BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.536
(819 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB645303.1|CB645303 OSJNEb06O08.f OSJNEb Oryza sativa (j... 464 e-128
gb|CF277731.1|CF277731 14ETL--03-G03.b1 Rice etiolated leaf... 464 e-128
ref|XM_468444.1| Oryza sativa (japonica cultivar-group), mRNA 464 e-128
gb|CF323690.1|CF323690 HDN--04-I06.g1 OsHDAC1-overexpressin... 450 e-124
gb|CF331203.1|CF331203 NACL--07-D18.b1 Rice callus plasmid ... 448 e-123
gb|CF291267.1|CF291267 14ROOT--01-K01.g1 Rice root plasmid ... 438 e-120
gb|AU093169.1|AU093169 AU093169 Rice callus Oryza sativa (j... 434 e-119
dbj|AK119884.1| Oryza sativa (japonica cultivar-group) cDNA... 434 e-119
gb|CF305536.1|CF305536 CLD1--01-P21.b1 Rice cold treated le... 426 e-117
gb|CB645304.1|CB645304 OSJNEb06O08.r OSJNEb Oryza sativa (j... 416 e-114
ref|XM_475816.1| Oryza sativa (japonica cultivar-group), p... 414 e-113
gb|CV731758.1|CV731758 FLO--05-O21.b1 Rice flower lambda ph... 402 e-109
gb|CV733744.1|CV733744 FLO--08-M18.b1 Rice flower lambda ph... 402 e-109
gb|CV729101.1|CV729101 FLO--01-M08.b1 Rice flower lambda ph... 400 e-109
gb|CF300693.1|CF300693 7LEAF--05-E08.g1 Rice leaf plasmid c... 391 e-106
gb|AU092722.1|AU092722 AU092722 Rice callus Oryza sativa (j... 387 e-105
gb|CV730451.1|CV730451 FLO--03-P24.b1 Rice flower lambda ph... 375 e-101
gb|CF313982.1|CF313982 HD--02-F08.b1 OsHDAC1-overexpressing... 373 e-100
gb|CF331204.1|CF331204 NACL--07-D18.g1 Rice callus plasmid ... 369 2e-099
gb|CV732963.1|CV732963 FLO--07-K20.g1 Rice flower lambda ph... 367 6e-099
gb|AU077730.1|AU077730 AU077730 Rice cDNA from immature lea... 329 1e-087
ref|NM_191653.1| Oryza sativa (japonica cultivar-group), p... 327 5e-087
gb|AU089680.1|AU089680 AU089680 Rice callus Oryza sativa (j... 317 5e-084
gb|CV733745.1|CV733745 FLO--08-M18.g1 Rice flower lambda ph... 317 5e-084
gb|CF330253.1|CF330253 NACL--05-O09.b1 Rice callus plasmid ... 311 3e-082
dbj|AK066599.1| Oryza sativa (japonica cultivar-group) cDNA... 311 3e-082
gb|AU057623.1|AU057623 AU057623 Oryza sativa mature leaf Ni... 305 2e-080
gb|AU057622.1|AU057622 AU057622 Oryza sativa mature leaf Ni... 301 3e-079
gb|CB682632.1|CB682632 OSJNEf10C22.f OSJNEf Oryza sativa (j... 301 3e-079
gb|CF280323.1|CF280323 14ETL--06-P03.g1 Rice etiolated leaf... 299 1e-078
gb|C27632.1|C27632 C27632 Rice callus cDNA Oryza sativa (ja... 293 8e-077
gb|C27746.1|C27746 C27746 Rice callus cDNA Oryza sativa (ja... 293 8e-077
dbj|AK062099.1| Oryza sativa (japonica cultivar-group) cDNA... 285 2e-074
gb|D23395.1|D23395 RICC2748A Rice callus Oryza sativa (japo... 274 7e-071
gb|AU077731.1|AU077731 AU077731 Rice cDNA from immature lea... 264 7e-068
gb|AU063118.1|AU063118 AU063118 Rice callus Oryza sativa (j... 260 1e-066
gb|C27786.1|C27786 C27786 Rice callus cDNA Oryza sativa (ja... 248 4e-063
gb|CF300692.1|CF300692 7LEAF--05-E08.b1 Rice leaf plasmid c... 244 6e-062
gb|D23397.1|D23397 RICC2751A Rice callus Oryza sativa (japo... 240 1e-060
gb|D22671.1|D22671 RICC0835A Rice callus Oryza sativa (japo... 238 4e-060
gb|AU031211.1|AU031211 AU031211 Rice cDNA from immature lea... 238 4e-060
gb|CB000090.1|CB000090 S345W_C05 Rice cold stress germinati... 232 2e-058
gb|D23418.1|D23418 RICC2782A Rice callus Oryza sativa (japo... 226 1e-056
gb|AU065482.2|AU065482 AU065482 Rice callus Oryza sativa (j... 224 6e-056
gb|D15263.1|D15263 RICC0376A Rice callus Oryza sativa (japo... 218 4e-054
gb|CB682633.1|CB682633 OSJNEf10C22.r OSJNEf Oryza sativa (j... 202 2e-049
gb|CF277732.1|CF277732 14ETL--03-G03.g1 Rice etiolated leaf... 198 3e-048
gb|AU058323.1|AU058323 AU058323 Oryza sativa Nipponbare imm... 188 3e-045
dbj|AP004878.3| Oryza sativa (japonica cultivar-group) geno... 174 5e-041
gb|AACV01005659.1| Oryza sativa (japonica cultivar-group) c... 174 5e-041
gb|AACV01012641.1| Oryza sativa (japonica cultivar-group) c... 174 5e-041
ref|NT_107182.1| Oryza sativa (japonica cultivar-group) 174 5e-041
ref|NT_107219.1| Oryza sativa (japonica cultivar-group) 174 5e-041
dbj|AP004020.3| Oryza sativa (japonica cultivar-group) geno... 174 5e-041
gb|AC104713.3| Oryza sativa (japonica cultivar-group) chrom... 174 5e-041
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 174 5e-041
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 174 5e-041
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 174 5e-041
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 174 5e-041
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 174 5e-041
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 174 5e-041
gb|CX728936.1|CX728936 OSJNEf16H22.r OSJNEf Oryza sativa (j... 168 3e-039
gb|AU166184.1|AU166184 AU166184 Rice immature leaf includin... 139 3e-030
gb|AACV01012640.1| Oryza sativa (japonica cultivar-group) c... 139 3e-030
gb|C20274.1|C20274 C20274 Rice panicle at ripening stage Or... 135 4e-029
gb|AU031212.1|AU031212 AU031212 Rice cDNA from immature lea... 133 2e-028
gb|CF330254.1|CF330254 NACL--05-O09.g1 Rice callus plasmid ... 129 3e-027
gb|AQ291910.1|AQ291910 nbxb0040I16r CUGI Rice BAC Library O... 121 6e-025
dbj|AG022146.2| Oryza sativa (japonica cultivar-group) DNA,... 121 6e-025
gb|CF328967.1|CF328967 NACL--04-B20.b1 Rice callus plasmid ... 121 6e-025
gb|AACV01002189.1| Oryza sativa (japonica cultivar-group) c... 121 6e-025
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 121 6e-025
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 121 6e-025
dbj|AP003381.3| Oryza sativa (japonica cultivar-group) geno... 121 6e-025
dbj|AP003273.3| Oryza sativa (japonica cultivar-group) geno... 121 6e-025
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 121 6e-025
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 121 6e-025
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 121 6e-025
gb|CF328968.1|CF328968 NACL--04-B20.g1 Rice callus plasmid ... 119 2e-024
gb|CF333994.1|CF333994 JMT--03-B23.b1 AtJMT-overexpressing ... 111 6e-022
gb|CF333995.1|CF333995 JMT--03-B23.g1 AtJMT-overexpressing ... 111 6e-022
gb|AU082911.1|AU082911 AU082911 Rice callus Oryza sativa (j... 105 4e-020
gb|CB685776.1|CB685776 OSJNEf16H22.f OSJNEf Oryza sativa (j... 70 2e-009
gb|CV721002.1|CV721002 YBH--02-I24.b1 Rice before heading y... 68 8e-009
gb|AU312125.1|AU312125 AU312125 Oryza sativa anther cDNA Or... 58 8e-006
gb|DU168437.1|DU168437 UCDRGT3451_5.1 UCD RGT Rice Insertio... 50 0.002
>gb|CB645303.1|CB645303 OSJNEb06O08.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb06O08 5', mRNA sequence
Length = 570
Score = 464 bits (234), Expect = e-128
Identities = 363/406 (89%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 503 ggctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgag 444
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|| ||||| |||| |||| ||||||||||| |||||||| |||||||| | |||||||
Sbjct: 443 ctaagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctgg 384
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||||||| |||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 383 ttcttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtggtagagc 324
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || | |||||||||||||||||||| || |||||||||||||||| |||||||
Sbjct: 323 ttagctggggcattctgcttcttggtcttggtcgtggagaggaccacagccgcgtccttt 264
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
||| | | |||||||||||| || || |||||||| || |||||||||| ||||||||||
Sbjct: 263 ccacctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggag 204
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| |||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 203 tgaacattgtacaggttgttgggctccttggtgaactgcaccttggcattgctgtttcca 144
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccaga 706
||||||||||| |||||| ||||||||||| ||||||||| |||||
Sbjct: 143 aactgcttcacgaggaagcagttgttcttcttcacaatctcccaga 98
>gb|CF277731.1|CF277731 14ETL--03-G03.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--03-G03, mRNA sequence
Length = 676
Score = 464 bits (234), Expect = e-128
Identities = 363/406 (89%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 513 ggctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgag 454
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|| ||||| |||| |||| ||||||||||| |||||||| |||||||| | |||||||
Sbjct: 453 ctaagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctgg 394
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||||||| |||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 393 ttcttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtggtagagc 334
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || | |||||||||||||||||||| || |||||||||||||||| |||||||
Sbjct: 333 ttagctggggcattctgcttcttggtcttggtcgtggagaggaccacagccgcgtccttt 274
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
||| | | |||||||||||| || || |||||||| || |||||||||| ||||||||||
Sbjct: 273 ccacctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggag 214
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| |||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 213 tgaacattgtacaggttgttgggctccttggtgaactgcaccttggcattgctgtttcca 154
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccaga 706
||||||||||| |||||| ||||||||||| ||||||||| |||||
Sbjct: 153 aactgcttcacgaggaagcagttgttcttcttcacaatctcccaga 108
>ref|XM_468444.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 444
Score = 464 bits (234), Expect = e-128
Identities = 363/406 (89%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 431 ggctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgag 372
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|| ||||| |||| |||| ||||||||||| |||||||| |||||||| | |||||||
