BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.444
(1020 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU198219.1|AU198219 AU198219 Rice green shoot Oryza sati... 250 1e-063
gb|CB681630.1|CB681630 OSJNEf08C09.r OSJNEf Oryza sativa (j... 250 1e-063
gb|CB682960.1|CB682960 OSJNEf10M18.f OSJNEf Oryza sativa (j... 250 1e-063
dbj|AK061322.1| Oryza sativa (japonica cultivar-group) cDNA... 250 1e-063
dbj|AK071989.1| Oryza sativa (japonica cultivar-group) cDNA... 250 1e-063
dbj|AK104623.1| Oryza sativa (japonica cultivar-group) cDNA... 250 1e-063
dbj|AK105778.1| Oryza sativa (japonica cultivar-group) cDNA... 250 1e-063
dbj|AK105903.1| Oryza sativa (japonica cultivar-group) cDNA... 250 1e-063
gb|AACV01010566.1| Oryza sativa (japonica cultivar-group) c... 250 1e-063
ref|XM_474092.1| Oryza sativa (japonica cultivar-group), p... 250 1e-063
ref|NT_107201.1| Oryza sativa (japonica cultivar-group) 250 1e-063
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 250 1e-063
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 250 1e-063
emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromoso... 250 1e-063
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 250 1e-063
gb|AU095966.1|AU095966 AU095966 Rice green shoot Oryza sati... 244 8e-062
gb|CB682961.1|CB682961 OSJNEf10M18.r OSJNEf Oryza sativa (j... 242 3e-061
gb|AU095885.1|AU095885 AU095885 Rice green shoot Oryza sati... 232 3e-058
gb|D46826.1|D46826 RICS11741A Rice green shoot Oryza sativa... 204 7e-050
gb|AU096374.1|AU096374 AU096374 Rice green shoot Oryza sati... 174 6e-041
gb|AU095985.1|AU095985 AU095985 Rice green shoot Oryza sati... 172 2e-040
gb|CV722569.1|CV722569 YTPSP--01-N18.b1 TPSP-overexpression... 137 1e-029
gb|AU174081.1|AU174081 AU174081 Rice green shoot Oryza sati... 100 3e-018
gb|CB683750.1|CB683750 OSJNEf12J03.f OSJNEf Oryza sativa (j... 82 7e-013
gb|AU095946.1|AU095946 AU095946 Rice green shoot Oryza sati... 76 4e-011
gb|D41939.1|D41939 RICS4965A Rice shoot Oryza sativa (japon... 70 3e-009
gb|D46856.1|D46856 RICS11780A Rice green shoot Oryza sativa... 70 3e-009
gb|D46857.1|D46857 RICS11781A Rice green shoot Oryza sativa... 70 3e-009
gb|D46882.1|D46882 RICS11820A Rice green shoot Oryza sativa... 70 3e-009
gb|D46992.1|D46992 RICS12011A Rice green shoot Oryza sativa... 70 3e-009
gb|D47011.1|D47011 RICS12036A Rice green shoot Oryza sativa... 70 3e-009
gb|D47109.1|D47109 RICS12244A Rice green shoot Oryza sativa... 70 3e-009
gb|D47469.1|D47469 RICS12979A Rice green shoot Oryza sativa... 70 3e-009
gb|D48789.1|D48789 RICS15185A Rice green shoot Oryza sativa... 70 3e-009
gb|AU064525.1|AU064525 AU064525 Rice panicle shorter than 3... 70 3e-009
gb|AU070500.1|AU070500 AU070500 Rice shoot Oryza sativa (ja... 70 3e-009
gb|CB684767.1|CB684767 OSJNEf14J19.f OSJNEf Oryza sativa (j... 70 3e-009
gb|D46623.1|D46623 RICS11406A Rice green shoot Oryza sativa... 64 2e-007
gb|AU162991.1|AU162991 AU162991 Rice green shoot Oryza sati... 64 2e-007
gb|AU101405.1|AU101405 AU101405 Rice panicle shorter than 3... 62 6e-007
gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I1... 62 6e-007
gb|AACV01022087.1| Oryza sativa (japonica cultivar-group) c... 62 6e-007
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 62 6e-007
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 62 6e-007
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 62 6e-007
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 62 6e-007
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 62 6e-007
gb|D41877.1|D41877 RICS4845A Rice shoot Oryza sativa (japon... 58 1e-005
gb|AU184680.1|AU184680 AU184680 Rice root Oryza sativa (jap... 54 2e-004
gb|AU184738.1|AU184738 AU184738 Rice root Oryza sativa (jap... 54 2e-004
gb|AU082161.1|AU082161 AU082161 Rice root Oryza sativa (jap... 52 6e-004
gb|CB000988.1|CB000988 S234F_A10 Rice cold stress germinati... 52 6e-004
dbj|AK062381.1| Oryza sativa (japonica cultivar-group) cDNA... 52 6e-004
gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15... 52 6e-004
gb|AACV01022076.1| Oryza sativa (japonica cultivar-group) c... 52 6e-004
ref|NM_197681.1| Oryza sativa (japonica cultivar-group) put... 52 6e-004
gb|CV724500.1|CV724500 14Salt--01-B21.b1 Salt treated rice ... 50 0.002
gb|CV727251.1|CV727251 14Salt--05-E24.g1 Salt treated rice ... 50 0.002
gb|CV727305.1|CV727305 14Salt--05-G05.b1 Salt treated rice ... 50 0.002
gb|CV727621.1|CV727621 14Salt--05-N17.b1 Salt treated rice ... 50 0.002
gb|CV728268.1|CV728268 14Salt--06-O07.b1 Salt treated rice ... 50 0.002
gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequ... 50 0.002
dbj|AK062654.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK063037.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbar... 50 0.002
gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbar... 50 0.002
gb|AACV01012630.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
ref|NT_107183.1| Oryza sativa (japonica cultivar-group) 50 0.002
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 50 0.002
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|AU068610.1|AU068610 AU068610 Rice callus Oryza sativa (j... 48 0.009
gb|AU078327.1|AU078327 AU078327 Rice panicle at ripening st... 48 0.009
gb|AU078328.1|AU078328 AU078328 Rice panicle at ripening st... 48 0.009
gb|AU081583.1|AU081583 AU081583 Rice cDNA from young root O... 48 0.009
gb|AU082158.1|AU082158 AU082158 Rice root Oryza sativa (jap... 48 0.009
gb|CA754554.1|CA754554 BR030001000_PLATE_F03_22_029.ab1 OA ... 48 0.009
gb|CA756160.1|CA756160 BR030036000_PLATE_D01_4_012.ab1 OA O... 48 0.009
gb|CB659556.1|CB659556 OSJNEc16K08.f OSJNEc Oryza sativa (j... 48 0.009
gb|CB660560.1|CB660560 OSJNEd02H15.r OSJNEd Oryza sativa (j... 48 0.009
gb|CB678992.1|CB678992 OSJNEf01P14.r OSJNEf Oryza sativa (j... 48 0.009
gb|CB679398.1|CB679398 OSJNEf02N18.f OSJNEf Oryza sativa (j... 48 0.009
gb|CB680452.1|CB680452 OSJNEf05D04.r OSJNEf Oryza sativa (j... 48 0.009
gb|CB680925.1|CB680925 OSJNEf06H23.r OSJNEf Oryza sativa (j... 48 0.009
gb|CB681354.1|CB681354 OSJNEf07H22.f OSJNEf Oryza sativa (j... 48 0.009
gb|CB681355.1|CB681355 OSJNEf07H22.r OSJNEf Oryza sativa (j... 48 0.009
gb|CB683325.1|CB683325 OSJNEf11J01.r OSJNEf Oryza sativa (j... 48 0.009
gb|CB684926.1|CB684926 OSJNEf14O16.r OSJNEf Oryza sativa (j... 48 0.009
gb|CB685490.1|CB685490 OSJNEf15O17.f OSJNEf Oryza sativa (j... 48 0.009
gb|CF325935.1|CF325935 JMT1--04-K07.g1 AtJMT-overexpressing... 48 0.009
dbj|AK059170.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.009
dbj|AK062295.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.009
dbj|AK062781.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.009
dbj|AK062911.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.009
dbj|AK101305.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.009
dbj|AK103637.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.009
gb|AACV01010468.1| Oryza sativa (japonica cultivar-group) c... 48 0.009
gb|AACV01013105.1| Oryza sativa (japonica cultivar-group) c... 48 0.009
gb|AACV01022075.1| Oryza sativa (japonica cultivar-group) c... 48 0.009
dbj|AB023482.2| Oryza sativa (japonica cultivar-group) geno... 48 0.009
dbj|AP002864.2| Oryza sativa (japonica cultivar-group) geno... 48 0.009
ref|NM_197679.1| Oryza sativa (japonica cultivar-group) put... 48 0.009
ref|XM_473862.1| Oryza sativa (japonica cultivar-group), p... 48 0.009
ref|XM_473863.1| Oryza sativa (japonica cultivar-group), p... 48 0.009
ref|NT_079866.2| Oryza sativa (japonica cultivar-group) 48 0.009
ref|NT_079872.2| Oryza sativa (japonica cultivar-group) 48 0.009
