BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.49
(1833 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF290947.1|CF290947 14ROOT--01-D01.b1 Rice root plasmid ... 460 e-126
gb|CB670862.1|CB670862 OSJNEe04C16.f OSJNEe Oryza sativa (j... 444 e-122
dbj|AP002540.2| Oryza sativa (japonica cultivar-group) geno... 444 e-122
gb|AACV01000195.1| Oryza sativa (japonica cultivar-group) c... 444 e-122
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 444 e-122
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 444 e-122
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 444 e-122
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 444 e-122
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 444 e-122
ref|NM_184374.1| Oryza sativa (japonica cultivar-group), mRNA 440 e-120
gb|AU097673.1|AU097673 AU097673 Rice panicle shorter than 3... 436 e-119
gb|CB670863.1|CB670863 OSJNEe04C16.r OSJNEe Oryza sativa (j... 436 e-119
gb|AC098832.3| Oryza sativa (japonica cultivar-group) chrom... 436 e-119
gb|AC104284.2| Oryza sativa (japonica cultivar-group) chrom... 436 e-119
gb|AACV01012743.1| Oryza sativa (japonica cultivar-group) c... 436 e-119
ref|NT_107222.1| Oryza sativa (japonica cultivar-group) 436 e-119
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 436 e-119
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 436 e-119
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 436 e-119
gb|CO436072.1|CO436072 OsMR994 5MT resistant rice mutant cD... 432 e-118
ref|XM_475912.1| Oryza sativa (japonica cultivar-group), p... 432 e-118
gb|AU032007.1|AU032007 AU032007 Rice root Oryza sativa (jap... 424 e-116
gb|CF307934.1|CF307934 ABF--01-I21.b1 ABF3-overexpressing t... 420 e-114
gb|CA755827.1|CA755827 BR030029000_PLATE_B12_90_096.ab1 OA ... 418 e-114
gb|CA998897.1|CA998897 S345N_D05 Rice cold stress germinati... 418 e-114
gb|CB662156.1|CB662156 OSJNEd05O18.f OSJNEd Oryza sativa (j... 408 e-111
gb|CB662157.1|CB662157 OSJNEd05O18.r OSJNEd Oryza sativa (j... 408 e-111
gb|CF278594.1|CF278594 14ETL--04-I24.b1 Rice etiolated leaf... 408 e-111
gb|CF292148.1|CF292148 14ROOT--02-N19.b1 Rice root plasmid ... 408 e-111
gb|CF292227.1|CF292227 14ROOT--02-P16.b1 Rice root plasmid ... 408 e-111
gb|CF333473.1|CF333473 JMT--02-G04.b1 AtJMT-overexpressing ... 408 e-111
gb|CV731987.1|CV731987 FLO--06-E06.g1 Rice flower lambda ph... 408 e-111
dbj|AP002522.1| Oryza sativa (japonica cultivar-group) geno... 408 e-111
dbj|AP003045.2| Oryza sativa (japonica cultivar-group) geno... 408 e-111
gb|AACV01000215.1| Oryza sativa (japonica cultivar-group) c... 408 e-111
ref|NM_184407.1| Oryza sativa (japonica cultivar-group), mRNA 408 e-111
gb|CA998848.1|CA998848 S345M_G12 Rice cold stress germinati... 404 e-110
gb|BP184585.1|BP184585 BP184585 pNS rice panicle cDNA, flow... 404 e-110
gb|BP184926.1|BP184926 BP184926 pNS rice callus cDNA Oryza ... 404 e-110
gb|AU031294.1|AU031294 AU031294 Rice cDNA from immature lea... 400 e-108
gb|AU070936.1|AU070936 AU070936 Rice cDNA from young root O... 400 e-108
gb|CF291163.1|CF291163 14ROOT--01-H18.b1 Rice root plasmid ... 400 e-108
gb|CF291164.1|CF291164 14ROOT--01-H18.g1 Rice root plasmid ... 400 e-108
gb|CF292040.1|CF292040 14ROOT--02-L10.b1 Rice root plasmid ... 400 e-108
ref|NM_184409.1| Oryza sativa (japonica cultivar-group), mRNA 400 e-108
gb|CF313653.1|CF313653 HD--01-N17.g1 OsHDAC1-overexpressing... 398 e-108
gb|AU031069.1|AU031069 AU031069 Rice cDNA from immature lea... 396 e-107
gb|AU092503.1|AU092503 AU092503 Rice callus Oryza sativa (j... 396 e-107
gb|CF296221.1|CF296221 30DGS--06-H23.b1 Rice leaf plasmid c... 396 e-107
gb|AACV01000214.1| Oryza sativa (japonica cultivar-group) c... 396 e-107
gb|AU029435.1|AU029435 AU029435 Rice panicle shorter than 3... 394 e-107
gb|AU068669.1|AU068669 AU068669 Rice callus Oryza sativa (j... 394 e-107
gb|AU068670.1|AU068670 AU068670 Rice callus Oryza sativa (j... 394 e-107
gb|AU076129.1|AU076129 AU076129 Rice panicle shorter than 3... 394 e-107
gb|AU097671.1|AU097671 AU097671 Rice panicle shorter than 3... 394 e-107
gb|AU097672.1|AU097672 AU097672 Rice panicle shorter than 3... 394 e-107
gb|CF290925.1|CF290925 14ROOT--01-C11.g1 Rice root plasmid ... 394 e-107
gb|CF313968.1|CF313968 HD--02-E24.g1 OsHDAC1-overexpressing... 394 e-107
gb|CF318598.1|CF318598 HD--08-M15.g1 OsHDAC1-overexpressing... 394 e-107
gb|CF338483.1|CF338483 RCL1--01-N06.g1 Regenerated callus l... 394 e-107
gb|CF338741.1|CF338741 RCL1--02-K06.g1 Regenerated callus l... 394 e-107
gb|CF339512.1|CF339512 RCL1--05-B11.g1 Regenerated callus l... 394 e-107
gb|CF339642.1|CF339642 RCL1--05-I03.g1 Regenerated callus l... 394 e-107
gb|CF339736.1|CF339736 RCL1--05-M18.g1 Regenerated callus l... 394 e-107
gb|CF339787.1|CF339787 RCL1--05-O24.g1 Regenerated callus l... 394 e-107
gb|CF340036.1|CF340036 RCL1--06-M03.g1 Regenerated callus l... 394 e-107
gb|CF340228.1|CF340228 RCL1--07-F18.g1 Regenerated callus l... 394 e-107
gb|CF340525.1|CF340525 RCL1--08-E24.g1 Regenerated callus l... 394 e-107
gb|CF340729.1|CF340729 RCL1--08-P04.g1 Regenerated callus l... 394 e-107
gb|CV730234.1|CV730234 FLO--03-K21.g1 Rice flower lambda ph... 394 e-107
gb|CV731425.1|CV731425 FLO--05-H09.b1 Rice flower lambda ph... 394 e-107
dbj|AP004620.3| Oryza sativa (japonica cultivar-group) geno... 394 e-107
gb|AACV01000194.1| Oryza sativa (japonica cultivar-group) c... 394 e-107
gb|AACV01018772.1| Oryza sativa (japonica cultivar-group) c... 394 e-107
ref|XM_483094.1| Oryza sativa (japonica cultivar-group), mRNA 394 e-107
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 394 e-107
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 394 e-107
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 394 e-107
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 394 e-107
gb|AU031202.1|AU031202 AU031202 Rice cDNA from immature lea... 392 e-106
gb|CB661775.1|CB661775 OSJNEd05B14.f OSJNEd Oryza sativa (j... 392 e-106
gb|CF334827.1|CF334827 JMT--04-E05.b1 AtJMT-overexpressing ... 392 e-106
gb|CO435616.1|CO435616 OsMR682 5MT resistant rice mutant cD... 392 e-106
gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbar... 392 e-106
gb|AACV01006345.1| Oryza sativa (japonica cultivar-group) c... 392 e-106
ref|NM_184403.1| Oryza sativa (japonica cultivar-group), mRNA 392 e-106
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 392 e-106
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 392 e-106
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 392 e-106
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 392 e-106
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 392 e-106
gb|AU058394.1|AU058394 AU058394 Oryza sativa Nipponbare imm... 391 e-105
gb|AU082347.1|AU082347 AU082347 Rice callus Oryza sativa (j... 391 e-105
gb|AU082356.1|AU082356 AU082356 Rice callus Oryza sativa (j... 391 e-105
gb|AU082408.1|AU082408 AU082408 Rice panicle shorter than 3... 391 e-105
gb|AU097668.1|AU097668 AU097668 Rice callus Oryza sativa (j... 391 e-105
gb|AU097679.1|AU097679 AU097679 Rice root Oryza sativa (jap... 391 e-105
gb|CF292090.1|CF292090 14ROOT--02-M12.g1 Rice root plasmid ... 391 e-105
gb|CV728820.1|CV728820 FLO--01-F13.b1 Rice flower lambda ph... 391 e-105
gb|CV729266.1|CV729266 FLO--02-A05.b1 Rice flower lambda ph... 391 e-105
gb|CV733415.1|CV733415 FLO--08-F04.g1 Rice flower lambda ph... 391 e-105
gb|AACV01000209.1| Oryza sativa (japonica cultivar-group) c... 391 e-105
ref|NM_184371.1| Oryza sativa (japonica cultivar-group), mRNA 391 e-105
ref|NM_184399.1| Oryza sativa (japonica cultivar-group), mRNA 391 e-105
gb|CA756225.1|CA756225 BR030038000_PLATE_A05_33_035.ab1 OA ... 389 e-105
gb|CF333577.1|CF333577 JMT--02-I13.b1 AtJMT-overexpressing ... 387 e-104
gb|CV730588.1|CV730588 FLO--04-D06.b1 Rice flower lambda ph... 387 e-104
gb|AU057602.2|AU057602 AU057602 Oryza sativa mature leaf Ni... 387 e-104
ref|NM_184405.1| Oryza sativa (japonica cultivar-group), mRNA 387 e-104
gb|AU097681.1|AU097681 AU097681 Rice root Oryza sativa (jap... 385 e-104
gb|CF290908.1|CF290908 14ROOT--01-B24.g1 Rice root plasmid ... 385 e-104
gb|CF291302.1|CF291302 14ROOT--01-K20.b1 Rice root plasmid ... 385 e-104
gb|CF297134.1|CF297134 30DGS--07-M18.b1 Rice leaf plasmid c... 385 e-104
gb|CF279531.1|CF279531 14ETL--05-N20.b1 Rice etiolated leaf... 383 e-103
gb|CF292189.1|CF292189 14ROOT--02-O19.b1 Rice root plasmid ... 383 e-103
gb|AU057603.1|AU057603 AU057603 Oryza sativa mature leaf Ni... 381 e-102
gb|CF280347.1|CF280347 14ETL--06-P18.b1 Rice etiolated leaf... 381 e-102
gb|CF338330.1|CF338330 RCL1--01-F18.g1 Regenerated callus l... 381 e-102
gb|CF340422.1|CF340422 RCL1--07-P17.g1 Regenerated callus l... 381 e-102
gb|C27274.1|C27274 C27274 Rice callus cDNA Oryza sativa (ja... 379 e-102
gb|AU076128.1|AU076128 AU076128 Rice panicle shorter than 3... 379 e-102
gb|CV732516.1|CV732516 FLO--07-A10.b1 Rice flower lambda ph... 379 e-102
gb|CV728225.1|CV728225 14Salt--06-N03.g1 Salt treated rice ... 375 e-101
gb|AU030153.2|AU030153 AU030153 Rice cDNA from immature lea... 371 e-100
gb|CF281520.1|CF281520 14ETL--08-J17.b1 Rice etiolated leaf... 369 4e-099
gb|AU097683.1|AU097683 AU097683 Rice cDNA from young root O... 367 1e-098
gb|C73984.2|C73984 C73984 Rice panicle shorter than 3cm Ory... 367 1e-098
gb|AU097675.1|AU097675 AU097675 Rice immature leaf includin... 365 6e-098
gb|AU029407.1|AU029407 AU029407 Rice panicle shorter than 3... 363 2e-097
gb|CV731643.1|CV731643 FLO--05-M07.g1 Rice flower lambda ph... 355 5e-095
gb|AU070851.1|AU070851 AU070851 Rice cDNA from young root O... 351 9e-094
gb|AU182734.1|AU182734 AU182734 Rice panicle shorter than 3... 351 9e-094
gb|AU097674.1|AU097674 AU097674 Rice immature leaf includin... 349 3e-093
gb|CF281757.1|CF281757 14ETL--08-P04.b1 Rice etiolated leaf... 349 3e-093
gb|CF290907.1|CF290907 14ROOT--01-B24.b1 Rice root plasmid ... 349 3e-093
gb|AU183294.1|AU183294 AU183294 Rice cDNA from immature lea... 345 5e-092
gb|CF291327.1|CF291327 14ROOT--01-L08.g1 Rice root plasmid ... 345 5e-092
gb|CF292089.1|CF292089 14ROOT--02-M12.b1 Rice root plasmid ... 345 5e-092
gb|CV729210.1|CV729210 FLO--01-O23.b1 Rice flower lambda ph... 345 5e-092
gb|CV724027.1|CV724027 root--05-J06.g1 Rice root lambda pha... 341 8e-091
gb|CV728821.1|CV728821 FLO--01-F13.g1 Rice flower lambda ph... 341 8e-091
gb|AU097680.2|AU097680 AU097680 Rice root Oryza sativa (jap... 341 8e-091
gb|AQ362504.2|AQ362504 nbxb0050G11f CUGI Rice BAC Library O... 337 1e-089
gb|AU097677.1|AU097677 AU097677 Rice cDNA from immature lea... 337 1e-089
gb|CV727429.1|CV727429 14Salt--05-J04.b1 Salt treated rice ... 337 1e-089
gb|CV733073.1|CV733073 FLO--07-N06.b1 Rice flower lambda ph... 337 1e-089
gb|AACV01001262.1| Oryza sativa (japonica cultivar-group) c... 337 1e-089
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 337 1e-089
dbj|AP003144.1| Oryza sativa (japonica cultivar-group) geno... 337 1e-089
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 337 1e-089
gb|CF281758.1|CF281758 14ETL--08-P04.g1 Rice etiolated leaf... 335 5e-089
gb|CF291429.1|CF291429 14ROOT--01-N15.b1 Rice root plasmid ... 335 5e-089
gb|CF333474.1|CF333474 JMT--02-G04.g1 AtJMT-overexpressing ... 335 5e-089
gb|CV725853.1|CV725853 14Salt--03-C23.b1 Salt treated rice ... 335 5e-089
gb|CV729191.1|CV729191 FLO--01-O12.b1 Rice flower lambda ph... 335 5e-089
gb|CF291303.1|CF291303 14ROOT--01-K20.g1 Rice root plasmid ... 333 2e-088
gb|CV725979.1|CV725979 14Salt--03-G01.b1 Salt treated rice ... 333 2e-088
gb|CF339471.1|CF339471 RCL1--04-P13.g1 Regenerated callus l... 331 8e-088
gb|CV728178.1|CV728178 14Salt--06-L23.b1 Salt treated rice ... 331 8e-088
gb|CV731986.1|CV731986 FLO--06-E06.b1 Rice flower lambda ph... 331 8e-088
gb|AU097676.1|AU097676 AU097676 Rice immature leaf includin... 329 3e-087
gb|CF338869.1|CF338869 RCL1--03-A13.g1 Regenerated callus l... 329 3e-087
gb|CF340382.1|CF340382 RCL1--07-N17.g1 Regenerated callus l... 329 3e-087
gb|CF340744.1|CF340744 RCL1--08-P20.g1 Regenerated callus l... 329 3e-087
gb|CV733163.1|CV733163 FLO--07-P07.b1 Rice flower lambda ph... 329 3e-087
gb|CV734119.1|CV734119 FLO--09-F11.b1 Rice flower lambda ph... 329 3e-087
gb|CF292149.1|CF292149 14ROOT--02-N19.g1 Rice root plasmid ... 327 1e-086
gb|AU091836.1|AU091836 AU091836 Rice callus Oryza sativa (j... 325 5e-086
gb|CF292220.1|CF292220 14ROOT--02-P12.g1 Rice root plasmid ... 325 5e-086
gb|CV725902.1|CV725902 14Salt--03-E01.b1 Salt treated rice ... 325 5e-086
gb|C74070.1|C74070 C74070 Rice panicle shorter than 3cm Ory... 323 2e-085
gb|CV727137.1|CV727137 14Salt--05-C06.g1 Salt treated rice ... 323 2e-085
gb|CV727985.1|CV727985 14Salt--06-G22.b1 Salt treated rice ... 323 2e-085
gb|CF293430.1|CF293430 30DGS--02-J22.b1 Rice leaf plasmid c... 321 8e-085
gb|CV725854.1|CV725854 14Salt--03-C23.g1 Salt treated rice ... 321 8e-085
gb|CV731556.1|CV731556 FLO--05-K07.b1 Rice flower lambda ph... 321 8e-085
gb|CV732517.1|CV732517 FLO--07-A10.g1 Rice flower lambda ph... 321 8e-085
gb|AU097670.1|AU097670 AU097670 Rice panicle (longer than 1... 319 3e-084
gb|AU174701.1|AU174701 AU174701 Rice cDNA from leaf Oryza s... 319 3e-084
gb|CV730589.1|CV730589 FLO--04-D06.g1 Rice flower lambda ph... 319 3e-084
gb|CV732640.1|CV732640 FLO--07-D08.b1 Rice flower lambda ph... 319 3e-084
gb|AACV01002648.1| Oryza sativa (japonica cultivar-group) c... 319 3e-084
ref|NM_190523.1| Oryza sativa (japonica cultivar-group), p... 319 3e-084
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 319 3e-084
dbj|AP003231.3| Oryza sativa (japonica cultivar-group) geno... 319 3e-084
dbj|AP003241.3| Oryza sativa (japonica cultivar-group) geno... 319 3e-084
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 319 3e-084
gb|CV727136.1|CV727136 14Salt--05-C06.b1 Salt treated rice ... 317 1e-083
gb|CV729459.1|CV729459 FLO--02-F22.b1 Rice flower lambda ph... 317 1e-083
gb|CV729577.1|CV729577 FLO--02-J14.g1 Rice flower lambda ph... 317 1e-083
gb|CV727430.1|CV727430 14Salt--05-J04.g1 Salt treated rice ... 315 5e-083
gb|CV729576.1|CV729576 FLO--02-J14.b1 Rice flower lambda ph... 315 5e-083
gb|AU065894.1|AU065894 AU065894 Rice green shoot Oryza sati... 313 2e-082
gb|CV726600.1|CV726600 14Salt--04-F09.g1 Salt treated rice ... 313 2e-082
gb|CV734350.1|CV734350 FLO--09-K18.b1 Rice flower lambda ph... 313 2e-082
gb|C97158.1|C97158 C97158 Rice callus Oryza sativa (japonic... 311 7e-082
gb|AU064314.2|AU064314 AU064314 Rice panicle (longer than 1... 311 7e-082
gb|CV728989.1|CV728989 FLO--01-J16.g1 Rice flower lambda ph... 311 7e-082
gb|CV729192.1|CV729192 FLO--01-O12.g1 Rice flower lambda ph... 311 7e-082
gb|CV731426.1|CV731426 FLO--05-H09.g1 Rice flower lambda ph... 311 7e-082
gb|CV733685.1|CV733685 FLO--08-L10.g1 Rice flower lambda ph... 311 7e-082
gb|CV734351.1|CV734351 FLO--09-K18.g1 Rice flower lambda ph... 311 7e-082
gb|AU182176.1|AU182176 AU182176 Rice callus (2001) Oryza sa... 309 3e-081
gb|CV728663.1|CV728663 FLO--01-B21.g1 Rice flower lambda ph... 309 3e-081
gb|CV731957.1|CV731957 FLO--06-D15.b1 Rice flower lambda ph... 309 3e-081
gb|CV731958.1|CV731958 FLO--06-D15.g1 Rice flower lambda ph... 309 3e-081
gb|CF293431.1|CF293431 30DGS--02-J22.g1 Rice leaf plasmid c... 307 1e-080
gb|CV725419.1|CV725419 14Salt--02-H24.g1 Salt treated rice ... 305 5e-080
gb|CV725903.1|CV725903 14Salt--03-E01.g1 Salt treated rice ... 305 5e-080
gb|CV731557.1|CV731557 FLO--05-K07.g1 Rice flower lambda ph... 305 5e-080
gb|AZ130708.1|AZ130708 OSJNBb0062D13f CUGI Rice BAC Library... 303 2e-079
gb|CF325670.1|CF325670 JMT1--03-N20.g1 AtJMT-overexpressing... 303 2e-079
gb|CV734434.1|CV734434 FLO--09-M20.g1 Rice flower lambda ph... 303 2e-079
gb|AU063158.1|AU063158 AU063158 Rice callus Oryza sativa (j... 301 7e-079
gb|CV731642.1|CV731642 FLO--05-M07.b1 Rice flower lambda ph... 301 7e-079
gb|AU172806.1|AU172806 AU172806 Rice panicle shorter than 3... 299 3e-078
gb|CV729874.1|CV729874 FLO--03-C07.b1 Rice flower lambda ph... 297 1e-077
gb|CV723677.1|CV723677 root--04-G10.g1 Rice root lambda pha... 295 4e-077
gb|AU031162.1|AU031162 AU031162 Rice cDNA from immature lea... 289 3e-075
gb|AU062984.1|AU062984 AU062984 Rice callus Oryza sativa (j... 289 3e-075
gb|CV721437.1|CV721437 YBH--04-C03.b1 Rice before heading y... 289 3e-075
gb|AU075448.1|AU075448 AU075448 Rice cDNA from immature lea... 287 1e-074
gb|CV721456.1|CV721456 YBH--04-D02.b1 Rice before heading y... 287 1e-074
gb|CV729931.1|CV729931 FLO--03-D14.g1 Rice flower lambda ph... 285 4e-074
gb|CF292219.1|CF292219 14ROOT--02-P12.b1 Rice root plasmid ... 281 7e-073
gb|CV721027.1|CV721027 YBH--02-K11.b1 Rice before heading y... 281 7e-073
gb|C74089.1|C74089 C74089 Rice panicle shorter than 3cm Ory... 278 1e-071
gb|CF292041.1|CF292041 14ROOT--02-L10.g1 Rice root plasmid ... 278 1e-071
gb|CV732641.1|CV732641 FLO--07-D08.g1 Rice flower lambda ph... 278 1e-071
gb|AC117265.2| Oryza sativa (japonica cultivar-group) chrom... 278 1e-071
gb|AACV01012349.1| Oryza sativa (japonica cultivar-group) c... 278 1e-071
ref|XM_475367.1| Oryza sativa (japonica cultivar-group), p... 278 1e-071
ref|NT_107213.1| Oryza sativa (japonica cultivar-group) 278 1e-071
gb|CA999413.1|CA999413 S234H_C02 Rice cold stress germinati... 276 4e-071
gb|CV720894.1|CV720894 YBH--02-D09.b1 Rice before heading y... 276 4e-071
gb|CV729413.1|CV729413 FLO--02-E17.b1 Rice flower lambda ph... 276 4e-071
gb|D22681.1|D22681 RICC0893A Rice callus Oryza sativa (japo... 272 6e-070
gb|AU095013.1|AU095013 AU095013 Rice immature leaf includin... 272 6e-070
gb|CF290948.1|CF290948 14ROOT--01-D01.g1 Rice root plasmid ... 272 6e-070
gb|CV734120.1|CV734120 FLO--09-F11.g1 Rice flower lambda ph... 270 2e-069
gb|CF292228.1|CF292228 14ROOT--02-P16.g1 Rice root plasmid ... 264 2e-067
gb|CV733074.1|CV733074 FLO--07-N06.g1 Rice flower lambda ph... 264 2e-067
gb|CF281521.1|CF281521 14ETL--08-J17.g1 Rice etiolated leaf... 260 2e-066
gb|AU057673.1|AU057673 AU057673 Oryza sativa mature leaf Ni... 258 1e-065
gb|CF290924.1|CF290924 14ROOT--01-C11.b1 Rice root plasmid ... 252 6e-064
gb|CV729896.1|CV729896 FLO--03-C19.b1 Rice flower lambda ph... 250 2e-063
gb|CV733414.1|CV733414 FLO--08-F04.b1 Rice flower lambda ph... 248 9e-063
gb|AU225174.1|AU225174 AU225174 Oryza sativa Koshihikari pi... 244 1e-061
gb|CF312627.1|CF312627 ABF--08-H11.g1 ABF3-overexpressing t... 242 6e-061
gb|CV733684.1|CV733684 FLO--08-L10.b1 Rice flower lambda ph... 242 6e-061
gb|CV720821.1|CV720821 YBH--01-P10.b1 Rice before heading y... 238 9e-060
gb|AU092764.1|AU092764 AU092764 Rice callus Oryza sativa (j... 230 2e-057
gb|AQ157995.1|AQ157995 nbxb0010O24f CUGI Rice BAC Library O... 226 3e-056
gb|CV733085.1|CV733085 FLO--07-N13.g1 Rice flower lambda ph... 218 8e-054
gb|C98207.1|C98207 C98207 Rice callus Oryza sativa (japonic... 214 1e-052
gb|C97210.1|C97210 C97210 Rice callus Oryza sativa (japonic... 210 2e-051
gb|C97239.1|C97239 C97239 Rice callus Oryza sativa (japonic... 210 2e-051
gb|CF280348.1|CF280348 14ETL--06-P18.g1 Rice etiolated leaf... 210 2e-051
gb|CV728988.1|CV728988 FLO--01-J16.b1 Rice flower lambda ph... 200 2e-048
gb|AU097669.1|AU097669 AU097669 Rice callus Oryza sativa (j... 198 8e-048
gb|AU184845.1|AU184845 AU184845 Rice cDNA from young root O... 196 3e-047
gb|D48146.2|D48146 RICS14215A Rice green shoot Oryza sativa... 196 3e-047
gb|CF277856.1|CF277856 14ETL--03-I19.b1 Rice etiolated leaf... 194 1e-046
gb|C97157.1|C97157 C97157 Rice callus Oryza sativa (japonic... 188 7e-045
gb|D23591.1|D23591 RICC3057A Rice callus Oryza sativa (japo... 186 3e-044
gb|AU095590.1|AU095590 AU095590 Rice cDNA from young root O... 182 5e-043
gb|CF277857.1|CF277857 14ETL--03-I19.g1 Rice etiolated leaf... 182 5e-043
gb|CF339158.1|CF339158 RCL1--03-P11.g1 Regenerated callus l... 182 5e-043
gb|CV731377.1|CV731377 FLO--05-G05.g1 Rice flower lambda ph... 180 2e-042
gb|D49215.1|D49215 RICS16333A Rice green shoot Oryza sativa... 178 7e-042
dbj|AK059159.1| Oryza sativa (japonica cultivar-group) cDNA... 178 7e-042
gb|AQ868678.1|AQ868678 nbeb0030B11r CUGI Rice BAC Library (... 176 3e-041
gb|C73966.1|C73966 C73966 Rice panicle shorter than 3cm Ory... 174 1e-040
gb|AU062949.2|AU062949 AU062949 Rice callus Oryza sativa (j... 174 1e-040
gb|D24618.1|D24618 RICR2259A Rice root Oryza sativa (japoni... 170 2e-039
gb|AU082915.1|AU082915 AU082915 Rice callus Oryza sativa (j... 170 2e-039
gb|CV725777.1|CV725777 14Salt--03-B01.g1 Salt treated rice ... 170 2e-039
gb|CF315774.1|CF315774 HD--04-N03.b1 OsHDAC1-overexpressing... 167 3e-038
dbj|AK107061.1| Oryza sativa (japonica cultivar-group) cDNA... 161 2e-036
ref|NT_107134.1| Oryza sativa (japonica cultivar-group) 161 2e-036
gb|AACV01022357.1| Oryza sativa (japonica cultivar-group) c... 161 2e-036
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 161 2e-036
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 161 2e-036
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 161 2e-036
gb|AC116949.11| Oryza sativa (japonica cultivar-group) chro... 161 2e-036
gb|AC138196.3| Oryza sativa (japonica cultivar-group) chrom... 161 2e-036
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 161 2e-036
gb|AU070557.1|AU070557 AU070557 Rice shoot Oryza sativa (ja... 159 7e-036
gb|D25082.1|D25082 RICR3125A Rice root Oryza sativa (japoni... 157 3e-035
gb|D22526.1|D22526 RICC0138B Rice callus Oryza sativa (japo... 155 1e-034
gb|CF334828.1|CF334828 JMT--04-E05.g1 AtJMT-overexpressing ... 153 4e-034
gb|CV728224.1|CV728224 14Salt--06-N03.b1 Salt treated rice ... 151 2e-033
gb|AU064441.1|AU064441 AU064441 Rice panicle shorter than 3... 147 2e-032
gb|C74145.1|C74145 C74145 Rice panicle shorter than 3cm Ory... 145 1e-031
gb|D40363.1|D40363 RICS2285A Rice shoot Oryza sativa (japon... 141 2e-030
gb|C27926.1|C27926 C27926 Rice callus cDNA Oryza sativa (ja... 141 2e-030
gb|CF278595.1|CF278595 14ETL--04-I24.g1 Rice etiolated leaf... 141 2e-030