Sbjct: 371 ctaagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctgg 312
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||||||| |||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 311 ttcttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtggtagagc 252
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || | |||||||||||||||||||| || |||||||||||||||| |||||||
Sbjct: 251 ttagctggggcattctgcttcttggtcttggtcgtggagaggaccacagccgcgtccttt 192
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
||| | | |||||||||||| || || |||||||| || |||||||||| ||||||||||
Sbjct: 191 ccacctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggag 132
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| |||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 131 tgaacattgtacaggttgttgggctccttggtgaactgcaccttggcattgctgtttcca 72
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccaga 706
||||||||||| |||||| ||||||||||| ||||||||| |||||
Sbjct: 71 aactgcttcacgaggaagcagttgttcttcttcacaatctcccaga 26
>gb|CF323690.1|CF323690 HDN--04-I06.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--04-I06, mRNA sequence
Length = 500
Score = 450 bits (227), Expect = e-124
Identities = 350/391 (89%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 397 ggctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgag 338
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|| ||||| |||| |||| ||||||||||| |||||||| |||||||| | |||||||
Sbjct: 337 ctaagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctgg 278
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||||||| |||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 277 ttcttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtggtagagc 218
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || | |||||||||||||||||||| || |||||||||||||||| |||||||
Sbjct: 217 ttagctggggcattctgcttcttggtcttggtcgtggagaggaccacagccgcgtccttt 158
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
||| | | |||||||||||| || || |||||||| || |||||||||| ||||||||||
Sbjct: 157 ccacctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggag 98
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| |||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 97 tgaacattgtacaggttgttgggctccttggtgaactgcaccttggcattgctgtttcca 38
Query: 661 aactgcttcaccaggaaggagttgttcttcc 691
||||||||||| |||||| ||||||||||||
Sbjct: 37 aactgcttcacgaggaagcagttgttcttcc 7
>gb|CF331203.1|CF331203 NACL--07-D18.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--07-D18, mRNA sequence
Length = 608
Score = 448 bits (226), Expect = e-123
Identities = 361/406 (88%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
|||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||
Sbjct: 506 ggctgcctgttcttcttcttcacaccagacttggcaacctggaggccgcggtacactgag 447
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|| ||||| |||| |||| ||||||||||| |||||||| |||||||| | |||||||
Sbjct: 446 ctaagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctgg 387
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||||||| |||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 386 ttcttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtggtagagc 327
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || | |||||||||||||||| ||| || |||||||||||||||| |||||||
Sbjct: 326 ttagctggggcattctgcttcttggtctgggtcgtggagaggaccacagccgcgtccttt 267
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
||| | | |||||||||||| || || |||||||| || |||||||||| ||||||||||
Sbjct: 266 ccacctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggag 207
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| |||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 206 tgaacattgtacaggttgttgggctccttggtgaactgcaccttggcattgctgtttcca 147
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccaga 706
||||||||||| |||||| ||||||||||| ||||||||| |||||
Sbjct: 146 aactgcttcacgaggaagcagttgttcttcttcacaatctcccaga 101
>gb|CF291267.1|CF291267 14ROOT--01-K01.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-K01, mRNA sequence
Length = 514
Score = 438 bits (221), Expect = e-120
Identities = 344/385 (89%)
Strand = Plus / Minus
Query: 322 acaccagacttggcaacctggaggctgcggtacacagagctcagcctaccaagggccgac 381
||||||||||||||||||||||||||||||||||| ||||| ||||| |||| |||| |
Sbjct: 510 acaccagacttggcaacctggaggctgcggtacactgagctaagccttgcaagagccggc 451
Query: 382 ttggtcagatcaggcctgtaatagttgtcgccaacctggtttttcacagccttggccatc 441
||||||||||| |||||||| |||||||| | ||||||||| || |||||||| ||||||
Sbjct: 450 ttggtcagatctggcctgtagtagttgtcactaacctggttcttgacagccttagccatc 391
Query: 442 ttgcggaactccttgcgcattacagacttgtggctgagcttcgcgggtgtgttctgcttc 501
|||||||||||||||||||| |||||||||||| |||||| || || | |||||||||
Sbjct: 390 ttgcggaactccttgcgcatcacagacttgtggtagagcttagctggggcattctgcttc 331
Query: 502 ttggtcttggtagtagagaggaccacagccgagtcctttccagcagctggctggatcgtt 561
||||||||||| || |||||||||||||||| |||||||||| | | ||||||||||||
Sbjct: 330 ttggtcttggtcgtggagaggaccacagccgcgtcctttccacctgatggctggatcgtc 271
Query: 562 acagttttcttgtttgctaagccagagtacttgtaggagtgtacattgtagaggttgttg 621
|| || |||||||| || |||||||||| |||||||||||| |||||||| |||||||||
Sbjct: 270 acggtcttcttgttcgccaagccagagtgcttgtaggagtgaacattgtacaggttgttg 211
Query: 622 ggctccttggtgaactgcaccttggcattgccgttgccaaactgcttcaccaggaaggag 681
||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||| ||
Sbjct: 210 ggctccttggtgaactgcaccttggcattgctgtttccaaactgcttcacgaggaagcag 151
Query: 682 ttgttcttcctcacaatctgccaga 706
||||||||| ||||||||| |||||
Sbjct: 150 ttgttcttcttcacaatctcccaga 126
>gb|AU093169.1|AU093169 AU093169 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C0376, mRNA sequence
Length = 642
Score = 434 bits (219), Expect = e-119
Identities = 390/447 (87%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||
Sbjct: 496 ggctgcctgttcttcttcttggcaccagacttggaaacctggaggctgcggtacactgag 437
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|| ||||| |||| |||| ||||||||| ||||||||||| |||||||| | ||||||
Sbjct: 436 ctaagcctcgcaagagccggcttggtcaggtcaggcctgtagtagttgtcactcacctgg 377
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||||||| ||||| |||||||||||||||||||| |||||||||||| ||||
Sbjct: 376 ttcttgacagccttagccattttgcggaactccttgcgcatcacagacttgtggtagagc 317
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
||||| || | |||||||||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 316 ttcgctggggcattctgcttcttggtcttggttgtggagaggaccacggccgcgtccttc 257
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
| | | |||||||||||| || || |||||||| || |||||||||| ||||||||||
Sbjct: 256 acgcctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggag 197
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| |||||||| |||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 196 tggacattgtacaggttgttgggctccttggtgaactgcaccttggcattgctattcccg 137
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||||||||||||| ||||||||||| | ||||||| |||||||| | | | |||
Sbjct: 136 aactgcttcaccaggaagcagttgttcttcttgacaatctcccagatcaaaggctccgga 77
Query: 721 acggtcgccatttcccttcgccggaga 747
|| ||||||||||| ||||||||||||
Sbjct: 76 accgtcgccatttcgcttcgccggaga 50
>dbj|AK119884.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-G12, full
insert sequence
Length = 2472
Score = 434 bits (219), Expect = e-119
Identities = 390/447 (87%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||
Sbjct: 2241 ggctgcctgttcttcttcttggcaccagacttggaaacctggaggctgcggtacactgag 2182
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|| ||||| |||| |||| ||||||||| ||||||||||| |||||||| | ||||||
Sbjct: 2181 ctaagcctcgcaagagccggcttggtcaggtcaggcctgtagtagttgtcactcacctgg 2122
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||||||| ||||| |||||||||||||||||||| |||||||||||| ||||
Sbjct: 2121 ttcttgacagccttagccattttgcggaactccttgcgcatcacagacttgtggtagagc 2062
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
||||| || | |||||||||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 2061 ttcgctggggcattctgcttcttggtcttggttgtggagaggaccacggccgcgtccttc 2002
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
| | | |||||||||||| || || |||||||| || |||||||||| ||||||||||
Sbjct: 2001 acgcctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggag 1942
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| |||||||| |||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 1941 tggacattgtacaggttgttgggctccttggtgaactgcaccttggcattgctattcccg 1882
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||||||||||||| ||||||||||| | ||||||| |||||||| | | | |||
Sbjct: 1881 aactgcttcaccaggaagcagttgttcttcttgacaatctcccagatcaaaggctccgga 1822
Query: 721 acggtcgccatttcccttcgccggaga 747
|| ||||||||||| ||||||||||||
Sbjct: 1821 accgtcgccatttcgcttcgccggaga 1795
>gb|CF305536.1|CF305536 CLD1--01-P21.b1 Rice cold treated leaf plasmid cDNA library (CLD1)
Oryza sativa (japonica cultivar-group) cDNA clone
CLD1--01-P21, mRNA sequence
Length = 691
Score = 426 bits (215), Expect = e-117
Identities = 389/447 (87%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||
Sbjct: 509 ggctgcctgttcttcttcttggcaccagacttggaaacctggaggctgcggtacactgag 450
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|| ||||| |||| |||| ||||||||| ||||||||||| |||||||| | ||||||
Sbjct: 449 ctaagcctcgcaagagccggcttggtcaggtcaggcctgtagtagttgtcactcacctgg 390
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||||||| ||||| |||||||||||||||||||| |||||||||||| ||||
Sbjct: 389 ttcttgacagccttagccattttgcggaactccttgcgcatcacagacttgtggtagagc 330
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|||| || | |||||||||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 329 gtcgctggggcattctgcttcttggtcttggttgtggagaggaccacggccgcgtccttc 270
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
| | | |||||||||||| || || |||||||| || |||||||||| ||||||||||