ref|XM_550375.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.009
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.009
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.009
emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromoso... 48 0.009
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 48 0.009
gb|AU101404.1|AU101404 AU101404 Rice panicle shorter than 3... 46 0.037
gb|CB650712.1|CB650712 OSJNEb15F04.f OSJNEb Oryza sativa (j... 46 0.037
emb|AL513003.1|CNS07EFI Oryza sativa (japonica cultivar-gro... 46 0.037
dbj|AK068675.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.037
dbj|AK100716.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.037
dbj|AK110062.1| Oryza sativa (japonica cultivar-group) cDNA... 46 0.037
emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC O... 46 0.037
gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10... 46 0.037
gb|AC121489.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.037
gb|AC140006.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.037
gb|AC105732.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.037
emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OS... 46 0.037
emb|BX000558.5|CNS08CE5 Oryza sativa chromosome 12, . Parti... 46 0.037
dbj|AP004315.3| Oryza sativa (japonica cultivar-group) geno... 46 0.037
ref|NT_107145.1| Oryza sativa (japonica cultivar-group) 46 0.037
ref|NT_107234.1| Oryza sativa (japonica cultivar-group) 46 0.037
dbj|AP003852.2| Oryza sativa (japonica cultivar-group) geno... 46 0.037
dbj|AP003761.3| Oryza sativa (japonica cultivar-group) geno... 46 0.037
gb|AC145383.3| Oryza sativa chromosome 3 BAC OSJNBa0038E17 ... 46 0.037
gb|AACV01001021.1| Oryza sativa (japonica cultivar-group) c... 46 0.037
gb|AACV01002434.1| Oryza sativa (japonica cultivar-group) c... 46 0.037
gb|AACV01006019.1| Oryza sativa (japonica cultivar-group) c... 46 0.037
gb|AACV01007453.1| Oryza sativa (japonica cultivar-group) c... 46 0.037
gb|AACV01010375.1| Oryza sativa (japonica cultivar-group) c... 46 0.037
gb|AACV01016165.1| Oryza sativa (japonica cultivar-group) c... 46 0.037
gb|AACV01022117.1| Oryza sativa (japonica cultivar-group) c... 46 0.037
gb|AACV01023906.1| Oryza sativa (japonica cultivar-group) c... 46 0.037
gb|AACV01029360.1| Oryza sativa (japonica cultivar-group) C... 46 0.037
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 46 0.037
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 46 0.037
ref|NT_079911.2| Oryza sativa (japonica cultivar-group) 46 0.037
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 46 0.037
ref|NT_079961.2| Oryza sativa (japonica cultivar-group) 46 0.037
ref|NT_107189.1| Oryza sativa (japonica cultivar-group) 46 0.037
dbj|AP003621.3| Oryza sativa (japonica cultivar-group) geno... 46 0.037
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 46 0.037
dbj|AP003295.4| Oryza sativa (japonica cultivar-group) geno... 46 0.037
dbj|AP003265.4| Oryza sativa (japonica cultivar-group) geno... 46 0.037
dbj|AP003205.3| Oryza sativa (japonica cultivar-group) geno... 46 0.037
gb|CH401272.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.037
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.037
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.037
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.037
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.037
gb|CH401165.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.037
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.037
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.037
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.037
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.037
emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromoso... 46 0.037
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 46 0.037
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 46 0.037
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 46 0.037
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.037
gb|AQ796380.1|AQ796380 nbxb0063M17f CUGI Rice BAC Library O... 44 0.15
gb|AQ365861.2|AQ365861 nbxb0064H21f CUGI Rice BAC Library O... 44 0.15
gb|AU029427.1|AU029427 AU029427 Rice panicle shorter than 3... 44 0.15
gb|AU032568.1|AU032568 AU032568 Rice green shoot Oryza sati... 44 0.15
gb|AU032570.1|AU032570 AU032570 Rice green shoot Oryza sati... 44 0.15
gb|AU065430.1|AU065430 AU065430 Rice root Oryza sativa (jap... 44 0.15
gb|AU082154.1|AU082154 AU082154 Rice root Oryza sativa (jap... 44 0.15
gb|AU174369.1|AU174369 AU174369 Rice shoot Oryza sativa (ja... 44 0.15
gb|CA755383.1|CA755383 BR030019000_PLATE_E10_77_082.ab1 OA ... 44 0.15
gb|CB643292.1|CB643292 OSJNEb03O11.r OSJNEb Oryza sativa (j... 44 0.15
gb|CB679219.1|CB679219 OSJNEf02G23.r OSJNEf Oryza sativa (j... 44 0.15
gb|CB679517.1|CB679517 OSJNEf03B23.f OSJNEf Oryza sativa (j... 44 0.15
gb|CB681648.1|CB681648 OSJNEf08C24.f OSJNEf Oryza sativa (j... 44 0.15
gb|CF290928.1|CF290928 14ROOT--01-C13.g1 Rice root plasmid ... 44 0.15
gb|CF291056.1|CF291056 14ROOT--01-F09.b1 Rice root plasmid ... 44 0.15
gb|CF291057.1|CF291057 14ROOT--01-F09.g1 Rice root plasmid ... 44 0.15
gb|CF291694.1|CF291694 14ROOT--02-D16.b1 Rice root plasmid ... 44 0.15
gb|CF308910.1|CF308910 ABF--02-O12.b1 ABF3-overexpressing t... 44 0.15
gb|CF315723.1|CF315723 HD--04-L23.b1 OsHDAC1-overexpressing... 44 0.15
gb|CV722920.1|CV722920 root--01-P12.g1 Rice root lambda pha... 44 0.15
gb|CV724379.1|CV724379 root--06-N13.g1 Rice root lambda pha... 44 0.15
gb|CV724579.1|CV724579 14Salt--01-D21.b1 Salt treated rice ... 44 0.15
gb|CV725574.1|CV725574 14Salt--02-L17.g1 Salt treated rice ... 44 0.15
gb|CV725664.1|CV725664 14Salt--02-N21.b1 Salt treated rice ... 44 0.15
gb|CV725665.1|CV725665 14Salt--02-N21.g1 Salt treated rice ... 44 0.15
gb|CV725882.1|CV725882 14Salt--03-D14.g1 Salt treated rice ... 44 0.15
gb|CV726025.1|CV726025 14Salt--03-H03.b1 Salt treated rice ... 44 0.15
gb|CV727250.1|CV727250 14Salt--05-E24.b1 Salt treated rice ... 44 0.15
gb|CV728302.1|CV728302 14Salt--06-P02.b1 Salt treated rice ... 44 0.15
gb|CV728303.1|CV728303 14Salt--06-P02.g1 Salt treated rice ... 44 0.15
gb|CV734158.1|CV734158 FLO--09-G08.b1 Rice flower lambda ph... 44 0.15
gb|CX728264.1|CX728264 OSJNEf03B23.r OSJNEf Oryza sativa (j... 44 0.15
dbj|AK058218.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AK058782.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AK059956.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AK102086.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AK103618.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
dbj|AK119736.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.15
gb|AY466108.1| Oryza sativa (japonica cultivar-group) lipid... 44 0.15
gb|AC087543.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
dbj|AP006461.3| Oryza sativa (japonica cultivar-group) geno... 44 0.15
dbj|AP005002.3| Oryza sativa (japonica cultivar-group) geno... 44 0.15
dbj|AP004883.3| Oryza sativa (japonica cultivar-group) geno... 44 0.15
dbj|AP004037.3| Oryza sativa (japonica cultivar-group) geno... 44 0.15
dbj|AP005908.3| Oryza sativa (japonica cultivar-group) geno... 44 0.15
ref|NT_107141.1| Oryza sativa (japonica cultivar-group) 44 0.15
gb|AACV01004768.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01004769.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01005096.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01005458.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01016623.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01017700.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01018677.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01021686.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01022073.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