gb|D15624.1|D15624 RICC0972A Rice callus Oryza sativa (japo... 139 6e-030
gb|CV730130.1|CV730130 FLO--03-I07.b1 Rice flower lambda ph... 139 6e-030
gb|AU058172.1|AU058172 AU058172 Oryza sativa Nipponbare imm... 137 2e-029
gb|C74202.1|C74202 C74202 Rice panicle shorter than 3cm Ory... 133 4e-028
gb|AU097667.1|AU097667 AU097667 Rice callus Oryza sativa (j... 131 1e-027
gb|AU096554.1|AU096554 AU096554 Rice green shoot Oryza sati... 125 9e-026
gb|AU064386.1|AU064386 AU064386 Rice panicle shorter than 3... 121 1e-024
gb|CV729460.1|CV729460 FLO--02-F22.g1 Rice flower lambda ph... 117 2e-023
gb|CV731376.1|CV731376 FLO--05-G05.b1 Rice flower lambda ph... 117 2e-023
gb|D22527.1|D22527 RICC0138A Rice callus Oryza sativa (japo... 113 3e-022
gb|CV725556.1|CV725556 14Salt--02-L07.b1 Salt treated rice ... 113 3e-022
gb|AU058177.1|AU058177 AU058177 Oryza sativa Nipponbare imm... 111 1e-021
gb|AU058305.1|AU058305 AU058305 Oryza sativa Nipponbare imm... 111 1e-021
gb|C27445.1|C27445 C27445 Rice callus cDNA Oryza sativa (ja... 109 5e-021
gb|C27000.1|C27000 C27000 Rice callus cDNA Oryza sativa (ja... 105 8e-020
gb|AU062423.1|AU062423 AU062423 Rice callus Oryza sativa (j... 105 8e-020
gb|D47132.1|D47132 RICS12273A Rice green shoot Oryza sativa... 103 3e-019
gb|C74297.1|C74297 C74297 Rice panicle shorter than 3cm Ory... 103 3e-019
gb|AU174702.1|AU174702 AU174702 Rice cDNA from leaf Oryza s... 103 3e-019
gb|D23046.1|D23046 RICC2090A Rice callus Oryza sativa (japo... 101 1e-018
gb|AU029901.1|AU029901 AU029901 Rice cDNA from immature lea... 100 5e-018
gb|D23918.1|D23918 RICR0573A Rice root Oryza sativa (japoni... 98 2e-017
gb|AU030152.1|AU030152 AU030152 Rice cDNA from immature lea... 96 8e-017
gb|CV729930.1|CV729930 FLO--03-D14.b1 Rice flower lambda ph... 96 8e-017
gb|AU063733.1|AU063733 AU063733 Rice callus Oryza sativa (j... 94 3e-016
dbj|AK108119.1| Oryza sativa (japonica cultivar-group) cDNA... 92 1e-015
gb|CV729554.1|CV729554 FLO--02-I20.b1 Rice flower lambda ph... 90 5e-015
gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbar... 90 5e-015
dbj|AP004558.3| Oryza sativa (japonica cultivar-group) geno... 90 5e-015
dbj|AP004665.4| Oryza sativa (japonica cultivar-group) geno... 90 5e-015
gb|AACV01006503.1| Oryza sativa (japonica cultivar-group) c... 90 5e-015
gb|AACV01018587.1| Oryza sativa (japonica cultivar-group) c... 90 5e-015
gb|AU097666.1|AU097666 AU097666 Rice callus Oryza sativa (j... 88 2e-014
gb|CF338670.1|CF338670 RCL1--02-G18.g1 Regenerated callus l... 88 2e-014
gb|CV733627.1|CV733627 FLO--08-K01.g1 Rice flower lambda ph... 88 2e-014
gb|CV727986.1|CV727986 14Salt--06-G22.g1 Salt treated rice ... 86 8e-014
dbj|AK106505.1| Oryza sativa (japonica cultivar-group) cDNA... 84 3e-013
dbj|AP003918.3| Oryza sativa (japonica cultivar-group) geno... 84 3e-013
ref|NT_107078.1| Oryza sativa (japonica cultivar-group) 84 3e-013
dbj|AP006162.2| Oryza sativa (japonica cultivar-group) geno... 84 3e-013
gb|AACV01017940.1| Oryza sativa (japonica cultivar-group) c... 84 3e-013
gb|AACV01020566.1| Oryza sativa (japonica cultivar-group) c... 84 3e-013
dbj|AP005390.2| Oryza sativa (japonica cultivar-group) geno... 84 3e-013
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 84 3e-013
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 84 3e-013
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 84 3e-013
gb|AQ161058.1|AQ161058 nbxb0006M04f CUGI Rice BAC Library O... 82 1e-012
gb|AZ046676.1|AZ046676 nbeb0095E23f CUGI Rice BAC Library (... 82 1e-012
gb|C72746.1|C72746 C72746 Rice panicle at flowering stage O... 82 1e-012
gb|D23468.1|D23468 RICC2857A Rice callus Oryza sativa (japo... 82 1e-012
gb|AU172479.1|AU172479 AU172479 Rice panicle at flowering s... 82 1e-012
dbj|AK070276.1| Oryza sativa (japonica cultivar-group) cDNA... 82 1e-012
emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC O... 82 1e-012
emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC O... 82 1e-012
ref|NT_107151.1| Oryza sativa (japonica cultivar-group) 82 1e-012
gb|AACV01023987.1| Oryza sativa (japonica cultivar-group) c... 82 1e-012
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 82 1e-012
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 82 1e-012
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 82 1e-012
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 82 1e-012
gb|C97215.2|C97215 C97215 Rice callus Oryza sativa (japonic... 80 5e-012
gb|AU062951.1|AU062951 AU062951 Rice callus Oryza sativa (j... 76 8e-011
gb|CF315295.1|CF315295 HD--04-C15.g1 OsHDAC1-overexpressing... 76 8e-011
gb|AC135914.2| Oryza sativa (japonica cultivar-group) chrom... 74 3e-010
gb|AC136226.2| Oryza sativa (japonica cultivar-group) chrom... 74 3e-010
gb|AACV01011154.1| Oryza sativa (japonica cultivar-group) c... 74 3e-010
ref|NT_107225.1| Oryza sativa (japonica cultivar-group) 74 3e-010
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 74 3e-010
gb|AC129224.2| Oryza sativa (japonica cultivar-group) chrom... 70 5e-009
gb|AC120888.2| Oryza sativa (japonica cultivar-group) chrom... 70 5e-009
ref|NT_107135.1| Oryza sativa (japonica cultivar-group) 70 5e-009
gb|AACV01018694.1| Oryza sativa (japonica cultivar-group) c... 70 5e-009
gb|AACV01023698.1| Oryza sativa (japonica cultivar-group) c... 70 5e-009
ref|XM_482672.1| Oryza sativa (japonica cultivar-group), mRNA 70 5e-009
ref|XM_482887.1| Oryza sativa (japonica cultivar-group), mRNA 70 5e-009
dbj|AP004693.3| Oryza sativa (japonica cultivar-group) geno... 70 5e-009
gb|CH401266.1| Oryza sativa (japonica cultivar-group) chrom... 70 5e-009
gb|CF315294.1|CF315294 HD--04-C15.b1 OsHDAC1-overexpressing... 68 2e-008
gb|CF313652.1|CF313652 HD--01-N17.b1 OsHDAC1-overexpressing... 66 7e-008
dbj|AK059525.1| Oryza sativa (japonica cultivar-group) cDNA... 64 3e-007
gb|AC137921.2| Oryza sativa chromosome 3 BAC OSJNBa0027H16 ... 64 3e-007
gb|AACV01007221.1| Oryza sativa (japonica cultivar-group) c... 64 3e-007
gb|AACV01020975.1| Oryza sativa (japonica cultivar-group) c... 64 3e-007
ref|NT_080061.1| Oryza sativa (japonica cultivar-group) chr... 64 3e-007
ref|XM_463083.1| Oryza sativa (japonica cultivar-group), mRNA 64 3e-007
ref|XM_472402.1| Oryza sativa (japonica cultivar-group), p... 64 3e-007
ref|NT_107174.1| Oryza sativa (japonica cultivar-group) 64 3e-007
gb|CH401245.1| Oryza sativa (japonica cultivar-group) chrom... 64 3e-007
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 64 3e-007
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 64 3e-007
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 64 3e-007
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 64 3e-007
gb|D39530.1|D39530 RICS0937A Rice shoot Oryza sativa (japon... 62 1e-006
gb|AU093193.1|AU093193 AU093193 Rice callus Oryza sativa (j... 62 1e-006
gb|CF279284.1|CF279284 14ETL--05-I13.b1 Rice etiolated leaf... 62 1e-006
dbj|AK063280.1| Oryza sativa (japonica cultivar-group) cDNA... 60 4e-006
dbj|AK063319.1| Oryza sativa (japonica cultivar-group) cDNA... 60 4e-006
ref|NT_079878.2| Oryza sativa (japonica cultivar-group) 60 4e-006
gb|AC136519.3| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
dbj|AP005929.3| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
gb|AACV01011107.1| Oryza sativa (japonica cultivar-group) c... 60 4e-006
gb|AACV01014110.1| Oryza sativa (japonica cultivar-group) c... 60 4e-006
ref|XM_476102.1| Oryza sativa (japonica cultivar-group), p... 60 4e-006
ref|NT_107224.1| Oryza sativa (japonica cultivar-group) 60 4e-006
gb|AC136520.3| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
gb|CH401214.1| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 60 4e-006
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 60 4e-006
gb|CV733062.1|CV733062 FLO--07-M24.b1 Rice flower lambda ph... 58 2e-005
gb|AQ794354.1|AQ794354 nbxb0052H03r CUGI Rice BAC Library O... 56 7e-005
gb|CF279532.1|CF279532 14ETL--05-N20.g1 Rice etiolated leaf... 56 7e-005
ref|NT_107237.1| Oryza sativa (japonica cultivar-group) 56 7e-005
dbj|AP006164.2| Oryza sativa (japonica cultivar-group) geno... 56 7e-005
dbj|AP006166.3| Oryza sativa (japonica cultivar-group) geno... 56 7e-005
gb|AACV01013677.1| Oryza sativa (japonica cultivar-group) c... 56 7e-005
gb|CH401210.1| Oryza sativa (japonica cultivar-group) chrom... 56 7e-005
gb|AU093220.1|AU093220 AU093220 Rice callus Oryza sativa (j... 54 3e-004
gb|CF296222.1|CF296222 30DGS--06-H23.g1 Rice leaf plasmid c... 54 3e-004
dbj|AP004461.3| Oryza sativa (japonica cultivar-group) geno... 54 3e-004
dbj|AP005740.3| Oryza sativa (japonica cultivar-group) geno... 54 3e-004
gb|AACV01017271.1| Oryza sativa (japonica cultivar-group) c... 54 3e-004
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 54 3e-004
gb|C72382.1|C72382 C72382 Rice panicle at flowering stage O... 52 0.001
dbj|AP005532.3| Oryza sativa (japonica cultivar-group) geno... 52 0.001
gb|AACV01003979.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
gb|AACV01009701.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
gb|AACV01021331.1| Oryza sativa (japonica cultivar-group) c... 52 0.001
ref|NT_080065.1| Oryza sativa (japonica cultivar-group) chr... 52 0.001
ref|NT_107198.1| Oryza sativa (japonica cultivar-group) 52 0.001
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 52 0.001
gb|CH401253.1| Oryza sativa (japonica cultivar-group) chrom... 52 0.001
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 52 0.001
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 52 0.001
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 52 0.001
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 52 0.001
emb|AL662945.3|OSJN00141 Oryza sativa genomic DNA, chromoso... 52 0.001
emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromoso... 52 0.001
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 52 0.001
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 52 0.001
gb|AC083945.3| Oryza sativa (japonica cultivar-group) chrom... 52 0.001
gb|AQ870965.1|AQ870965 nbeb0041J05r CUGI Rice BAC Library (... 50 0.004
gb|CA755693.1|CA755693 BR030026001_BR030_B03_18_025.ab1 OA ... 50 0.004
gb|AC104714.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
gb|AC104715.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
gb|AC087851.4|AC087851 Oryza sativa chromosome 3 BAC OSJNBb... 50 0.004
gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 ... 50 0.004
gb|AC130603.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
dbj|AP005286.3| Oryza sativa (japonica cultivar-group) geno... 50 0.004
dbj|AP005879.3| Oryza sativa (japonica cultivar-group) geno... 50 0.004
dbj|AP004801.3| Oryza sativa (japonica cultivar-group) geno... 50 0.004
gb|AACV01002319.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01003786.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01004890.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01007661.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01007758.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01012563.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01012890.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01019593.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
gb|AACV01019594.1| Oryza sativa (japonica cultivar-group) c... 50 0.004
dbj|AP002837.2| Oryza sativa (japonica cultivar-group) geno... 50 0.004
ref|NT_107081.1| Oryza sativa (japonica cultivar-group) 50 0.004
ref|NT_107217.1| Oryza sativa (japonica cultivar-group) 50 0.004
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 50 0.004
dbj|AP001389.1| Oryza sativa (japonica cultivar-group) geno... 50 0.004
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 50 0.004
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 50 0.004
dbj|AP002972.3| Oryza sativa (japonica cultivar-group) geno... 50 0.004
gb|CH401241.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.004
gb|CF279285.1|CF279285 14ETL--05-I13.g1 Rice etiolated leaf... 48 0.017
emb|AL731874.4|CNS08C8E Oryza sativa chromosome 12, . BAC O... 48 0.017
gb|AC139174.3| Oryza sativa chromosome 3 BAC OSJNBb0065L20 ... 48 0.017
dbj|AP005069.2| Oryza sativa (japonica cultivar-group) geno... 48 0.017
gb|AC108501.2| Oryza sativa (japonica cultivar-group) chrom... 48 0.017
ref|NT_079833.2| Oryza sativa (japonica cultivar-group) 48 0.017
ref|NT_107211.1| Oryza sativa (japonica cultivar-group) 48 0.017
gb|AACV01002285.1| Oryza sativa (japonica cultivar-group) c... 48 0.017
gb|AACV01007551.1| Oryza sativa (japonica cultivar-group) c... 48 0.017
gb|AACV01011256.1| Oryza sativa (japonica cultivar-group) c... 48 0.017
gb|AACV01012051.1| Oryza sativa (japonica cultivar-group) c... 48 0.017
gb|AACV01020855.1| Oryza sativa (japonica cultivar-group) c... 48 0.017
ref|NT_107179.1| Oryza sativa (japonica cultivar-group) 48 0.017
ref|NT_107185.1| Oryza sativa (japonica cultivar-group) 48 0.017
dbj|AP003142.2| Oryza sativa (japonica cultivar-group) geno... 48 0.017
gb|CH401192.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.017
gb|AC165371.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.017
gb|CB643520.1|CB643520 OSJNEb04E01.f OSJNEb Oryza sativa (j... 46 0.068
gb|CF313967.1|CF313967 HD--02-E24.b1 OsHDAC1-overexpressing... 46 0.068
gb|CV722702.1|CV722702 root--01-F02.g1 Rice root lambda pha... 46 0.068
emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC O... 46 0.068
dbj|AP004661.3| Oryza sativa (japonica cultivar-group) geno... 46 0.068
gb|AC108883.1| Genomic sequence for (japonica cultivar-grou... 46 0.068
gb|AC145127.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.068
dbj|AP004554.3| Oryza sativa (japonica cultivar-group) geno... 46 0.068
dbj|AP004884.3| Oryza sativa (japonica cultivar-group) geno... 46 0.068
dbj|AP005820.3| Oryza sativa (japonica cultivar-group) geno... 46 0.068
ref|NT_107112.1| Oryza sativa (japonica cultivar-group) 46 0.068
ref|NT_107119.1| Oryza sativa (japonica cultivar-group) 46 0.068
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 46 0.068
dbj|AP002953.2| Oryza sativa (japonica cultivar-group) geno... 46 0.068
dbj|AP003622.3| Oryza sativa (japonica cultivar-group) geno... 46 0.068
>gb|CF290947.1|CF290947 14ROOT--01-D01.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-D01, mRNA sequence
Length = 672
Score = 460 bits (232), Expect = e-126
Identities = 409/468 (87%), Gaps = 15/468 (3%)
Strand = Plus / Plus
Query: 1014 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgc- 1072
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 92 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgca 151
Query: 1073 --------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtcccc 1124
|||||||||||| ||||| ||||||| ||| |||||||||||||| |||||
Sbjct: 152 gcggagaaggccgagaaggcccccgcggggaagaggcccaaggcggagaagcgtctcccc 211
Query: 1125 gctggcaagtccgctgccaaggagggcggcgagggcaagaggg---gcaggaagaagggc 1181
|| |||||| ||| |||| |||||||||| |||| || | ||||||||||
Sbjct: 212 gccggcaaggccgag---aagggcagcggcgaggggaagaaggcggggaggaagaaggcg 268
Query: 1182 aagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccg 1241
||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 269 aagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagcaggttcacccc 328
Query: 1242 gacattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttc 1301
||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 329 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttc 388
Query: 1302 gagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacc 1361
||||||||||| | ||| ||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 389 gagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagcccaccatcacc 448
Query: 1362 tcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgcc 1421
||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 449 tcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgcc 508
Query: 1422 gtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
||||||||||||||||||||||||||||| |||||||| || ||||||
Sbjct: 509 gtctccgagggcaccaaggccgtcaccaaattcacctccgcttaggct 556
>gb|CB670862.1|CB670862 OSJNEe04C16.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04C16 5', mRNA sequence
Length = 700
Score = 444 bits (224), Expect = e-122
Identities = 407/468 (86%), Gaps = 15/468 (3%)
Strand = Plus / Plus
Query: 1014 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgc- 1072
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 61 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgca 120
Query: 1073 --------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtcccc 1124
|||||||||||| ||||| ||||||||||| |||||||||||||| |||||
Sbjct: 121 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 180
Query: 1125 gctggcaagtccgctgccaaggagggcggcgagggcaagaggg---gcaggaagaagggc 1181
|| |||||| ||| |||| |||||||||| |||| || | ||||||||||
Sbjct: 181 gccggcaaggccgag---aagggcagcggcgaggggaagaaggcggggaggaagaaggcg 237
Query: 1182 aagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccg 1241
||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 238 aagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagcaggttcacccc 297
Query: 1242 gacattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttc 1301
||||| ||||||||||||||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 298 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttc 357
Query: 1302 gagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacc 1361
||||||||||| | ||| ||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 358 gagaagctcgccggagagtccgccaagctcgcccgctacaacaagaagcccaccatcacc 417
Query: 1362 tcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgcc 1421
||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 418 tcccgggagatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgcc 477
Query: 1422 gtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
||||| |||||||||||||||||||| || |||||||| || ||||||
Sbjct: 478 gtctctgagggcaccaaggccgtcactaaattcacctccgcttaggct 525
>dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0434B04
Length = 167029
Score = 444 bits (224), Expect = e-122
Identities = 407/468 (86%), Gaps = 15/468 (3%)
Strand = Plus / Plus
Query: 1014 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgc- 1072
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 135577 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgca 135636
Query: 1073 --------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtcccc 1124
|||||||||||| ||||| ||||||||||| |||||||||||||| |||||
Sbjct: 135637 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 135696
Query: 1125 gctggcaagtccgctgccaaggagggcggcgagggcaagaggg---gcaggaagaagggc 1181
|| |||||| ||| |||| |||||||||| |||| || | ||||||||||
Sbjct: 135697 gccggcaaggccgag---aagggcagcggcgaggggaagaaggcggggaggaagaaggcg 135753
Query: 1182 aagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccg 1241
||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 135754 aagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagcaggttcacccc 135813
Query: 1242 gacattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttc 1301
||||| ||||||||||||||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 135814 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttc 135873
Query: 1302 gagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacc 1361
||||||||||| | ||| ||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 135874 gagaagctcgccggagagtccgccaagctcgcccgctacaacaagaagcccaccatcacc 135933
Query: 1362 tcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgcc 1421
||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 135934 tcccgggagatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgcc 135993
Query: 1422 gtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
||||| |||||||||||||||||||| || |||||||| || ||||||
Sbjct: 135994 gtctctgagggcaccaaggccgtcactaaattcacctccgcttaggct 136041
Score = 394 bits (199), Expect = e-107
Identities = 274/299 (91%)
Strand = Plus / Plus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 123420 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 123479
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| || || ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 123480 aggtccaccccgatatcggcatctcctccaaggccatgtccatcatgaactccttcatca 123539
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 123540 acgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagc 123599
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 123600 ccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcg 123659
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||
Sbjct: 123660 ccaagcacgccgtctccgagggcaccaaggccgtcaccaaattcacctccgcttaggct 123718
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 123248 gcatccatggcgcccaaggcagagaagaagccggccgcgaagaagcccgcggaggaggag 123307
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 123308 cccgcggcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgt 123367
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 123368 ctccccgccggcaag 123382
>gb|AACV01000195.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000195, whole
genome shotgun sequence
Length = 6165
Score = 444 bits (224), Expect = e-122
Identities = 407/468 (86%), Gaps = 15/468 (3%)
Strand = Plus / Minus
Query: 1014 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgc- 1072
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 5755 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgca 5696
Query: 1073 --------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtcccc 1124
|||||||||||| ||||| ||||||||||| |||||||||||||| |||||
Sbjct: 5695 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 5636
Query: 1125 gctggcaagtccgctgccaaggagggcggcgagggcaagaggg---gcaggaagaagggc 1181
|| |||||| ||| |||| |||||||||| |||| || | ||||||||||
Sbjct: 5635 gccggcaaggccgag---aagggcagcggcgaggggaagaaggcggggaggaagaaggcg 5579
Query: 1182 aagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccg 1241