Sbjct: 269 acgcctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggag 210
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| |||||||| |||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 209 tggacattgtacaggttgttgggctccttggtgaactgcaccttggcattgctattcccg 150
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgga 720
|||||||||||||||||| ||||||||||| | ||||||| |||||||| | | | |||
Sbjct: 149 aactgcttcaccaggaagcagttgttcttcttgacaatctcccagatcaaaggctccgga 90
Query: 721 acggtcgccatttcccttcgccggaga 747
|| ||||||||||| ||||||||||||
Sbjct: 89 accgtcgccatttcgcttcgccggaga 63
>gb|CB645304.1|CB645304 OSJNEb06O08.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb06O08 3', mRNA sequence
Length = 758
Score = 416 bits (210), Expect = e-114
Identities = 327/366 (89%)
Strand = Plus / Plus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 393 ggctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgag 452
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|| ||||| |||| |||| ||||||||||| |||||||| |||||||| | |||||||
Sbjct: 453 ctaagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctgg 512
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||||||| |||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 513 ttcttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtggtagagc 572
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || | |||||||||||||||||||| || |||||||||||||||| |||||||
Sbjct: 573 ttagctggggcattctgcttcttggtcttggtcgtggagaggaccacagccgcgtccttt 632
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
||| | | |||||||||||| || || |||||||| || |||||||||| ||||||||||
Sbjct: 633 ccacctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggag 692
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| |||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 693 tgaacattgtacaggttgttgggctccttggtgaactgcaccttggcattgctgtttcca 752
Query: 661 aactgc 666
||||||
Sbjct: 753 aactgc 758
>ref|XM_475816.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 444
Score = 414 bits (209), Expect = e-113
Identities = 359/409 (87%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||
Sbjct: 431 ggctgcctgttcttcttcttggcaccagacttggaaacctggaggctgcggtacactgag 372
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|| ||||| |||| |||| ||||||||| ||||||||||| |||||||| | ||||||
Sbjct: 371 ctaagcctcgcaagagccggcttggtcaggtcaggcctgtagtagttgtcactcacctgg 312
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||||||| ||||| |||||||||||||||||||| |||||||||||| ||||
Sbjct: 311 ttcttgacagccttagccattttgcggaactccttgcgcatcacagacttgtggtagagc 252
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
||||| || | |||||||||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 251 ttcgctggggcattctgcttcttggtcttggttgtggagaggaccacggccgcgtccttc 192
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
| | | |||||||||||| || || |||||||| || |||||||||| ||||||||||
Sbjct: 191 acgcctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggag 132
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcca 660
|| |||||||| |||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 131 tggacattgtacaggttgttgggctccttggtgaactgcaccttggcattgctattcccg 72
Query: 661 aactgcttcaccaggaaggagttgttcttcctcacaatctgccagatca 709
|||||||||||||||||| ||||||||||| | ||||||| ||||||||
Sbjct: 71 aactgcttcaccaggaagcagttgttcttcttgacaatctcccagatca 23
>gb|CV731758.1|CV731758 FLO--05-O21.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--05-O21,
mRNA sequence
Length = 531
Score = 402 bits (203), Expect = e-109
Identities = 374/431 (86%)
Strand = Plus / Minus
Query: 317 tcttgacaccagacttggcaacctggaggctgcggtacacagagctcagcctaccaaggg 376
||||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |
Sbjct: 531 tcttggcaccagacttggaaacctggaggctgcggtacactgagctaagcctcgcaagag 472
Query: 377 ccgacttggtcagatcaggcctgtaatagttgtcgccaacctggtttttcacagccttgg 436
||| ||||||||| ||||||||||| |||||||| | |||||||| || |||||||| |
Sbjct: 471 ccggcttggtcaggtcaggcctgtagtagttgtcactcacctggttcttgacagccttag 412
Query: 437 ccatcttgcggaactccttgcgcattacagacttgtggctgagcttcgcgggtgtgttct 496
|||| |||||||||||||||||||| |||||||||||| ||||||||| || | ||||
Sbjct: 411 ccattttgcggaactccttgcgcatcacagacttgtggtagagcttcgctggggcattct 352
Query: 497 gcttcttggtcttggtagtagagaggaccacagccgagtcctttccagcagctggctgga 556
|||||||||||||||| || ||||||||||| |||| |||||| | | | ||||||||
Sbjct: 351 gcttcttggtcttggttgtggagaggaccacggccgcgtccttcacgcctgatggctgga 292
Query: 557 tcgttacagttttcttgtttgctaagccagagtacttgtaggagtgtacattgtagaggt 616
|||| || || |||||||| || |||||||||| |||||||||||| |||||||| ||||
Sbjct: 291 tcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtacaggt 232
Query: 617 tgttgggctccttggtgaactgcaccttggcattgccgttgccaaactgcttcaccagga 676
|||||||||||||||||||||||||||||||||||| || || ||||||||||||||||
Sbjct: 231 tgttgggctccttggtgaactgcaccttggcattgctattcccgaactgcttcaccagga 172
Query: 677 aggagttgttcttcctcacaatctgccagatcagatcccctggaacggtcgccatttccc 736
|| ||||||||||| | ||||||| |||||||| | | | ||||| ||||||||||| |
Sbjct: 171 agcagttgttcttcttgacaatctcccagatcaaaggctccggaaccgtcgccatttcgc 112
Query: 737 ttcgccggaga 747
|||||||||||
Sbjct: 111 ttcgccggaga 101
>gb|CV733744.1|CV733744 FLO--08-M18.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--08-M18,
mRNA sequence
Length = 548
Score = 402 bits (203), Expect = e-109
Identities = 374/431 (86%)
Strand = Plus / Minus
Query: 317 tcttgacaccagacttggcaacctggaggctgcggtacacagagctcagcctaccaaggg 376
||||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |
Sbjct: 548 tcttggcaccagacttggaaacctggaggctgcggtacactgagctaagcctcgcaagag 489
Query: 377 ccgacttggtcagatcaggcctgtaatagttgtcgccaacctggtttttcacagccttgg 436
||| ||||||||| ||||||||||| |||||||| | |||||||| || |||||||| |
Sbjct: 488 ccggcttggtcaggtcaggcctgtagtagttgtcactcacctggttcttgacagccttag 429
Query: 437 ccatcttgcggaactccttgcgcattacagacttgtggctgagcttcgcgggtgtgttct 496
|||| |||||||||||||||||||| |||||||||||| ||||||||| || | ||||
Sbjct: 428 ccattttgcggaactccttgcgcatcacagacttgtggtagagcttcgctggggcattct 369
Query: 497 gcttcttggtcttggtagtagagaggaccacagccgagtcctttccagcagctggctgga 556
|||||||||||||||| || ||||||||||| |||| |||||| | | | ||||||||
Sbjct: 368 gcttcttggtcttggttgtggagaggaccacggccgcgtccttcacgcctgatggctgga 309
Query: 557 tcgttacagttttcttgtttgctaagccagagtacttgtaggagtgtacattgtagaggt 616
|||| || || |||||||| || |||||||||| |||||||||||| |||||||| ||||
Sbjct: 308 tcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtacaggt 249
Query: 617 tgttgggctccttggtgaactgcaccttggcattgccgttgccaaactgcttcaccagga 676
|||||||||||||||||||||||||||||||||||| || || ||||||||||||||||
Sbjct: 248 tgttgggctccttggtgaactgcaccttggcattgctattcccgaactgcttcaccagga 189
Query: 677 aggagttgttcttcctcacaatctgccagatcagatcccctggaacggtcgccatttccc 736
|| ||||||||||| | ||||||| |||||||| | | | ||||| ||||||||||| |
Sbjct: 188 agcagttgttcttcttgacaatctcccagatcaaaggctccggaaccgtcgccatttcgc 129
Query: 737 ttcgccggaga 747
|||||||||||
Sbjct: 128 ttcgccggaga 118
>gb|CV729101.1|CV729101 FLO--01-M08.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--01-M08,
mRNA sequence
Length = 494
Score = 400 bits (202), Expect = e-109
Identities = 376/434 (86%)
Strand = Plus / Minus
Query: 314 tcttcttgacaccagacttggcaacctggaggctgcggtacacagagctcagcctaccaa 373
|||||||| |||||||||||| ||||||||||||||||||||| ||||| ||||| |||
Sbjct: 494 tcttcttggcaccagacttggaaacctggaggctgcggtacactgagctaagcctcgcaa 435
Query: 374 gggccgacttggtcagatcaggcctgtaatagttgtcgccaacctggtttttcacagcct 433
| |||| ||||||||| ||||||||||| |||||||| | |||||||| || |||||||
Sbjct: 434 gagccggcttggtcaggtcaggcctgtagtagttgtcactcacctggttcttgacagcct 375
Query: 434 tggccatcttgcggaactccttgcgcattacagacttgtggctgagcttcgcgggtgtgt 493
| ||||| |||||||||||||||||||| |||||||||||| ||||||||| || | |
Sbjct: 374 tagccattttgcggaactccttgcgcatcacagacttgtggtagagcttcgctggggcat 315
Query: 494 tctgcttcttggtcttggtagtagagaggaccacagccgagtcctttccagcagctggct 553
||||||||||||||||||| || ||||||||||| |||| |||||| | | | |||||
Sbjct: 314 tctgcttcttggtcttggttgtggagaggaccacggccgcgtccttcacgcctgatggct 255
Query: 554 ggatcgttacagttttcttgtttgctaagccagagtacttgtaggagtgtacattgtaga 613
||||||| || || |||||||| || |||||||||| |||||||||||| |||||||| |
Sbjct: 254 ggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtaca 195
Query: 614 ggttgttgggctccttggtgaactgcaccttggcattgccgttgccaaactgcttcacca 673
||||||||||||||||||||||||||||||||||||||| || || |||||||||||||
Sbjct: 194 ggttgttgggctccttggtgaactgcaccttggcattgctattcccgaactgcttcacca 135
Query: 674 ggaaggagttgttcttcctcacaatctgccagatcagatcccctggaacggtcgccattt 733
||||| ||||||||||| | ||||||| |||||||| | | | ||||| | ||||||||
Sbjct: 134 ggaagcagttgttcttcttgacaatctcccagatcaaaggctccggaaccgccgccattt 75
Query: 734 cccttcgccggaga 747
| ||||||||||||
Sbjct: 74 cgcttcgccggaga 61
>gb|CF300693.1|CF300693 7LEAF--05-E08.g1 Rice leaf plasmid cDNA library II (7LEAF) Oryza
sativa (japonica cultivar-group) cDNA clone
7LEAF--05-E08, mRNA sequence
Length = 505
Score = 391 bits (197), Expect = e-106
Identities = 367/424 (86%)
Strand = Plus / Minus
Query: 323 caccagacttggcaacctggaggctgcggtacacagagctcagcctaccaagggccgact 382
|||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| ||
Sbjct: 504 caccagacttggaaacctggaggctgcggtacactgagctaagcctcgcaagagccggct 445
Query: 383 tggtcagatcaggcctgtaatagttgtcgccaacctggtttttcacagccttggccatct 442
||||||| ||||||||||| |||||||| | |||||||| || |||||||| |||||
Sbjct: 444 tggtcaggtcaggcctgtagtagttgtcactcacctggttcttgacagccttagccattn 385
Query: 443 tgcggaactccttgcgcattacagacttgtggctgagcttcgcgggtgtgttctgcttct 502
||||||||||||||||||| |||||||||||| ||||||||| || | ||||||||||
Sbjct: 384 tgcggaactccttgcgcatcacagacttgtggtagagcttcgctggggcattctgcttct 325
Query: 503 tggtcttggtagtagagaggaccacagccgagtcctttccagcagctggctggatcgtta 562
