||||||||||
Sbjct: 28854712 attctcttttcgacccattgaagtgcttgacaacatcctcca 28854671
>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete
sequence
Length = 164236
Score = 182 bits (92), Expect = 3e-043
Identities = 146/164 (89%)
Strand = Plus / Plus
Query: 888 ccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcag 947
|||||||| ||||||||||| || || ||||| |||||||| |||||||| |||||||||
Sbjct: 108537 ccaccaaacttcttctggtcaacgtcgccaccgagcaatttcacgtagccgccgccgcag 108596
Query: 948 tcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctg 1007
|| |||||||||||||||||||| |||||||||||||| |||||||| |||||| |||||
Sbjct: 108597 tcgagcttctgctcgtgcttcaccgagaactgcagcacgagggtcttgtccttgctgctg 108656
Query: 1008 aactcagggtattcggctgaaatggcatagaacctgtaatcctc 1051
||||||||||| | ||| |||||||| ||||| ||||| |||||
Sbjct: 108657 aactcagggtacttggccgaaatggcgtagaatctgtagtcctc 108700
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 843 tacccacagatatctggtccaaacataatgctg 875
||||| |||||||||||||||||||| ||||||
Sbjct: 108399 tacccgcagatatctggtccaaacatgatgctg 108431
>gb|AACV01008212.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg008212, whole
genome shotgun sequence
Length = 22754
Score = 182 bits (92), Expect = 3e-043
Identities = 146/164 (89%)
Strand = Plus / Minus
Query: 888 ccaccaaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcag 947
|||||||| ||||||||||| || || ||||| |||||||| |||||||| |||||||||
Sbjct: 19288 ccaccaaacttcttctggtcaacgtcgccaccgagcaatttcacgtagccgccgccgcag 19229
Query: 948 tcaagcttctgctcgtgcttcacagagaactgcagcaccagggtcttatccttgttgctg 1007
|| |||||||||||||||||||| |||||||||||||| |||||||| |||||| |||||
Sbjct: 19228 tcgagcttctgctcgtgcttcaccgagaactgcagcacgagggtcttgtccttgctgctg 19169
Query: 1008 aactcagggtattcggctgaaatggcatagaacctgtaatcctc 1051
||||||||||| | ||| |||||||| ||||| ||||| |||||
Sbjct: 19168 aactcagggtacttggccgaaatggcgtagaatctgtagtcctc 19125
Score = 50.1 bits (25), Expect = 0.003
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 843 tacccacagatatctggtccaaacataatgctg 875
||||| |||||||||||||||||||| ||||||
Sbjct: 19426 tacccgcagatatctggtccaaacatgatgctg 19394
>gb|C72767.1|C72767 C72767 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2206_1A, mRNA sequence
Length = 462
Score = 180 bits (91), Expect = 1e-042
Identities = 205/246 (83%), Gaps = 1/246 (0%)
Strand = Plus / Minus
Query: 892 caaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaa 951
|||| ||||||||||| |||| |||||| || || ||||| || ||||| || |||||||
Sbjct: 438 caaaattcttctggtcaacatnaccaccaagnaacttgacatatccaccaccacagtcaa 379
Query: 952 gcttctgctcgtgcttcacagagaactgcagcacc-agggtcttatccttgttgctgaac 1010
|||| ||||| ||||| |||||||||||||||||| |||| |||||||||||||||||
Sbjct: 378 gcttttgctcatgctttacagagaactgcagcacccngggttttatccttgttgctgaat 319
Query: 1011 tcagggtattcggctgaaatggcatagaacctgtaatcctcggaggnntgaatacctttg 1070
|| ||||| || |||||||| || ||||||||||| ||||| |||| || |||||||||
Sbjct: 318 tctgggtactccgctgaaatagcgtagaacctgtagtcctcagaggtttggatacctttg 259
Query: 1071 tcctcggcatctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctca 1130
||||| | |||||||||||| || || || || ||||||||||||||||||||
Sbjct: 258 tcctcaggatctccattccacttcccagatgtgtggttccattcaccagccatgttctca 199
Query: 1131 tccttc 1136
||||||
Sbjct: 198 tccttc 193
>gb|AU161312.1|AU161312 AU161312 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C61549, mRNA sequence
Length = 400
Score = 178 bits (90), Expect = 5e-042
Identities = 182/216 (84%)
Strand = Plus / Minus
Query: 921 agcaatttgacgtagccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgc 980
||||| ||||| || ||||| || ||||||||||| ||||| ||||| ||||||||||||
Sbjct: 397 agcaacttgacatatccaccaccacagtcaagcttttgctcatgctttacagagaactgc 338
Query: 981 agcaccagggtcttatccttgttgctgaactcagggtattcggctgaaatggcatagaac 1040
||||||||||| ||||||||||||||||| || ||||| || |||||||| || ||||||
Sbjct: 337 agcaccagggttttatccttgttgctgaattctgggtactccgctgaaatagcgtagaac 278
Query: 1041 ctgtaatcctcggaggnntgaatacctttgtcctcggcatctccattccattttcccgaa 1100
||||| ||||| |||| || |||||||||||||| | |||||||||||| || || ||
Sbjct: 277 ctgtagtcctcagaggtttggatacctttgtcctcaggatctccattccacttcccagat 218