||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 5578 aagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagcaggttcacccc 5519
Query: 1242 gacattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttc 1301
||||| ||||||||||||||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 5518 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttc 5459
Query: 1302 gagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacc 1361
||||||||||| | ||| ||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 5458 gagaagctcgccggagagtccgccaagctcgcccgctacaacaagaagcccaccatcacc 5399
Query: 1362 tcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgcc 1421
||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 5398 tcccgggagatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgcc 5339
Query: 1422 gtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
||||| |||||||||||||||||||| || |||||||| || ||||||
Sbjct: 5338 gtctctgagggcaccaaggccgtcactaaattcacctccgcttaggct 5291
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 444 bits (224), Expect = e-122
Identities = 407/468 (86%), Gaps = 15/468 (3%)
Strand = Plus / Plus
Query: 1014 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgc- 1072
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 2683604 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgca 2683663
Query: 1073 --------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtcccc 1124
|||||||||||| ||||| ||||||||||| |||||||||||||| |||||
Sbjct: 2683664 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 2683723
Query: 1125 gctggcaagtccgctgccaaggagggcggcgagggcaagaggg---gcaggaagaagggc 1181
|| |||||| ||| |||| |||||||||| |||| || | ||||||||||
Sbjct: 2683724 gccggcaaggccgag---aagggcagcggcgaggggaagaaggcggggaggaagaaggcg 2683780
Query: 1182 aagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccg 1241
||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 2683781 aagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagcaggttcacccc 2683840
Query: 1242 gacattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttc 1301
||||| ||||||||||||||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 2683841 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttc 2683900
Query: 1302 gagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacc 1361
||||||||||| | ||| ||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 2683901 gagaagctcgccggagagtccgccaagctcgcccgctacaacaagaagcccaccatcacc 2683960
Query: 1362 tcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgcc 1421
||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 2683961 tcccgggagatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgcc 2684020
Query: 1422 gtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
||||| |||||||||||||||||||| || |||||||| || ||||||
Sbjct: 2684021 gtctctgagggcaccaaggccgtcactaaattcacctccgcttaggct 2684068
Score = 408 bits (206), Expect = e-111
Identities = 266/286 (93%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2854695 ggaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2854636
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2854635 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2854576
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 2854575 acgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagc 2854516
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| ||||| |
Sbjct: 2854515 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttg 2854456
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 1456
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2854455 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 2854410
Score = 404 bits (204), Expect = e-110
Identities = 276/300 (92%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 2869161 aggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaag 2869220
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2869221 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 2869280
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 2869281 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 2869340
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 2869341 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctt 2869400
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||| || |||||||||||||| || ||||||
Sbjct: 2869401 gccaagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctccgcttaggct 2869460
Score = 396 bits (200), Expect = e-107
Identities = 275/300 (91%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2835143 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2835084
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2835083 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2835024
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
| |||||||||||||||||||| | ||| ||||||||||||||||||| ||||||||||
Sbjct: 2835023 atgatatcttcgagaagctcgccggagagtccgccaagctcgcgcgctacaacaagaagc 2834964
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| |||||||
Sbjct: 2834963 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagctcg 2834904
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggctg 1470
|||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 2834903 ccaagcacgccgtctccgagggcaccaaggccgttaccaagttcacttcctcctaggctg 2834844
Score = 394 bits (199), Expect = e-107
Identities = 274/299 (91%)
Strand = Plus / Plus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2671447 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2671506
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| || || ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2671507 aggtccaccccgatatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2671566
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 2671567 acgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagc 2671626
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 2671627 ccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcg 2671686
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||
Sbjct: 2671687 ccaagcacgccgtctccgagggcaccaaggccgtcaccaaattcacctccgcttaggct 2671745
Score = 391 bits (197), Expect = e-105
Identities = 275/301 (91%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2841756 ggaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2841697
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2841696 aggttcaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2841637
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 2841636 acgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagc 2841577
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| ||||| ||||||||||| ||||||||||| ||||| |||||||
Sbjct: 2841576 ccaccatcacctcccgggagattcagacctccgtccgcctcgtcctccccggcgagctcg 2841517
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggctg 1470
||||||||||||||||||||||||| ||||||||||||||||| || || || |||||||
Sbjct: 2841516 ccaagcacgccgtctccgagggcacgaaggccgtcaccaagtttacttccgcttaggctg 2841457
Query: 1471 c 1471
|
Sbjct: 2841456 c 2841456
Score = 391 bits (197), Expect = e-105
Identities = 266/289 (92%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2817332 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2817273
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2817272 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2817213
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| | ||| ||||||||||||||||||| ||||||||||
Sbjct: 2817212 acgacatcttcgagaagctcgccggggagtccgccaagctcgcgcgctacaacaagaagc 2817153
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| ||||||||||| || ||||||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 2817152 ccaccatcacctcacgggagatccagacctccgtccgcctcgtcctccccggcgagctcg 2817093
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctc 1459
||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 2817092 ccaagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctc 2817044
Score = 337 bits (170), Expect = 1e-089
Identities = 233/254 (91%)
Strand = Plus / Minus
Query: 1204 agatctacatcttcaaggtgctgaagcaggtgcacccggacattggcatctcctccaagg 1263
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 17500704 agatctacatcttcaaggtcctgaagcaggtgcacccggacatcggcatctcctccaagg 17500645
Query: 1264 ccatgtcgatcatgaactccttcattaacgatatcttcgagaagctcgctgctgaggccg 1323
||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 17500644 ccatgtcgatcatgaactccttcatcaacgacatcttcgagaagctcgcgcaggaggccg 17500585
Query: 1324 ccaagctcgcgcgctataacaagaagcctaccatcacctcccgtgagatccagacctccg 1383
|| | ||||| ||||| ||||||||||| | | ||||||||| |||||| |||||||||
Sbjct: 17500584 cccacctcgcccgctacaacaagaagcccatcgccacctcccgcgagatctagacctccg 17500525
Query: 1384 tgcgcctcgtccttcccggggagctcgccaagcacgccgtctccgagggcaccaaggccg 1443
| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 17500524 tccgcctcgtcctccccggcgagctcgccaagcacgccgtctccgagggcaccaaggccg 17500465
Query: 1444 tcaccaagttcacc 1457
||||||||||||||
Sbjct: 17500464 tcaccaagttcacc 17500451
Score = 319 bits (161), Expect = 3e-084
Identities = 278/317 (87%)
Strand = Plus / Minus
Query: 1140 gccaaggagggcggcgagggcaagaggggcaggaagaagggcaagaagagcgtggagacc 1199
|||||||||||||||| | |||| ||| | |||||||| |||||||||||| || ||
Sbjct: 36088428 gccaaggagggcggcggcgagaagaaggggaagaagaaggccaagaagagcgtcgaaact 36088369
Query: 1200 tacaagatctacatcttcaaggtgctgaagcaggtgcacccggacattggcatctcctcc 1259
|| ||||||||||| |||||||| || ||||||||||| || || || || || || |||
Sbjct: 36088368 tataagatctacattttcaaggtcctcaagcaggtgcatcccgatatcgggatatcgtcc 36088309
Query: 1260 aaggccatgtcgatcatgaactccttcattaacgatatcttcgagaagctcgctgctgag 1319
||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 36088308 aaggccatgtcgatcatgaactcgttcatcaacgatatcttcgagaagctcgcccaggag 36088249
Query: 1320 gccgccaagctcgcgcgctataacaagaagcctaccatcacctcccgtgagatccagacc 1379
|||||| ||||| ||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 36088248 gccgcccgtctcgcccgctacaacaagaagccgaccatcacctcccgcgagatccagacc 36088189
Query: 1380 tccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtctccgagggcaccaag 1439
|| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 36088188 tcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctctgagggcaccaag 36088129
Query: 1440 gccgtcaccaagttcac 1456
|||||||||||||||||
Sbjct: 36088128 gccgtcaccaagttcac 36088112
Score = 125 bits (63), Expect = 9e-026
Identities = 116/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2868984 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 2869043
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 2869044 cccgcggcggagaaggccgagaaggccccggccgggaagaagcccaaggcggagaagcgg 2869103
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2869104 ctccccgccggcaag 2869118
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2841928 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 2841869
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 2841868 cccgcggcagagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgt 2841809
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2841808 ctccccgccggcaag 2841794
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 2835315 gcatccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggag 2835256
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 2835255 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgc 2835196
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2835195 ctccccgccggcaag 2835181
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2671275 gcatccatggcgcccaaggcagagaagaagccggccgcgaagaagcccgcggaggaggag 2671334
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 2671335 cccgcggcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgt 2671394
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2671395 ctccccgccggcaag 2671409
Score = 115 bits (58), Expect = 9e-023
Identities = 116/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 2817504 gcatccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggag 2817445
Query: 1068 cccgcggccgagaaggc-------gccc--gccgggaagaagccgaaggcggagaagcgg 1118
|||||||| |||||||| |||| || ||||||||||| ||||||||||||||
Sbjct: 2817444 cccgcggcggagaaggccgagaaggccctggcggggaagaagcccaaggcggagaagcgt 2817385
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2817384 ctccccgccggcaag 2817370
Score = 109 bits (55), Expect = 5e-021
Identities = 114/135 (84%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2854867 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 2854808
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 2854807 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgt 2854748
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2854747 ctccccgccggcaag 2854733
Score = 81.8 bits (41), Expect = 1e-012
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 1012 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggag 1064
|||||||||||||||| |||||||||||||||| ||||||||||| |||||||
Sbjct: 36088523 cgatggcgcccaaggcggagaagaagcccgcggagaagaagccggtggaggag 36088471
Score = 54.0 bits (27), Expect = 3e-004
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 1012 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagcc 1054
|||||||||||||||| ||||||||||| | || |||||||||
Sbjct: 17500842 cgatggcgcccaaggcagagaagaagccggtggagaagaagcc 17500800
Score = 50.1 bits (25), Expect = 0.004
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 1261 aggccatgtcgatcatgaactccttcattaacgatatcttcgagaagct 1309
|||||||||| |||||||| |||||||| ||||| | |||||||||||
Sbjct: 31022845 aggccatgtctatcatgaaatccttcatcaacgacgttttcgagaagct 31022797
Score = 48.1 bits (24), Expect = 0.017
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1200 tacaagatctacatcttcaaggtgctgaagca 1231
||||||||| ||||||||||||||| ||||||
Sbjct: 30557158 tacaagatcaacatcttcaaggtgcagaagca 30557189
Score = 46.1 bits (23), Expect = 0.068
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1197 acctacaagatctacatcttcaaggtg 1223
|||||| ||||||||||||||||||||
Sbjct: 20130030 acctacgagatctacatcttcaaggtg 20130056
Score = 46.1 bits (23), Expect = 0.068
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1199 ctacaagatctacatcttcaaggtgct 1225
|||||||||||| ||||||||||||||
Sbjct: 12267559 ctacaagatctatatcttcaaggtgct 12267585
Score = 46.1 bits (23), Expect = 0.068
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 262 acggcgccaccaacgccacgctcatcaacga 292
||||||||| |||||||| ||||||||||||
Sbjct: 7305477 acggcgccatcaacgccatgctcatcaacga 7305447
>ref|NT_036312.3| Oryza sativa (japonica cultivar-group)
Length = 10050053
Score = 444 bits (224), Expect = e-122
Identities = 407/468 (86%), Gaps = 15/468 (3%)
Strand = Plus / Plus
Query: 1014 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgc- 1072
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 2683604 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgca 2683663
Query: 1073 --------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtcccc 1124
|||||||||||| ||||| ||||||||||| |||||||||||||| |||||
Sbjct: 2683664 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 2683723
Query: 1125 gctggcaagtccgctgccaaggagggcggcgagggcaagaggg---gcaggaagaagggc 1181
|| |||||| ||| |||| |||||||||| |||| || | ||||||||||
Sbjct: 2683724 gccggcaaggccgag---aagggcagcggcgaggggaagaaggcggggaggaagaaggcg 2683780
Query: 1182 aagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccg 1241
||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 2683781 aagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagcaggttcacccc 2683840
Query: 1242 gacattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttc 1301
||||| ||||||||||||||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 2683841 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttc 2683900
Query: 1302 gagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacc 1361
||||||||||| | ||| ||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 2683901 gagaagctcgccggagagtccgccaagctcgcccgctacaacaagaagcccaccatcacc 2683960
Query: 1362 tcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgcc 1421
||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 2683961 tcccgggagatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgcc 2684020
Query: 1422 gtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
||||| |||||||||||||||||||| || |||||||| || ||||||
Sbjct: 2684021 gtctctgagggcaccaaggccgtcactaaattcacctccgcttaggct 2684068
Score = 408 bits (206), Expect = e-111
Identities = 266/286 (93%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2854695 ggaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2854636
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2854635 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2854576
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 2854575 acgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagc 2854516
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| ||||| |
Sbjct: 2854515 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttg 2854456
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 1456
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2854455 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 2854410
Score = 404 bits (204), Expect = e-110
Identities = 276/300 (92%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 2869161 aggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaag 2869220
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2869221 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 2869280
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 2869281 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 2869340
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 2869341 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctt 2869400
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||| || |||||||||||||| || ||||||
Sbjct: 2869401 gccaagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctccgcttaggct 2869460
Score = 396 bits (200), Expect = e-107
Identities = 275/300 (91%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2835143 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2835084
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2835083 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2835024
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
| |||||||||||||||||||| | ||| ||||||||||||||||||| ||||||||||
Sbjct: 2835023 atgatatcttcgagaagctcgccggagagtccgccaagctcgcgcgctacaacaagaagc 2834964
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| |||||||
Sbjct: 2834963 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagctcg 2834904
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggctg 1470
|||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 2834903 ccaagcacgccgtctccgagggcaccaaggccgttaccaagttcacttcctcctaggctg 2834844
Score = 394 bits (199), Expect = e-107
Identities = 274/299 (91%)
Strand = Plus / Plus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2671447 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2671506
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| || || ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2671507 aggtccaccccgatatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2671566
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 2671567 acgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagc 2671626
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 2671627 ccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcg 2671686
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||
Sbjct: 2671687 ccaagcacgccgtctccgagggcaccaaggccgtcaccaaattcacctccgcttaggct 2671745
Score = 391 bits (197), Expect = e-105
Identities = 275/301 (91%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2841756 ggaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2841697
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2841696 aggttcaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2841637
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 2841636 acgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagc 2841577
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| ||||| ||||||||||| ||||||||||| ||||| |||||||
Sbjct: 2841576 ccaccatcacctcccgggagattcagacctccgtccgcctcgtcctccccggcgagctcg 2841517
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggctg 1470
||||||||||||||||||||||||| ||||||||||||||||| || || || |||||||
Sbjct: 2841516 ccaagcacgccgtctccgagggcacgaaggccgtcaccaagtttacttccgcttaggctg 2841457
Query: 1471 c 1471
|
Sbjct: 2841456 c 2841456
Score = 391 bits (197), Expect = e-105
Identities = 266/289 (92%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2817332 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2817273
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2817272 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2817213
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| | ||| ||||||||||||||||||| ||||||||||
Sbjct: 2817212 acgacatcttcgagaagctcgccggggagtccgccaagctcgcgcgctacaacaagaagc 2817153
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| ||||||||||| || ||||||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 2817152 ccaccatcacctcacgggagatccagacctccgtccgcctcgtcctccccggcgagctcg 2817093
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctc 1459
||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 2817092 ccaagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctc 2817044
Score = 125 bits (63), Expect = 9e-026
Identities = 116/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2868984 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 2869043
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 2869044 cccgcggcggagaaggccgagaaggccccggccgggaagaagcccaaggcggagaagcgg 2869103
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2869104 ctccccgccggcaag 2869118
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2841928 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 2841869
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 2841868 cccgcggcagagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgt 2841809
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2841808 ctccccgccggcaag 2841794