|||||||||| || ||||||||||| |||| |||||| | | | |||||||||||| |
Sbjct: 324 tggtcttggttgtggagaggaccacggccgcgtccttcacgcctgatggctggatcgtca 265
Query: 563 cagttttcttgtttgctaagccagagtacttgtaggagtgtacattgtagaggttgttgg 622
| || |||||||| || |||||||||| |||||||||||| |||||||| ||||||||||
Sbjct: 264 cggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtacaggttgttgg 205
Query: 623 gctccttggtgaactgcaccttggcattgccgttgccaaactgcttcaccaggaaggagt 682
|||||||||||||||||||||||||||||| || || |||||||||||||||||| |||
Sbjct: 204 gctccttggtgaactgcaccttggcattgctattcccgaactgcttcaccaggaagcagt 145
Query: 683 tgttcttcctcacaatctgccagatcagatcccctggaacggtcgccatttcccttcgcc 742
|||||||| | ||||||| |||||||| | | | ||||| ||||||||||| |||||||
Sbjct: 144 tgttcttcttgacaatctcccagatcaaaggctccggaaccgtcgccatttcgcttcgcc 85
Query: 743 ggag 746
||||
Sbjct: 84 ggag 81
>gb|AU092722.1|AU092722 AU092722 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C53064, mRNA sequence
Length = 605
Score = 387 bits (195), Expect = e-105
Identities = 308/346 (89%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 355 ggctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgag 296
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|| ||||| |||| |||| ||||||||||| |||||||| |||||||| | |||||||
Sbjct: 295 ctaagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctgg 236
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||||||| |||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 235 ttcttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtggtagagc 176
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || | |||||||||||||||||||| || |||||||||||||||| |||||||
Sbjct: 175 ttagctggggcattctgcttcttggtcttggtcgtggagaggaccacagccgcgtccttt 116
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
||| | | |||||||||||| || || |||||||| || |||||||||| ||||||||||
Sbjct: 115 ccacctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggag 56
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttgg 646
|| |||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 55 tgaacattgtacangttgttgggctccttggtgaactgcaccttgg 10
>gb|CV730451.1|CV730451 FLO--03-P24.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--03-P24,
mRNA sequence
Length = 530
Score = 375 bits (189), Expect = e-101
Identities = 367/425 (86%), Gaps = 1/425 (0%)
Strand = Plus / Minus
Query: 323 caccagacttggcaacctggaggctgcggtacacagagctcagcctaccaagggccgact 382
|||||||||||| ||||||||||||||||||||| ||||| ||||| |||| |||| ||
Sbjct: 527 caccagacttggaaacctggaggctgcggtacactgagctaagcctcgcaagagccggct 468
Query: 383 tggtcagatcaggcctgtaatagttgtcgccaacctggtttttcacagccttggccatct 442
||||||| ||||||||||| |||||||| | |||||||| || |||||||| ||||| |
Sbjct: 467 tggtcaggtcaggcctgtagtagttgtcactcacctggttcttgacagccttagccattt 408
Query: 443 tgcggaactccttgcgcattacagacttgtggctgagcttcgcgggtgtgttctgcttct 502
||||||||||||||||||| |||||||||||| ||||||||| || | ||||||||||
Sbjct: 407 tgcggaactccttgcgcatcacagacttgtggtagagcttcgctggggcattctgcttct 348
Query: 503 tggtcttggtagtagagaggaccacagccgagtcctttccagcagctggctggatcgtta 562
|||||||||| || ||||||||||| |||| |||||| | | | |||||||||||| |
Sbjct: 347 tggtcttggttgtggagaggaccacggccgcgtccttcacgcctgatggctggatcgtca 288
Query: 563 cagttttcttgtttgctaagccagagtacttgtaggagtgtacattgtagaggttgttgg 622
| || |||||||| || |||||||||| |||||||||||| |||||||| ||||||||||
Sbjct: 287 cggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtacaggttgttgg 228
Query: 623 gctccttggtgaactgcaccttggcattgccgttgccaaactgcttcaccaggaaggagt 682
||||||||||||||||||||||||| | || || || |||||||||||||||||| |||
Sbjct: 227 gctccttggtgaactgcaccttggc-tagctattcccgaactgcttcaccaggaagcagt 169
Query: 683 tgttcttcctcacaatctgccagatcagatcccctggaacggtcgccatttcccttcgcc 742
|||||||| | ||||||| |||||||| | | | ||||| ||||||||||| |||||||
Sbjct: 168 tgttcttcttgacaatctcccagatcaaaggctccggaaccgtcgccatttcgcttcgcc 109
Query: 743 ggaga 747
|||||
Sbjct: 108 ggaga 104
>gb|CF313982.1|CF313982 HD--02-F08.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--02-F08, mRNA sequence
Length = 472
Score = 373 bits (188), Expect = e-100
Identities = 353/408 (86%)
Strand = Plus / Minus
Query: 340 tggaggctgcggtacacagagctcagcctaccaagggccgacttggtcagatcaggcctg 399
||||||||||||||||| ||||| ||||| |||| |||| ||||||||| |||||||||
Sbjct: 472 tggaggctgcggtacactgagctaagcctcgcaagagccggcttggtcaggtcaggcctg 413
Query: 400 taatagttgtcgccaacctggtttttcacagccttggccatcttgcggaactccttgcgc 459
|| |||||||| | |||||||| || |||||||| ||||| ||||||||||||||||||
Sbjct: 412 tagtagttgtcactcacctggttcttgacagccttagccattttgcggaactccttgcgc 353
Query: 460 attacagacttgtggctgagcttcgcgggtgtgttctgcttcttggtcttggtagtagag 519
|| |||||||||||| ||||||||| || | |||||||||||||||||||| || |||
Sbjct: 352 atcacagacttgtggtagagcttcgctggggcattctgcttcttggtcttggttgtggag 293
Query: 520 aggaccacagccgagtcctttccagcagctggctggatcgttacagttttcttgtttgct 579
|||||||| |||| |||||| | | | |||||||||||| || || |||||||| ||
Sbjct: 292 aggaccacggccgcgtccttcacgcctgatggctggatcgtcacggtcttcttgttcgcc 233
Query: 580 aagccagagtacttgtaggagtgtacattgtagaggttgttgggctccttggtgaactgc 639
|||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 232 aagccagagtgcttgtaggagtggacattgtacaggttgttgggctccttggtgaactgc 173
Query: 640 accttggcattgccgttgccaaactgcttcaccaggaaggagttgttcttcctcacaatc 699
||||||||||||| || || |||||||||||||||||| ||||||||||| | ||||||
Sbjct: 172 accttggcattgctattcccgaactgcttcaccaggaagcagttgttcttcttgacaatc 113
Query: 700 tgccagatcagatcccctggaacggtcgccatttcccttcgccggaga 747
| |||||||| | | | ||||| ||||||||||| ||||||||||||
Sbjct: 112 tcccagatcaaaggctccggaaccgtcgccatttcgcttcgccggaga 65
>gb|CF331204.1|CF331204 NACL--07-D18.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--07-D18, mRNA sequence
Length = 561
Score = 369 bits (186), Expect = 2e-099
Identities = 309/350 (88%)
Strand = Plus / Plus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
|||||||||||||||||||| |||||| |||||||||||||||||| ||||||||| |||
Sbjct: 212 ggctgcctgttcttcttcttcacaccaaacttggcaacctggaggccgcggtacactgag 271
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|| ||||| |||| |||| ||||||||||| |||||||| |||||||| | |||||||
Sbjct: 272 ctaagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctgg 331
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||||||| |||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 332 ttcttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtggtagagc 391
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| | || | |||||||||||||||| ||| || |||||||||||||||| |||||||
Sbjct: 392 ttaactggggcattctgcttcttggtctgggtcgtggagaggaccacagccgcgtccttt 451
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
||| | | |||||||||||| || || |||||||| || |||||||||| ||||||||||
Sbjct: 452 ccacctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggag 511
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgcaccttggcatt 650
|| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tgaacattgtacaggttgttgggctccttggtgaactgcaccttggcatt 561
>gb|CV732963.1|CV732963 FLO--07-K20.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--07-K20,
mRNA sequence
Length = 535
Score = 367 bits (185), Expect = 6e-099
Identities = 361/420 (85%)
Strand = Plus / Minus
Query: 328 gacttggcaacctggaggctgcggtacacagagctcagcctaccaagggccgacttggtc 387
||||||| |||||||||| |||||||||| ||||| ||||| |||| |||| |||||||
Sbjct: 535 gacttggaaacctggaggntgcggtacactgagctaagcctcgcaagagccggcttggtc 476
Query: 388 agatcaggcctgtaatagttgtcgccaacctggtttttcacagccttggccatcttgcgg 447
|| ||||||||||| |||||||| | |||||||| || |||||||| ||||| ||||||
Sbjct: 475 aggtcaggcctgtagtagttgtcactcacctggttcttgacagccttagccattttgcgg 416
Query: 448 aactccttgcgcattacagacttgtggctgagcttcgcgggtgtgttctgcttcttggtc 507
|||||||||||||| |||||||||||| ||||||||| || | |||||||||||||||
Sbjct: 415 aactccttgcgcatcacagacttgtggtagagcttcgctggggcattctgcttcttggtc 356
Query: 508 ttggtagtagagaggaccacagccgagtcctttccagcagctggctggatcgttacagtt 567
|| || || ||||||||||| |||| |||||| | | | |||||||||||| || ||
Sbjct: 355 ttcgttgtggagaggaccacggccgcgtccttcacgcctgatggctggatcgtcacggtc 296
Query: 568 ttcttgtttgctaagccagagtacttgtaggagtgtacattgtagaggttgttgggctcc 627
|||||||| || |||||||||| |||||||||||| |||||||| |||||||||||||||
Sbjct: 295 ttcttgttcgccaagccagagtgcttgtaggagtggacattgtacaggttgttgggctcc 236
Query: 628 ttggtgaactgcaccttggcattgccgttgccaaactgcttcaccaggaaggagttgttc 687
||||||||||||||||||||||||| || || || ||||||||||||||| ||||||||
Sbjct: 235 ttggtgaactgcaccttggcattgctattcccgaaatgcttcaccaggaagcagttgttc 176
Query: 688 ttcctcacaatctgccagatcagatcccctggaacggtcgccatttcccttcgccggaga 747
||| | ||||||| |||||||| | | | ||||| ||||||||||| ||||||||||||
Sbjct: 175 ttcttgacaatctcccagatcaaaggctccggaaccgtcgccatttcgcttcgccggaga 116
>gb|AU077730.1|AU077730 AU077730 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61039_1A, mRNA sequence
Length = 477
Score = 329 bits (166), Expect = 1e-087
Identities = 383/448 (85%), Gaps = 6/448 (1%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
|||||||||| |||||||||| |||||||||||| |||||||||||||||||||| |||
Sbjct: 476 ggctgcctgt-cttcttcttggcaccagacttggaaacctggaggctgcggtacat-gag 419
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgcca-acctg 419
|| ||||| |||| ||| |||| |||| ||||||||||| |||||||| | |||||
Sbjct: 418 ctaagcctcgcaaga-ccggcttgttcaggtcaggcctgtagtagttgtcacttcacctg 360
Query: 420 gtttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgag 479
||| || |||||||| ||||| |||||||||||||||||||| |||||||||||| ||
Sbjct: 359 gttcttgacagccttagccattttgcggaactccttgcgcatcacagacttgtggtagan 300
Query: 480 cttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt 539
||||| || | |||||||||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 299 -ttcgctggggcattctgcttcttggtcttggttgtggagaggaccacggccgcgtcctt 241
