BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.355
(842 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AACV01002648.1| Oryza sativa (japonica cultivar-group) c... 478 e-132
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 478 e-132
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 478 e-132
dbj|AP003231.3| Oryza sativa (japonica cultivar-group) geno... 478 e-132
dbj|AP003241.3| Oryza sativa (japonica cultivar-group) geno... 478 e-132
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 478 e-132
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 478 e-132
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 478 e-132
gb|AU097670.1|AU097670 AU097670 Rice panicle (longer than 1... 470 e-130
gb|AU064314.2|AU064314 AU064314 Rice panicle (longer than 1... 470 e-130
gb|CV729931.1|CV729931 FLO--03-D14.g1 Rice flower lambda ph... 458 e-126
ref|NM_190523.1| Oryza sativa (japonica cultivar-group), p... 458 e-126
gb|CV732641.1|CV732641 FLO--07-D08.g1 Rice flower lambda ph... 450 e-124
gb|CB662156.1|CB662156 OSJNEd05O18.f OSJNEd Oryza sativa (j... 426 e-117
gb|CB662157.1|CB662157 OSJNEd05O18.r OSJNEd Oryza sativa (j... 426 e-117
gb|CF278594.1|CF278594 14ETL--04-I24.b1 Rice etiolated leaf... 426 e-117
gb|CF291164.1|CF291164 14ROOT--01-H18.g1 Rice root plasmid ... 426 e-117
gb|CF292227.1|CF292227 14ROOT--02-P16.b1 Rice root plasmid ... 426 e-117
gb|CF333473.1|CF333473 JMT--02-G04.b1 AtJMT-overexpressing ... 426 e-117
gb|CV731987.1|CV731987 FLO--06-E06.g1 Rice flower lambda ph... 426 e-117
dbj|AP002522.1| Oryza sativa (japonica cultivar-group) geno... 426 e-117
dbj|AP003045.2| Oryza sativa (japonica cultivar-group) geno... 426 e-117
gb|AACV01000215.1| Oryza sativa (japonica cultivar-group) c... 426 e-117
ref|NM_184407.1| Oryza sativa (japonica cultivar-group), mRNA 426 e-117
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 426 e-117
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 426 e-117
gb|CF291163.1|CF291163 14ROOT--01-H18.b1 Rice root plasmid ... 418 e-114
gb|CF292040.1|CF292040 14ROOT--02-L10.b1 Rice root plasmid ... 418 e-114
gb|CF292148.1|CF292148 14ROOT--02-N19.b1 Rice root plasmid ... 418 e-114
gb|AU031069.1|AU031069 AU031069 Rice cDNA from immature lea... 414 e-113
gb|AU070936.1|AU070936 AU070936 Rice cDNA from young root O... 412 e-112
gb|CA998848.1|CA998848 S345M_G12 Rice cold stress germinati... 412 e-112
gb|BP184585.1|BP184585 BP184585 pNS rice panicle cDNA, flow... 412 e-112
gb|BP184926.1|BP184926 BP184926 pNS rice callus cDNA Oryza ... 412 e-112
ref|NM_184409.1| Oryza sativa (japonica cultivar-group), mRNA 412 e-112
gb|CV720821.1|CV720821 YBH--01-P10.b1 Rice before heading y... 410 e-112
gb|CV732516.1|CV732516 FLO--07-A10.b1 Rice flower lambda ph... 406 e-111
gb|AU097673.1|AU097673 AU097673 Rice panicle shorter than 3... 404 e-110
gb|AC098832.3| Oryza sativa (japonica cultivar-group) chrom... 404 e-110
gb|AC104284.2| Oryza sativa (japonica cultivar-group) chrom... 404 e-110
gb|AACV01012743.1| Oryza sativa (japonica cultivar-group) c... 404 e-110
ref|XM_475912.1| Oryza sativa (japonica cultivar-group), p... 404 e-110
ref|NT_107222.1| Oryza sativa (japonica cultivar-group) 404 e-110
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 404 e-110
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 404 e-110
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 404 e-110
gb|AU082356.1|AU082356 AU082356 Rice callus Oryza sativa (j... 402 e-109
gb|AU097668.1|AU097668 AU097668 Rice callus Oryza sativa (j... 402 e-109
gb|CF290908.1|CF290908 14ROOT--01-B24.g1 Rice root plasmid ... 402 e-109
gb|CF292090.1|CF292090 14ROOT--02-M12.g1 Rice root plasmid ... 402 e-109
gb|CO436072.1|CO436072 OsMR994 5MT resistant rice mutant cD... 402 e-109
gb|CV733415.1|CV733415 FLO--08-F04.g1 Rice flower lambda ph... 402 e-109
ref|NM_184405.1| Oryza sativa (japonica cultivar-group), mRNA 402 e-109
gb|AU029435.1|AU029435 AU029435 Rice panicle shorter than 3... 400 e-109
gb|AU068669.1|AU068669 AU068669 Rice callus Oryza sativa (j... 400 e-109
gb|AU068670.1|AU068670 AU068670 Rice callus Oryza sativa (j... 400 e-109
gb|AU076129.1|AU076129 AU076129 Rice panicle shorter than 3... 400 e-109
gb|AU097671.1|AU097671 AU097671 Rice panicle shorter than 3... 400 e-109
gb|AU097672.1|AU097672 AU097672 Rice panicle shorter than 3... 400 e-109
gb|CF290925.1|CF290925 14ROOT--01-C11.g1 Rice root plasmid ... 400 e-109
gb|CF318598.1|CF318598 HD--08-M15.g1 OsHDAC1-overexpressing... 400 e-109
gb|CF338483.1|CF338483 RCL1--01-N06.g1 Regenerated callus l... 400 e-109
gb|CF338741.1|CF338741 RCL1--02-K06.g1 Regenerated callus l... 400 e-109
gb|CF339512.1|CF339512 RCL1--05-B11.g1 Regenerated callus l... 400 e-109
gb|CF339642.1|CF339642 RCL1--05-I03.g1 Regenerated callus l... 400 e-109
gb|CF339736.1|CF339736 RCL1--05-M18.g1 Regenerated callus l... 400 e-109
gb|CF339787.1|CF339787 RCL1--05-O24.g1 Regenerated callus l... 400 e-109
gb|CF340036.1|CF340036 RCL1--06-M03.g1 Regenerated callus l... 400 e-109
gb|CF340228.1|CF340228 RCL1--07-F18.g1 Regenerated callus l... 400 e-109
gb|CF340525.1|CF340525 RCL1--08-E24.g1 Regenerated callus l... 400 e-109
gb|CF340729.1|CF340729 RCL1--08-P04.g1 Regenerated callus l... 400 e-109
gb|CV731425.1|CV731425 FLO--05-H09.b1 Rice flower lambda ph... 400 e-109
dbj|AP004620.3| Oryza sativa (japonica cultivar-group) geno... 400 e-109
gb|AACV01018772.1| Oryza sativa (japonica cultivar-group) c... 400 e-109
ref|XM_483094.1| Oryza sativa (japonica cultivar-group), mRNA 400 e-109
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 400 e-109
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 400 e-109
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 400 e-109
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 400 e-109
gb|CF290947.1|CF290947 14ROOT--01-D01.b1 Rice root plasmid ... 398 e-108
gb|CF307934.1|CF307934 ABF--01-I21.b1 ABF3-overexpressing t... 398 e-108
gb|CV729266.1|CV729266 FLO--02-A05.b1 Rice flower lambda ph... 398 e-108