gb|AACV01022478.1| Oryza sativa (japonica cultivar-group) c... 44 0.15
ref|NM_197672.1| Oryza sativa (japonica cultivar-group) put... 44 0.15
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 44 0.15
ref|XM_467171.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.15
ref|XM_467925.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.15
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 44 0.15
ref|XM_506988.1| PREDICTED Oryza sativa (japonica cultivar-... 44 0.15
dbj|AP003907.3| Oryza sativa (japonica cultivar-group) geno... 44 0.15
dbj|AP006161.3| Oryza sativa (japonica cultivar-group) geno... 44 0.15
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 44 0.15
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 44 0.15
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 44 0.15
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 44 0.15
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 44 0.15
gb|AC135794.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.15
>gb|AU198219.1|AU198219 AU198219 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S16276, mRNA sequence
Length = 453
Score = 250 bits (126), Expect = 1e-063
Identities = 216/246 (87%)
Strand = Plus / Plus
Query: 412 cgtcctcggacaagtgccccatcgacgcgctgaagctcggcgcgtgcgtggacattctcg 471
|||||||||||| |||||||||||||||||| |||||||||| |||||||||| | ||||
Sbjct: 180 cgtcctcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcg 239
Query: 472 ggaacgaggtgcacatcggcgacgccaacgtcaagtgctgcccgctcgtgaagggcatcg 531
| |||||||||||||||||||||||| |||| | |||||||||||| ||||||| |||||
Sbjct: 240 gcaacgaggtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcg 299
Query: 532 ccgggctctccgcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctggacattt 591
|||| || ||||| || || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 300 ccggcctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatca 359
Query: 592 ccgtctacgtgcccatcgcgctggaggtgctcgtcaactgcggctgcgaggtcccgccag 651
| ||||| | ||||||||||| || | |||||||||||||||||||| |||||||| |
Sbjct: 360 gcatctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctg 419
Query: 652 gctaca 657
||||||
Sbjct: 420 gctaca 425
>gb|CB681630.1|CB681630 OSJNEf08C09.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf08C09 3', mRNA sequence
Length = 642
Score = 250 bits (126), Expect = 1e-063
Identities = 216/246 (87%)
Strand = Plus / Minus
Query: 412 cgtcctcggacaagtgccccatcgacgcgctgaagctcggcgcgtgcgtggacattctcg 471
|||||||||||| |||||||||||||||||| |||||||||| |||||||||| | ||||
Sbjct: 614 cgtcctcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcg 555
Query: 472 ggaacgaggtgcacatcggcgacgccaacgtcaagtgctgcccgctcgtgaagggcatcg 531
| |||||||||||||||||||||||| |||| | |||||||||||| ||||||| |||||
Sbjct: 554 gcaacgaggtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcg 495
Query: 532 ccgggctctccgcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctggacattt 591
|||| || ||||| || || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 494 ccggcctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatca 435
Query: 592 ccgtctacgtgcccatcgcgctggaggtgctcgtcaactgcggctgcgaggtcccgccag 651
| ||||| | ||||||||||| || | |||||||||||||||||||| |||||||| |
Sbjct: 434 gcatctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctg 375
Query: 652 gctaca 657
||||||
Sbjct: 374 gctaca 369
>gb|CB682960.1|CB682960 OSJNEf10M18.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf10M18 5', mRNA sequence
Length = 717
Score = 250 bits (126), Expect = 1e-063
Identities = 216/246 (87%)
Strand = Plus / Plus
Query: 412 cgtcctcggacaagtgccccatcgacgcgctgaagctcggcgcgtgcgtggacattctcg 471
|||||||||||| |||||||||||||||||| |||||||||| |||||||||| | ||||
Sbjct: 388 cgtcctcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcg 447
Query: 472 ggaacgaggtgcacatcggcgacgccaacgtcaagtgctgcccgctcgtgaagggcatcg 531
| |||||||||||||||||||||||| |||| | |||||||||||| ||||||| |||||
Sbjct: 448 gcaacgaggtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcg 507
Query: 532 ccgggctctccgcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctggacattt 591
|||| || ||||| || || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 508 ccggcctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatca 567
Query: 592 ccgtctacgtgcccatcgcgctggaggtgctcgtcaactgcggctgcgaggtcccgccag 651
| ||||| | ||||||||||| || | |||||||||||||||||||| |||||||| |
Sbjct: 568 gcatctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctg 627
Query: 652 gctaca 657
||||||
Sbjct: 628 gctaca 633
>dbj|AK061322.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F03, full
insert sequence
Length = 1257
Score = 250 bits (126), Expect = 1e-063
Identities = 216/246 (87%)
Strand = Plus / Plus
Query: 412 cgtcctcggacaagtgccccatcgacgcgctgaagctcggcgcgtgcgtggacattctcg 471
|||||||||||| |||||||||||||||||| |||||||||| |||||||||| | ||||
Sbjct: 679 cgtcctcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcg 738
Query: 472 ggaacgaggtgcacatcggcgacgccaacgtcaagtgctgcccgctcgtgaagggcatcg 531
| |||||||||||||||||||||||| |||| | |||||||||||| ||||||| |||||
Sbjct: 739 gcaacgaggtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcg 798
Query: 532 ccgggctctccgcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctggacattt 591
|||| || ||||| || || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 799 ccggcctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatca 858
Query: 592 ccgtctacgtgcccatcgcgctggaggtgctcgtcaactgcggctgcgaggtcccgccag 651
| ||||| | ||||||||||| || | |||||||||||||||||||| |||||||| |
Sbjct: 859 gcatctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctg 918
Query: 652 gctaca 657
||||||
Sbjct: 919 gctaca 924
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 61 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 120
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 121 ccccgctcgccctcgcgtg 139
>dbj|AK071989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094H13, full
insert sequence
Length = 1272
Score = 250 bits (126), Expect = 1e-063
Identities = 216/246 (87%)
Strand = Plus / Plus
Query: 412 cgtcctcggacaagtgccccatcgacgcgctgaagctcggcgcgtgcgtggacattctcg 471
|||||||||||| |||||||||||||||||| |||||||||| |||||||||| | ||||
Sbjct: 681 cgtcctcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcg 740
Query: 472 ggaacgaggtgcacatcggcgacgccaacgtcaagtgctgcccgctcgtgaagggcatcg 531
| |||||||||||||||||||||||| |||| | |||||||||||| ||||||| |||||
Sbjct: 741 gcaacgaggtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcg 800
Query: 532 ccgggctctccgcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctggacattt 591
|||| || ||||| || || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 801 ccggcctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatca 860
Query: 592 ccgtctacgtgcccatcgcgctggaggtgctcgtcaactgcggctgcgaggtcccgccag 651
| ||||| | ||||||||||| || | |||||||||||||||||||| |||||||| |
Sbjct: 861 gcatctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctg 920
Query: 652 gctaca 657
||||||
Sbjct: 921 gctaca 926
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 63 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 122
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 123 ccccgctcgccctcgcgtg 141
>dbj|AK104623.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-H11, full
insert sequence
Length = 1251
Score = 250 bits (126), Expect = 1e-063
Identities = 216/246 (87%)
Strand = Plus / Plus
Query: 412 cgtcctcggacaagtgccccatcgacgcgctgaagctcggcgcgtgcgtggacattctcg 471