Query: 540 tccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtagga 599
| | | |||||||||||| || || |||||||| || |||||||||| |||||||||
Sbjct: 240 cacgcctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtagga 181
Query: 600 gtgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgcc 659
||| |||||||| |||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 180 gtggacattgtacaggttgttgggctccttggtgaactgcaccttggcattgctattccc 121
Query: 660 aaactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcccctgg 719
|||||||||||||||||| ||||||||||| | ||||||| |||||||| | | | ||
Sbjct: 120 gaactgcttcaccaggaagcagttgttcttcttgacaatctcccagatcaaaggctccgg 61
Query: 720 aacggtcgccatttcccttcgccggaga 747
||| |||||||||| | |||||||||||
Sbjct: 60 aaccgtcgccattt-cnttcgccggaga 34
>ref|NM_191653.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 438
Score = 327 bits (165), Expect = 5e-087
Identities = 348/409 (85%)
Strand = Plus / Minus
Query: 303 ctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagagct 362
||||||||||||||| ||||||||||| ||||||||||||||||||||||| || | |||
Sbjct: 429 ctgcctgttcttctttttgacaccagatttggcaacctggaggctgcggtagactgcgct 370
Query: 363 cagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctggtt 422
|||||| |||| || | |||||| || ||||||| ||| |||||||||| ||||||||
Sbjct: 369 cagccttgcaagtgctggcttggtaaggtcaggccggtagtagttgtcgctgacctggtt 310
Query: 423 tttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagctt 482
|| |||||||||||||| |||||||||||||||||||| |||||||||||| ||| |
Sbjct: 309 cttgacagccttggccattttgcggaactccttgcgcatgacagacttgtggtagaggct 250
Query: 483 cgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttcc 542
|| || |||||||||||| |||||||| |||||||||||||| |||| ||||| ||
Sbjct: 249 agcaggcttgttctgcttctctgtcttggttgtagagaggaccactgccgtttccttacc 190
Query: 543 agcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggagtg 602
| || ||||||| ||| || |||||||||||||| | |||||| | |||||| |||||
Sbjct: 189 actggcaggctggaccgtcacggttttcttgtttgccaggccagaatgcttgtaagagtg 130
Query: 603 tacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgccaaa 662
|||||||| |||||||||||||||||| ||||||| |||||||||||||| ||||| ||
Sbjct: 129 gacattgtacaggttgttgggctccttgctgaactgaaccttggcattgccattgccgaa 70
Query: 663 ctgcttcaccaggaaggagttgttcttcctcacaatctgccagatcaga 711
|||||| |||||||| || ||||||||| | |||| || ||||| ||||
Sbjct: 69 ctgcttgaccaggaatgaattgttcttcttgacaagctcccagaccaga 21
>gb|AU089680.1|AU089680 AU089680 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C20036, mRNA sequence
Length = 500
Score = 317 bits (160), Expect = 5e-084
Identities = 294/340 (86%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||
Sbjct: 340 ggctgcctgttcttcttcttggcaccagacttggaaacctggaggctgcggtacactgag 281
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|| ||||| |||| |||| |||||||| ||||||||||| |||| ||| | ||||||
Sbjct: 280 ctaagcctcgcaagagccggnttggtcaggtcaggcctgtagtagtngtcactcacctgg 221
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||||||| ||||| |||||||||||||||||||| |||||||||||| ||||
Sbjct: 220 ttcttgacagccttagccattttgcggaactccttgcgcatcacagacttgtggtagagc 161
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
||||| || | ||| |||||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 160 ttcgctggggcattcngcttcttggtcttggttgtggagaggaccacggccgcgtccttc 101
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
| | | |||||||||||| || | |||||||| || |||||||||| ||||||||||
Sbjct: 100 acgcctgatggctggatcgtcacggncttcttgttcgccaagccagagtgcttgtaggag 41
Query: 601 tgtacattgtagaggttgttgggctccttggtgaactgca 640
|| |||||||| ||||||||||||||||||||||||||||
Sbjct: 40 tggacattgtacaggttgttgggctccttggtgaactgca 1
>gb|CV733745.1|CV733745 FLO--08-M18.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--08-M18,
mRNA sequence
Length = 492
Score = 317 bits (160), Expect = 5e-084
Identities = 286/328 (87%)
Strand = Plus / Plus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||
Sbjct: 165 ggctgcctgttcttcttcttggcaccagacttggaaacctggaggctgcggtacactgag 224
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|| ||||| |||| |||| ||||||||| ||||||||||| |||||||| | ||||||
Sbjct: 225 ctaagcctcgcaagagccggcttggtcaggtcaggcctgtagtagttgtcactcacctgg 284
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||||||| ||||| |||||||||||||||||||| |||||||||||| ||||
Sbjct: 285 ttcttgacagccttagccattttgcggaactccttgcgcatcacagacttgtggtagagc 344
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
||||| || | |||||||||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 345 ttcgctggggcattctgcttcttggtcttggttgtggagaggaccacggccgcgtccttc 404
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
| | | |||||||||||| || || |||||||| || |||||||||| ||||||||||
Sbjct: 405 acgcctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggag 464
Query: 601 tgtacattgtagaggttgttgggctcct 628
|| |||||||| ||||||||||||||||
Sbjct: 465 tggacattgtacaggttgttgggctcct 492
>gb|CF330253.1|CF330253 NACL--05-O09.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--05-O09, mRNA sequence
Length = 607
Score = 311 bits (157), Expect = 3e-082
Identities = 346/409 (84%)
Strand = Plus / Minus
Query: 303 ctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagagct 362
||||||||||||||| ||||||||||| ||||||||||||||||||||||| || | |||
Sbjct: 498 ctgcctgttcttctttttgacaccagatttggcaacctggaggctgcggtagactgcgct 439
Query: 363 cagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctggtt 422
|||||| |||| || | |||||| || ||||||| ||| |||||||||| ||||||||
Sbjct: 438 cagccttgcaagtgctggcttggtaaggtcaggccggtagtagttgtcgctgacctggtt 379
Query: 423 tttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagctt 482
|| |||||||||||||| |||||||||||||||||| | |||||||||||| ||| |
Sbjct: 378 cttgacagccttggccattttgcggaactccttgcgcgtgacagacttgtggtagaggct 319
Query: 483 cgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttcc 542
|| || |||||||||||| |||||||| |||||||||||||| |||| ||||| ||
Sbjct: 318 agcaggcttgttctgcttctctgtcttggttgtagagaggaccactgccgtttccttacc 259
Query: 543 agcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggagtg 602
| || ||||| | ||| || |||||||||||||| | |||||| | |||||| |||||
Sbjct: 258 actggcaggctgaaccgtcacggttttcttgtttgccaggccagaatgcttgtaagagtg 199
Query: 603 tacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgccaaa 662
|||||||| |||||||||||||||||| ||||||| |||||||||||||| ||||| ||
Sbjct: 198 gacattgtacaggttgttgggctccttgctgaactgaaccttggcattgccattgccgaa 139
Query: 663 ctgcttcaccaggaaggagttgttcttcctcacaatctgccagatcaga 711
|||||| |||||||| || ||||||||| | |||| || ||||| ||||
Sbjct: 138 ctgcttgaccaggaatgaattgttcttcttgacaagctcccagaccaga 90
>dbj|AK066599.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013069H24, full
insert sequence
Length = 2403
Score = 311 bits (157), Expect = 3e-082
Identities = 289/333 (86%)
Strand = Plus / Minus
Query: 415 acctggtttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtgg 474
|||||||| || |||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 393 acctggttcttgacagccttagccattttgcggaactccttgcgcatcacagacttgtgg 334
Query: 475 ctgagcttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgag 534
||||||||| || | |||||||||||||||||||| || ||||||||||| |||| |
Sbjct: 333 tagagcttcgctggggcattctgcttcttggtcttggttgtggagaggaccacggccgcg 274
Query: 535 tcctttccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttg 594
||||| | | | |||||||||||| || || |||||||| || |||||||||| ||||
Sbjct: 273 tccttcacgcctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttg 214
Query: 595 taggagtgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccg 654
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 taggagtggacattgtacaggttgttgggctccttggtgaactgcaccttggcattgcta 154
Query: 655 ttgccaaactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcc 714
|| || |||||||||||||||||| ||||||||||| | ||||||| |||||||| | |
Sbjct: 153 ttcccgaactgcttcaccaggaagcagttgttcttcttgacaatctcccagatcaaaggc 94
Query: 715 cctggaacggtcgccatttcccttcgccggaga 747
| ||||| ||||||||||| ||||||||||||
Sbjct: 93 tccggaaccgtcgccatttcgcttcgccggaga 61
Score = 139 bits (70), Expect = 3e-030
Identities = 100/110 (90%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||
Sbjct: 2145 ggctgcctgttcttcttcttggcaccagacttggaaacctggaggctgcggtacactgag 2086
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtc 410
|| ||||| |||| |||| ||||||||| ||||||||||| ||||||||
Sbjct: 2085 ctaagcctcgcaagagccggcttggtcaggtcaggcctgtagtagttgtc 2036
>gb|AU057623.1|AU057623 AU057623 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S21625_2Z, mRNA sequence
Length = 510
Score = 305 bits (154), Expect = 2e-080
Identities = 280/322 (86%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||
Sbjct: 322 ggctgcctgttcttcttcttggcaccagacttggaaacctggaggctgcggtacactgag 263
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|| ||||| |||| |||| ||||||||| ||||||||||| |||||||| | ||||||
Sbjct: 262 ctaagcctcgcaagagccggcttggtcaggtcaggcctgtagtagttgtcactcacctgg 203
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||||||| ||||| |||||||||||||||||||| |||||||||||| ||||
Sbjct: 202 ttcttgacagccttagccattttgcggaactccttgcgcatcacagacttgtggtagagc 143
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
||||| || | |||||||||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 142 ttcgctggggcattctgcttcttggtcttggttgtggagaggaccacggccgcgtccttc 83
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
| | | |||||||||||| || || |||||||| || |||||||||| ||||||||||
Sbjct: 82 acgcctgatggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggag 23
Query: 601 tgtacattgtagaggttgttgg 622
|| |||||||| ||||||||||
Sbjct: 22 tggacattgtacaggttgttgg 1
>gb|AU057622.1|AU057622 AU057622 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S21625_1A, mRNA sequence
Length = 424
Score = 301 bits (152), Expect = 3e-079
Identities = 323/378 (85%), Gaps = 2/378 (0%)