gb|CA998897.1|CA998897 S345N_D05 Rice cold stress germinati... 396 e-108
gb|AU092503.1|AU092503 AU092503 Rice callus Oryza sativa (j... 394 e-107
gb|CF292189.1|CF292189 14ROOT--02-O19.b1 Rice root plasmid ... 394 e-107
gb|CF296221.1|CF296221 30DGS--06-H23.b1 Rice leaf plasmid c... 394 e-107
gb|AACV01000214.1| Oryza sativa (japonica cultivar-group) c... 394 e-107
ref|NM_184403.1| Oryza sativa (japonica cultivar-group), mRNA 394 e-107
gb|AU032007.1|AU032007 AU032007 Rice root Oryza sativa (jap... 392 e-106
gb|CF313968.1|CF313968 HD--02-E24.g1 OsHDAC1-overexpressing... 392 e-106
gb|AU057603.1|AU057603 AU057603 Oryza sativa mature leaf Ni... 391 e-106
gb|AU082408.1|AU082408 AU082408 Rice panicle shorter than 3... 391 e-106
gb|AU097679.1|AU097679 AU097679 Rice root Oryza sativa (jap... 391 e-106
gb|CF333577.1|CF333577 JMT--02-I13.b1 AtJMT-overexpressing ... 391 e-106
gb|CV728820.1|CV728820 FLO--01-F13.b1 Rice flower lambda ph... 391 e-106
gb|AACV01000209.1| Oryza sativa (japonica cultivar-group) c... 391 e-106
gb|AU097675.1|AU097675 AU097675 Rice immature leaf includin... 389 e-105
gb|AU057602.2|AU057602 AU057602 Oryza sativa mature leaf Ni... 389 e-105
gb|CA755827.1|CA755827 BR030029000_PLATE_B12_90_096.ab1 OA ... 387 e-105
gb|CA756225.1|CA756225 BR030038000_PLATE_A05_33_035.ab1 OA ... 387 e-105
gb|CB670862.1|CB670862 OSJNEe04C16.f OSJNEe Oryza sativa (j... 387 e-105
gb|CF338330.1|CF338330 RCL1--01-F18.g1 Regenerated callus l... 387 e-105
gb|CF340422.1|CF340422 RCL1--07-P17.g1 Regenerated callus l... 387 e-105
gb|CV730234.1|CV730234 FLO--03-K21.g1 Rice flower lambda ph... 387 e-105
dbj|AP002540.2| Oryza sativa (japonica cultivar-group) geno... 387 e-105
gb|AACV01000194.1| Oryza sativa (japonica cultivar-group) c... 387 e-105
gb|AACV01000195.1| Oryza sativa (japonica cultivar-group) c... 387 e-105
ref|NM_184371.1| Oryza sativa (japonica cultivar-group), mRNA 387 e-105
ref|NM_184374.1| Oryza sativa (japonica cultivar-group), mRNA 387 e-105
ref|NM_184399.1| Oryza sativa (japonica cultivar-group), mRNA 387 e-105
gb|AU076128.1|AU076128 AU076128 Rice panicle shorter than 3... 385 e-104
gb|AU082347.1|AU082347 AU082347 Rice callus Oryza sativa (j... 385 e-104
gb|AU097681.1|AU097681 AU097681 Rice root Oryza sativa (jap... 385 e-104
gb|CF291302.1|CF291302 14ROOT--01-K20.b1 Rice root plasmid ... 385 e-104
gb|CF297134.1|CF297134 30DGS--07-M18.b1 Rice leaf plasmid c... 385 e-104
gb|AU058394.1|AU058394 AU058394 Oryza sativa Nipponbare imm... 383 e-103
gb|AU030153.2|AU030153 AU030153 Rice cDNA from immature lea... 383 e-103
gb|C27274.1|C27274 C27274 Rice callus cDNA Oryza sativa (ja... 381 e-103
gb|CB661775.1|CB661775 OSJNEd05B14.f OSJNEd Oryza sativa (j... 381 e-103
gb|CF280347.1|CF280347 14ETL--06-P18.b1 Rice etiolated leaf... 381 e-103
gb|CF334827.1|CF334827 JMT--04-E05.b1 AtJMT-overexpressing ... 381 e-103
gb|CO435616.1|CO435616 OsMR682 5MT resistant rice mutant cD... 381 e-103
gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbar... 381 e-103
gb|AACV01006345.1| Oryza sativa (japonica cultivar-group) c... 381 e-103
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 381 e-103
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 381 e-103
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 381 e-103
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 381 e-103
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 381 e-103
gb|CB670863.1|CB670863 OSJNEe04C16.r OSJNEe Oryza sativa (j... 379 e-102
gb|CV728225.1|CV728225 14Salt--06-N03.g1 Salt treated rice ... 379 e-102
gb|CV730588.1|CV730588 FLO--04-D06.b1 Rice flower lambda ph... 379 e-102
gb|AU097674.1|AU097674 AU097674 Rice immature leaf includin... 377 e-102
gb|CV731643.1|CV731643 FLO--05-M07.g1 Rice flower lambda ph... 371 e-100
gb|AU031294.1|AU031294 AU031294 Rice cDNA from immature lea... 369 2e-099
gb|AZ130708.1|AZ130708 OSJNBb0062D13f CUGI Rice BAC Library... 367 7e-099
gb|CF279531.1|CF279531 14ETL--05-N20.b1 Rice etiolated leaf... 367 7e-099
gb|CV729210.1|CV729210 FLO--01-O23.b1 Rice flower lambda ph... 367 7e-099
gb|AU029407.1|AU029407 AU029407 Rice panicle shorter than 3... 363 1e-097
gb|CF281757.1|CF281757 14ETL--08-P04.b1 Rice etiolated leaf... 363 1e-097
gb|CF281758.1|CF281758 14ETL--08-P04.g1 Rice etiolated leaf... 363 1e-097
gb|CF290907.1|CF290907 14ROOT--01-B24.b1 Rice root plasmid ... 363 1e-097
gb|CF333474.1|CF333474 JMT--02-G04.g1 AtJMT-overexpressing ... 363 1e-097
gb|AU031202.1|AU031202 AU031202 Rice cDNA from immature lea... 361 4e-097
gb|AU174701.1|AU174701 AU174701 Rice cDNA from leaf Oryza s... 361 4e-097
gb|CF281520.1|CF281520 14ETL--08-J17.b1 Rice etiolated leaf... 361 4e-097
gb|CV732640.1|CV732640 FLO--07-D08.b1 Rice flower lambda ph... 361 4e-097
gb|CF313653.1|CF313653 HD--01-N17.g1 OsHDAC1-overexpressing... 359 2e-096
gb|C73984.2|C73984 C73984 Rice panicle shorter than 3cm Ory... 357 6e-096
gb|CV729191.1|CV729191 FLO--01-O12.b1 Rice flower lambda ph... 357 6e-096
gb|AU065894.1|AU065894 AU065894 Rice green shoot Oryza sati... 355 2e-095
gb|CF292149.1|CF292149 14ROOT--02-N19.g1 Rice root plasmid ... 355 2e-095
gb|CV724027.1|CV724027 root--05-J06.g1 Rice root lambda pha... 355 2e-095
gb|CF339471.1|CF339471 RCL1--04-P13.g1 Regenerated callus l... 353 1e-094
gb|CF291327.1|CF291327 14ROOT--01-L08.g1 Rice root plasmid ... 351 4e-094
gb|CF338869.1|CF338869 RCL1--03-A13.g1 Regenerated callus l... 351 4e-094
gb|CF340382.1|CF340382 RCL1--07-N17.g1 Regenerated callus l... 351 4e-094
gb|CF340744.1|CF340744 RCL1--08-P20.g1 Regenerated callus l... 351 4e-094
gb|CV727429.1|CV727429 14Salt--05-J04.b1 Salt treated rice ... 351 4e-094
gb|CV733073.1|CV733073 FLO--07-N06.b1 Rice flower lambda ph... 351 4e-094
gb|CF291429.1|CF291429 14ROOT--01-N15.b1 Rice root plasmid ... 349 2e-093
gb|CF292089.1|CF292089 14ROOT--02-M12.b1 Rice root plasmid ... 349 2e-093
gb|CV725853.1|CV725853 14Salt--03-C23.b1 Salt treated rice ... 349 2e-093
gb|AU070851.1|AU070851 AU070851 Rice cDNA from young root O... 347 6e-093