|||||||||||| |||||||||||||||||| |||||||||| |||||||||| | ||||
Sbjct: 673 cgtcctcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcg 732
Query: 472 ggaacgaggtgcacatcggcgacgccaacgtcaagtgctgcccgctcgtgaagggcatcg 531
| |||||||||||||||||||||||| |||| | |||||||||||| ||||||| |||||
Sbjct: 733 gcaacgaggtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcg 792
Query: 532 ccgggctctccgcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctggacattt 591
|||| || ||||| || || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 793 ccggcctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatca 852
Query: 592 ccgtctacgtgcccatcgcgctggaggtgctcgtcaactgcggctgcgaggtcccgccag 651
| ||||| | ||||||||||| || | |||||||||||||||||||| |||||||| |
Sbjct: 853 gcatctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctg 912
Query: 652 gctaca 657
||||||
Sbjct: 913 gctaca 918
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 55 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 114
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 115 ccccgctcgccctcgcgtg 133
>dbj|AK105778.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-F10, full
insert sequence
Length = 1242
Score = 250 bits (126), Expect = 1e-063
Identities = 216/246 (87%)
Strand = Plus / Plus
Query: 412 cgtcctcggacaagtgccccatcgacgcgctgaagctcggcgcgtgcgtggacattctcg 471
|||||||||||| |||||||||||||||||| |||||||||| |||||||||| | ||||
Sbjct: 677 cgtcctcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcg 736
Query: 472 ggaacgaggtgcacatcggcgacgccaacgtcaagtgctgcccgctcgtgaagggcatcg 531
| |||||||||||||||||||||||| |||| | |||||||||||| ||||||| |||||
Sbjct: 737 gcaacgaggtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcg 796
Query: 532 ccgggctctccgcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctggacattt 591
|||| || ||||| || || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 797 ccggcctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatca 856
Query: 592 ccgtctacgtgcccatcgcgctggaggtgctcgtcaactgcggctgcgaggtcccgccag 651
| ||||| | ||||||||||| || | |||||||||||||||||||| |||||||| |
Sbjct: 857 gcatctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctg 916
Query: 652 gctaca 657
||||||
Sbjct: 917 gctaca 922
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 59 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 118
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 119 ccccgctcgccctcgcgtg 137
>dbj|AK105903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F11, full
insert sequence
Length = 1255
Score = 250 bits (126), Expect = 1e-063
Identities = 216/246 (87%)
Strand = Plus / Plus
Query: 412 cgtcctcggacaagtgccccatcgacgcgctgaagctcggcgcgtgcgtggacattctcg 471
|||||||||||| |||||||||||||||||| |||||||||| |||||||||| | ||||
Sbjct: 677 cgtcctcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcg 736
Query: 472 ggaacgaggtgcacatcggcgacgccaacgtcaagtgctgcccgctcgtgaagggcatcg 531
| |||||||||||||||||||||||| |||| | |||||||||||| ||||||| |||||
Sbjct: 737 gcaacgaggtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcg 796
Query: 532 ccgggctctccgcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctggacattt 591
|||| || ||||| || || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 797 ccggcctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatca 856
Query: 592 ccgtctacgtgcccatcgcgctggaggtgctcgtcaactgcggctgcgaggtcccgccag 651
| ||||| | ||||||||||| || | |||||||||||||||||||| |||||||| |
Sbjct: 857 gcatctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctg 916
Query: 652 gctaca 657
||||||
Sbjct: 917 gctaca 922
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 59 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 118
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 119 ccccgctcgccctcgcgtg 137
>gb|AACV01010566.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010566, whole
genome shotgun sequence
Length = 72288
Score = 250 bits (126), Expect = 1e-063
Identities = 216/246 (87%)
Strand = Plus / Plus
Query: 412 cgtcctcggacaagtgccccatcgacgcgctgaagctcggcgcgtgcgtggacattctcg 471
|||||||||||| |||||||||||||||||| |||||||||| |||||||||| | ||||
Sbjct: 19831 cgtcctcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcg 19890
Query: 472 ggaacgaggtgcacatcggcgacgccaacgtcaagtgctgcccgctcgtgaagggcatcg 531
| |||||||||||||||||||||||| |||| | |||||||||||| ||||||| |||||
Sbjct: 19891 gcaacgaggtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcg 19950
Query: 532 ccgggctctccgcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctggacattt 591
|||| || ||||| || || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 19951 ccggcctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatca 20010
Query: 592 ccgtctacgtgcccatcgcgctggaggtgctcgtcaactgcggctgcgaggtcccgccag 651
| ||||| | ||||||||||| || | |||||||||||||||||||| |||||||| |
Sbjct: 20011 gcatctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctg 20070
Query: 652 gctaca 657
||||||
Sbjct: 20071 gctaca 20076
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 19212 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 19271
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 19272 ccccgctcgccctcgcgtg 19290
>ref|XM_474092.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 783
Score = 250 bits (126), Expect = 1e-063
Identities = 216/246 (87%)
Strand = Plus / Plus
Query: 412 cgtcctcggacaagtgccccatcgacgcgctgaagctcggcgcgtgcgtggacattctcg 471
|||||||||||| |||||||||||||||||| |||||||||| |||||||||| | ||||
Sbjct: 527 cgtcctcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcg 586
Query: 472 ggaacgaggtgcacatcggcgacgccaacgtcaagtgctgcccgctcgtgaagggcatcg 531
| |||||||||||||||||||||||| |||| | |||||||||||| ||||||| |||||
Sbjct: 587 gcaacgaggtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcg 646
Query: 532 ccgggctctccgcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctggacattt 591
|||| || ||||| || || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 647 ccggcctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatca 706
Query: 592 ccgtctacgtgcccatcgcgctggaggtgctcgtcaactgcggctgcgaggtcccgccag 651
| ||||| | ||||||||||| || | |||||||||||||||||||| |||||||| |
Sbjct: 707 gcatctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctg 766
Query: 652 gctaca 657
||||||
Sbjct: 767 gctaca 772
Score = 65.9 bits (33), Expect = 4e-008
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 89 gctcgccatgctcgcgctctcctcgtcgccgctcgctctcgcgtg 133
|||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 33 gctcgccatgctcgcgctctcctcctccccgctcgccctcgcgtg 77
>ref|NT_107201.1| Oryza sativa (japonica cultivar-group)
Length = 2893592
Score = 250 bits (126), Expect = 1e-063
Identities = 216/246 (87%)
Strand = Plus / Minus
Query: 412 cgtcctcggacaagtgccccatcgacgcgctgaagctcggcgcgtgcgtggacattctcg 471
|||||||||||| |||||||||||||||||| |||||||||| |||||||||| | ||||
Sbjct: 222407 cgtcctcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcg 222348
Query: 472 ggaacgaggtgcacatcggcgacgccaacgtcaagtgctgcccgctcgtgaagggcatcg 531
| |||||||||||||||||||||||| |||| | |||||||||||| ||||||| |||||
Sbjct: 222347 gcaacgaggtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcg 222288
Query: 532 ccgggctctccgcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctggacattt 591
|||| || ||||| || || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 222287 ccggcctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatca 222228
Query: 592 ccgtctacgtgcccatcgcgctggaggtgctcgtcaactgcggctgcgaggtcccgccag 651
| ||||| | ||||||||||| || | |||||||||||||||||||| |||||||| |
Sbjct: 222227 gcatctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctg 222168
Query: 652 gctaca 657
||||||
Sbjct: 222167 gctaca 222162