Strand = Plus / Minus
Query: 371 caagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctggtttttcacag 430
|||| |||| ||||||||| ||||||||||| |||||||| | |||||||| || ||||
Sbjct: 419 caagagccggcttggtcaggtcaggcctgtagtagttgtcactcacctggttcttgacag 360
Query: 431 ccttggccatcttgcggaactccttgcgcattacagacttgtggctgag-cttcgcgggt 489
|||| ||||| |||||||||||||||||||| |||||||||||| | || ||||| ||
Sbjct: 359 ccttagccattttgcggaactccttgcgcatcacagacttgtgg-taaganttcgctggg 301
Query: 490 gtgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttccagcagct 549
| |||||||||||||||||||| || ||||||||||| |||| |||||| | | | |
Sbjct: 300 gcattctgcttcttggtcttggttgtggagaggaccacggccgcgtccttcacgcctgat 241
Query: 550 ggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggagtgtacattg 609
||||||||||| || || |||||||| || |||||||||| |||||||||||| ||||||
Sbjct: 240 ggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtggacattg 181
Query: 610 tagaggttgttgggctccttggtgaactgcaccttggcattgccgttgccaaactgcttc 669
|| |||||||||||||||||||||||||||||||||||||||| || || |||||||||
Sbjct: 180 tacaggttgttgggctccttggtgaactgcaccttggcattgctattcccgaactgcttc 121
Query: 670 accaggaaggagttgttcttcctcacaatctgccagatcagatcccctggaacggtcgcc 729
||||||||| ||||||||||| | ||||||| |||||||| | | | ||||| ||||||
Sbjct: 120 accaggaagcagttgttcttcttgacaatctcccagatcaaaggctccggaaccgtcgcc 61
Query: 730 atttcccttcgccggaga 747
|| | | |||||||||||
Sbjct: 60 atnttcgttcgccggaga 43
>gb|CB682632.1|CB682632 OSJNEf10C22.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf10C22 5', mRNA sequence
Length = 536
Score = 301 bits (152), Expect = 3e-079
Identities = 254/288 (88%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 304 ggctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgag 245
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|| ||||| |||| |||| ||||||||||| |||||||| |||||||| | |||||||
Sbjct: 244 ctaagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctgg 185
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||||||| |||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 184 ttcttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtggtagagc 125
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || | |||||||||||||||||||| || |||||||||||||||| |||||||
Sbjct: 124 ttagctggggcattctgcttcttggtcttggtcgtggagaggaccacagccgcgtccttt 65
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagag 588
||| | | |||||||||||| || || |||||||| || |||||||||
Sbjct: 64 ccacctgatggctggatcgtcacggtcttcttgttcgccaagccagag 17
>gb|CF280323.1|CF280323 14ETL--06-P03.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--06-P03, mRNA sequence
Length = 437
Score = 299 bits (151), Expect = 1e-078
Identities = 235/263 (89%)
Strand = Plus / Minus
Query: 444 gcggaactccttgcgcattacagacttgtggctgagcttcgcgggtgtgttctgcttctt 503
|||||||||||||||||| |||||||||||| |||||| || || | |||||||||||
Sbjct: 437 gcggaactccttgcgcatcacagacttgtggtagagcttagctggggcattctgcttctt 378
Query: 504 ggtcttggtagtagagaggaccacagccgagtcctttccagcagctggctggatcgttac 563
||||||||| || |||||||||||||||| |||||||||| | | |||||||||||| ||
Sbjct: 377 ggtcttggtcgtggagaggaccacagccgcgtcctttccacctgatggctggatcgtcac 318
Query: 564 agttttcttgtttgctaagccagagtacttgtaggagtgtacattgtagaggttgttggg 623
|| |||||||| || |||||||||| |||||||||||| |||||||| |||||||||||
Sbjct: 317 ggtcttcttgttcgccaagccagagtgcttgtaggagtgaacattgtacaggttgttggg 258
Query: 624 ctccttggtgaactgcaccttggcattgccgttgccaaactgcttcaccaggaaggagtt 683
||||||||||||||||||||||||||||| ||| |||||||||||||| |||||| ||||
Sbjct: 257 ctccttggtgaactgcaccttggcattgctgtttccaaactgcttcacgaggaagcagtt 198
Query: 684 gttcttcctcacaatctgccaga 706
||||||| ||||||||| |||||
Sbjct: 197 gttcttcttcacaatctcccaga 175
>gb|C27632.1|C27632 C27632 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C52439_1A, mRNA sequence
Length = 445
Score = 293 bits (148), Expect = 8e-077
Identities = 245/278 (88%)
Strand = Plus / Minus
Query: 429 agccttggccatcttgcggaactccttgcgcattacagacttgtggctgagcttcgcggg 488
|||||| || ||||||||||||||||||||||| |||||||||||| | ||| || ||
Sbjct: 408 agccttagcnatcttgcggaactccttgcgcatcacagacttgtggtaaaccttagctgg 349
Query: 489 tgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttccagcagc 548
| |||||||||||||||||||| || ||||||||||||||| |||||||||| | |
Sbjct: 348 ggnattctgcttcttggtcttggtcgtgaagaggaccacagccgcgtcctttccacctga 289
Query: 549 tggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggagtgtacatt 608
|||||||||||| || || |||||||| || |||||||||| |||||||||||| |||||
Sbjct: 288 tggctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtgaacatt 229
Query: 609 gtagaggttgttgggctccttggtgaactgcaccttggcattgccgttgccaaactgctt 668
||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 228 gtacaggttgttgggctccttggtgaactgcaccttggcattgctgtttccaaactgctt 169
Query: 669 caccaggaaggagttgttcttcctcacaatctgccaga 706
||| |||||| ||||||||||| ||||||||| |||||
Sbjct: 168 cacgaggaagcagttgttcttcttcacaatctcccaga 131
>gb|C27746.1|C27746 C27746 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C52755_1A, mRNA sequence
Length = 402
Score = 293 bits (148), Expect = 8e-077
Identities = 288/333 (86%), Gaps = 2/333 (0%)
Strand = Plus / Minus
Query: 415 acctggtttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtgg 474
|||||||| || |||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct: 364 acctggttcttgacagccttagccattttgcggaactccttgcgcatcacagacttgtgg 305
Query: 475 ctgagcttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgag 534
|| |||||| || | |||||||||||||||||||| || ||||||||||| |||| |
Sbjct: 304 taga-cttcgctggggnattctgcttcttggtcttggttgtggagaggaccacggccgcg 246
Query: 535 tcctttccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttg 594
||||| | | | |||||||||||| || || |||||||| || |||||||||| ||||
Sbjct: 245 tccttcacgcctgatggctggatcgtnacggtcttcttgttcgccaagccagagtgcttg 186
Query: 595 taggagtgtacattgtagaggttgttgggctccttggtgaactgcaccttggcattgccg 654
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 taggagtggacattgtacaggttgttgggctccttggtgaactgcaccttggcattgcta 126
Query: 655 ttgccaaactgcttcaccaggaaggagttgttcttcctcacaatctgccagatcagatcc 714
|| || |||||||||||||||||| ||||||||||| | ||||||| |||||||| | |
Sbjct: 125 ttcccgaactgcttcaccaggaagcagttgttcttcttgacaatctcccagatcaaagct 66
Query: 715 cctggaacggtcgccatttcccttcgccggaga 747
|| ||||| |||||||| | |||||||||||||
Sbjct: 65 cc-ggaaccgtcgccatnttccttcgccggaga 34
>dbj|AK062099.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-A03, full
insert sequence
Length = 669
Score = 285 bits (144), Expect = 2e-074
Identities = 231/260 (88%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 268 ggctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgag 209
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|| ||||| |||| |||| ||||||||||| |||||||| |||||||| | |||||||
Sbjct: 208 ctaagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctgg 149
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||||||| |||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 148 ttcttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtggtagagc 89
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || | |||||||||||||||||||| || |||||||||||||||| |||||||
Sbjct: 88 ttagctggggcattctgcttcttggtcttggtcgtggagaggaccacagccgcgtccttt 29
Query: 541 ccagcagctggctggatcgt 560
||| | | ||||||||||||
Sbjct: 28 ccacctgatggctggatcgt 9
>gb|D23395.1|D23395 RICC2748A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2748_1A, mRNA sequence
Length = 373
Score = 274 bits (138), Expect = 7e-071
Identities = 265/307 (86%), Gaps = 1/307 (0%)
Strand = Plus / Minus
Query: 442 ttgcggaactccttgcgcattacagacttgtggctgag-cttcgcgggtgtgttctgctt 500
|||||||||||||||||||| |||||||||||| | || |||||| || | ||||||||
Sbjct: 356 ttgcggaactccttgcgcatcacagacttgtgggtaagacttcgctggggcattctgctt 297
Query: 501 cttggtcttggtagtagagaggaccacagccgagtcctttccagcagctggctggatcgt 560
|||||||||||| || ||||||||||| |||| |||||| | | | ||||||||||||
Sbjct: 296 cttggtcttggttgtggagaggaccacggccgcgtccttnacgcctgatggctggatcgt 237
Query: 561 tacagttttcttgtttgctaagccagagtacttgtaggagtgtacattgtagaggttgtt 620
|| || |||||||| || |||||||||| |||||||||||| |||||||| ||||||||
Sbjct: 236 nacggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtacaggttgtt 177
Query: 621 gggctccttggtgaactgcaccttggcattgccgttgccaaactgcttcaccaggaagga 680
|||||||||||||||||||||||||||||||| || || |||||||||||||||||| |
Sbjct: 176 gggctccttggtgaactgcaccttggcattgctattcccgaactgcttcaccaggaagca 117
Query: 681 gttgttcttcctcacaatctgccagatcagatcccctggaacggtcgccatttcccttcg 740
|||||||||| | ||||||| |||||||| | | | ||||| |||||||| | ||||||
Sbjct: 116 gttgttcttcttgacaatctcccagatcaaaggctccggaaccgtcgccatnttccttcg 57
Query: 741 ccggaga 747
|||||||
Sbjct: 56 ccggaga 50
>gb|AU077731.1|AU077731 AU077731 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61039_2Z, mRNA sequence
Length = 472
Score = 264 bits (133), Expect = 7e-068
Identities = 250/289 (86%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||
Sbjct: 289 ggctgcctgttcttcttcttggcaccagacttggaaacctggaggctgcggtacactgag 230
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|| ||||| |||| |||| ||||||||| ||||||||||| |||||||| | ||||||
Sbjct: 229 ctaagcctcgcaagagccggcttggtcaggtcaggcctgtagtagttgtcactcacctgg 170
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||||||| ||||| |||||||||||||||||||| |||||||||||| ||||
Sbjct: 169 ttcttgacagccttagccattttgcggaactccttgcgcatcacagacttgtggtagagc 110
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
||||| || | |||||||||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 109 ttcgctggggcattctgcttcttggtcttggttgtggagaggaccacggccgcgtccttc 50
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagt 589
| | | |||||||||||| || || |||||||| || ||||||||||
Sbjct: 49 acgcctgatggctggatcgtcacggtcttcttgttcgccaagccagagt 1