gb|CV725854.1|CV725854 14Salt--03-C23.g1 Salt treated rice ... 347 6e-093
gb|CV725979.1|CV725979 14Salt--03-G01.b1 Salt treated rice ... 347 6e-093
gb|CV728821.1|CV728821 FLO--01-F13.g1 Rice flower lambda ph... 347 6e-093
gb|AU097680.2|AU097680 AU097680 Rice root Oryza sativa (jap... 347 6e-093
gb|AU182734.1|AU182734 AU182734 Rice panicle shorter than 3... 345 2e-092
gb|CF325670.1|CF325670 JMT1--03-N20.g1 AtJMT-overexpressing... 345 2e-092
gb|CV731986.1|CV731986 FLO--06-E06.b1 Rice flower lambda ph... 345 2e-092
gb|CV733163.1|CV733163 FLO--07-P07.b1 Rice flower lambda ph... 343 9e-092
gb|CV734119.1|CV734119 FLO--09-F11.b1 Rice flower lambda ph... 343 9e-092
gb|CV725902.1|CV725902 14Salt--03-E01.b1 Salt treated rice ... 339 1e-090
gb|CV727136.1|CV727136 14Salt--05-C06.b1 Salt treated rice ... 339 1e-090
gb|CV727985.1|CV727985 14Salt--06-G22.b1 Salt treated rice ... 337 6e-090
gb|CV728178.1|CV728178 14Salt--06-L23.b1 Salt treated rice ... 337 6e-090
gb|AU097683.1|AU097683 AU097683 Rice cDNA from young root O... 335 2e-089
gb|AU183294.1|AU183294 AU183294 Rice cDNA from immature lea... 335 2e-089
gb|CV726600.1|CV726600 14Salt--04-F09.g1 Salt treated rice ... 335 2e-089
gb|CV727430.1|CV727430 14Salt--05-J04.g1 Salt treated rice ... 335 2e-089
gb|CV732517.1|CV732517 FLO--07-A10.g1 Rice flower lambda ph... 335 2e-089
gb|CV730589.1|CV730589 FLO--04-D06.g1 Rice flower lambda ph... 333 9e-089
gb|CV731426.1|CV731426 FLO--05-H09.g1 Rice flower lambda ph... 333 9e-089
gb|CV733685.1|CV733685 FLO--08-L10.g1 Rice flower lambda ph... 333 9e-089
gb|CV734351.1|CV734351 FLO--09-K18.g1 Rice flower lambda ph... 333 9e-089
gb|CV727137.1|CV727137 14Salt--05-C06.g1 Salt treated rice ... 331 4e-088
gb|CV728663.1|CV728663 FLO--01-B21.g1 Rice flower lambda ph... 331 4e-088
gb|CV729459.1|CV729459 FLO--02-F22.b1 Rice flower lambda ph... 331 4e-088
gb|CV731958.1|CV731958 FLO--06-D15.g1 Rice flower lambda ph... 331 4e-088
gb|C74070.1|C74070 C74070 Rice panicle shorter than 3cm Ory... 329 1e-087
gb|CF292220.1|CF292220 14ROOT--02-P12.g1 Rice root plasmid ... 329 1e-087
gb|CF293431.1|CF293431 30DGS--02-J22.g1 Rice leaf plasmid c... 329 1e-087
gb|CV725903.1|CV725903 14Salt--03-E01.g1 Salt treated rice ... 329 1e-087
gb|CV731556.1|CV731556 FLO--05-K07.b1 Rice flower lambda ph... 329 1e-087
gb|CF291303.1|CF291303 14ROOT--01-K20.g1 Rice root plasmid ... 327 6e-087
gb|CV725419.1|CV725419 14Salt--02-H24.g1 Salt treated rice ... 327 6e-087
gb|CV731557.1|CV731557 FLO--05-K07.g1 Rice flower lambda ph... 327 6e-087
gb|CF293430.1|CF293430 30DGS--02-J22.b1 Rice leaf plasmid c... 325 2e-086
gb|CV728989.1|CV728989 FLO--01-J16.g1 Rice flower lambda ph... 325 2e-086
gb|CV734434.1|CV734434 FLO--09-M20.g1 Rice flower lambda ph... 325 2e-086
gb|AU097676.1|AU097676 AU097676 Rice immature leaf includin... 321 3e-085
gb|CV734350.1|CV734350 FLO--09-K18.b1 Rice flower lambda ph... 321 3e-085
gb|AU097677.1|AU097677 AU097677 Rice cDNA from immature lea... 319 1e-084
gb|AU182176.1|AU182176 AU182176 Rice callus (2001) Oryza sa... 319 1e-084
gb|CV729192.1|CV729192 FLO--01-O12.g1 Rice flower lambda ph... 319 1e-084
gb|CV731957.1|CV731957 FLO--06-D15.b1 Rice flower lambda ph... 317 5e-084
gb|C97158.1|C97158 C97158 Rice callus Oryza sativa (japonic... 313 8e-083
gb|AU091836.1|AU091836 AU091836 Rice callus Oryza sativa (j... 313 8e-083
gb|CF292041.1|CF292041 14ROOT--02-L10.g1 Rice root plasmid ... 313 8e-083
gb|AQ362504.2|AQ362504 nbxb0050G11f CUGI Rice BAC Library O... 309 1e-081
gb|CV721456.1|CV721456 YBH--04-D02.b1 Rice before heading y... 309 1e-081
gb|AACV01001262.1| Oryza sativa (japonica cultivar-group) c... 309 1e-081
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 309 1e-081
dbj|AP003144.1| Oryza sativa (japonica cultivar-group) geno... 309 1e-081
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 309 1e-081
gb|CV729576.1|CV729576 FLO--02-J14.b1 Rice flower lambda ph... 305 2e-080
gb|CV734120.1|CV734120 FLO--09-F11.g1 Rice flower lambda ph... 305 2e-080
gb|CV729577.1|CV729577 FLO--02-J14.g1 Rice flower lambda ph... 303 8e-080
gb|CV729874.1|CV729874 FLO--03-C07.b1 Rice flower lambda ph... 303 8e-080
gb|CV731642.1|CV731642 FLO--05-M07.b1 Rice flower lambda ph... 303 8e-080
gb|C74089.1|C74089 C74089 Rice panicle shorter than 3cm Ory... 299 1e-078
gb|CV723677.1|CV723677 root--04-G10.g1 Rice root lambda pha... 299 1e-078
gb|C27926.1|C27926 C27926 Rice callus cDNA Oryza sativa (ja... 297 5e-078
gb|AC117265.2| Oryza sativa (japonica cultivar-group) chrom... 297 5e-078
gb|AACV01012349.1| Oryza sativa (japonica cultivar-group) c... 297 5e-078
ref|XM_475367.1| Oryza sativa (japonica cultivar-group), p... 297 5e-078
ref|NT_107213.1| Oryza sativa (japonica cultivar-group) 297 5e-078
gb|AU075448.1|AU075448 AU075448 Rice cDNA from immature lea... 291 3e-076
gb|CF292228.1|CF292228 14ROOT--02-P16.g1 Rice root plasmid ... 291 3e-076
gb|CV721027.1|CV721027 YBH--02-K11.b1 Rice before heading y... 291 3e-076
gb|CV733074.1|CV733074 FLO--07-N06.g1 Rice flower lambda ph... 291 3e-076
gb|AU062984.1|AU062984 AU062984 Rice callus Oryza sativa (j... 287 5e-075
gb|AU057673.1|AU057673 AU057673 Oryza sativa mature leaf Ni... 285 2e-074
gb|AU063158.1|AU063158 AU063158 Rice callus Oryza sativa (j... 285 2e-074
gb|AU172806.1|AU172806 AU172806 Rice panicle shorter than 3... 285 2e-074
gb|AU031162.1|AU031162 AU031162 Rice cDNA from immature lea... 283 8e-074
gb|CV721437.1|CV721437 YBH--04-C03.b1 Rice before heading y... 283 8e-074
gb|CV720894.1|CV720894 YBH--02-D09.b1 Rice before heading y... 281 3e-073
gb|CV729413.1|CV729413 FLO--02-E17.b1 Rice flower lambda ph... 281 3e-073
gb|CV729896.1|CV729896 FLO--03-C19.b1 Rice flower lambda ph... 280 1e-072
gb|AU174702.1|AU174702 AU174702 Rice cDNA from leaf Oryza s... 276 2e-071
gb|CA999413.1|CA999413 S234H_C02 Rice cold stress germinati... 276 2e-071
gb|D40363.1|D40363 RICS2285A Rice shoot Oryza sativa (japon... 274 7e-071