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 2835315 gcatccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggag 2835256
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 2835255 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgc 2835196
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2835195 ctccccgccggcaag 2835181
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2671275 gcatccatggcgcccaaggcagagaagaagccggccgcgaagaagcccgcggaggaggag 2671334
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 2671335 cccgcggcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgt 2671394
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2671395 ctccccgccggcaag 2671409
Score = 115 bits (58), Expect = 9e-023
Identities = 116/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 2817504 gcatccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggag 2817445
Query: 1068 cccgcggccgagaaggc-------gccc--gccgggaagaagccgaaggcggagaagcgg 1118
|||||||| |||||||| |||| || ||||||||||| ||||||||||||||
Sbjct: 2817444 cccgcggcggagaaggccgagaaggccctggcggggaagaagcccaaggcggagaagcgt 2817385
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2817384 ctccccgccggcaag 2817370
Score = 109 bits (55), Expect = 5e-021
Identities = 114/135 (84%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2854867 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 2854808
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 2854807 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgt 2854748
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2854747 ctccccgccggcaag 2854733
Score = 46.1 bits (23), Expect = 0.068
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 262 acggcgccaccaacgccacgctcatcaacga 292
||||||||| |||||||| ||||||||||||
Sbjct: 7305317 acggcgccatcaacgccatgctcatcaacga 7305287
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 444 bits (224), Expect = e-122
Identities = 407/468 (86%), Gaps = 15/468 (3%)
Strand = Plus / Plus
Query: 1014 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgc- 1072
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 2743044 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgca 2743103
Query: 1073 --------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtcccc 1124
|||||||||||| ||||| ||||||||||| |||||||||||||| |||||
Sbjct: 2743104 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 2743163
Query: 1125 gctggcaagtccgctgccaaggagggcggcgagggcaagaggg---gcaggaagaagggc 1181
|| |||||| ||| |||| |||||||||| |||| || | ||||||||||
Sbjct: 2743164 gccggcaaggccgag---aagggcagcggcgaggggaagaaggcggggaggaagaaggcg 2743220
Query: 1182 aagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccg 1241
||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 2743221 aagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagcaggttcacccc 2743280
Query: 1242 gacattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttc 1301
||||| ||||||||||||||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 2743281 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttc 2743340
Query: 1302 gagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacc 1361
||||||||||| | ||| ||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 2743341 gagaagctcgccggagagtccgccaagctcgcccgctacaacaagaagcccaccatcacc 2743400
Query: 1362 tcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgcc 1421
||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 2743401 tcccgggagatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgcc 2743460
Query: 1422 gtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
||||| |||||||||||||||||||| || |||||||| || ||||||
Sbjct: 2743461 gtctctgagggcaccaaggccgtcactaaattcacctccgcttaggct 2743508
Score = 408 bits (206), Expect = e-111
Identities = 266/286 (93%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2914632 ggaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2914573
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2914572 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2914513
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 2914512 acgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagc 2914453
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| ||||| |
Sbjct: 2914452 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttg 2914393
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 1456
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2914392 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 2914347
Score = 404 bits (204), Expect = e-110
Identities = 276/300 (92%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 2929098 aggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaag 2929157
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2929158 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 2929217
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 2929218 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 2929277
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 2929278 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctt 2929337
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||| || |||||||||||||| || ||||||
Sbjct: 2929338 gccaagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctccgcttaggct 2929397
Score = 396 bits (200), Expect = e-107
Identities = 275/300 (91%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2895133 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2895074
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2895073 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2895014
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
| |||||||||||||||||||| | ||| ||||||||||||||||||| ||||||||||
Sbjct: 2895013 atgatatcttcgagaagctcgccggagagtccgccaagctcgcgcgctacaacaagaagc 2894954
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| |||||||
Sbjct: 2894953 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagctcg 2894894
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggctg 1470
|||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 2894893 ccaagcacgccgtctccgagggcaccaaggccgttaccaagttcacttcctcctaggctg 2894834
Score = 394 bits (199), Expect = e-107
Identities = 274/299 (91%)
Strand = Plus / Plus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2730701 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2730760
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| || || ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2730761 aggtccaccccgatatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2730820
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 2730821 acgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagc 2730880
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 2730881 ccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcg 2730940
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||
Sbjct: 2730941 ccaagcacgccgtctccgagggcaccaaggccgtcaccaaattcacctccgcttaggct 2730999
Score = 391 bits (197), Expect = e-105
Identities = 266/289 (92%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2874485 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2874426
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2874425 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2874366
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| | ||| ||||||||||||||||||| ||||||||||
Sbjct: 2874365 acgacatcttcgagaagctcgccggggagtccgccaagctcgcgcgctacaacaagaagc 2874306
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| ||||||||||| || ||||||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 2874305 ccaccatcacctcacgggagatccagacctccgtccgcctcgtcctccccggcgagctcg 2874246
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctc 1459
||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 2874245 ccaagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctc 2874197
Score = 125 bits (63), Expect = 9e-026
Identities = 116/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2928921 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 2928980
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 2928981 cccgcggcggagaaggccgagaaggccccggccgggaagaagcccaaggcggagaagcgg 2929040
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2929041 ctccccgccggcaag 2929055
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2901862 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 2901803
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 2901802 cccgcggcagagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgt 2901743
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2901742 ctccccgccggcaag 2901728
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 2895305 gcatccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggag 2895246
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 2895245 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgc 2895186
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2895185 ctccccgccggcaag 2895171
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2730529 gcatccatggcgcccaaggcagagaagaagccggccgcgaagaagcccgcggaggaggag 2730588
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 2730589 cccgcggcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgt 2730648
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2730649 ctccccgccggcaag 2730663
Score = 115 bits (58), Expect = 9e-023
Identities = 116/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 2874657 gcatccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggag 2874598
Query: 1068 cccgcggccgagaaggc-------gccc--gccgggaagaagccgaaggcggagaagcgg 1118
|||||||| |||||||| |||| || ||||||||||| ||||||||||||||
Sbjct: 2874597 cccgcggcggagaaggccgagaaggccctggcggggaagaagcccaaggcggagaagcgt 2874538
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2874537 ctccccgccggcaag 2874523
Score = 109 bits (55), Expect = 5e-021
Identities = 114/135 (84%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2914804 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 2914745
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 2914744 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgt 2914685
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2914684 ctccccgccggcaag 2914670
Score = 95.6 bits (48), Expect = 8e-017
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 1404 gagctcgccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcc 1463
|||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||
Sbjct: 2901514 gagctcgccaagcacgccgtctccgagggcacgaaggccgtcaccaagtttacttccgct 2901455
Query: 1464 taggctgc 1471
||||||||
Sbjct: 2901454 taggctgc 2901447
Score = 91.7 bits (46), Expect = 1e-015
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2901690 ggaagaaggggaacaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2901631
Query: 1231 ag 1232
||
Sbjct: 2901630 ag 2901629
Score = 46.1 bits (23), Expect = 0.068
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 262 acggcgccaccaacgccacgctcatcaacga 292
||||||||| |||||||| ||||||||||||
Sbjct: 7384766 acggcgccatcaacgccatgctcatcaacga 7384736
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 444 bits (224), Expect = e-122
Identities = 407/468 (86%), Gaps = 15/468 (3%)
Strand = Plus / Plus
Query: 1014 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgc- 1072
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 2743044 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgca 2743103
Query: 1073 --------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtcccc 1124
|||||||||||| ||||| ||||||||||| |||||||||||||| |||||
Sbjct: 2743104 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 2743163
Query: 1125 gctggcaagtccgctgccaaggagggcggcgagggcaagaggg---gcaggaagaagggc 1181
|| |||||| ||| |||| |||||||||| |||| || | ||||||||||
Sbjct: 2743164 gccggcaaggccgag---aagggcagcggcgaggggaagaaggcggggaggaagaaggcg 2743220
Query: 1182 aagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccg 1241
||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 2743221 aagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagcaggttcacccc 2743280
Query: 1242 gacattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttc 1301
||||| ||||||||||||||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 2743281 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttc 2743340
Query: 1302 gagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacc 1361
||||||||||| | ||| ||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 2743341 gagaagctcgccggagagtccgccaagctcgcccgctacaacaagaagcccaccatcacc 2743400
Query: 1362 tcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgcc 1421
||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 2743401 tcccgggagatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgcc 2743460
Query: 1422 gtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
||||| |||||||||||||||||||| || |||||||| || ||||||
Sbjct: 2743461 gtctctgagggcaccaaggccgtcactaaattcacctccgcttaggct 2743508
Score = 408 bits (206), Expect = e-111
Identities = 266/286 (93%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2914632 ggaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2914573
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2914572 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2914513
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 2914512 acgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagc 2914453
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| ||||| |
Sbjct: 2914452 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttg 2914393
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 1456
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2914392 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 2914347
Score = 404 bits (204), Expect = e-110
Identities = 276/300 (92%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 2929098 aggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaag 2929157
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2929158 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 2929217
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 2929218 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 2929277
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 2929278 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctt 2929337
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||| || |||||||||||||| || ||||||
Sbjct: 2929338 gccaagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctccgcttaggct 2929397
Score = 396 bits (200), Expect = e-107
Identities = 275/300 (91%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2895133 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2895074
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2895073 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2895014
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
| |||||||||||||||||||| | ||| ||||||||||||||||||| ||||||||||
Sbjct: 2895013 atgatatcttcgagaagctcgccggagagtccgccaagctcgcgcgctacaacaagaagc 2894954
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| |||||||
Sbjct: 2894953 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagctcg 2894894
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggctg 1470
|||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 2894893 ccaagcacgccgtctccgagggcaccaaggccgttaccaagttcacttcctcctaggctg 2894834
Score = 394 bits (199), Expect = e-107
Identities = 274/299 (91%)
Strand = Plus / Plus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2730701 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2730760
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| || || ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2730761 aggtccaccccgatatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2730820
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 2730821 acgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagc 2730880
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 2730881 ccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcg 2730940
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||
Sbjct: 2730941 ccaagcacgccgtctccgagggcaccaaggccgtcaccaaattcacctccgcttaggct 2730999
Score = 391 bits (197), Expect = e-105
Identities = 266/289 (92%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2874485 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2874426
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2874425 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2874366
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| | ||| ||||||||||||||||||| ||||||||||
Sbjct: 2874365 acgacatcttcgagaagctcgccggggagtccgccaagctcgcgcgctacaacaagaagc 2874306
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| ||||||||||| || ||||||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 2874305 ccaccatcacctcacgggagatccagacctccgtccgcctcgtcctccccggcgagctcg 2874246
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctc 1459
||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 2874245 ccaagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctc 2874197
Score = 337 bits (170), Expect = 1e-089
Identities = 233/254 (91%)
Strand = Plus / Minus
Query: 1204 agatctacatcttcaaggtgctgaagcaggtgcacccggacattggcatctcctccaagg 1263
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 17079407 agatctacatcttcaaggtcctgaagcaggtgcacccggacatcggcatctcctccaagg 17079348
Query: 1264 ccatgtcgatcatgaactccttcattaacgatatcttcgagaagctcgctgctgaggccg 1323
||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 17079347 ccatgtcgatcatgaactccttcatcaacgacatcttcgagaagctcgcgcaggaggccg 17079288
Query: 1324 ccaagctcgcgcgctataacaagaagcctaccatcacctcccgtgagatccagacctccg 1383
|| | ||||| ||||| ||||||||||| | | ||||||||| |||||| |||||||||
Sbjct: 17079287 cccacctcgcccgctacaacaagaagcccatcgccacctcccgcgagatctagacctccg 17079228
Query: 1384 tgcgcctcgtccttcccggggagctcgccaagcacgccgtctccgagggcaccaaggccg 1443
| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 17079227 tccgcctcgtcctccccggcgagctcgccaagcacgccgtctccgagggcaccaaggccg 17079168
Query: 1444 tcaccaagttcacc 1457
||||||||||||||
Sbjct: 17079167 tcaccaagttcacc 17079154
Score = 319 bits (161), Expect = 3e-084
Identities = 278/317 (87%)
Strand = Plus / Minus
Query: 1140 gccaaggagggcggcgagggcaagaggggcaggaagaagggcaagaagagcgtggagacc 1199
|||||||||||||||| | |||| ||| | |||||||| |||||||||||| || ||
Sbjct: 35483696 gccaaggagggcggcggcgagaagaaggggaagaagaaggccaagaagagcgtcgaaact 35483637
Query: 1200 tacaagatctacatcttcaaggtgctgaagcaggtgcacccggacattggcatctcctcc 1259
|| ||||||||||| |||||||| || ||||||||||| || || || || || || |||
Sbjct: 35483636 tataagatctacattttcaaggtcctcaagcaggtgcatcccgatatcgggatatcgtcc 35483577
Query: 1260 aaggccatgtcgatcatgaactccttcattaacgatatcttcgagaagctcgctgctgag 1319
||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 35483576 aaggccatgtcgatcatgaactcgttcatcaacgatatcttcgagaagctcgcccaggag 35483517
Query: 1320 gccgccaagctcgcgcgctataacaagaagcctaccatcacctcccgtgagatccagacc 1379
|||||| ||||| ||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 35483516 gccgcccgtctcgcccgctacaacaagaagccgaccatcacctcccgcgagatccagacc 35483457
Query: 1380 tccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtctccgagggcaccaag 1439
|| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 35483456 tcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctctgagggcaccaag 35483397
Query: 1440 gccgtcaccaagttcac 1456
|||||||||||||||||
Sbjct: 35483396 gccgtcaccaagttcac 35483380
Score = 125 bits (63), Expect = 9e-026
Identities = 116/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2928921 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 2928980
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 2928981 cccgcggcggagaaggccgagaaggccccggccgggaagaagcccaaggcggagaagcgg 2929040
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2929041 ctccccgccggcaag 2929055
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2901862 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 2901803
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 2901802 cccgcggcagagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgt 2901743
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2901742 ctccccgccggcaag 2901728
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 2895305 gcatccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggag 2895246
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 2895245 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgc 2895186
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2895185 ctccccgccggcaag 2895171
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2730529 gcatccatggcgcccaaggcagagaagaagccggccgcgaagaagcccgcggaggaggag 2730588
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 2730589 cccgcggcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgt 2730648
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2730649 ctccccgccggcaag 2730663
Score = 115 bits (58), Expect = 9e-023
Identities = 116/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 2874657 gcatccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggag 2874598
Query: 1068 cccgcggccgagaaggc-------gccc--gccgggaagaagccgaaggcggagaagcgg 1118
|||||||| |||||||| |||| || ||||||||||| ||||||||||||||
Sbjct: 2874597 cccgcggcggagaaggccgagaaggccctggcggggaagaagcccaaggcggagaagcgt 2874538
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2874537 ctccccgccggcaag 2874523
Score = 109 bits (55), Expect = 5e-021
Identities = 114/135 (84%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2914804 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 2914745
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 2914744 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgt 2914685
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2914684 ctccccgccggcaag 2914670
Score = 95.6 bits (48), Expect = 8e-017
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 1404 gagctcgccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcc 1463
|||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||