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 223026 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 222967
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 222966 ccccgctcgccctcgcgtg 222948
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 250 bits (126), Expect = 1e-063
Identities = 216/246 (87%)
Strand = Plus / Minus
Query: 412 cgtcctcggacaagtgccccatcgacgcgctgaagctcggcgcgtgcgtggacattctcg 471
|||||||||||| |||||||||||||||||| |||||||||| |||||||||| | ||||
Sbjct: 10494873 cgtcctcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcg 10494814
Query: 472 ggaacgaggtgcacatcggcgacgccaacgtcaagtgctgcccgctcgtgaagggcatcg 531
| |||||||||||||||||||||||| |||| | |||||||||||| ||||||| |||||
Sbjct: 10494813 gcaacgaggtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcg 10494754
Query: 532 ccgggctctccgcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctggacattt 591
|||| || ||||| || || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 10494753 ccggcctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatca 10494694
Query: 592 ccgtctacgtgcccatcgcgctggaggtgctcgtcaactgcggctgcgaggtcccgccag 651
| ||||| | ||||||||||| || | |||||||||||||||||||| |||||||| |
Sbjct: 10494693 gcatctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctg 10494634
Query: 652 gctaca 657
||||||
Sbjct: 10494633 gctaca 10494628
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 10495492 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 10495433
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 10495432 ccccgctcgccctcgcgtg 10495414
Score = 48.1 bits (24), Expect = 0.009
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 552 tgcctgtgcaccgccatcaaggccaagg 579
||||| ||||||||||||||||||||||
Sbjct: 8790506 tgcctctgcaccgccatcaaggccaagg 8790533
Score = 46.1 bits (23), Expect = 0.037
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 7179229 acgcccacgcccacgcccacgcc 7179207
Score = 44.1 bits (22), Expect = 0.15
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgc 411
||||||||||||||||||||||
Sbjct: 7179223 acgcccacgcccacgcccacgc 7179202
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 250 bits (126), Expect = 1e-063
Identities = 216/246 (87%)
Strand = Plus / Minus
Query: 412 cgtcctcggacaagtgccccatcgacgcgctgaagctcggcgcgtgcgtggacattctcg 471
|||||||||||| |||||||||||||||||| |||||||||| |||||||||| | ||||
Sbjct: 29638972 cgtcctcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcg 29638913
Query: 472 ggaacgaggtgcacatcggcgacgccaacgtcaagtgctgcccgctcgtgaagggcatcg 531
| |||||||||||||||||||||||| |||| | |||||||||||| ||||||| |||||
Sbjct: 29638912 gcaacgaggtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcg 29638853
Query: 532 ccgggctctccgcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctggacattt 591
|||| || ||||| || || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 29638852 ccggcctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatca 29638793
Query: 592 ccgtctacgtgcccatcgcgctggaggtgctcgtcaactgcggctgcgaggtcccgccag 651
| ||||| | ||||||||||| || | |||||||||||||||||||| |||||||| |
Sbjct: 29638792 gcatctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctg 29638733
Query: 652 gctaca 657
||||||
Sbjct: 29638732 gctaca 29638727
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 29639591 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 29639532
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 29639531 ccccgctcgccctcgcgtg 29639513
Score = 48.1 bits (24), Expect = 0.009
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 552 tgcctgtgcaccgccatcaaggccaagg 579
||||| ||||||||||||||||||||||
Sbjct: 27934605 tgcctctgcaccgccatcaaggccaagg 27934632
Score = 46.1 bits (23), Expect = 0.037
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 26323328 acgcccacgcccacgcccacgcc 26323306
Score = 44.1 bits (22), Expect = 0.15
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgc 411
||||||||||||||||||||||
Sbjct: 26323322 acgcccacgcccacgcccacgc 26323301
>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05,
complete sequence
Length = 142556
Score = 250 bits (126), Expect = 1e-063
Identities = 216/246 (87%)
Strand = Plus / Minus
Query: 412 cgtcctcggacaagtgccccatcgacgcgctgaagctcggcgcgtgcgtggacattctcg 471
|||||||||||| |||||||||||||||||| |||||||||| |||||||||| | ||||
Sbjct: 89678 cgtcctcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcg 89619
Query: 472 ggaacgaggtgcacatcggcgacgccaacgtcaagtgctgcccgctcgtgaagggcatcg 531
| |||||||||||||||||||||||| |||| | |||||||||||| ||||||| |||||
Sbjct: 89618 gcaacgaggtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcg 89559
Query: 532 ccgggctctccgcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctggacattt 591
|||| || ||||| || || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 89558 ccggcctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatca 89499
Query: 592 ccgtctacgtgcccatcgcgctggaggtgctcgtcaactgcggctgcgaggtcccgccag 651
| ||||| | ||||||||||| || | |||||||||||||||||||| |||||||| |
Sbjct: 89498 gcatctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctg 89439
Query: 652 gctaca 657
||||||
Sbjct: 89438 gctaca 89433
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 90297 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 90238
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 90237 ccccgctcgccctcgcgtg 90219
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 250 bits (126), Expect = 1e-063
Identities = 216/246 (87%)
Strand = Plus / Minus
Query: 412 cgtcctcggacaagtgccccatcgacgcgctgaagctcggcgcgtgcgtggacattctcg 471
|||||||||||| |||||||||||||||||| |||||||||| |||||||||| | ||||
Sbjct: 32827392 cgtcctcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcg 32827333
Query: 472 ggaacgaggtgcacatcggcgacgccaacgtcaagtgctgcccgctcgtgaagggcatcg 531
| |||||||||||||||||||||||| |||| | |||||||||||| ||||||| |||||
Sbjct: 32827332 gcaacgaggtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcg 32827273
Query: 532 ccgggctctccgcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctggacattt 591
|||| || ||||| || || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 32827272 ccggcctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatca 32827213
Query: 592 ccgtctacgtgcccatcgcgctggaggtgctcgtcaactgcggctgcgaggtcccgccag 651
| ||||| | ||||||||||| || | |||||||||||||||||||| |||||||| |
Sbjct: 32827212 gcatctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctg 32827153
Query: 652 gctaca 657
||||||
Sbjct: 32827152 gctaca 32827147
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Minus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 32828010 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 32827951
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 32827950 ccccgctcgccctcgcgtg 32827932
Score = 48.1 bits (24), Expect = 0.009
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 552 tgcctgtgcaccgccatcaaggccaagg 579
||||| ||||||||||||||||||||||
Sbjct: 31095993 tgcctctgcaccgccatcaaggccaagg 31096020
Score = 48.1 bits (24), Expect = 0.009
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 552 tgcctgtgcaccgccatcaaggccaagg 579
||||| ||||||||||||||||||||||
Sbjct: 31085574 tgcctctgcaccgccatcaaggccaagg 31085601
Score = 46.1 bits (23), Expect = 0.037
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 29374843 acgcccacgcccacgcccacgcc 29374821
Score = 44.1 bits (22), Expect = 0.15
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 390 acgcccacgcccacgcccacgc 411
||||||||||||||||||||||
Sbjct: 29374837 acgcccacgcccacgcccacgc 29374816
>gb|AU095966.1|AU095966 AU095966 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11780, mRNA sequence
Length = 486
Score = 244 bits (123), Expect = 8e-062