gb|AU095013.1|AU095013 AU095013 Rice immature leaf includin... 266 2e-068
gb|CF290948.1|CF290948 14ROOT--01-D01.g1 Rice root plasmid ... 266 2e-068
gb|CV733414.1|CV733414 FLO--08-F04.b1 Rice flower lambda ph... 266 2e-068
gb|CF292219.1|CF292219 14ROOT--02-P12.b1 Rice root plasmid ... 258 4e-066
gb|CF281521.1|CF281521 14ETL--08-J17.g1 Rice etiolated leaf... 254 7e-065
gb|D22681.1|D22681 RICC0893A Rice callus Oryza sativa (japo... 252 3e-064
gb|CF290924.1|CF290924 14ROOT--01-C11.b1 Rice root plasmid ... 252 3e-064
gb|CV733684.1|CV733684 FLO--08-L10.b1 Rice flower lambda ph... 250 1e-063
gb|AU225174.1|AU225174 AU225174 Oryza sativa Koshihikari pi... 246 2e-062
gb|AU063733.1|AU063733 AU063733 Rice callus Oryza sativa (j... 244 6e-062
gb|C97239.1|C97239 C97239 Rice callus Oryza sativa (japonic... 242 3e-061
gb|AU092764.1|AU092764 AU092764 Rice callus Oryza sativa (j... 234 6e-059
gb|AU097669.1|AU097669 AU097669 Rice callus Oryza sativa (j... 226 2e-056
gb|CF312627.1|CF312627 ABF--08-H11.g1 ABF3-overexpressing t... 226 2e-056
gb|C98207.1|C98207 C98207 Rice callus Oryza sativa (japonic... 216 1e-053
gb|CV733085.1|CV733085 FLO--07-N13.g1 Rice flower lambda ph... 212 2e-052
gb|AQ157995.1|AQ157995 nbxb0010O24f CUGI Rice BAC Library O... 210 9e-052
gb|CF280348.1|CF280348 14ETL--06-P18.g1 Rice etiolated leaf... 210 9e-052
gb|C97210.1|C97210 C97210 Rice callus Oryza sativa (japonic... 202 2e-049
gb|AU184845.1|AU184845 AU184845 Rice cDNA from young root O... 202 2e-049
gb|D48146.2|D48146 RICS14215A Rice green shoot Oryza sativa... 202 2e-049
gb|AU070557.1|AU070557 AU070557 Rice shoot Oryza sativa (ja... 194 5e-047
gb|CF277857.1|CF277857 14ETL--03-I19.g1 Rice etiolated leaf... 194 5e-047
gb|AU062949.2|AU062949 AU062949 Rice callus Oryza sativa (j... 192 2e-046
gb|CF339158.1|CF339158 RCL1--03-P11.g1 Regenerated callus l... 192 2e-046
gb|D23591.1|D23591 RICC3057A Rice callus Oryza sativa (japo... 186 1e-044
gb|D49215.1|D49215 RICS16333A Rice green shoot Oryza sativa... 184 5e-044
gb|C97157.1|C97157 C97157 Rice callus Oryza sativa (japonic... 182 2e-043
gb|CV725777.1|CV725777 14Salt--03-B01.g1 Salt treated rice ... 182 2e-043
gb|CF277856.1|CF277856 14ETL--03-I19.b1 Rice etiolated leaf... 178 3e-042
gb|CV728988.1|CV728988 FLO--01-J16.b1 Rice flower lambda ph... 178 3e-042
dbj|AK059159.1| Oryza sativa (japonica cultivar-group) cDNA... 178 3e-042
gb|CV731377.1|CV731377 FLO--05-G05.g1 Rice flower lambda ph... 176 1e-041
gb|AQ868678.1|AQ868678 nbeb0030B11r CUGI Rice BAC Library (... 174 5e-041
gb|C73966.1|C73966 C73966 Rice panicle shorter than 3cm Ory... 172 2e-040
gb|D25082.1|D25082 RICR3125A Rice root Oryza sativa (japoni... 172 2e-040
gb|D22526.1|D22526 RICC0138B Rice callus Oryza sativa (japo... 168 3e-039
gb|AU095590.1|AU095590 AU095590 Rice cDNA from young root O... 168 3e-039
gb|AU082915.1|AU082915 AU082915 Rice callus Oryza sativa (j... 161 8e-037
gb|CV728224.1|CV728224 14Salt--06-N03.b1 Salt treated rice ... 161 8e-037
gb|C74145.1|C74145 C74145 Rice panicle shorter than 3cm Ory... 149 3e-033
gb|D15624.1|D15624 RICC0972A Rice callus Oryza sativa (japo... 145 4e-032
gb|AU064441.1|AU064441 AU064441 Rice panicle shorter than 3... 145 4e-032
gb|CF315774.1|CF315774 HD--04-N03.b1 OsHDAC1-overexpressing... 145 4e-032
gb|C74202.1|C74202 C74202 Rice panicle shorter than 3cm Ory... 137 1e-029
gb|CF278595.1|CF278595 14ETL--04-I24.g1 Rice etiolated leaf... 137 1e-029
gb|CV730130.1|CV730130 FLO--03-I07.b1 Rice flower lambda ph... 137 1e-029
gb|AU096554.1|AU096554 AU096554 Rice green shoot Oryza sati... 135 4e-029
gb|AU058172.1|AU058172 AU058172 Oryza sativa Nipponbare imm... 129 3e-027
gb|D24618.1|D24618 RICR2259A Rice root Oryza sativa (japoni... 121 6e-025
gb|CF334828.1|CF334828 JMT--04-E05.g1 AtJMT-overexpressing ... 121 6e-025
gb|CV729460.1|CV729460 FLO--02-F22.g1 Rice flower lambda ph... 121 6e-025
gb|AU064386.1|AU064386 AU064386 Rice panicle shorter than 3... 119 3e-024
gb|D23918.1|D23918 RICR0573A Rice root Oryza sativa (japoni... 107 1e-020
gb|AU097667.1|AU097667 AU097667 Rice callus Oryza sativa (j... 105 4e-020
gb|D22527.1|D22527 RICC0138A Rice callus Oryza sativa (japo... 103 2e-019
gb|CF338670.1|CF338670 RCL1--02-G18.g1 Regenerated callus l... 101 6e-019
dbj|AP003918.3| Oryza sativa (japonica cultivar-group) geno... 92 6e-016
gb|AACV01017940.1| Oryza sativa (japonica cultivar-group) c... 92 6e-016
dbj|AP005390.2| Oryza sativa (japonica cultivar-group) geno... 92 6e-016
gb|AU058177.1|AU058177 AU058177 Oryza sativa Nipponbare imm... 90 2e-015
gb|CV729930.1|CV729930 FLO--03-D14.b1 Rice flower lambda ph... 90 2e-015
gb|CV725556.1|CV725556 14Salt--02-L07.b1 Salt treated rice ... 88 9e-015
gb|C27000.1|C27000 C27000 Rice callus cDNA Oryza sativa (ja... 86 4e-014
gb|AU097666.1|AU097666 AU097666 Rice callus Oryza sativa (j... 84 1e-013
gb|AU029901.1|AU029901 AU029901 Rice cDNA from immature lea... 82 6e-013
gb|CV727986.1|CV727986 14Salt--06-G22.g1 Salt treated rice ... 82 6e-013
dbj|AP004558.3| Oryza sativa (japonica cultivar-group) geno... 82 6e-013
dbj|AP004665.4| Oryza sativa (japonica cultivar-group) geno... 82 6e-013
gb|AACV01018587.1| Oryza sativa (japonica cultivar-group) c... 82 6e-013
dbj|AK108119.1| Oryza sativa (japonica cultivar-group) cDNA... 78 9e-012
ref|XM_482672.1| Oryza sativa (japonica cultivar-group), mRNA 78 9e-012
gb|CV733627.1|CV733627 FLO--08-K01.g1 Rice flower lambda ph... 76 3e-011
gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbar... 76 3e-011
gb|AACV01006503.1| Oryza sativa (japonica cultivar-group) c... 76 3e-011
gb|AQ161058.1|AQ161058 nbxb0006M04f CUGI Rice BAC Library O... 74 1e-010
gb|C27445.1|C27445 C27445 Rice callus cDNA Oryza sativa (ja... 74 1e-010
gb|CF279284.1|CF279284 14ETL--05-I13.b1 Rice etiolated leaf... 72 5e-010
dbj|AP005069.2| Oryza sativa (japonica cultivar-group) geno... 72 5e-010
gb|AACV01020855.1| Oryza sativa (japonica cultivar-group) c... 72 5e-010
ref|NT_107179.1| Oryza sativa (japonica cultivar-group) 72 5e-010