Sbjct: 2901514 gagctcgccaagcacgccgtctccgagggcacgaaggccgtcaccaagtttacttccgct 2901455
Query: 1464 taggctgc 1471
||||||||
Sbjct: 2901454 taggctgc 2901447
Score = 91.7 bits (46), Expect = 1e-015
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2901690 ggaagaaggggaacaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2901631
Query: 1231 ag 1232
||
Sbjct: 2901630 ag 2901629
Score = 81.8 bits (41), Expect = 1e-012
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 1012 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggag 1064
|||||||||||||||| |||||||||||||||| ||||||||||| |||||||
Sbjct: 35483791 cgatggcgcccaaggcggagaagaagcccgcggagaagaagccggtggaggag 35483739
Score = 54.0 bits (27), Expect = 3e-004
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 1012 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagcc 1054
|||||||||||||||| ||||||||||| | || |||||||||
Sbjct: 17079545 cgatggcgcccaaggcagagaagaagccggtggagaagaagcc 17079503
Score = 50.1 bits (25), Expect = 0.004
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 1261 aggccatgtcgatcatgaactccttcattaacgatatcttcgagaagct 1309
|||||||||| |||||||| |||||||| ||||| | |||||||||||
Sbjct: 30573992 aggccatgtctatcatgaaatccttcatcaacgacgttttcgagaagct 30573944
Score = 48.1 bits (24), Expect = 0.017
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1200 tacaagatctacatcttcaaggtgctgaagca 1231
||||||||| ||||||||||||||| ||||||
Sbjct: 30140086 tacaagatcaacatcttcaaggtgcagaagca 30140117
Score = 46.1 bits (23), Expect = 0.068
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1197 acctacaagatctacatcttcaaggtg 1223
|||||| ||||||||||||||||||||
Sbjct: 19722149 acctacgagatctacatcttcaaggtg 19722175
Score = 46.1 bits (23), Expect = 0.068
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1199 ctacaagatctacatcttcaaggtgct 1225
|||||||||||| ||||||||||||||
Sbjct: 12266783 ctacaagatctatatcttcaaggtgct 12266809
Score = 46.1 bits (23), Expect = 0.068
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 262 acggcgccaccaacgccacgctcatcaacga 292
||||||||| |||||||| ||||||||||||
Sbjct: 7384766 acggcgccatcaacgccatgctcatcaacga 7384736
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 444 bits (224), Expect = e-122
Identities = 407/468 (86%), Gaps = 15/468 (3%)
Strand = Plus / Plus
Query: 1014 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgc- 1072
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 2685802 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgca 2685861
Query: 1073 --------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtcccc 1124
|||||||||||| ||||| ||||||||||| |||||||||||||| |||||
Sbjct: 2685862 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 2685921
Query: 1125 gctggcaagtccgctgccaaggagggcggcgagggcaagaggg---gcaggaagaagggc 1181
|| |||||| ||| |||| |||||||||| |||| || | ||||||||||
Sbjct: 2685922 gccggcaaggccgag---aagggcagcggcgaggggaagaaggcggggaggaagaaggcg 2685978
Query: 1182 aagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccg 1241
||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 2685979 aagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagcaggttcacccc 2686038
Query: 1242 gacattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttc 1301
||||| ||||||||||||||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 2686039 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttc 2686098
Query: 1302 gagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacc 1361
||||||||||| | ||| ||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 2686099 gagaagctcgccggagagtccgccaagctcgcccgctacaacaagaagcccaccatcacc 2686158
Query: 1362 tcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgcc 1421
||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 2686159 tcccgggagatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgcc 2686218
Query: 1422 gtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
||||| |||||||||||||||||||| || |||||||| || ||||||
Sbjct: 2686219 gtctctgagggcaccaaggccgtcactaaattcacctccgcttaggct 2686266
Score = 408 bits (206), Expect = e-111
Identities = 266/286 (93%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2856893 ggaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2856834
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2856833 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2856774
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 2856773 acgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagc 2856714
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| ||||| |
Sbjct: 2856713 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttg 2856654
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 1456
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2856653 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 2856608
Score = 404 bits (204), Expect = e-110
Identities = 276/300 (92%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 2871359 aggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaag 2871418
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2871419 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 2871478
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 2871479 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 2871538
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 2871539 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctt 2871598
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||| || |||||||||||||| || ||||||
Sbjct: 2871599 gccaagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctccgcttaggct 2871658
Score = 396 bits (200), Expect = e-107
Identities = 275/300 (91%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2837341 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2837282
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2837281 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2837222
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
| |||||||||||||||||||| | ||| ||||||||||||||||||| ||||||||||
Sbjct: 2837221 atgatatcttcgagaagctcgccggagagtccgccaagctcgcgcgctacaacaagaagc 2837162
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| |||||||
Sbjct: 2837161 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagctcg 2837102
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggctg 1470
|||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 2837101 ccaagcacgccgtctccgagggcaccaaggccgttaccaagttcacttcctcctaggctg 2837042
Score = 394 bits (199), Expect = e-107
Identities = 274/299 (91%)
Strand = Plus / Plus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2673645 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2673704
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| || || ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2673705 aggtccaccccgatatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2673764
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 2673765 acgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagc 2673824
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 2673825 ccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcg 2673884
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||
Sbjct: 2673885 ccaagcacgccgtctccgagggcaccaaggccgtcaccaaattcacctccgcttaggct 2673943
Score = 391 bits (197), Expect = e-105
Identities = 275/301 (91%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2843954 ggaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2843895
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2843894 aggttcaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2843835
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 2843834 acgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagc 2843775
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| ||||| ||||||||||| ||||||||||| ||||| |||||||
Sbjct: 2843774 ccaccatcacctcccgggagattcagacctccgtccgcctcgtcctccccggcgagctcg 2843715
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggctg 1470
||||||||||||||||||||||||| ||||||||||||||||| || || || |||||||
Sbjct: 2843714 ccaagcacgccgtctccgagggcacgaaggccgtcaccaagtttacttccgcttaggctg 2843655
Query: 1471 c 1471
|
Sbjct: 2843654 c 2843654
Score = 391 bits (197), Expect = e-105
Identities = 266/289 (92%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2819530 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 2819471
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 2819470 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 2819411
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| | ||| ||||||||||||||||||| ||||||||||
Sbjct: 2819410 acgacatcttcgagaagctcgccggggagtccgccaagctcgcgcgctacaacaagaagc 2819351
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| ||||||||||| || ||||||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 2819350 ccaccatcacctcacgggagatccagacctccgtccgcctcgtcctccccggcgagctcg 2819291
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctc 1459
||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 2819290 ccaagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctc 2819242
Score = 337 bits (170), Expect = 1e-089
Identities = 233/254 (91%)
Strand = Plus / Minus
Query: 1204 agatctacatcttcaaggtgctgaagcaggtgcacccggacattggcatctcctccaagg 1263
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 17421987 agatctacatcttcaaggtcctgaagcaggtgcacccggacatcggcatctcctccaagg 17421928
Query: 1264 ccatgtcgatcatgaactccttcattaacgatatcttcgagaagctcgctgctgaggccg 1323
||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||
Sbjct: 17421927 ccatgtcgatcatgaactccttcatcaacgacatcttcgagaagctcgcgcaggaggccg 17421868
Query: 1324 ccaagctcgcgcgctataacaagaagcctaccatcacctcccgtgagatccagacctccg 1383
|| | ||||| ||||| ||||||||||| | | ||||||||| |||||| |||||||||
Sbjct: 17421867 cccacctcgcccgctacaacaagaagcccatcgccacctcccgcgagatctagacctccg 17421808
Query: 1384 tgcgcctcgtccttcccggggagctcgccaagcacgccgtctccgagggcaccaaggccg 1443
| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 17421807 tccgcctcgtcctccccggcgagctcgccaagcacgccgtctccgagggcaccaaggccg 17421748
Query: 1444 tcaccaagttcacc 1457
||||||||||||||
Sbjct: 17421747 tcaccaagttcacc 17421734
Score = 319 bits (161), Expect = 3e-084
Identities = 278/317 (87%)
Strand = Plus / Minus
Query: 1140 gccaaggagggcggcgagggcaagaggggcaggaagaagggcaagaagagcgtggagacc 1199
|||||||||||||||| | |||| ||| | |||||||| |||||||||||| || ||
Sbjct: 36007758 gccaaggagggcggcggcgagaagaaggggaagaagaaggccaagaagagcgtcgaaact 36007699
Query: 1200 tacaagatctacatcttcaaggtgctgaagcaggtgcacccggacattggcatctcctcc 1259
|| ||||||||||| |||||||| || ||||||||||| || || || || || || |||
Sbjct: 36007698 tataagatctacattttcaaggtcctcaagcaggtgcatcccgatatcgggatatcgtcc 36007639
Query: 1260 aaggccatgtcgatcatgaactccttcattaacgatatcttcgagaagctcgctgctgag 1319
||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 36007638 aaggccatgtcgatcatgaactcgttcatcaacgatatcttcgagaagctcgcccaggag 36007579
Query: 1320 gccgccaagctcgcgcgctataacaagaagcctaccatcacctcccgtgagatccagacc 1379
|||||| ||||| ||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 36007578 gccgcccgtctcgcccgctacaacaagaagccgaccatcacctcccgcgagatccagacc 36007519
Query: 1380 tccgtgcgcctcgtccttcccggggagctcgccaagcacgccgtctccgagggcaccaag 1439
|| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 36007518 tcggtgcgcctcgtcctccccggcgagctcgccaagcacgccgtctctgagggcaccaag 36007459
Query: 1440 gccgtcaccaagttcac 1456
|||||||||||||||||
Sbjct: 36007458 gccgtcaccaagttcac 36007442
Score = 125 bits (63), Expect = 9e-026
Identities = 116/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2871182 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 2871241
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 2871242 cccgcggcggagaaggccgagaaggccccggccgggaagaagcccaaggcggagaagcgg 2871301
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2871302 ctccccgccggcaag 2871316
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2844126 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 2844067
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 2844066 cccgcggcagagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgt 2844007
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2844006 ctccccgccggcaag 2843992
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 2837513 gcatccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggag 2837454
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 2837453 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgc 2837394
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2837393 ctccccgccggcaag 2837379
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2673473 gcatccatggcgcccaaggcagagaagaagccggccgcgaagaagcccgcggaggaggag 2673532
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 2673533 cccgcggcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgt 2673592
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2673593 ctccccgccggcaag 2673607
Score = 115 bits (58), Expect = 9e-023
Identities = 116/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 2819702 gcatccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggag 2819643
Query: 1068 cccgcggccgagaaggc-------gccc--gccgggaagaagccgaaggcggagaagcgg 1118
|||||||| |||||||| |||| || ||||||||||| ||||||||||||||
Sbjct: 2819642 cccgcggcggagaaggccgagaaggccctggcggggaagaagcccaaggcggagaagcgt 2819583
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2819582 ctccccgccggcaag 2819568
Score = 109 bits (55), Expect = 5e-021
Identities = 114/135 (84%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 2857065 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 2857006
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 2857005 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgt 2856946
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 2856945 ctccccgccggcaag 2856931
Score = 81.8 bits (41), Expect = 1e-012
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 1012 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggag 1064
|||||||||||||||| |||||||||||||||| ||||||||||| |||||||
Sbjct: 36007853 cgatggcgcccaaggcggagaagaagcccgcggagaagaagccggtggaggag 36007801
Score = 54.0 bits (27), Expect = 3e-004
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 1012 cgatggcgcccaaggccgagaagaagcccgcggcgaagaagcc 1054
|||||||||||||||| ||||||||||| | || |||||||||
Sbjct: 17422125 cgatggcgcccaaggcagagaagaagccggtggagaagaagcc 17422083
Score = 50.1 bits (25), Expect = 0.004
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 1261 aggccatgtcgatcatgaactccttcattaacgatatcttcgagaagct 1309
|||||||||| |||||||| |||||||| ||||| | |||||||||||
Sbjct: 30942175 aggccatgtctatcatgaaatccttcatcaacgacgttttcgagaagct 30942127
Score = 48.1 bits (24), Expect = 0.017
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1200 tacaagatctacatcttcaaggtgctgaagca 1231
||||||||| ||||||||||||||| ||||||
Sbjct: 30476488 tacaagatcaacatcttcaaggtgcagaagca 30476519
Score = 46.1 bits (23), Expect = 0.068
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1197 acctacaagatctacatcttcaaggtg 1223
|||||| ||||||||||||||||||||
Sbjct: 20051313 acctacgagatctacatcttcaaggtg 20051339
Score = 46.1 bits (23), Expect = 0.068
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1199 ctacaagatctacatcttcaaggtgct 1225
|||||||||||| ||||||||||||||
Sbjct: 12269777 ctacaagatctatatcttcaaggtgct 12269803
Score = 46.1 bits (23), Expect = 0.068
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 262 acggcgccaccaacgccacgctcatcaacga 292
||||||||| |||||||| ||||||||||||
Sbjct: 7307695 acggcgccatcaacgccatgctcatcaacga 7307665
>ref|NM_184374.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 462
Score = 440 bits (222), Expect = e-120
Identities = 399/458 (87%), Gaps = 15/458 (3%)
Strand = Plus / Plus
Query: 1014 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgc- 1072
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 1 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgca 60
Query: 1073 --------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtcccc 1124
|||||||||||| ||||| ||||||||||| |||||||||||||| |||||
Sbjct: 61 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 120
Query: 1125 gctggcaagtccgctgccaaggagggcggcgagggcaagaggg---gcaggaagaagggc 1181
|| |||||| ||| |||| |||||||||| |||| || | ||||||||||
Sbjct: 121 gccggcaaggccgag---aagggcagcggcgaggggaagaaggcggggaggaagaaggcg 177
Query: 1182 aagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccg 1241
||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 178 aagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagcaggttcacccc 237
Query: 1242 gacattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttc 1301
||||| ||||||||||||||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 238 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttc 297
Query: 1302 gagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacc 1361
||||||||||| | ||| ||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 298 gagaagctcgccggagagtccgccaagctcgcccgctacaacaagaagcccaccatcacc 357
Query: 1362 tcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgcc 1421
||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 358 tcccgggagatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgcc 417
Query: 1422 gtctccgagggcaccaaggccgtcaccaagttcacctc 1459
||||| |||||||||||||||||||| || ||||||||
Sbjct: 418 gtctctgagggcaccaaggccgtcactaaattcacctc 455
>gb|AU097673.1|AU097673 AU097673 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30833, mRNA sequence
Length = 697
Score = 436 bits (220), Expect = e-119
Identities = 280/300 (93%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 190 aggaagaaggggaagaagagcgtggagacctacaagatctacatcttcaaggttctcaag 249
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 250 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 309
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 310 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 369
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 370 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctc 429
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 430 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggct 489
Score = 73.8 bits (37), Expect = 3e-010
Identities = 103/121 (85%), Gaps = 6/121 (4%)
Strand = Plus / Plus
Query: 1009 catcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagc 1068
|||| |||||||||||| | ||||||||||| |||||||||||||| || |||||||||
Sbjct: 27 catccatggcgcccaagncggagaagaagcc-gcggcgaagaagccc-cgaaggaggagc 84
Query: 1069 ccgcggccgagaaggcgcccgccg---ggaagaagccgaaggcggagaagcgggtccccg 1125
| |||| |||||||| || || | |||||||||| ||||||||||||||| ||||||
Sbjct: 85 cn-cggcggagaaggccccggcggcggggaagaagcccaaggcggagaagcggctccccg 143
Query: 1126 c 1126
|
Sbjct: 144 c 144
>gb|CB670863.1|CB670863 OSJNEe04C16.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04C16 3', mRNA sequence
Length = 729
Score = 436 bits (220), Expect = e-119
Identities = 406/468 (86%), Gaps = 15/468 (3%)
Strand = Plus / Minus
Query: 1014 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgc- 1072
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 640 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgca 581
Query: 1073 --------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtcccc 1124
|||||||||||| ||||| ||||||||||| |||||||||||||| |||||
Sbjct: 580 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 521
Query: 1125 gctggcaagtccgctgccaaggagggcggcgagggcaagaggg---gcaggaagaagggc 1181
|| |||||| ||| |||| |||||||||| |||| || | ||||||||||
Sbjct: 520 gccggcaaggccgag---aagggcagcggcgaggggaagaaggcggggaggaagaaggcg 464
Query: 1182 aagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccg 1241
||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 463 aagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagcaggttcacccc 404
Query: 1242 gacattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttc 1301
||||| ||||||||||||||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 403 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttc 344
Query: 1302 gagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacc 1361
||||||||||| | ||| ||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 343 gagaagctcgccggagagtccgccaagctcgcccgctacaacaagaagcccaccatcacc 284
Query: 1362 tcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgcc 1421
||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 283 tcccgggagatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgcc 224
Query: 1422 gtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||| |||||||||||||||||||| || |||||||| || ||||||
Sbjct: 223 gtctttgagggcaccaaggccgtcactaaattcacctccgcttaggct 176
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08,
complete sequence
Length = 119500
Score = 436 bits (220), Expect = e-119
Identities = 280/300 (93%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 26793 aggaagaaggggaagaagagcgtggagacctacaagatctacatcttcaaggttctcaag 26852
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 26853 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 26912
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 26913 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 26972
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 26973 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctc 27032
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 27033 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggct 27092
Score = 133 bits (67), Expect = 4e-028
Identities = 108/121 (89%), Gaps = 3/121 (2%)
Strand = Plus / Plus
Query: 1009 catcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagc 1068
|||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 26626 catccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagc 26685
Query: 1069 ccgcggccgagaagg---cgcccgccgggaagaagccgaaggcggagaagcgggtccccg 1125
||||||| ||||||| || | || ||||||||||| ||||||||||||||| ||||||
Sbjct: 26686 ccgcggcggagaaggccccggcggcggggaagaagcccaaggcggagaagcggctccccg 26745
Query: 1126 c 1126
|
Sbjct: 26746 c 26746
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10,
complete sequence
Length = 187034