Identities = 215/246 (87%)
Strand = Plus / Plus
Query: 412 cgtcctcggacaagtgccccatcgacgcgctgaagctcggcgcgtgcgtggacattctcg 471
|||||||||||| |||||||||||||||| | |||||||||| |||||||||| | ||||
Sbjct: 9 cgtcctcggacacgtgccccatcgacgcgntcaagctcggcgtgtgcgtggacctcctcg 68
Query: 472 ggaacgaggtgcacatcggcgacgccaacgtcaagtgctgcccgctcgtgaagggcatcg 531
| |||||||||||||||||||||||| |||| | |||||||||||| ||||||| |||||
Sbjct: 69 gcaacgaggtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcg 128
Query: 532 ccgggctctccgcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctggacattt 591
|||| || ||||| || || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 129 ccggcctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacatca 188
Query: 592 ccgtctacgtgcccatcgcgctggaggtgctcgtcaactgcggctgcgaggtcccgccag 651
| ||||| | ||||||||||| || | |||||||||||||||||||| |||||||| |
Sbjct: 189 gcatctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctg 248
Query: 652 gctaca 657
||||||
Sbjct: 249 gctaca 254
>gb|CB682961.1|CB682961 OSJNEf10M18.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf10M18 3', mRNA sequence
Length = 635
Score = 242 bits (122), Expect = 3e-061
Identities = 215/246 (87%)
Strand = Plus / Minus
Query: 412 cgtcctcggacaagtgccccatcgacgcgctgaagctcggcgcgtgcgtggacattctcg 471
|||||||||||| |||||||||||||||||| |||||||||| |||||||||| | ||||
Sbjct: 619 cgtcctcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcg 560
Query: 472 ggaacgaggtgcacatcggcgacgccaacgtcaagtgctgcccgctcgtgaagggcatcg 531
| |||||||||||||||||||||||| |||| | |||||||||||| ||||||| |||||
Sbjct: 559 gcaacgaggtgcacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatcg 500
Query: 532 ccgggctctccgcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctggacattt 591
|||| || ||||| || || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 499 ccggcctgtccgccgccgcctgcctttgcaccgccatcaaggccaaggtgctcgacatca 440
Query: 592 ccgtctacgtgcccatcgcgctggaggtgctcgtcaactgcggctgcgaggtcccgccag 651
| | ||| | ||||||||||| || | |||||||||||||||||||| |||||||| |
Sbjct: 439 gcatttacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcctg 380
Query: 652 gctaca 657
||||||
Sbjct: 379 gctaca 374
>gb|AU095885.1|AU095885 AU095885 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11406, mRNA sequence
Length = 542
Score = 232 bits (117), Expect = 3e-058
Identities = 215/247 (87%), Gaps = 1/247 (0%)
Strand = Plus / Plus
Query: 412 cgtcctcggacaagtgccccatcgacgcgctgaagctcggcgcgtgcgtggacattctcg 471
|||||||||||| |||||||||||||||||| |||||||||| |||||||||| | ||||
Sbjct: 64 cgtcctcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcg 123
Query: 472 ggaacgaggtgc-acatcggcgacgccaacgtcaagtgctgcccgctcgtgaagggcatc 530
| |||||||||| |||||||||||||| |||| | |||||||||||| ||||||| ||||
Sbjct: 124 gcaacgaggtgccacatcggcgacgcccacgtgacgtgctgcccgctggtgaaggacatc 183
Query: 531 gccgggctctccgcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctggacatt 590
||||| || ||||| || || ||||| ||||||||||| |||||||||||||| |||||
Sbjct: 184 gccggcctgtccgccgcngcctgcctctgcaccgccatnaaggccaaggtgctcgacatc 243
Query: 591 tccgtctacgtgcccatcgcgctggaggtgctcgtcaactgcggctgcgaggtcccgcca 650
| ||||| | ||||||||||| || | |||||||||||||||||||| ||||||||
Sbjct: 244 agcatctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgcct 303
Query: 651 ggctaca 657
|||||||
Sbjct: 304 ggctaca 310
>gb|D46826.1|D46826 RICS11741A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 222
Score = 204 bits (103), Expect = 7e-050
Identities = 159/178 (89%)
Strand = Plus / Plus
Query: 412 cgtcctcggacaagtgccccatcgacgcgctgaagctcggcgcgtgcgtggacattctcg 471
||||| |||||| |||||||||||||||||| |||||||||| |||||||||| | ||||
Sbjct: 4 cgtccgcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggacctcctcg 63
Query: 472 ggaacgaggtgcacatcggcgacgccaacgtcaagtgctgcccgctcgtgaagggcatcg 531
| |||||||||||||||||||||||| |||| | |||||||||||| ||||||| |||||
Sbjct: 64 gcaacgaggtgcacatcggcgacgcccacgtnacgtgctgcccgctggtgaaggacatcg 123
Query: 532 ccgggctctccgcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctggacat 589
|||| || ||||| || || ||||| |||||||||||||||||||||||||| |||||
Sbjct: 124 ccggcctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgacat 181
>gb|AU096374.1|AU096374 AU096374 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S13621, mRNA sequence
Length = 572
Score = 174 bits (88), Expect = 6e-041
Identities = 191/224 (85%), Gaps = 2/224 (0%)
Strand = Plus / Plus
Query: 436 acgcgctgaagctcggcgcgtgcgtggacattctc-gggaacgaggtgcacatcggcgac 494
||||||| ||| |||||| |||||||||| | ||| || |||||||||||||||||||||
Sbjct: 1 acgcgctcaagntcggcgtgtgcgtggacctcctccggnaacgaggtgcacatcggcgac 60
Query: 495 gccaacgtcaagtgctgcccgctcgtgaagggcatcg-ccgggctctccgcggcggcgtg 553
||| |||| | |||||||||||| ||||||| |||| |||| || ||||| || || ||
Sbjct: 61 gcccacgtgacgtgctgcccgctggtgaagganatcgaccggcctgtccgccgcngcctg 120
Query: 554 cctgtgcaccgccatcaaggccaaggtgctggacatttccgtctacgtgcccatcgcgct 613
||| |||||||||||||||||||||||||| ||||| | ||||| | |||||||||||
Sbjct: 121 cctctgcaccgccatcaaggccaaggtgctcgacatcagcatctacatccccatcgcgct 180
Query: 614 ggaggtgctcgtcaactgcggctgcgaggtcccgccaggctaca 657
|| | |||||||||||||||||||| |||||||| |||||||
Sbjct: 181 caagctcctcgtcaactgcggctgcgacgtcccgcctggctaca 224
>gb|AU095985.1|AU095985 AU095985 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11820, mRNA sequence
Length = 537
Score = 172 bits (87), Expect = 2e-040
Identities = 163/189 (86%)
Strand = Plus / Plus
Query: 469 tcgggaacgaggtgcacatcggcgacgccaacgtcaagtgctgcccgctcgtgaagggca 528
|||| |||||||||||||||||||||||| |||| | |||||||||||| ||||||| ||
Sbjct: 1 tcggcaacgaggtgcacatcggcgacgccnacgtgacgtgctgcccgctggtgaaggaca 60
Query: 529 tcgccgggctctccgcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctggaca 588
||||||| || ||||| || || ||||| |||||||||||||||||||||||||| ||||
Sbjct: 61 tcgccggcctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcgaca 120
Query: 589 tttccgtctacgtgcccatcgcgctggaggtgctcgtcaactgcggctgcgaggtcccgc 648
| | ||||| | ||||||||||| || | |||||||||||||||||||| |||||||
Sbjct: 121 tcagcatctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcccgc 180
Query: 649 caggctaca 657
| || ||||
Sbjct: 181 ctggntaca 189
>gb|CV722569.1|CV722569 YTPSP--01-N18.b1 TPSP-overexpression transgenic rice yeast two
hybrid lambda phage cDNA library (YTPSP) Oryza sativa
(japonica cultivar-group) cDNA clone YTPSP--01-N18, mRNA
sequence
Length = 508
Score = 137 bits (69), Expect = 1e-029
Identities = 164/192 (85%), Gaps = 3/192 (1%)
Strand = Plus / Minus
Query: 469 tcgggaacgaggtgcacatcg-gcgacgccaacgtcaa-gtgctgcccgctcgtgaaggg 526
|||| |||||||||||||||| |||||||| |||| | |||||||||||| |||||||
Sbjct: 503 tcggcaacgaggtgcacatcgngcgacgcccacgtgancgtgctgcccgctggtgaagga 444
Query: 527 catcgccgggc-tctccgcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctgg 585
||||||| ||| | ||||| || || ||||| |||||||||||||||||||||||||| |
Sbjct: 443 catcgcccggcctgtccgccgccgcctgcctctgcaccgccatcaaggccaaggtgctcg 384
Query: 586 acatttccgtctacgtgcccatcgcgctggaggtgctcgtcaactgcggctgcgaggtcc 645
|||| | ||||| | ||||||||||| || | |||||||||||||||||||| ||||
Sbjct: 383 acatcagcatctacatccccatcgcgctcaagctcctcgtcaactgcggctgcgacgtcc 324
Query: 646 cgccaggctaca 657
|||| |||||||
Sbjct: 323 cgcctggctaca 312
>gb|AU174081.1|AU174081 AU174081 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S15185, mRNA sequence
Length = 457
Score = 99.6 bits (50), Expect = 3e-018
Identities = 92/106 (86%)
Strand = Plus / Plus
Query: 552 tgcctgtgcaccgccatcaaggccaaggtgctggacatttccgtctacgtgcccatcgcg 611
||||| |||||||||||||||||||||||||| ||||| | ||||| | |||||||||
Sbjct: 4 tgcctttgcaccgccatcaaggccaaggtgctcgacatcagcatctacatccccatcgcg 63