gb|CH401245.1| Oryza sativa (japonica cultivar-group) chrom... 72 5e-010
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 72 5e-010
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 72 5e-010
gb|AU058305.1|AU058305 AU058305 Oryza sativa Nipponbare imm... 70 2e-009
gb|AU093193.1|AU093193 AU093193 Rice callus Oryza sativa (j... 70 2e-009
gb|CV731376.1|CV731376 FLO--05-G05.b1 Rice flower lambda ph... 70 2e-009
ref|NT_107237.1| Oryza sativa (japonica cultivar-group) 70 2e-009
dbj|AP006164.2| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
dbj|AP006166.3| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
gb|AACV01013677.1| Oryza sativa (japonica cultivar-group) c... 70 2e-009
gb|CH401210.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
emb|AL731874.4|CNS08C8E Oryza sativa chromosome 12, . BAC O... 68 8e-009
ref|NT_079833.2| Oryza sativa (japonica cultivar-group) 68 8e-009
gb|AACV01011256.1| Oryza sativa (japonica cultivar-group) c... 68 8e-009
gb|CH401192.1| Oryza sativa (japonica cultivar-group) chrom... 68 8e-009
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 68 8e-009
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 68 8e-009
gb|CF279532.1|CF279532 14ETL--05-N20.g1 Rice etiolated leaf... 66 3e-008
gb|CF315294.1|CF315294 HD--04-C15.b1 OsHDAC1-overexpressing... 66 3e-008
dbj|AK106505.1| Oryza sativa (japonica cultivar-group) cDNA... 66 3e-008
ref|NT_107078.1| Oryza sativa (japonica cultivar-group) 66 3e-008
dbj|AP006162.2| Oryza sativa (japonica cultivar-group) geno... 66 3e-008
gb|AACV01002319.1| Oryza sativa (japonica cultivar-group) c... 66 3e-008
gb|AACV01020566.1| Oryza sativa (japonica cultivar-group) c... 66 3e-008
dbj|AP002972.3| Oryza sativa (japonica cultivar-group) geno... 66 3e-008
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 66 3e-008
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 66 3e-008
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 66 3e-008
gb|CV733062.1|CV733062 FLO--07-M24.b1 Rice flower lambda ph... 64 1e-007
gb|D23468.1|D23468 RICC2857A Rice callus Oryza sativa (japo... 62 5e-007
gb|AU030152.1|AU030152 AU030152 Rice cDNA from immature lea... 62 5e-007
gb|CF296222.1|CF296222 30DGS--06-H23.g1 Rice leaf plasmid c... 62 5e-007
gb|AC129224.2| Oryza sativa (japonica cultivar-group) chrom... 62 5e-007
gb|AC120888.2| Oryza sativa (japonica cultivar-group) chrom... 62 5e-007
ref|NT_107135.1| Oryza sativa (japonica cultivar-group) 62 5e-007
gb|AACV01023698.1| Oryza sativa (japonica cultivar-group) c... 62 5e-007
gb|CH401266.1| Oryza sativa (japonica cultivar-group) chrom... 62 5e-007
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 62 5e-007
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 62 5e-007
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 62 5e-007
dbj|AP005286.3| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
gb|AACV01004890.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 60 2e-006
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
gb|CF315295.1|CF315295 HD--04-C15.g1 OsHDAC1-overexpressing... 58 8e-006
gb|AACV01005126.1| Oryza sativa (japonica cultivar-group) c... 58 8e-006
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 58 8e-006
dbj|AP004160.2| Oryza sativa (japonica cultivar-group) geno... 58 8e-006
dbj|AP005885.3| Oryza sativa (japonica cultivar-group) geno... 58 8e-006
gb|AC139174.3| Oryza sativa chromosome 3 BAC OSJNBb0065L20 ... 56 3e-005
gb|AACV01007551.1| Oryza sativa (japonica cultivar-group) c... 56 3e-005
ref|NT_107185.1| Oryza sativa (japonica cultivar-group) 56 3e-005
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 56 3e-005
gb|AU062423.1|AU062423 AU062423 Rice callus Oryza sativa (j... 54 1e-004
gb|AC120984.3| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
ref|NT_107132.1| Oryza sativa (japonica cultivar-group) 54 1e-004
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 54 1e-004
dbj|AP003622.3| Oryza sativa (japonica cultivar-group) geno... 54 1e-004
gb|AACV01005861.1| Oryza sativa (japonica cultivar-group) c... 54 1e-004
gb|AACV01014439.1| Oryza sativa (japonica cultivar-group) c... 54 1e-004
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
gb|AQ870965.1|AQ870965 nbeb0041J05r CUGI Rice BAC Library (... 52 5e-004
gb|AC134341.2| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
ref|NT_079878.2| Oryza sativa (japonica cultivar-group) 52 5e-004
dbj|AP005929.3| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
gb|AACV01010945.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
gb|AACV01012890.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
gb|AACV01014110.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
dbj|AP002837.2| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
dbj|AP001389.1| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 52 5e-004
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 52 5e-004
gb|CH401214.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|D23046.1|D23046 RICC2090A Rice callus Oryza sativa (japo... 50 0.002
gb|CA755693.1|CA755693 BR030026001_BR030_B03_18_025.ab1 OA ... 50 0.002
gb|C97215.2|C97215 C97215 Rice callus Oryza sativa (japonic... 50 0.002
gb|AC135914.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|AC136226.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
dbj|AP004801.3| Oryza sativa (japonica cultivar-group) geno... 50 0.002
gb|AACV01003786.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01011154.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01019447.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01021331.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
ref|NT_080065.1| Oryza sativa (japonica cultivar-group) chr... 50 0.002
ref|NT_107079.1| Oryza sativa (japonica cultivar-group) 50 0.002
ref|NT_107225.1| Oryza sativa (japonica cultivar-group) 50 0.002
dbj|AP005839.3| Oryza sativa (japonica cultivar-group) geno... 50 0.002
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 50 0.002