Score = 436 bits (220), Expect = e-119
Identities = 280/300 (93%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 176111 aggaagaaggggaagaagagcgtggagacctacaagatctacatcttcaaggttctcaag 176170
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 176171 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 176230
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 176231 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 176290
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 176291 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctc 176350
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 176351 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggct 176410
Score = 133 bits (67), Expect = 4e-028
Identities = 108/121 (89%), Gaps = 3/121 (2%)
Strand = Plus / Plus
Query: 1009 catcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagc 1068
|||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 175944 catccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagc 176003
Query: 1069 ccgcggccgagaagg---cgcccgccgggaagaagccgaaggcggagaagcgggtccccg 1125
||||||| ||||||| || | || ||||||||||| ||||||||||||||| ||||||
Sbjct: 176004 ccgcggcggagaaggccccggcggcggggaagaagcccaaggcggagaagcggctccccg 176063
Query: 1126 c 1126
|
Sbjct: 176064 c 176064
>gb|AACV01012743.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012743, whole
genome shotgun sequence
Length = 27501
Score = 436 bits (220), Expect = e-119
Identities = 280/300 (93%)
Strand = Plus / Minus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 20283 aggaagaaggggaagaagagcgtggagacctacaagatctacatcttcaaggttctcaag 20224
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 20223 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 20164
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 20163 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 20104
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 20103 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctc 20044
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 20043 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggct 19984
Score = 133 bits (67), Expect = 4e-028
Identities = 108/121 (89%), Gaps = 3/121 (2%)
Strand = Plus / Minus
Query: 1009 catcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagc 1068
|||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 20450 catccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagc 20391
Query: 1069 ccgcggccgagaagg---cgcccgccgggaagaagccgaaggcggagaagcgggtccccg 1125
||||||| ||||||| || | || ||||||||||| ||||||||||||||| ||||||
Sbjct: 20390 ccgcggcggagaaggccccggcggcggggaagaagcccaaggcggagaagcggctccccg 20331
Query: 1126 c 1126
|
Sbjct: 20330 c 20330
>ref|NT_107222.1| Oryza sativa (japonica cultivar-group)
Length = 1298239
Score = 436 bits (220), Expect = e-119
Identities = 280/300 (93%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 26793 aggaagaaggggaagaagagcgtggagacctacaagatctacatcttcaaggttctcaag 26852
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 26853 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 26912
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 26913 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 26972
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 26973 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctc 27032
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 27033 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggct 27092
Score = 133 bits (67), Expect = 4e-028
Identities = 108/121 (89%), Gaps = 3/121 (2%)
Strand = Plus / Plus
Query: 1009 catcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagc 1068
|||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 26626 catccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagc 26685
Query: 1069 ccgcggccgagaagg---cgcccgccgggaagaagccgaaggcggagaagcgggtccccg 1125
||||||| ||||||| || | || ||||||||||| ||||||||||||||| ||||||
Sbjct: 26686 ccgcggcggagaaggccccggcggcggggaagaagcccaaggcggagaagcggctccccg 26745
Query: 1126 c 1126
|
Sbjct: 26746 c 26746
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 436 bits (220), Expect = e-119
Identities = 280/300 (93%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 10826942 aggaagaaggggaagaagagcgtggagacctacaagatctacatcttcaaggttctcaag 10827001
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 10827002 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 10827061
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 10827062 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 10827121
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 10827122 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctc 10827181
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 10827182 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggct 10827241
Score = 278 bits (140), Expect = 1e-071
Identities = 251/288 (87%)
Strand = Plus / Plus
Query: 1172 gaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagca 1231
|||||||| ||||| |||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 4860719 gaagaaggcgaagaaaagcgtggagacctataaaatctacatcttcaaggtgctcaagca 4860778
Query: 1232 ggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcattaa 1291
|||||| || ||||| || |||||||||||||||||||| |||||||| |||||| | ||
Sbjct: 4860779 ggtgcatccagacataggaatctcctccaaggccatgtccatcatgaattccttcgtcaa 4860838
Query: 1292 cgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcc 1351
||| || ||||||||||||| |||||||| | ||| || | || |||||||||||
Sbjct: 4860839 cgacattttcgagaagctcgagcaggaggccgcgaggcttgccaggtacaacaagaagcc 4860898
Query: 1352 taccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgc 1411
|| ||||||||||| |||||||||||||| || || |||||||| ||||| ||||| ||
Sbjct: 4860899 cacaatcacctcccgcgagatccagacctctgttcgtctcgtcctccccggcgagcttgc 4860958
Query: 1412 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctc 1459
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4860959 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctc 4861006
Score = 133 bits (67), Expect = 4e-028
Identities = 108/121 (89%), Gaps = 3/121 (2%)
Strand = Plus / Plus
Query: 1009 catcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagc 1068
|||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 10826775 catccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagc 10826834
Query: 1069 ccgcggccgagaagg---cgcccgccgggaagaagccgaaggcggagaagcgggtccccg 1125
||||||| ||||||| || | || ||||||||||| ||||||||||||||| ||||||
Sbjct: 10826835 ccgcggcggagaaggccccggcggcggggaagaagcccaaggcggagaagcggctccccg 10826894
Query: 1126 c 1126
|
Sbjct: 10826895 c 10826895
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1195 agacctacaagatctacatcttcaaggtg 1223
||||| |||||||||||||||||||||||
Sbjct: 7877625 agaccaacaagatctacatcttcaaggtg 7877597
Score = 48.1 bits (24), Expect = 0.017
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1284 ttcattaacgatatcttcgagaagctcg 1311
||||||||||| ||||||||||||||||
Sbjct: 849332 ttcattaacgacatcttcgagaagctcg 849359
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 436 bits (220), Expect = e-119
Identities = 280/300 (93%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 28127255 aggaagaaggggaagaagagcgtggagacctacaagatctacatcttcaaggttctcaag 28127314
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 28127315 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 28127374
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 28127375 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 28127434
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 28127435 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctc 28127494
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 28127495 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggct 28127554
Score = 278 bits (140), Expect = 1e-071
Identities = 251/288 (87%)
Strand = Plus / Plus
Query: 1172 gaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagca 1231
|||||||| ||||| |||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 22161032 gaagaaggcgaagaaaagcgtggagacctataaaatctacatcttcaaggtgctcaagca 22161091
Query: 1232 ggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcattaa 1291
|||||| || ||||| || |||||||||||||||||||| |||||||| |||||| | ||
Sbjct: 22161092 ggtgcatccagacataggaatctcctccaaggccatgtccatcatgaattccttcgtcaa 22161151
Query: 1292 cgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcc 1351
||| || ||||||||||||| |||||||| | ||| || | || |||||||||||
Sbjct: 22161152 cgacattttcgagaagctcgagcaggaggccgcgaggcttgccaggtacaacaagaagcc 22161211
Query: 1352 taccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgc 1411
|| ||||||||||| |||||||||||||| || || |||||||| ||||| ||||| ||
Sbjct: 22161212 cacaatcacctcccgcgagatccagacctctgttcgtctcgtcctccccggcgagcttgc 22161271
Query: 1412 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctc 1459
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22161272 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctc 22161319
Score = 133 bits (67), Expect = 4e-028
Identities = 108/121 (89%), Gaps = 3/121 (2%)
Strand = Plus / Plus
Query: 1009 catcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagc 1068
|||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 28127088 catccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagc 28127147
Query: 1069 ccgcggccgagaagg---cgcccgccgggaagaagccgaaggcggagaagcgggtccccg 1125
||||||| ||||||| || | || ||||||||||| ||||||||||||||| ||||||
Sbjct: 28127148 ccgcggcggagaaggccccggcggcggggaagaagcccaaggcggagaagcggctccccg 28127207
Query: 1126 c 1126
|
Sbjct: 28127208 c 28127208
Score = 73.8 bits (37), Expect = 3e-010
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 1181 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcagg 1233
||||||||| ||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 6814365 caagaagagtatggagacctacaatatctacatcttcaaggtgcagaagcagg 6814313
Score = 60.0 bits (30), Expect = 4e-006
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 37 gcctcctcgtcgccgcggcctccctcgccgtcgc 70
||||||||||||||||||||||||||||| ||||
Sbjct: 6004464 gcctcctcgtcgccgcggcctccctcgccttcgc 6004431
Score = 56.0 bits (28), Expect = 7e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 1272 atcatgaactccttcattaacgatatcttcgagaagctcg 1311
||||||||||||||| ||| |||||||||| |||||||||
Sbjct: 6808020 atcatgaactccttctttatcgatatcttcaagaagctcg 6807981
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1195 agacctacaagatctacatcttcaaggtg 1223
||||| |||||||||||||||||||||||
Sbjct: 25177938 agaccaacaagatctacatcttcaaggtg 25177910
Score = 48.1 bits (24), Expect = 0.017
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1284 ttcattaacgatatcttcgagaagctcg 1311
||||||||||| ||||||||||||||||
Sbjct: 18149645 ttcattaacgacatcttcgagaagctcg 18149672
Score = 48.1 bits (24), Expect = 0.017
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 1191 gtggagacctacaagatctacatcttcaaggt 1222
||||||||||||||||| ||||| ||||||||
Sbjct: 8223478 gtggagacctacaagatttacatattcaaggt 8223447
Score = 46.1 bits (23), Expect = 0.068
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1272 atcatgaactccttcattaacgatatcttcgagaa 1306
||||||||||||||||| || || |||||||||||
Sbjct: 8223398 atcatgaactccttcatcaatgacatcttcgagaa 8223364
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 436 bits (220), Expect = e-119
Identities = 280/300 (93%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 28391869 aggaagaaggggaagaagagcgtggagacctacaagatctacatcttcaaggttctcaag 28391928
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 28391929 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 28391988
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 28391989 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 28392048
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 28392049 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctc 28392108
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 28392109 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggct 28392168
Score = 278 bits (140), Expect = 1e-071
Identities = 251/288 (87%)
Strand = Plus / Plus
Query: 1172 gaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagca 1231
|||||||| ||||| |||||||||||||| || |||||||||||||||||||| |||||
Sbjct: 22480177 gaagaaggcgaagaaaagcgtggagacctataaaatctacatcttcaaggtgctcaagca 22480236
Query: 1232 ggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcattaa 1291
|||||| || ||||| || |||||||||||||||||||| |||||||| |||||| | ||
Sbjct: 22480237 ggtgcatccagacataggaatctcctccaaggccatgtccatcatgaattccttcgtcaa 22480296
Query: 1292 cgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcc 1351
||| || ||||||||||||| |||||||| | ||| || | || |||||||||||
Sbjct: 22480297 cgacattttcgagaagctcgagcaggaggccgcgaggcttgccaggtacaacaagaagcc 22480356
Query: 1352 taccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgc 1411
|| ||||||||||| |||||||||||||| || || |||||||| ||||| ||||| ||
Sbjct: 22480357 cacaatcacctcccgcgagatccagacctctgttcgtctcgtcctccccggcgagcttgc 22480416
Query: 1412 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctc 1459
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22480417 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctc 22480464
Score = 133 bits (67), Expect = 4e-028
Identities = 108/121 (89%), Gaps = 3/121 (2%)
Strand = Plus / Plus
Query: 1009 catcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagc 1068
|||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 28391702 catccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagc 28391761
Query: 1069 ccgcggccgagaagg---cgcccgccgggaagaagccgaaggcggagaagcgggtccccg 1125
||||||| ||||||| || | || ||||||||||| ||||||||||||||| ||||||
Sbjct: 28391762 ccgcggcggagaaggccccggcggcggggaagaagcccaaggcggagaagcggctccccg 28391821
Query: 1126 c 1126
|
Sbjct: 28391822 c 28391822
Score = 73.8 bits (37), Expect = 3e-010
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 1181 caagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcagg 1233
||||||||| ||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 6896207 caagaagagtatggagacctacaatatctacatcttcaaggtgcagaagcagg 6896155
Score = 60.0 bits (30), Expect = 4e-006
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 37 gcctcctcgtcgccgcggcctccctcgccgtcgc 70
||||||||||||||||||||||||||||| ||||
Sbjct: 6113872 gcctcctcgtcgccgcggcctccctcgccttcgc 6113839
Score = 56.0 bits (28), Expect = 7e-005
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 1272 atcatgaactccttcattaacgatatcttcgagaagctcg 1311
||||||||||||||| ||| |||||||||| |||||||||
Sbjct: 6889862 atcatgaactccttctttatcgatatcttcaagaagctcg 6889823
Score = 50.1 bits (25), Expect = 0.004
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 1195 agacctacaagatctacatcttcaaggtg 1223
||||| |||||||||||||||||||||||
Sbjct: 25447139 agaccaacaagatctacatcttcaaggtg 25447111
Score = 48.1 bits (24), Expect = 0.017
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1284 ttcattaacgatatcttcgagaagctcg 1311
||||||||||| ||||||||||||||||
Sbjct: 18422063 ttcattaacgacatcttcgagaagctcg 18422090
>gb|CO436072.1|CO436072 OsMR994 5MT resistant rice mutant cDNA library Oryza sativa (japonica
cultivar-group) cDNA, mRNA sequence
Length = 885
Score = 432 bits (218), Expect = e-118
Identities = 272/290 (93%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 274 aggaagaaggggaagaagagcgtggagacctacaagatctacatcttcaaggttctcaag 333
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 334 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 393
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 394 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 453
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 454 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctc 513
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctc 1459
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctc 563
Score = 133 bits (67), Expect = 4e-028
Identities = 108/121 (89%), Gaps = 3/121 (2%)
Strand = Plus / Plus
Query: 1009 catcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagc 1068
|||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 107 catccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagc 166
Query: 1069 ccgcggccgagaagg---cgcccgccgggaagaagccgaaggcggagaagcgggtccccg 1125
||||||| ||||||| || | || ||||||||||| ||||||||||||||| ||||||
Sbjct: 167 ccgcggcggagaaggccccggcggcggggaagaagcccaaggcggagaagcggctccccg 226
Query: 1126 c 1126
|
Sbjct: 227 c 227
>ref|XM_475912.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 459
Score = 432 bits (218), Expect = e-118
Identities = 272/290 (93%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 163 aggaagaaggggaagaagagcgtggagacctacaagatctacatcttcaaggttctcaag 222
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 223 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 282
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 283 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 342
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 343 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctc 402
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctc 1459
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctc 452
Score = 131 bits (66), Expect = 1e-027
Identities = 104/116 (89%), Gaps = 3/116 (2%)
Strand = Plus / Plus
Query: 1014 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 1073
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 1 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 60
Query: 1074 gccgagaagg---cgcccgccgggaagaagccgaaggcggagaagcgggtccccgc 1126
|| ||||||| || | || ||||||||||| ||||||||||||||| |||||||
Sbjct: 61 gcggagaaggccccggcggcggggaagaagcccaaggcggagaagcggctccccgc 116
>gb|AU032007.1|AU032007 AU032007 Rice root Oryza sativa (japonica cultivar-group) cDNA clone
R3125_8Z, mRNA sequence
Length = 581
Score = 424 bits (214), Expect = e-116
Identities = 278/300 (92%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
||||||||||| ||||||| | ||||||||||||||||||||||||||||||| || |||
Sbjct: 77 aggaagaaggggaagaagancntggagacctacaagatctacatcttcaaggttctcaag 136
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 137 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 196
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 197 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 256
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 257 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctc 316
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 317 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggct 376
Score = 44.1 bits (22), Expect = 0.27
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1097 gaagccgaaggcggagaagcgggtccccgc 1126
|||||| ||||||||||||||| |||||||
Sbjct: 1 gaagcccaaggcggagaagcggctccccgc 30
>gb|CF307934.1|CF307934 ABF--01-I21.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group) cDNA
clone ABF--01-I21, mRNA sequence
Length = 504
Score = 420 bits (212), Expect = e-114
Identities = 269/288 (93%)
Strand = Plus / Plus
Query: 1182 aagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccg 1241
||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 41 aagaagagcgtggagacctacaagatctacatcttcaaggttctcaagcaggtccacccc 100
Query: 1242 gacattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttc 1301
||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||
Sbjct: 101 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttc 160
Query: 1302 gagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacc 1361
||||||||||| || ||||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 161 gagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcccaccatcacc 220
Query: 1362 tcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgcc 1421
||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 221 tcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgcc 280
Query: 1422 gtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 281 gtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggct 328
>gb|CA755827.1|CA755827 BR030029000_PLATE_B12_90_096.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030029000_PLATE_B12_90_096.ab1 similar to putative
histone H2B [Oryza sativa (japonica cultivar-group)],
mRNA sequence
Length = 636
Score = 418 bits (211), Expect = e-114
Identities = 277/300 (92%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
||||||||||| ||||||||||||||||||||| ||||||||||||||||||| || |||
Sbjct: 204 aggaagaaggggaagaagagcgtggagacctacnagatctacatcttcaaggttctcaag 263
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 264 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 323
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||| ||||||| ||||| |||||||||
Sbjct: 324 aacgacatcttcgagaagctcgccgccgaggccgccnagctcgcccgctacaacaagaag 383
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct: 384 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctc 443
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 444 gccnagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggct 503
Score = 133 bits (67), Expect = 4e-028
Identities = 108/121 (89%), Gaps = 3/121 (2%)
Strand = Plus / Plus
Query: 1009 catcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagc 1068
|||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||
Sbjct: 37 catccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagc 96
Query: 1069 ccgcggccgagaagg---cgcccgccgggaagaagccgaaggcggagaagcgggtccccg 1125
||||||| ||||||| || | || ||||||||||| ||||||||||||||| ||||||
Sbjct: 97 ccgcggcggagaaggccccggcggcggggaagaagcccaaggcggagaagcggctccccg 156
Query: 1126 c 1126
|
Sbjct: 157 c 157
>gb|CA998897.1|CA998897 S345N_D05 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 460
Score = 418 bits (211), Expect = e-114
Identities = 268/287 (93%)
Strand = Plus / Plus
Query: 1183 agaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 1242
|||||||||||||||||||||||||||||||||||||||| || |||||||| ||||| |
Sbjct: 1 agaagagcgtggagacctacaagatctacatcttcaaggttctcaagcaggtccaccccg 60
Query: 1243 acattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttcg 1302