Query: 612 ctggaggtgctcgtcaactgcggctgcgaggtcccgccaggctaca 657
|| || | |||||||||||||||||||| |||||||| |||||||
Sbjct: 64 ctcaagctcctcgtcaactgcggctgcgacgtcccgcctggctaca 109
>gb|CB683750.1|CB683750 OSJNEf12J03.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf12J03 5', mRNA sequence
Length = 713
Score = 81.8 bits (41), Expect = 7e-013
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 412 cgtcctcggacaagtgccccatcgacgcgctgaagctcggcgcgtgcgtggac 464
|||||||||||| |||||||||||||||||| |||||||||| ||||||||||
Sbjct: 656 cgtcctcggacacgtgccccatcgacgcgctcaagctcggcgtgtgcgtggac 708
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 38 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 97
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 98 ccccgctcgccctcgcgtg 116
>gb|AU095946.1|AU095946 AU095946 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11741, mRNA sequence
Length = 492
Score = 75.8 bits (38), Expect = 4e-011
Identities = 120/147 (81%), Gaps = 1/147 (0%)
Strand = Plus / Plus
Query: 512 cccgctcgtgaagggcatcgccgggctctccgcggcggcgtgcctgtgcaccgccatcaa 571
|||||| ||||||| ||||||||| | ||||| || || ||||| ||||||||||||||
Sbjct: 1 cccgctggtgaaggacatcgccggcntgtccgccgccgcctgcctttgcaccgccatcaa 60
Query: 572 gg-ccaaggtgctggacatttccgtctacgtgcccatcgcgctggaggtgctcgtcaact 630
|| |||||||||| ||||| | | ||| ||||||||||| || | |||||||| |
Sbjct: 61 ggcccaaggtgctcgacatcagcatntacanccccatcgcgctcaagctcctcgtcaatt 120
Query: 631 gcggctgcgaggtcccgccaggctaca 657
|||||||||| ||||||| |||||||
Sbjct: 121 gcggctgcgacgtcccgcttggctaca 147
>gb|D41939.1|D41939 RICS4965A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 439
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 47 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 106
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 107 ccccgctcgccctcgcgtg 125
>gb|D46856.1|D46856 RICS11780A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 356
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 43 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 102
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 103 ccccgctcgccctcgcgtg 121
>gb|D46857.1|D46857 RICS11781A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 339
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 43 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 102
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 103 ccccgctcgccctcgcgtg 121
>gb|D46882.1|D46882 RICS11820A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 215
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 34 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 93
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 94 ccccgctcgccctcgcgtg 112
>gb|D46992.1|D46992 RICS12011A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 279
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 29 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 88
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 89 ccccgctcgccctcgcgtg 107
>gb|D47011.1|D47011 RICS12036A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 338
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 48 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 107
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 108 ccccgctcgccctcgcgtg 126
>gb|D47109.1|D47109 RICS12244A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 377
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 48 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 107
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 108 ccccgctcgccctcgcgtg 126
>gb|D47469.1|D47469 RICS12979A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 300
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 49 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 108
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 109 ccccgctcgccctcgcgtg 127
>gb|D48789.1|D48789 RICS15185A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 426
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 37 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 96
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 97 ccccgctcgccctcgcgtg 115
>gb|AU064525.1|AU064525 AU064525 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31805_1A, mRNA sequence
Length = 243
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 34 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 93
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 94 ccccgctcgccctcgcgtg 112
>gb|AU070500.1|AU070500 AU070500 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S0601_1A, mRNA sequence
Length = 363
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 49 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 108
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 109 ccccgctcgccctcgcgtg 127
>gb|CB684767.1|CB684767 OSJNEf14J19.f OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14J19 5', mRNA sequence
Length = 638
Score = 69.9 bits (35), Expect = 3e-009
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||||||||||||||||| |
Sbjct: 48 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgctcgcgctctcctcct 107
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 108 ccccgctcgccctcgcgtg 126
>gb|D46623.1|D46623 RICS11406A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 353
Score = 63.9 bits (32), Expect = 2e-007
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||| ||||||||||||||||| |
Sbjct: 34 caatggagtccaccaaggtctcggcgatgctcctgctcgcnatgctcgcgctctcctcct 93
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 94 ccccgctcgccctcgcgtg 112
>gb|AU162991.1|AU162991 AU162991 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S14088, mRNA sequence
Length = 401
Score = 63.9 bits (32), Expect = 2e-007
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||| ||||||||||||||||| |
Sbjct: 79 caatggagtccaccaaggtctcggcgatgctcctgctcgcnatgctcgcgctctcctcct 138
Query: 115 cgccgctcgctctcgcgtg 133
| |||||||| ||||||||
Sbjct: 139 ccccgctcgccctcgcgtg 157
>gb|AU101405.1|AU101405 AU101405 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30571, mRNA sequence
Length = 711
Score = 61.9 bits (31), Expect = 6e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 543 gcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctgg 585
||||||| |||||||||||| |||||||||||||| |||||||
Sbjct: 245 gcggcggtgtgcctgtgcacggccatcaaggccaacgtgctgg 287
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete
sequence
Length = 135510
Score = 61.9 bits (31), Expect = 6e-007
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 543 gcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctgg 585
||||||| |||||||||||| |||||||||||||| |||||||
Sbjct: 66950 gcggcggtgtgcctgtgcacggccatcaaggccaacgtgctgg 66908
>gb|AACV01022087.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg022087, whole
genome shotgun sequence
Length = 9818
Score = 61.9 bits (31), Expect = 6e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 543 gcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctgg 585
||||||| |||||||||||| |||||||||||||| |||||||
Sbjct: 6514 gcggcggtgtgcctgtgcacggccatcaaggccaacgtgctgg 6556
>ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4609300
Score = 61.9 bits (31), Expect = 6e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 543 gcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctgg 585
||||||| |||||||||||| |||||||||||||| |||||||
Sbjct: 3189603 gcggcggtgtgcctgtgcacggccatcaaggccaacgtgctgg 3189645
Score = 52.0 bits (26), Expect = 6e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 552 tgcctgtgcaccgccatcaaggccaaggtgctgg 585
||||| |||||||||||||||||||| |||||||
Sbjct: 3100452 tgcctctgcaccgccatcaaggccaacgtgctgg 3100419