>gb|AU063118.1|AU063118 AU063118 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C53064_3A, mRNA sequence
Length = 465
Score = 260 bits (131), Expect = 1e-066
Identities = 234/267 (87%), Gaps = 2/267 (0%)
Strand = Plus / Minus
Query: 441 cttgcggaactccttgcgcatt-acagacttgtggctgagcttcgcgggtgtgttctgct 499
|||||| ||||||||||||| | |||||||||||| |||||| | || | |||||||
Sbjct: 362 cttgcgnaactccttgcgcaatcacagacttgtggtagagcttanctgg-gcattctgct 304
Query: 500 tcttggtcttggtagtagagaggaccacagccgagtcctttccagcagctggctggatcg 559
||||||||||||| || |||||||||||||||| | ||||||| | | |||||||||||
Sbjct: 303 tcttggtcttggtcgtggagaggaccacagccgcgnnctttccacctgatggctggatcg 244
Query: 560 ttacagttttcttgtttgctaagccagagtacttgtaggagtgtacattgtagaggttgt 619
| || || |||||||| || |||||||||| |||||||||||| |||||||| |||||||
Sbjct: 243 tcacggtcttcttgttcgccaagccagagtgcttgtaggagtgaacattgtacaggttgt 184
Query: 620 tgggctccttggtgaactgcaccttggcattgccgttgccaaactgcttcaccaggaagg 679
||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||
Sbjct: 183 tgggctccttggtgaactgcaccttggcattgctgtttccaaactgcttcacgaggaagc 124
Query: 680 agttgttcttcctcacaatctgccaga 706
||||||||||| ||||||||| |||||
Sbjct: 123 agttgttcttcttcacaatctcccaga 97
>gb|C27786.1|C27786 C27786 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C52857_1A, mRNA sequence
Length = 346
Score = 248 bits (125), Expect = 4e-063
Identities = 262/306 (85%), Gaps = 2/306 (0%)
Strand = Plus / Minus
Query: 442 ttgcggaactccttgcgcattacagacttgtggctgagcttcgcgggtgtgttctgcttc 501
|||||||||||||||||||| ||| |||||||| | || |||| || | |||||||||
Sbjct: 343 ttgcggaactccttgcgcatnacanacttgtgg-taagactcgctgg-gcattctgcttc 286
Query: 502 ttggtcttggtagtagagaggaccacagccgagtcctttccagcagctggctggatcgtt 561
||||||||||| || ||||||||||| |||| |||||| | | | ||||||||||||
Sbjct: 285 ttggtcttggttgtggagaggaccacggccgcgtccttcacgcctgatggctggatcgtc 226
Query: 562 acagttttcttgtttgctaagccagagtacttgtaggagtgtacattgtagaggttgttg 621
|| || |||||||| || |||||||||| |||||||||||| |||||||| |||||||||
Sbjct: 225 acggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtacaggttgttg 166
Query: 622 ggctccttggtgaactgcaccttggcattgccgttgccaaactgcttcaccaggaaggag 681
||||||||||||||||||||||||||||||| || || |||||||||||||||||| ||
Sbjct: 165 ggctccttggtgaactgcaccttggcattgctattcccgaactgcttcaccaggaagcag 106
Query: 682 ttgttcttcctcacaatctgccagatcagatcccctggaacggtcgccatttcccttcgc 741
||||||||| | ||||||| |||||| | | | | ||||| |||||||||| |||||||
Sbjct: 105 ttgttcttcttgacaatctcccagatnaaaggctccggaaccgtcgccattttccttcgc 46
Query: 742 cggaga 747
||||||
Sbjct: 45 cggaga 40
>gb|CF300692.1|CF300692 7LEAF--05-E08.b1 Rice leaf plasmid cDNA library II (7LEAF) Oryza
sativa (japonica cultivar-group) cDNA clone
7LEAF--05-E08, mRNA sequence
Length = 467
Score = 244 bits (123), Expect = 6e-062
Identities = 210/239 (87%)
Strand = Plus / Plus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||
Sbjct: 185 ggctgcctgttcttcttcttggcaccagacttggaaacctggaggctgcggtacactgag 244
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|| ||||| |||| |||| ||||||||| ||||||||||| |||||||| | ||||||
Sbjct: 245 ctaagcctcgcaagagccggcttggtcaggtcaggcctgtagtagttgtcactcacctgg 304
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||||||| ||||| |||||||||||||||||||| |||||||||||| |||
Sbjct: 305 ttcttgacagccttagccattttgcggaactccttgcgcatcacagacttgtggtaaagc 364
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt 539
||||| || | |||||||||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 365 ttcgctggggcattctgcttcttggtcttggttgtggagaggaccacggccgcgtcctt 423
>gb|D23397.1|D23397 RICC2751A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2751_1A, mRNA sequence
Length = 523
Score = 240 bits (121), Expect = 1e-060
Identities = 308/369 (83%), Gaps = 3/369 (0%)
Strand = Plus / Minus
Query: 381 cttggtcagatcaggcctgtaatagttgtcgccaacctggttt-ttcacagccttggcca 439
||||||||| ||||||||||| |||||||| | |||||| | || ||| |||| ||||
Sbjct: 417 cttggtcaggtcaggcctgtagtagttgtcactcacctgggntcttgacanccttagcca 358
Query: 440 tcttgcggaactccttgcgcattacagacttgtggctgagcttcgcgggtgtgttctgct 499
| |||||||||||||||||||| |||||||||||| || |||| | || |||| ||
Sbjct: 357 ttttgcggaactccttgcgcatcacagacttgtggtaga-cttcnctgggacattctnct 299
Query: 500 tcttggtcttggtagtagagaggaccacagccgagtcctttccagca-gctggctggatc 558
||||||||||||| || ||||||||||| ||| | |||| || | || |||||||
Sbjct: 298 tcttggtcttggttgtggagaggaccacggccncgnccttcaacgcctgatgnctggatc 239
Query: 559 gttacagttttcttgtttgctaagccagagtacttgtaggagtgtacattgtagaggttg 618
|| || || |||||||| || |||||||||| |||||||||||| |||||||| ||||||
Sbjct: 238 gtcacggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtacaggttg 179
Query: 619 ttgggctccttggtgaactgcaccttggcattgccgttgccaaactgcttcaccaggaag 678
|||||||||||||||||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 178 ttgggctccttggtgaactgcaccttggcattgctattcccgaactgcttcaccaggaag 119
Query: 679 gagttgttcttcctcacaatctgccagatcagatcccctggaacggtcgccatttccctt 738
||||||||||| | ||||||| |||||||| | | | ||||| |||||||| | ||||
Sbjct: 118 cagttgttcttcttgacaatctcccagatcaaaggctccggaaccgtcgccatnttcctt 59
Query: 739 cgccggaga 747
|||||||||
Sbjct: 58 cgccggaga 50
>gb|D22671.1|D22671 RICC0835A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C0835_1A, mRNA sequence
Length = 337
Score = 238 bits (120), Expect = 4e-060
Identities = 261/305 (85%), Gaps = 3/305 (0%)
Strand = Plus / Minus
Query: 444 gcggaactccttgcgcattacagacttgtggctgag-cttcgcgggtgtgttctgcttct 502
|||||||||||||||||| |||||||||||| | || |||||| || | ||||||||||
Sbjct: 337 gcggaactccttgcgcatcacagacttgtgg-taagacttcgctggggcattctgcttct 279
Query: 503 tggtcttggtagtagagaggaccacagccgagtcctttccagcagctggctggatcgtta 562
|||||||||| || |||||||||| |||| |||||| | | | |||||||||||| |
Sbjct: 278 tggtcttggttgtgnagaggaccacggccgcgtccttcacgcctgatggctggatcgtca 219
Query: 563 cagttttcttgtttgctaagccagagtacttgtaggagtgtacattgtagaggttgttgg 622
| || |||||||| || |||||||||| |||||||||||| |||||||| ||||||||||
Sbjct: 218 cggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtacaggttgttgg 159
Query: 623 gctccttggtgaactgcaccttggcattgccgttgccaaactgcttcaccaggaaggagt 682
|||||||||||||||||||||||||||||| || || |||||||||||||||||| ||
Sbjct: 158 gctccttggtgaactgcaccttggcattgctattcccgaactgcttcaccaggaagcngt 99
Query: 683 tgttcttcctcacaatctgccagatcagatcccctggaacggtcgccatttcccttcgcc 742
|||||||| | ||||||| |||||||| | | || ||||| |||||||| | | ||||||
Sbjct: 98 tgttcttcttgacaatctcccagatcaaagctcc-ggaaccgtcgccatattcnttcgcc 40
Query: 743 ggaga 747
|||||
Sbjct: 39 ggaga 35
>gb|AU031211.1|AU031211 AU031211 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E61151_1A, mRNA sequence
Length = 408
Score = 238 bits (120), Expect = 4e-060
Identities = 189/212 (89%)
Strand = Plus / Minus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 217 ggctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgag 158
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|| ||||| |||| |||| ||||||||||| |||||||| |||||||| | |||||||
Sbjct: 157 ctaagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctgg 98
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
|| || |||||||| |||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 97 ttcttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtggtagagc 38
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggt 512
|| || || | ||||||||||||||||||||
Sbjct: 37 ttagctggggcattctgcttcttggtcttggt 6
>gb|CB000090.1|CB000090 S345W_C05 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 331
Score = 232 bits (117), Expect = 2e-058
Identities = 265/313 (84%), Gaps = 1/313 (0%)
Strand = Plus / Minus
Query: 436 gccatcttgcggaactccttgcgcattacagacttgtggct-gagcttcgcgggtgtgtt 494
||||| |||||||||||||||||||| |||||||| || | ||||||||| || | ||
Sbjct: 328 gccattttgcggaactccttgcgcatcacagacttctgagtagagcttcgctggggcatt 269
Query: 495 ctgcttcttggtcttggtagtagagaggaccacagccgagtcctttccagcagctggctg 554
|||||||||||||||||| || ||||||||||| | | |||||| | | | | ||||
Sbjct: 268 ctgcttcttggtcttggttgtggagaggaccacgcctgcgtccttcacgcctgatcgctg 209
Query: 555 gatcgttacagttttcttgtttgctaagccagagtacttgtaggagtgtacattgtagag 614
|||||| || || |||||||| || |||||||||| |||||||||||| |||||||| ||
Sbjct: 208 gatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtacag 149
Query: 615 gttgttgggctccttggtgaactgcaccttggcattgccgttgccaaactgcttcaccag 674
|||||||||||||||||||||||||||||||||||||| || || ||||||||||||||
Sbjct: 148 gttgttgggctccttggtgaactgcaccttggcattgctattcccgaactgcttcaccag 89
Query: 675 gaaggagttgttcttcctcacaatctgccagatcagatcccctggaacggtcgccatttc 734
|||| ||||||||||| | ||||||| |||||||| | | | | || |||||||||||
Sbjct: 88 gaagcagttgttcttcttgacaatctcccagatcaaaggctccaggaccgtcgccatttc 29
Query: 735 ccttcgccggaga 747
||||||||||||
Sbjct: 28 gcttcgccggaga 16
>gb|D23418.1|D23418 RICC2782A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C2782_1A, mRNA sequence
Length = 398
Score = 226 bits (114), Expect = 1e-056
Identities = 206/237 (86%)
Strand = Plus / Minus
Query: 303 ctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagagct 362
||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||
Sbjct: 243 ctgcctgttcttcttcttggcaccagacttggaaacctggaggctgcggtacactgagct 184
Query: 363 cagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctggtt 422
||||| |||| |||| ||||||||| ||||||||||| |||||||| | ||||||||
Sbjct: 183 aagcctcgcaagagccggcttggtcaggtcaggcctgtagtagttgtcactcacctggtt 124
Query: 423 tttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagctt 482
|| |||||||| ||||| |||||||||||||||||||| |||||||||||| |||
Sbjct: 123 cttgacagccttagccattttgcggaactccttgcgcatcacagacttgtggtangactt 64
Query: 483 cgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtcctt 539
||| || | |||||||||||||||||||| || ||||||||||| |||| ||||||