|||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||
Sbjct: 61 acatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 120
Query: 1303 agaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacct 1362
|||||||||| || ||||||||||||||||| ||||| ||||||||||| ||||||||||
Sbjct: 121 agaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcccaccatcacct 180
Query: 1363 cccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgccg 1422
|||| ||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||
Sbjct: 181 cccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgccg 240
Query: 1423 tctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 241 tctccgagggcaccaaggccgtcaccaagttcacctccgcttaggct 287
>gb|CB662156.1|CB662156 OSJNEd05O18.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05O18 5', mRNA sequence
Length = 702
Score = 408 bits (206), Expect = e-111
Identities = 266/286 (93%)
Strand = Plus / Plus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 215 ggaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 274
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 275 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 334
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 335 acgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagc 394
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| ||||| |
Sbjct: 395 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttg 454
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 1456
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 500
Score = 109 bits (55), Expect = 5e-021
Identities = 114/135 (84%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 43 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 102
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 103 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgt 162
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 163 ctccccgccggcaag 177
>gb|CB662157.1|CB662157 OSJNEd05O18.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05O18 3', mRNA sequence
Length = 827
Score = 408 bits (206), Expect = e-111
Identities = 266/286 (93%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 540 ggaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 481
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 480 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 421
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 420 acgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagc 361
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| ||||| |
Sbjct: 360 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttg 301
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 1456
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 255
Score = 109 bits (55), Expect = 5e-021
Identities = 114/135 (84%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 712 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 653
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 652 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgt 593
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 592 ctccccgccggcaag 578
>gb|CF278594.1|CF278594 14ETL--04-I24.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--04-I24, mRNA sequence
Length = 567
Score = 408 bits (206), Expect = e-111
Identities = 266/286 (93%)
Strand = Plus / Plus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 240 ggaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 299
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 300 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 359
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 360 acgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagc 419
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| ||||| |
Sbjct: 420 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttg 479
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 1456
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 525
Score = 109 bits (55), Expect = 5e-021
Identities = 114/135 (84%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 68 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 127
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 128 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgt 187
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 188 ctccccgccggcaag 202
>gb|CF292148.1|CF292148 14ROOT--02-N19.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-N19, mRNA sequence
Length = 549
Score = 408 bits (206), Expect = e-111
Identities = 266/286 (93%)
Strand = Plus / Plus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 258 ggaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 317
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 318 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 377
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 378 acgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagc 437
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| ||||| |
Sbjct: 438 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttg 497
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 1456
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 543
Score = 109 bits (55), Expect = 5e-021
Identities = 114/135 (84%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 86 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 145
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 146 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgt 205
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 206 ctccccgccggcaag 220
>gb|CF292227.1|CF292227 14ROOT--02-P16.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-P16, mRNA sequence
Length = 623
Score = 408 bits (206), Expect = e-111
Identities = 266/286 (93%)
Strand = Plus / Plus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 249 ggaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 308
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 309 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 368
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 369 acgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagc 428
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| ||||| |
Sbjct: 429 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttg 488
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 1456
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 534
Score = 109 bits (55), Expect = 5e-021
Identities = 114/135 (84%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 77 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 136
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 137 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgt 196
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 197 ctccccgccggcaag 211
>gb|CF333473.1|CF333473 JMT--02-G04.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group) cDNA
clone JMT--02-G04, mRNA sequence
Length = 610
Score = 408 bits (206), Expect = e-111
Identities = 266/286 (93%)
Strand = Plus / Plus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 259 ggaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 318
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 319 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 378
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 379 acgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagc 438
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| ||||| |
Sbjct: 439 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttg 498
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 1456
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 544
Score = 109 bits (55), Expect = 5e-021
Identities = 114/135 (84%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 87 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 146
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 147 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgt 206
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 207 ctccccgccggcaag 221
>gb|CV731987.1|CV731987 FLO--06-E06.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--06-E06,
mRNA sequence
Length = 493
Score = 408 bits (206), Expect = e-111
Identities = 266/286 (93%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 493 ggaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 434
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 433 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 374
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 373 acgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagc 314
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| ||||| |
Sbjct: 313 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttg 254
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 1456
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 208
>dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0009G03
Length = 163526
Score = 408 bits (206), Expect = e-111
Identities = 266/286 (93%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 162570 ggaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 162511
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 162510 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 162451
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 162450 acgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagc 162391
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| ||||| |
Sbjct: 162390 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttg 162331
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 1456
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162330 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 162285
Score = 396 bits (200), Expect = e-107
Identities = 275/300 (91%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 143018 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 142959
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 142958 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 142899
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
| |||||||||||||||||||| | ||| ||||||||||||||||||| ||||||||||
Sbjct: 142898 atgatatcttcgagaagctcgccggagagtccgccaagctcgcgcgctacaacaagaagc 142839
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| |||||||
Sbjct: 142838 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagctcg 142779
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggctg 1470
|||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 142778 ccaagcacgccgtctccgagggcaccaaggccgttaccaagttcacttcctcctaggctg 142719
Score = 391 bits (197), Expect = e-105
Identities = 275/301 (91%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 149631 ggaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 149572
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 149571 aggttcaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 149512
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 149511 acgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagc 149452
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| ||||| ||||||||||| ||||||||||| ||||| |||||||
Sbjct: 149451 ccaccatcacctcccgggagattcagacctccgtccgcctcgtcctccccggcgagctcg 149392
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggctg 1470
||||||||||||||||||||||||| ||||||||||||||||| || || || |||||||
Sbjct: 149391 ccaagcacgccgtctccgagggcacgaaggccgtcaccaagtttacttccgcttaggctg 149332
Query: 1471 c 1471
|
Sbjct: 149331 c 149331
Score = 391 bits (197), Expect = e-105
Identities = 266/289 (92%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 125207 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 125148
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 125147 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 125088
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| | ||| ||||||||||||||||||| ||||||||||
Sbjct: 125087 acgacatcttcgagaagctcgccggggagtccgccaagctcgcgcgctacaacaagaagc 125028
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| ||||||||||| || ||||||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 125027 ccaccatcacctcacgggagatccagacctccgtccgcctcgtcctccccggcgagctcg 124968
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctc 1459
||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 124967 ccaagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctc 124919
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 149803 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 149744
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 149743 cccgcggcagagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgt 149684
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 149683 ctccccgccggcaag 149669
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 143190 gcatccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggag 143131
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 143130 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgc 143071
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 143070 ctccccgccggcaag 143056
Score = 115 bits (58), Expect = 9e-023
Identities = 116/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 125379 gcatccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggag 125320
Query: 1068 cccgcggccgagaaggc-------gccc--gccgggaagaagccgaaggcggagaagcgg 1118
|||||||| |||||||| |||| || ||||||||||| ||||||||||||||
Sbjct: 125319 cccgcggcggagaaggccgagaaggccctggcggggaagaagcccaaggcggagaagcgt 125260
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 125259 ctccccgccggcaag 125245
Score = 109 bits (55), Expect = 5e-021
Identities = 114/135 (84%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 162742 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 162683
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 162682 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgt 162623
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 162622 ctccccgccggcaag 162608
>dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0030H07
Length = 168253
Score = 408 bits (206), Expect = e-111
Identities = 266/286 (93%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 63891 ggaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 63832
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 63831 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 63772
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 63771 acgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagc 63712
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| ||||| |
Sbjct: 63711 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttg 63652
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 1456
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63651 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 63606
Score = 404 bits (204), Expect = e-110
Identities = 276/300 (92%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 78357 aggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaag 78416
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 78417 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 78476
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 78477 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 78536
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 78537 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctt 78596
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||| || |||||||||||||| || ||||||
Sbjct: 78597 gccaagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctccgcttaggct 78656
Score = 396 bits (200), Expect = e-107
Identities = 275/300 (91%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 44339 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 44280
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 44279 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 44220
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
| |||||||||||||||||||| | ||| ||||||||||||||||||| ||||||||||
Sbjct: 44219 atgatatcttcgagaagctcgccggagagtccgccaagctcgcgcgctacaacaagaagc 44160
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| |||||||
Sbjct: 44159 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagctcg 44100
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggctg 1470
|||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 44099 ccaagcacgccgtctccgagggcaccaaggccgttaccaagttcacttcctcctaggctg 44040
Score = 391 bits (197), Expect = e-105
Identities = 275/301 (91%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 50952 ggaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 50893
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 50892 aggttcaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 50833
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| | ||| ||||||||||||| ||||| ||||||||||
Sbjct: 50832 acgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagc 50773
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| ||||| ||||||||||| ||||||||||| ||||| |||||||
Sbjct: 50772 ccaccatcacctcccgggagattcagacctccgtccgcctcgtcctccccggcgagctcg 50713
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggctg 1470
||||||||||||||||||||||||| ||||||||||||||||| || || || |||||||
Sbjct: 50712 ccaagcacgccgtctccgagggcacgaaggccgtcaccaagtttacttccgcttaggctg 50653
Query: 1471 c 1471
|
Sbjct: 50652 c 50652
Score = 391 bits (197), Expect = e-105
Identities = 266/289 (92%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 26528 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 26469
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 26468 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 26409
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| | ||| ||||||||||||||||||| ||||||||||
Sbjct: 26408 acgacatcttcgagaagctcgccggggagtccgccaagctcgcgcgctacaacaagaagc 26349
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| ||||||||||| || ||||||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 26348 ccaccatcacctcacgggagatccagacctccgtccgcctcgtcctccccggcgagctcg 26289
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctc 1459
||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 26288 ccaagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctc 26240
Score = 125 bits (63), Expect = 9e-026
Identities = 116/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 78180 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 78239
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 78240 cccgcggcggagaaggccgagaaggccccggccgggaagaagcccaaggcggagaagcgg 78299
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 78300 ctccccgccggcaag 78314
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 51124 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 51065
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 51064 cccgcggcagagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgt 51005
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 51004 ctccccgccggcaag 50990
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 44511 gcatccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggag 44452
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 44451 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgc 44392
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 44391 ctccccgccggcaag 44377
Score = 115 bits (58), Expect = 9e-023
Identities = 116/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 26700 gcatccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggag 26641
Query: 1068 cccgcggccgagaaggc-------gccc--gccgggaagaagccgaaggcggagaagcgg 1118
|||||||| |||||||| |||| || ||||||||||| ||||||||||||||
Sbjct: 26640 cccgcggcggagaaggccgagaaggccctggcggggaagaagcccaaggcggagaagcgt 26581
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 26580 ctccccgccggcaag 26566
Score = 109 bits (55), Expect = 5e-021
Identities = 114/135 (84%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 64063 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 64004
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 64003 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgt 63944
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 63943 ctccccgccggcaag 63929
>gb|AACV01000215.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000215, whole
genome shotgun sequence
Length = 50442
Score = 408 bits (206), Expect = e-111
Identities = 266/286 (93%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 13017 ggaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 12958
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 12957 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 12898
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 12897 acgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagc 12838
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| ||||| |
Sbjct: 12837 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttg 12778
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 1456
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12777 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 12732
Score = 404 bits (204), Expect = e-110
Identities = 276/300 (92%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 27483 aggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaag 27542
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 27543 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 27602
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 27603 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 27662
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 27663 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctt 27722
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||| || |||||||||||||| || ||||||
Sbjct: 27723 gccaagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctccgcttaggct 27782
Score = 125 bits (63), Expect = 9e-026
Identities = 116/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 27306 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 27365
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 27366 cccgcggcggagaaggccgagaaggccccggccgggaagaagcccaaggcggagaagcgg 27425