Score = 48.1 bits (24), Expect = 0.009
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 552 tgcctgtgcaccgccatcaaggccaaggtgct 583
||||| |||||||||||||||||||| |||||
Sbjct: 3093738 tgcctctgcaccgccatcaaggccaacgtgct 3093707
Score = 46.1 bits (23), Expect = 0.037
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 3687110 acgcccacgcccacgcccacgcc 3687132
Score = 44.1 bits (22), Expect = 0.15
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 552 tgcctgtgcaccgccatcaaggccaa 577
||||| ||||||||||||||||||||
Sbjct: 3065853 tgcctctgcaccgccatcaaggccaa 3065828
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 61.9 bits (31), Expect = 6e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 543 gcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctgg 585
||||||| |||||||||||| |||||||||||||| |||||||
Sbjct: 9242194 gcggcggtgtgcctgtgcacggccatcaaggccaacgtgctgg 9242236
Score = 52.0 bits (26), Expect = 6e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 552 tgcctgtgcaccgccatcaaggccaaggtgctgg 585
||||| |||||||||||||||||||| |||||||
Sbjct: 9124252 tgcctctgcaccgccatcaaggccaacgtgctgg 9124219
Score = 48.1 bits (24), Expect = 0.009
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 552 tgcctgtgcaccgccatcaaggccaaggtgct 583
||||| |||||||||||||||||||| |||||
Sbjct: 9117510 tgcctctgcaccgccatcaaggccaacgtgct 9117479
Score = 46.1 bits (23), Expect = 0.037
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 9739150 acgcccacgcccacgcccacgcc 9739172
Score = 44.1 bits (22), Expect = 0.15
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 552 tgcctgtgcaccgccatcaaggccaa 577
||||| ||||||||||||||||||||
Sbjct: 9100340 tgcctctgcaccgccatcaaggccaa 9100315
Score = 44.1 bits (22), Expect = 0.15
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 391 cgcccacgcccacgcccacgcc 412
||||||||||||||||||||||
Sbjct: 3794489 cgcccacgcccacgcccacgcc 3794468
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 61.9 bits (31), Expect = 6e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 543 gcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctgg 585
||||||| |||||||||||| |||||||||||||| |||||||
Sbjct: 20107988 gcggcggtgtgcctgtgcacggccatcaaggccaacgtgctgg 20108030
Score = 52.0 bits (26), Expect = 6e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 552 tgcctgtgcaccgccatcaaggccaaggtgctgg 585
||||| |||||||||||||||||||| |||||||
Sbjct: 19990046 tgcctctgcaccgccatcaaggccaacgtgctgg 19990013
Score = 48.1 bits (24), Expect = 0.009
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 552 tgcctgtgcaccgccatcaaggccaaggtgct 583
||||| |||||||||||||||||||| |||||
Sbjct: 19983304 tgcctctgcaccgccatcaaggccaacgtgct 19983273
Score = 46.1 bits (23), Expect = 0.037
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 20604944 acgcccacgcccacgcccacgcc 20604966
Score = 44.1 bits (22), Expect = 0.15
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 552 tgcctgtgcaccgccatcaaggccaa 577
||||| ||||||||||||||||||||
Sbjct: 19966134 tgcctctgcaccgccatcaaggccaa 19966109
Score = 44.1 bits (22), Expect = 0.15
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 391 cgcccacgcccacgcccacgcc 412
||||||||||||||||||||||
Sbjct: 14660283 cgcccacgcccacgcccacgcc 14660262
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 61.9 bits (31), Expect = 6e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 543 gcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctgg 585
||||||| |||||||||||| |||||||||||||| |||||||
Sbjct: 21267409 gcggcggtgtgcctgtgcacggccatcaaggccaacgtgctgg 21267451
Score = 52.0 bits (26), Expect = 6e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 552 tgcctgtgcaccgccatcaaggccaaggtgctgg 585
||||| |||||||||||||||||||| |||||||
Sbjct: 21178258 tgcctctgcaccgccatcaaggccaacgtgctgg 21178225
Score = 48.1 bits (24), Expect = 0.009
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 552 tgcctgtgcaccgccatcaaggccaaggtgct 583
||||| |||||||||||||||||||| |||||
Sbjct: 21171544 tgcctctgcaccgccatcaaggccaacgtgct 21171513
Score = 46.1 bits (23), Expect = 0.037
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 21764516 acgcccacgcccacgcccacgcc 21764538
Score = 44.1 bits (22), Expect = 0.15
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 552 tgcctgtgcaccgccatcaaggccaa 577
||||| ||||||||||||||||||||
Sbjct: 21143659 tgcctctgcaccgccatcaaggccaa 21143634
Score = 44.1 bits (22), Expect = 0.15
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 391 cgcccacgcccacgcccacgcc 412
||||||||||||||||||||||
Sbjct: 15862449 cgcccacgcccacgcccacgcc 15862428
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 61.9 bits (31), Expect = 6e-007
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 543 gcggcggcgtgcctgtgcaccgccatcaaggccaaggtgctgg 585
||||||| |||||||||||| |||||||||||||| |||||||
Sbjct: 21278673 gcggcggtgtgcctgtgcacggccatcaaggccaacgtgctgg 21278715
Score = 52.0 bits (26), Expect = 6e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 552 tgcctgtgcaccgccatcaaggccaaggtgctgg 585
||||| |||||||||||||||||||| |||||||
Sbjct: 21189522 tgcctctgcaccgccatcaaggccaacgtgctgg 21189489
Score = 48.1 bits (24), Expect = 0.009
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 552 tgcctgtgcaccgccatcaaggccaaggtgct 583
||||| |||||||||||||||||||| |||||
Sbjct: 21182808 tgcctctgcaccgccatcaaggccaacgtgct 21182777
Score = 46.1 bits (23), Expect = 0.037
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 390 acgcccacgcccacgcccacgcc 412
|||||||||||||||||||||||
Sbjct: 21776179 acgcccacgcccacgcccacgcc 21776201
Score = 44.1 bits (22), Expect = 0.15
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 552 tgcctgtgcaccgccatcaaggccaa 577
||||| ||||||||||||||||||||
Sbjct: 21154923 tgcctctgcaccgccatcaaggccaa 21154898
Score = 44.1 bits (22), Expect = 0.15
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 391 cgcccacgcccacgcccacgcc 412
||||||||||||||||||||||
Sbjct: 15870690 cgcccacgcccacgcccacgcc 15870669
>gb|D41877.1|D41877 RICS4845A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 363
Score = 58.0 bits (29), Expect = 1e-005
Identities = 66/79 (83%)
Strand = Plus / Plus
Query: 55 caatggactccaccaagttatccgcgctgctggcgctcgccatgctcgcgctctcctcgt 114
||||||| ||||||||| | || ||| |||| |||||||||| ||||||||||||| |
Sbjct: 54 caatggagtccaccaaggtctcggcgatgctcctgctcgccatgntcgcgctctcctcct 113
Query: 115 cgccgctcgctctcgcgtg 133
| |||| ||| ||||||||
Sbjct: 114 ccccgcncgccctcgcgtg 132
>gb|AU184680.1|AU184680 AU184680 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3359, mRNA sequence
Length = 402
Score = 54.0 bits (27), Expect = 2e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 552 tgcctgtgcaccgccatcaaggccaaggtgctgg 585
||||| |||||||||||||||||||| |||||||
Sbjct: 29 tgcctntgcaccgccatcaaggccaacgtgctgg 62
>gb|AU184738.1|AU184738 AU184738 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3736, mRNA sequence
Length = 450
Score = 54.0 bits (27), Expect = 2e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 552 tgcctgtgcaccgccatcaaggccaaggtgctgg 585
||||| |||||||||||||||||||| |||||||
Sbjct: 41 tgcctntgcaccgccatcaaggccaacgtgctgg 74
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,506,163
Number of Sequences: 438736
Number of extensions: 1506163
Number of successful extensions: 17450
Number of sequences better than 0.5: 243
Number of HSP's better than 0.5 without gapping: 274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 14489
Number of HSP's gapped (non-prelim): 2819
length of query: 1020
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 999
effective length of database: 2,791,206,460
effective search space: 2788415253540
effective search space used: 2788415253540
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)