gb|CH401253.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|CH401241.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 50 0.002
gb|AC083945.3| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|D47132.1|D47132 RICS12273A Rice green shoot Oryza sativa... 48 0.008
gb|C74297.1|C74297 C74297 Rice panicle shorter than 3cm Ory... 48 0.008
dbj|AP004631.1| Oryza sativa (japonica cultivar-group) chro... 48 0.008
dbj|AP004465.3| Oryza sativa (japonica cultivar-group) geno... 48 0.008
gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 ... 48 0.008
gb|AC137921.2| Oryza sativa chromosome 3 BAC OSJNBa0027H16 ... 48 0.008
emb|AL731583.2|OSJN00231 Oryza sativa genomic DNA, chromoso... 48 0.008
dbj|AP005532.3| Oryza sativa (japonica cultivar-group) geno... 48 0.008
gb|AACV01003979.1| Oryza sativa (japonica cultivar-group) c... 48 0.008
gb|AACV01007221.1| Oryza sativa (japonica cultivar-group) c... 48 0.008
gb|AACV01007758.1| Oryza sativa (japonica cultivar-group) c... 48 0.008
gb|AACV01009048.1| Oryza sativa (japonica cultivar-group) c... 48 0.008
gb|AACV01017932.1| Oryza sativa (japonica cultivar-group) c... 48 0.008
gb|AACV01018311.1| Oryza sativa (japonica cultivar-group) c... 48 0.008
ref|XM_463083.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.008
ref|NT_079855.2| Oryza sativa (japonica cultivar-group) 48 0.008
ref|NT_107174.1| Oryza sativa (japonica cultivar-group) 48 0.008
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 48 0.008
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.008
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.008
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.008
emb|AL731604.3|OSJN00247 Oryza sativa genomic DNA, chromoso... 48 0.008
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 48 0.008
gb|CV722702.1|CV722702 root--01-F02.g1 Rice root lambda pha... 46 0.031
dbj|AP004661.3| Oryza sativa (japonica cultivar-group) geno... 46 0.031
gb|AC108883.1| Genomic sequence for (japonica cultivar-grou... 46 0.031
gb|AC145127.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.031
dbj|AP004461.3| Oryza sativa (japonica cultivar-group) geno... 46 0.031
dbj|AP004554.3| Oryza sativa (japonica cultivar-group) geno... 46 0.031
gb|AC134256.4| Oryza sativa (japonica cultivar-group), comp... 46 0.031
gb|AC130603.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.031
dbj|AP005740.3| Oryza sativa (japonica cultivar-group) geno... 46 0.031
ref|NT_107091.1| Oryza sativa (japonica cultivar-group), co... 46 0.031
gb|AACV01001435.1| Oryza sativa (japonica cultivar-group) c... 46 0.031
gb|AACV01012563.1| Oryza sativa (japonica cultivar-group) c... 46 0.031
gb|AACV01013044.1| Oryza sativa (japonica cultivar-group) c... 46 0.031
gb|AACV01017271.1| Oryza sativa (japonica cultivar-group) c... 46 0.031
gb|AACV01018073.1| Oryza sativa (japonica cultivar-group) c... 46 0.031
gb|AACV01023287.1| Oryza sativa (japonica cultivar-group) c... 46 0.031
gb|AACV01025707.1| Oryza sativa (japonica cultivar-group) C... 46 0.031
dbj|AP006554.2| Oryza sativa (japonica cultivar-group) geno... 46 0.031
ref|NT_080060.1| Oryza sativa (japonica cultivar-group) chr... 46 0.031
ref|NT_107217.1| Oryza sativa (japonica cultivar-group) 46 0.031
dbj|AP003449.2| Oryza sativa (japonica cultivar-group) geno... 46 0.031
dbj|AP004362.4| Oryza sativa (japonica cultivar-group) geno... 46 0.031
gb|CH401300.1| Oryza sativa (japonica cultivar-group) scaff... 46 0.031
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.031
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.031
gb|AC166065.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.031
gb|AC079632.4| Oryza sativa (japonica cultivar-group) chrom... 46 0.031
gb|C20006.1|C20006 C20006 Rice panicle at ripening stage Or... 44 0.12
gb|C20148.1|C20148 C20148 Rice panicle at ripening stage Or... 44 0.12
gb|C20231.1|C20231 C20231 Rice panicle at ripening stage Or... 44 0.12
gb|C20247.1|C20247 C20247 Rice panicle at ripening stage Or... 44 0.12
gb|C20253.1|C20253 C20253 Rice panicle at ripening stage Or... 44 0.12
gb|C24997.1|C24997 C24997 Rice green shoot Oryza sativa (ja... 44 0.12
gb|C74210.1|C74210 C74210 Rice panicle shorter than 3cm Ory... 44 0.12
gb|C93565.1|C93565 C93565 Rice callus Oryza sativa (japonic... 44 0.12
gb|D22733.1|D22733 RICC1108A Rice callus Oryza sativa (japo... 44 0.12
gb|D22836.1|D22836 RICC1553A Rice callus Oryza sativa (japo... 44 0.12
gb|D22918.1|D22918 RICC1779A Rice callus Oryza sativa (japo... 44 0.12
gb|D23481.1|D23481 RICC2879A Rice callus Oryza sativa (japo... 44 0.12
gb|D23543.1|D23543 RICC2981A Rice callus Oryza sativa (japo... 44 0.12
gb|C98178.1|C98178 C98178 Rice callus Oryza sativa (japonic... 44 0.12
gb|C98179.1|C98179 C98179 Rice callus Oryza sativa (japonic... 44 0.12
gb|C99002.1|C99002 C99002 Rice panicle at flowering stage O... 44 0.12
gb|AU030114.1|AU030114 AU030114 Rice cDNA from immature lea... 44 0.12
gb|AU056447.1|AU056447 AU056447 Oryza sativa mature leaf Ni... 44 0.12
gb|AU056985.1|AU056985 AU056985 Oryza sativa mature leaf Ni... 44 0.12
gb|AU057347.1|AU057347 AU057347 Oryza sativa mature leaf Ni... 44 0.12
gb|AU057348.1|AU057348 AU057348 Oryza sativa mature leaf Ni... 44 0.12
gb|AU057690.1|AU057690 AU057690 Oryza sativa mature leaf Ni... 44 0.12
gb|AU062841.1|AU062841 AU062841 Rice callus Oryza sativa (j... 44 0.12
gb|AU062951.1|AU062951 AU062951 Rice callus Oryza sativa (j... 44 0.12
gb|AU063186.1|AU063186 AU063186 Rice callus Oryza sativa (j... 44 0.12
gb|AU063245.1|AU063245 AU063245 Rice callus Oryza sativa (j... 44 0.12
>gb|AACV01002648.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002648, whole
genome shotgun sequence
Length = 41063
Score = 478 bits (241), Expect = e-132
Identities = 374/417 (89%), Gaps = 6/417 (1%)
Strand = Plus / Plus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 17722 aacttggtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccggggagg 17781
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 17782 acgaggcgcaccgaggtctggatctcgcgggaggtgatggtcggcttcttgttgtagcgg 17841