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 27426 ctccccgccggcaag 27440
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 247 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 188
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 187 cccgcggcagagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgt 128
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 127 ctccccgccggcaag 113
Score = 109 bits (55), Expect = 5e-021
Identities = 114/135 (84%), Gaps = 9/135 (6%)
Strand = Plus / Minus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 13189 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 13130
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 13129 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgt 13070
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 13069 ctccccgccggcaag 13055
Score = 91.7 bits (46), Expect = 1e-015
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 75 ggaagaaggggaacaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 16
Query: 1231 ag 1232
||
Sbjct: 15 ag 14
>ref|NM_184407.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 462
Score = 408 bits (206), Expect = e-111
Identities = 266/286 (93%)
Strand = Plus / Plus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 167 ggaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 226
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 227 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 286
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 287 acgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagc 346
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| ||||| |
Sbjct: 347 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttg 406
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 1456
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 452
Score = 105 bits (53), Expect = 8e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 1014 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgc- 1072
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 1 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 60
Query: 1073 --------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtcccc 1124
|||||||||||| || || ||||||||||| |||||||||||||| |||||
Sbjct: 61 gcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgtctcccc 120
Query: 1125 gctggcaag 1133
|| ||||||
Sbjct: 121 gccggcaag 129
>gb|CA998848.1|CA998848 S345M_G12 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 564
Score = 404 bits (204), Expect = e-110
Identities = 276/300 (92%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 53 aggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaag 112
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 113 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 172
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 173 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 232
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 233 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctt 292
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||| || |||||||||||||| || ||||||
Sbjct: 293 gccaagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctccgcttaggct 352
>gb|BP184585.1|BP184585 BP184585 pNS rice panicle cDNA, flowering stage Oryza sativa
(japonica cultivar-group) cDNA clone 13YPG059, mRNA
sequence
Length = 626
Score = 404 bits (204), Expect = e-110
Identities = 276/300 (92%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 235 aggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaag 294
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 295 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 354
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 355 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 414
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 415 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctt 474
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||| || |||||||||||||| || ||||||
Sbjct: 475 gccaagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctccgcttaggct 534
Score = 125 bits (63), Expect = 9e-026
Identities = 116/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 58 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 117
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 118 cccgcggcggagaaggccgagaaggccccggccgggaagaagcccaaggcggagaagcgg 177
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 178 ctccccgccggcaag 192
>gb|BP184926.1|BP184926 BP184926 pNS rice callus cDNA Oryza sativa (japonica cultivar-group)
cDNA clone 23C4AG024, mRNA sequence
Length = 663
Score = 404 bits (204), Expect = e-110
Identities = 276/300 (92%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 247 aggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaag 306
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 307 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 366
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 367 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 426
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 427 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctt 486
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggct 1469
|||||||||||||||||||||||||||||||| || |||||||||||||| || ||||||
Sbjct: 487 gccaagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctccgcttaggct 546
Score = 125 bits (63), Expect = 9e-026
Identities = 116/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 70 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 129
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 130 cccgcggcggagaaggccgagaaggccccggccgggaagaagcccaaggcggagaagcgg 189
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 190 ctccccgccggcaag 204
>gb|AU031294.1|AU031294 AU031294 Rice cDNA from immature leaf including apical meristem Oryza
sativa (japonica cultivar-group) cDNA clone E61302_2Z,
mRNA sequence
Length = 618
Score = 400 bits (202), Expect = e-108
Identities = 279/302 (92%), Gaps = 2/302 (0%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtg-ctgaa 1228
||||||||||| ||||||||| ||||||||||||||||||||||||||||||| || ||
Sbjct: 123 aggaagaaggggaagaagagcttggagacctacaagatctacatcttcaaggtttctcaa 182
Query: 1229 gcaggtgcacccggacattggcatctcctcc-aaggccatgtcgatcatgaactccttca 1287
|||||| ||||| ||||| |||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 183 gcaggtccaccccgacatcggcatctcctcccaaggccatgtccatcatgaactccttca 242
Query: 1288 ttaacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaaga 1347
| ||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||
Sbjct: 243 tcaacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaaga 302
Query: 1348 agcctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagc 1407
|||| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 303 agcccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagc 362
Query: 1408 tcgccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctagg 1467
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 363 tcgccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttagg 422
Query: 1468 ct 1469
||
Sbjct: 423 ct 424
>gb|AU070936.1|AU070936 AU070936 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10485_1A, mRNA sequence
Length = 712
Score = 400 bits (202), Expect = e-108
Identities = 268/290 (92%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 238 aggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaag 297
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 298 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 357
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 358 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 417
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 418 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctt 477
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctc 1459
|||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 478 gccaagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctc 527
Score = 121 bits (61), Expect = 1e-024
Identities = 116/136 (85%), Gaps = 10/136 (7%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 60 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 119
Query: 1068 cccgc----------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcg 1117
||||| |||||||||||| || |||||||||||||| ||||||||||||||
Sbjct: 120 cccgcggcggnagaaggccgagaaggccccggccgggaagaagcccaaggcggagaagcg 179
Query: 1118 ggtccccgctggcaag 1133
| ||||||| ||||||
Sbjct: 180 gctccccgccggcaag 195
>gb|CF291163.1|CF291163 14ROOT--01-H18.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-H18, mRNA sequence
Length = 532
Score = 400 bits (202), Expect = e-108
Identities = 265/286 (92%)
Strand = Plus / Plus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||
Sbjct: 241 ggaagaaggggaagaagagcgtcgagacttacaagatctacatcttcaaggtgctcaagc 300
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 301 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 360
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 361 acgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagc 420
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| ||||| |
Sbjct: 421 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttg 480
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 1456
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 526
Score = 109 bits (55), Expect = 5e-021
Identities = 114/135 (84%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 69 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 128
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 129 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgt 188
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 189 ctccccgccggcaag 203
>gb|CF291164.1|CF291164 14ROOT--01-H18.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-H18, mRNA sequence
Length = 594
Score = 400 bits (202), Expect = e-108
Identities = 265/286 (92%)
Strand = Plus / Minus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||
Sbjct: 495 ggaagaaggggaagaagagcgtcgagacttacaagatctacatcttcaaggtgctcaagc 436
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 435 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 376
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 375 acgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagc 316
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| ||||| |
Sbjct: 315 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttg 256
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 1456
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 210
Score = 65.9 bits (33), Expect = 7e-008
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 1073 ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtccccgctggcaa 1132
|||||||||||| || || ||||||||||| |||||||||||||| ||||||| |||||
Sbjct: 593 ggccgagaaggccccggcggggaagaagcccaaggcggagaagcgtctccccgccggcaa 534
Query: 1133 g 1133
|
Sbjct: 533 g 533
>gb|CF292040.1|CF292040 14ROOT--02-L10.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-L10, mRNA sequence
Length = 624
Score = 400 bits (202), Expect = e-108
Identities = 265/286 (92%)
Strand = Plus / Plus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 241 ggaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 300
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 301 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 360
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 361 acgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagc 420
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| ||| |||||||| |||| ||||||||||| ||||| ||||| |
Sbjct: 421 ccaccatcacctcccgggaggtccagaccgccgtccgcctcgtcctccccggcgagcttg 480
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 1456
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 526
Score = 109 bits (55), Expect = 5e-021
Identities = 114/135 (84%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| || ||||||||||| ||||||||||||
Sbjct: 69 gcatccatggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggag 128
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 129 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgt 188
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 189 ctccccgccggcaag 203
>ref|NM_184409.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 468
Score = 400 bits (202), Expect = e-108
Identities = 268/290 (92%)
Strand = Plus / Plus
Query: 1170 aggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaag 1229
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 172 aggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaag 231
Query: 1230 caggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatt 1289
||||| ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 232 caggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 291
Query: 1290 aacgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaag 1349
||||| ||||||||||||||||| || ||||||||||||||||| ||||| |||||||||
Sbjct: 292 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 351
Query: 1350 cctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctc 1409
|| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||
Sbjct: 352 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctt 411
Query: 1410 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctc 1459
|||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 412 gccaagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctc 461
Score = 121 bits (61), Expect = 1e-024
Identities = 111/129 (86%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 1014 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgc- 1072
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 1 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 60
Query: 1073 --------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtcccc 1124
|||||||||||| || |||||||||||||| ||||||||||||||| |||||
Sbjct: 61 gcggagaaggccgagaaggccccggccgggaagaagcccaaggcggagaagcggctcccc 120
Query: 1125 gctggcaag 1133
|| ||||||
Sbjct: 121 gccggcaag 129
>gb|CF313653.1|CF313653 HD--01-N17.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--01-N17, mRNA sequence
Length = 525
Score = 398 bits (201), Expect = e-108
Identities = 369/425 (86%), Gaps = 15/425 (3%)
Strand = Plus / Plus
Query: 1014 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgc- 1072
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 104 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgca 163
Query: 1073 --------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgggtcccc 1124
|||||||||||| ||||| ||||||||||| |||||||||||||| |||||
Sbjct: 164 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 223
Query: 1125 gctggcaagtccgctgccaaggagggcggcgagggcaagaggg---gcaggaagaagggc 1181
|| |||||| ||| |||| |||||||||| |||| || | ||||||||||
Sbjct: 224 gccggcaaggccgag---aagggcagcggcgaggggaagaaggcggggaggaagaaggcg 280
Query: 1182 aagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagcaggtgcacccg 1241
||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 281 aagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagcaggttcacccc 340
Query: 1242 gacattggcatctcctccaaggccatgtcgatcatgaactccttcattaacgatatcttc 1301
||||| ||||||||||||||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 341 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaatgacatcttc 400
Query: 1302 gagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagcctaccatcacc 1361
||||||||||| | ||| ||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 401 gagaagctcgccggagagtccgccaagctcgcccgctacaacaagaagcccaccatcacc 460
Query: 1362 tcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcgccaagcacgcc 1421
||||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct: 461 tcccgggagatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgcc 520
Query: 1422 gtctc 1426
|||||
Sbjct: 521 gtctc 525
>gb|AU031069.1|AU031069 AU031069 Rice cDNA from immature leaf including apical meristem Oryza
sativa (japonica cultivar-group) cDNA clone E60725_2Z,
mRNA sequence
Length = 441
Score = 396 bits (200), Expect = e-107
Identities = 264/286 (92%)
Strand = Plus / Plus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
|||||||||| ||||||||| | |||||||||||||||||||||| ||||||||| ||||
Sbjct: 27 ggaagaaggggaagaagagcntcgagacctacaagatctacatctncaaggtgctcaagc 86
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 87 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 146
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
|||| ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct: 147 acgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagc 206
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| ||||| |
Sbjct: 207 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttg 266
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 1456
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcac 312
>gb|AU092503.1|AU092503 AU092503 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C51480, mRNA sequence
Length = 539
Score = 396 bits (200), Expect = e-107
Identities = 275/300 (91%)
Strand = Plus / Plus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 28 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 87
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 88 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 147
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
| |||||||||||||||||||| | ||| ||||||||||||||||||| ||||||||||
Sbjct: 148 atgatatcttcgagaagctcgccggagagtccgccaagctcgcgcgctacaacaagaagc 207
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| |||||||
Sbjct: 208 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagctcg 267
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggctg 1470
|||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 268 ccaagcacgccgtctccgagggcaccaaggccgttaccaagttcacttcctcctaggctg 327
>gb|CF296221.1|CF296221 30DGS--06-H23.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--06-H23, mRNA sequence
Length = 580
Score = 396 bits (200), Expect = e-107
Identities = 275/300 (91%)
Strand = Plus / Plus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 239 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 298
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 299 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 358
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
| |||||||||||||||||||| | ||| ||||||||||||||||||| ||||||||||
Sbjct: 359 atgatatcttcgagaagctcgccggagagtccgccaagctcgcgcgctacaacaagaagc 418
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| |||||||
Sbjct: 419 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagctcg 478
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggctg 1470
|||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 479 ccaagcacgccgtctccgagggcaccaaggccgttaccaagttcacttcctcctaggctg 538
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 67 gcatccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggag 126
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 127 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgc 186
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 187 ctccccgccggcaag 201
>gb|AACV01000214.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000214, whole
genome shotgun sequence
Length = 19369
Score = 396 bits (200), Expect = e-107
Identities = 275/300 (91%)
Strand = Plus / Plus
Query: 1171 ggaagaagggcaagaagagcgtggagacctacaagatctacatcttcaaggtgctgaagc 1230
||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 6383 ggaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagc 6442
Query: 1231 aggtgcacccggacattggcatctcctccaaggccatgtcgatcatgaactccttcatta 1290
|||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 6443 aggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatca 6502
Query: 1291 acgatatcttcgagaagctcgctgctgaggccgccaagctcgcgcgctataacaagaagc 1350
| |||||||||||||||||||| | ||| ||||||||||||||||||| ||||||||||
Sbjct: 6503 atgatatcttcgagaagctcgccggagagtccgccaagctcgcgcgctacaacaagaagc 6562
Query: 1351 ctaccatcacctcccgtgagatccagacctccgtgcgcctcgtccttcccggggagctcg 1410
| |||||||||||||| |||||||||||| |||| ||||||||||| ||||| |||||||
Sbjct: 6563 ccaccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagctcg 6622
Query: 1411 ccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcctaggctg 1470
|||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 6623 ccaagcacgccgtctccgagggcaccaaggccgttaccaagttcacttcctcctaggctg 6682
Score = 117 bits (59), Expect = 2e-023
Identities = 115/135 (85%), Gaps = 9/135 (6%)
Strand = Plus / Plus
Query: 1008 gcatcgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggag 1067
||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 6211 gcatccatggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggag 6270
Query: 1068 cccgc---------ggccgagaaggcgcccgccgggaagaagccgaaggcggagaagcgg 1118
||||| |||||||||||| || || ||||||||||| ||||||||||||||
Sbjct: 6271 cccgcggcggagaaggccgagaaggccccggcggggaagaagcccaaggcggagaagcgc 6330
Query: 1119 gtccccgctggcaag 1133
||||||| ||||||
Sbjct: 6331 ctccccgccggcaag 6345
Score = 95.6 bits (48), Expect = 8e-017
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 1404 gagctcgccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcggcc 1463
|||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||
Sbjct: 2 gagctcgccaagcacgccgtctccgagggcacgaaggccgtcaccaagtttacttccgct 61
Query: 1464 taggctgc 1471
||||||||
Sbjct: 62 taggctgc 69
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,282,486
Number of Sequences: 438736
Number of extensions: 3282486
Number of successful extensions: 33711
Number of sequences better than 0.5: 635
Number of HSP's better than 0.5 without gapping: 720
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 23270
Number of HSP's gapped (non-prelim): 9993
length of query: 1833
length of database: 2,800,419,916
effective HSP length: 22
effective length of query: 1811
effective length of database: 2,790,767,724
effective search space: 5054080348164
effective search space used: 5054080348164
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)