Query: 1101 gtnnnnnnnnattcaccagccatgttctcatccttc 1136
|| ||||||||||||||||||||||||||
Sbjct: 217 gtgtggttccattcaccagccatgttctcatccttc 182
>gb|C28712.1|C28712 C28712 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C62154_1A, mRNA sequence
Length = 460
Score = 167 bits (84), Expect = 2e-038
Identities = 205/247 (82%), Gaps = 2/247 (0%)
Strand = Plus / Minus
Query: 892 caaatttcttctggtctacatcaccacccagcaatttgacgtagccaccgccgcagtcaa 951
|||||||||||||||| |||||||||| || || ||||| || ||||| || |||||||
Sbjct: 431 caaatttcttctggtcaacatcaccacnaagaaacttgacatatccaccaccacagtcaa 372
Query: 952 -gcttctgctcgtgcttcacagagaactgca-gcaccagggtcttatccttgttgctgaa 1009
|||| ||||| ||||| ||||||||||||| |||||||||| |||||||||||||| ||
Sbjct: 371 agcttttgctcatgctttacagagaactgcaagcaccagggttttatccttgttgctnaa 312
Query: 1010 ctcagggtattcggctgaaatggcatagaacctgtaatcctcggaggnntgaataccttt 1069
|| ||||| || |||||||| || ||||||||||| ||||| |||| || ||||||||
Sbjct: 311 ttctgggtactccgctgaaatagcgtagaacctgtagtcctcagaggtttggataccttt 252
Query: 1070 gtcctcggcatctccattccattttcccgaagtnnnnnnnnattcaccagccatgttctc 1129
||||| | |||||||||||| || || || || |||||||||||||||||||
Sbjct: 251 gtcctnaggatctccattccacttcccagatgtgtggttccattcaccagccatgttctc 192
Query: 1130 atccttc 1136
|||||||
Sbjct: 191 atccttc 185
>gb|AU078600.1|AU078600 AU078600 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C30005_2A, mRNA sequence
Length = 291
Score = 161 bits (81), Expect = 1e-036
Identities = 168/201 (83%)
Strand = Plus / Minus
Query: 936 ccaccgccgcagtcaagcttctgctcgtgcttcacagagaactgcagcaccagggtctta 995
||||| || ||||||||||| ||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 273 ccaccaccacagtcaagcttttgctcatgctttacagagaactgcagcaccagggtttta 214
Query: 996 tccttgttgctgaactcagggtattcggctgaaatggcatagaacctgtaatcctcggag 1055
|||||||||||||| || ||||| || |||||||| || ||||||||||| |||| |||
Sbjct: 213 tccttgttgctgaattctgggtactccgctgaaatagcgtagaacctgtagtcctnagag 154
Query: 1056 gnntgaatacctttgtcctcggcatctccattccattttcccgaagtnnnnnnnnattca 1115
| || ||||||||||||| | |||||||||||| || || || || |||||
Sbjct: 153 gtttggatacctttgtcctnaggatctccattccacttcccagatgtgtggttccattca 94
Query: 1116 ccagccatgttctcatccttc 1136
|||||||||||||||||||||
Sbjct: 93 ccagccatgttctcatccttc 73
>dbj|AK073504.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043G23, full
insert sequence
Length = 3115
Score = 151 bits (76), Expect = 1e-033
Identities = 193/232 (83%)
Strand = Plus / Minus
Query: 613 taccaaagacttgctctgacaatccacacccctcaatagtcaggaatgtcttgatcatgt 672
||||||| ||||| || ||||||||| |||||||| | || |||||||| |||||| |
Sbjct: 2420 taccaaaaacttgatccgacaatccaagtccctcaattgccaagaatgtctggatcatct 2361
Query: 673 cataagttacattctctgggagctcctctttgattggcttcattttctcacgtgatccaa 732
||||||||||||| ||||| || || |||||||||||||||| || ||| |||||||||
Sbjct: 2360 cataagttacattttctggaagttcatctttgattggcttcaacttttcatgtgatccaa 2301
Query: 733 cctttgagattgcaagacgaattgcggtggctatatcaggtgtcagccctacttccctgc 792
||||| || |||||||| || | |||||| ||| |||| || ||||| ||| |
Sbjct: 2300 gctttgtaatggcaagacggatctgtgaggctatctcatgtgtaagtcctacctcctcac 2241
Query: 793 aaaacctactccagtccatctcacatccttctcgagcagcatcaagaatgta 844
|||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 2240 aaaacctactccagtccatctcacatccatctcgagcagcatcaagtatgta 2189
Score = 58.0 bits (29), Expect = 1e-005
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 304 attctctcttggatcccttgaagtgcttggcaacatcctccagcgataccccattgc 360
||||||| || || || |||||||||||| |||||||||||| ||| ||||||||||
Sbjct: 2720 attctcttttcgacccattgaagtgcttgacaacatcctccaacgaaaccccattgc 2664
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,390,060
Number of Sequences: 438736
Number of extensions: 1390060
Number of successful extensions: 8411
Number of sequences better than 0.5: 76
Number of HSP's better than 0.5 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8041
Number of HSP's gapped (non-prelim): 362
length of query: 1238
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1217
effective length of database: 2,791,206,460
effective search space: 3396898261820
effective search space used: 3396898261820
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)