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
||||| ||||||||| || |||||||||||||| ||||||||||| |||||||||
Sbjct: 17842 gcgagacgggcggcctcctgggcgagcttctcgaagatatcgttgatgaacgagttcatg 17901
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| ||||||||||||||||| || || || || || |||||||||||||| ||||||||
Sbjct: 17902 atcgacatggccttggacgatatcccgatatcgggatgcacctgcttgaggaccttgaaa 17961
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttct---cg 626
||||||||||| || || ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 17962 atgtagatcttataagtttcgacgctcttcttggccttcttcttccccttcttctcgccg 18021
Query: 627 ccgccctcctt---gcccggcacgcgcttctccgccctgggcttcttctcggccttctcc 683
||||||||||| ||||||||| |||||||| ||| ||||||||||||| |||||||||
Sbjct: 18022 ccgccctccttggcgcccggcacccgcttctcggccttgggcttcttctccgccttctcc 18081
Query: 684 tccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcgggaattcg 740
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 18082 tccaccggcttcttctccgcgggcttcttctccgccttgggcgccatcgggaattcg 18138
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 478 bits (241), Expect = e-132
Identities = 374/417 (89%), Gaps = 6/417 (1%)
Strand = Plus / Plus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 36088115 aacttggtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccggggagg 36088174
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 36088175 acgaggcgcaccgaggtctggatctcgcgggaggtgatggtcggcttcttgttgtagcgg 36088234
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
||||| ||||||||| || |||||||||||||| ||||||||||| |||||||||
Sbjct: 36088235 gcgagacgggcggcctcctgggcgagcttctcgaagatatcgttgatgaacgagttcatg 36088294
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| ||||||||||||||||| || || || || || |||||||||||||| ||||||||
Sbjct: 36088295 atcgacatggccttggacgatatcccgatatcgggatgcacctgcttgaggaccttgaaa 36088354
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttct---cg 626
||||||||||| || || ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 36088355 atgtagatcttataagtttcgacgctcttcttggccttcttcttccccttcttctcgccg 36088414
Query: 627 ccgccctcctt---gcccggcacgcgcttctccgccctgggcttcttctcggccttctcc 683
||||||||||| ||||||||| |||||||| ||| ||||||||||||| |||||||||
Sbjct: 36088415 ccgccctccttggcgcccggcacccgcttctcggccttgggcttcttctccgccttctcc 36088474
Query: 684 tccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcgggaattcg 740
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 36088475 tccaccggcttcttctccgcgggcttcttctccgccttgggcgccatcgggaattcg 36088531
Score = 426 bits (215), Expect = e-117
Identities = 275/295 (93%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 2854400 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 2854459
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || | |||||||||||||||||||| |||||||||||
Sbjct: 2854460 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 2854519
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 2854520 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 2854579
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 2854580 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 2854639
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 2854640 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 2854694
Score = 412 bits (208), Expect = e-112
Identities = 277/300 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||| || |||||||| || |||||||||||||||||||||||||||||||| ||
Sbjct: 2869457 ctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaag 2869398
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 2869397 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 2869338
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 2869337 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 2869278
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 2869277 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 2869218
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||
Sbjct: 2869217 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 2869158
Score = 402 bits (203), Expect = e-109
Identities = 272/295 (92%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 2841461 ctaagcggaagtaaacttggtgacggccttcgtgccctcggagacggcgtgcttggcgag 2841520
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||| |||||||||||||| |||||||||||
Sbjct: 2841521 ctcgccggggaggacgaggcggacggaggtctgaatctcccgggaggtgatggtgggctt 2841580
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
|||||||||||||||||||||||||| ||| | || |||||||||||||||||||||||
Sbjct: 2841581 cttgttgtagcgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgat 2841640
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 2841641 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtgaacctgctt 2841700
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 2841701 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 2841755
Score = 394 bits (199), Expect = e-107
Identities = 268/291 (92%)
Strand = Plus / Plus
Query: 321 gaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcg 380
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2834852 gaggaagtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcg 2834911
Query: 381 ccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttg 440
|| || ||||||||||| || | |||||||||||||||||||| |||||||||||||||
Sbjct: 2834912 ccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttg 2834971
Query: 441 ttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaag 500
|||||||| ||||||||||||| ||| | || |||||||||||||| || |||||||||
Sbjct: 2834972 ttgtagcgcgcgagcttggcggactctccggcgagcttctcgaagatatcattgatgaag 2835031
Query: 501 gagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagc 560
|||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||||
Sbjct: 2835032 gagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagc 2835091
Query: 561 accttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 2835092 accttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2835142
Score = 391 bits (197), Expect = e-106