Sbjct: 63 cgctggggcattctgcttcttggtcttggttgtggagaggaccacggccgcgtcctt 7
>gb|AU065482.2|AU065482 AU065482 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C20036_2A, mRNA sequence
Length = 340
Score = 224 bits (113), Expect = 6e-056
Identities = 219/255 (85%)
Strand = Plus / Minus
Query: 493 ttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttccagcagctggc 552
|||||||| ||||||||||| || ||||||||||| |||| |||||| | | | ||||
Sbjct: 304 ttctgcttnttggtcttggttgtggagaggaccacggccgcgtccttcacgcctgatggc 245
Query: 553 tggatcgttacagttttcttgtttgctaagccagagtacttgtaggagtgtacattgtag 612
|||||||| || || |||||||| || |||||||||| |||||||||||| ||||||||
Sbjct: 244 tggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtac 185
Query: 613 aggttgttgggctccttggtgaactgcaccttggcattgccgttgccaaactgcttcacc 672
|||||||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 184 aggttgttgggctccttggtgaactgcaccttggcattgctattcccgaactgcttcacc 125
Query: 673 aggaaggagttgttcttcctcacaatctgccagatcagatcccctggaacggtcgccatt 732
|||||| ||||||||||| | ||||||| |||||||| | | | ||||| ||||||||
Sbjct: 124 aggaagcagttgttcttcttgacaatctcccagatcaaaggctccggaaccgtcgccata 65
Query: 733 tcccttcgccggaga 747
| | |||||||||||
Sbjct: 64 ttcnttcgccggaga 50
>gb|D15263.1|D15263 RICC0376A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C0376A, mRNA sequence
Length = 323
Score = 218 bits (110), Expect = 4e-054
Identities = 190/217 (87%)
Strand = Plus / Minus
Query: 493 ttctgcttcttggtcttggtagtagagaggaccacagccgagtcctttccagcagctggc 552
|||||||||||||||||||| || ||||| ||||| |||| |||||| | | | ||||
Sbjct: 304 ttctgcttcttggtcttggttgtggagagnaccacggccgcgtccttaacgcctgatggc 245
Query: 553 tggatcgttacagttttcttgtttgctaagccagagtacttgtaggagtgtacattgtag 612
|||||||| || || |||||||| || |||||||||| |||||||||||| ||||||||
Sbjct: 244 tggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaggagtggacattgtac 185
Query: 613 aggttgttgggctccttggtgaactgcaccttggcattgccgttgccaaactgcttcacc 672
|||||||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 184 aggttgttgggctccttggtgaactgcaccttggcattgctattcccgaactgcttcacc 125
Query: 673 aggaaggagttgttcttcctcacaatctgccagatca 709
|||||| ||||||||||| | ||||||| ||||||||
Sbjct: 124 aggaagcagttgttcttcttgacaatctcccagatca 88
>gb|CB682633.1|CB682633 OSJNEf10C22.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf10C22 3', mRNA sequence
Length = 692
Score = 202 bits (102), Expect = 2e-049
Identities = 252/302 (83%)
Strand = Plus / Plus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
|||||||||||||||||||| |||||| ||||||||||||||||| |||||||||| ||
Sbjct: 233 ggctgcctgttcttcttcttcacaccaaacttggcaacctggagggtgcggtacactgaa 292
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|| ||||| |||| ||| ||||||| ||| |||||||| || ||||| | |||||||
Sbjct: 293 ctaagccttgcaagaaccggtttggtcaaatctggcctgtagtaattgtcactaacctgg 352
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtggctgagc 480
| || |||||||| ||||||||||||||||||||||||| ||| ||||| || |||
Sbjct: 353 gtcttgacagccttaaccatcttgcggaactccttgcgcatcacaaacttgggggaaagc 412
Query: 481 ttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgagtccttt 540
|| || || | ||||||||||||||||||| | |||| ||||||||||| |||||||
Sbjct: 413 ttagctggggcattctgcttcttggtcttgggcggggagaagaccacagccgcgtccttt 472
Query: 541 ccagcagctggctggatcgttacagttttcttgtttgctaagccagagtacttgtaggag 600
||| | | |||||||||||| || | |||||||| || |||||||||| ||||||||||
Sbjct: 473 ccacctgatggctggatcgtcacgggcttcttgttcgccaagccagagtgcttgtaggag 532
Query: 601 tg 602
||
Sbjct: 533 tg 534
>gb|CF277732.1|CF277732 14ETL--03-G03.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--03-G03, mRNA sequence
Length = 432
Score = 198 bits (100), Expect = 3e-048
Identities = 145/160 (90%)
Strand = Plus / Plus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 273 ggctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgag 332
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctgg 420
|| ||||| |||| |||| ||||||||||| |||||||| |||||||| | |||||||
Sbjct: 333 ctaagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctgg 392
Query: 421 tttttcacagccttggccatcttgcggaactccttgcgca 460
|| || |||||||| |||||||||||||||||||||||||
Sbjct: 393 ttcttgacagccttagccatcttgcggaactccttgcgca 432
>gb|AU058323.1|AU058323 AU058323 Oryza sativa Nipponbare immature leaf including apical
meristem (under long day condition) Oryza sativa
(japonica cultivar-group) cDNA clone E50466_1A, mRNA
sequence
Length = 341
Score = 188 bits (95), Expect = 3e-045
Identities = 219/257 (85%), Gaps = 3/257 (1%)
Strand = Plus / Minus
Query: 494 tctgcttcttggtcttggtagtaga-gaggaccacagccgagtcctttccagca-gctgg 551
||||||||||||||||||| || || ||||||||| |||| |||||| || | |||
Sbjct: 299 tctgcttcttggtcttggttgtggaagaggaccacggccgcgtccttcaacgcctgatgg 240
Query: 552 ctggatcgttacagttttcttgtttgctaagccagagtacttgta-ggagtgtacattgt 610
||||||||| || || |||||||| || |||||||||| |||||| ||| || |||||||
Sbjct: 239 ctggatcgtcacggtcttcttgttcgccaagccagagtgcttgtaaggantggacattgt 180
Query: 611 agaggttgttgggctccttggtgaactgcaccttggcattgccgttgccaaactgcttca 670
| |||||||||||||||||||||||||||||||||||||||| || || ||||||||||
Sbjct: 179 acaggttgttgggctccttggtgaactgcaccttggcattgctattcccgaactgcttca 120
Query: 671 ccaggaaggagttgttcttcctcacaatctgccagatcagatcccctggaacggtcgcca 730
|||||||| ||||||||||| | ||||||| |||||||| | | | ||||| |||||||
Sbjct: 119 ccaggaagcagttgttcttcttgacaatctcccagatcaaaggctccggaaccgtcgcca 60
Query: 731 tttcccttcgccggaga 747
||| | |||||||||||
Sbjct: 59 ttttcnttcgccggaga 43
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0474F11
Length = 139544
Score = 174 bits (88), Expect = 5e-041
Identities = 115/124 (92%)
Strand = Plus / Plus
Query: 583 ccagagtacttgtaggagtgtacattgtagaggttgttgggctccttggtgaactgcacc 642
||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 88018 ccagagtgcttgtaggagtgaacattgtacaggttgttgggctccttggtgaactgcacc 88077
Query: 643 ttggcattgccgttgccaaactgcttcaccaggaaggagttgttcttcctcacaatctgc 702
|||||||||| ||| |||||||||||||| |||||| ||||||||||| ||||||||| |
Sbjct: 88078 ttggcattgctgtttccaaactgcttcacgaggaagcagttgttcttcttcacaatctcc 88137
Query: 703 caga 706
||||
Sbjct: 88138 caga 88141
Score = 163 bits (82), Expect = 2e-037
Identities = 148/170 (87%)
Strand = Plus / Plus
Query: 415 acctggtttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtgg 474
|||||||| || |||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 87749 acctggttcttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtgg 87808
Query: 475 ctgagcttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgag 534
|||||| || || | |||||||||||||||||||| || |||||||||||||||| |
Sbjct: 87809 tagagcttagctggggcattctgcttcttggtcttggtcgtggagaggaccacagccgcg 87868
Query: 535 tcctttccagcagctggctggatcgttacagttttcttgtttgctaagcc 584
||||||||| | | |||||||||||| || || |||||||| || |||||
Sbjct: 87869 tcctttccacctgatggctggatcgtcacggtcttcttgttcgccaagcc 87918
Score = 141 bits (71), Expect = 7e-031
Identities = 107/119 (89%)
Strand = Plus / Plus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 87113 ggctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgag 87172
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctg 419
|| ||||| |||| |||| ||||||||||| |||||||| |||||||| | ||||||
Sbjct: 87173 ctaagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctg 87231
>gb|AACV01005659.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005659, whole
genome shotgun sequence
Length = 15634
Score = 174 bits (88), Expect = 5e-041
Identities = 115/124 (92%)
Strand = Plus / Plus
Query: 583 ccagagtacttgtaggagtgtacattgtagaggttgttgggctccttggtgaactgcacc 642
||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 6345 ccagagtgcttgtaggagtgaacattgtacaggttgttgggctccttggtgaactgcacc 6404
Query: 643 ttggcattgccgttgccaaactgcttcaccaggaaggagttgttcttcctcacaatctgc 702
|||||||||| ||| |||||||||||||| |||||| ||||||||||| ||||||||| |
Sbjct: 6405 ttggcattgctgtttccaaactgcttcacgaggaagcagttgttcttcttcacaatctcc 6464
Query: 703 caga 706
||||
Sbjct: 6465 caga 6468
Score = 163 bits (82), Expect = 2e-037
Identities = 148/170 (87%)
Strand = Plus / Plus
Query: 415 acctggtttttcacagccttggccatcttgcggaactccttgcgcattacagacttgtgg 474
|||||||| || |||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 6076 acctggttcttgacagccttagccatcttgcggaactccttgcgcatcacagacttgtgg 6135
Query: 475 ctgagcttcgcgggtgtgttctgcttcttggtcttggtagtagagaggaccacagccgag 534
|||||| || || | |||||||||||||||||||| || |||||||||||||||| |
Sbjct: 6136 tagagcttagctggggcattctgcttcttggtcttggtcgtggagaggaccacagccgcg 6195
Query: 535 tcctttccagcagctggctggatcgttacagttttcttgtttgctaagcc 584
||||||||| | | |||||||||||| || || |||||||| || |||||
Sbjct: 6196 tcctttccacctgatggctggatcgtcacggtcttcttgttcgccaagcc 6245
Score = 141 bits (71), Expect = 7e-031
Identities = 107/119 (89%)
Strand = Plus / Plus
Query: 301 ggctgcctgttcttcttcttgacaccagacttggcaacctggaggctgcggtacacagag 360
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 5440 ggctgcctgttcttcttcttcacaccagacttggcaacctggaggctgcggtacactgag 5499
Query: 361 ctcagcctaccaagggccgacttggtcagatcaggcctgtaatagttgtcgccaacctg 419
|| ||||| |||| |||| ||||||||||| |||||||| |||||||| | ||||||
Sbjct: 5500 ctaagccttgcaagagccggtttggtcagatctggcctgtagtagttgtcactaacctg 5558
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,125,464
Number of Sequences: 438736
Number of extensions: 1125464
Number of successful extensions: 8411
Number of sequences better than 0.5: 86
Number of HSP's better than 0.5 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8047
Number of HSP's gapped (non-prelim): 300
length of query: 819
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 798
effective length of database: 2,791,206,460
effective search space: 2227382755080
effective search space used: 2227382755080
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)