Identities = 272/297 (91%)
Strand = Plus / Plus
Query: 315 atctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcg 374
||||||| ||| || |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 2817035 atctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcg 2817094
Query: 375 agctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggc 434
|||||||| || ||||||||||| || || |||||||||||||| ||||| |||||||||
Sbjct: 2817095 agctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtgggc 2817154
Query: 435 ttcttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttg 494
|||||||||||||| ||||||||||||| ||| | || |||||||||||||||||||||
Sbjct: 2817155 ttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgttg 2817214
Query: 495 atgaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgc 554
|||||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||
Sbjct: 2817215 atgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgc 2817274
Query: 555 ttgagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 2817275 ttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2817331
Score = 387 bits (195), Expect = e-105
Identities = 258/279 (92%)
Strand = Plus / Minus
Query: 339 acggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaaggacgaggcgc 398
||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 2684043 acggccttggtgccctcagagacggcgtgcttggcgagctcgccggggaggacgaggcgg 2683984
Query: 399 accgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgggcgagcttg 458
|| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2683983 acggaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgggcgagcttg 2683924
Query: 459 gcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatgatggacatg 518
|||| ||| | || ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2683923 gcggactctccggcgagcttctcgaagatgtcattgatgaaggagttcatgatggacatg 2683864
Query: 519 gccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaagatgtagatc 578
|||||||| ||||| || ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 2683863 gccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttgaagatgtagatc 2683804
Query: 579 ttgtacgtctcgacgctcttcttggccttcttcttcccc 617
||||| ||||||||||||||||| ||||||||| |||||
Sbjct: 2683803 ttgtaggtctcgacgctcttcttcgccttcttcctcccc 2683765
Score = 387 bits (195), Expect = e-105
Identities = 258/279 (92%)
Strand = Plus / Minus
Query: 333 ttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaaggacg 392
||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 2671726 ttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccggggaggacg 2671667
Query: 393 aggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgggcg 452
||||| || || ||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 2671666 aggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtagcgggcg 2671607
Query: 453 agcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatgatg 512
|||||||||| ||| | || |||||||||||||||||||||||||||||||||||||||
Sbjct: 2671606 agcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttcatgatg 2671547
Query: 513 gacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaagatg 572
|||||||||||||| ||||| || || || ||||| ||||||||||||||||||||||||
Sbjct: 2671546 gacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttgaagatg 2671487
Query: 573 tagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||| ||||||||||||||||| |||||||||
Sbjct: 2671486 tagatcttgtaggtctcgacgctcttcttcgccttcttc 2671448
Score = 309 bits (156), Expect = 1e-081
Identities = 263/300 (87%), Gaps = 9/300 (3%)
Strand = Plus / Plus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 17500455 aacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccggggagg 17500514
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|||||||| || || |||| |||||| |||||||| | ||||||||||||||||||||
Sbjct: 17500515 acgaggcggacggaggtctagatctcgcgggaggtggcgatgggcttcttgttgtagcgg 17500574
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
||||| | ||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 17500575 gcgaggtgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttcatg 17500634
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| |||||||||||||| ||||| || |||||||||||||||||||| || |||||||||
Sbjct: 17500635 atcgacatggccttggaggagatgccgatgtccgggtgcacctgcttcaggaccttgaag 17500694
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccg 629
|||||||| ||||||||||||||| ||||||||| |||||||||| ||||||
Sbjct: 17500695 atgtagat---------ctcgacgctcttcttcgccttcttcctccccttcttgtcgccg 17500745
Score = 65.9 bits (33), Expect = 3e-008
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 474 agcttctcgaagatgtcgttgatgaaggagttcatgatggacatggcct 522
||||||||||| | ||||||||||||||| |||||||| ||||||||||
Sbjct: 31022797 agcttctcgaaaacgtcgttgatgaaggatttcatgatagacatggcct 31022845
Score = 65.9 bits (33), Expect = 3e-008
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 677 cttctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcgg 733
||||||| || | |||||||||||| | ||||||||||| |||||||||||||||||
Sbjct: 17500787 cttctccgccttgggcttcttctccaccggcttcttctctgccttgggcgccatcgg 17500843
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 2835259 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 2835309
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 2817448 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 2817498
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 2869067 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 2869016
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 2854784 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 2854835
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 2671358 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 2671307
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2869040 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 2868990
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2854811 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 2854861
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2841872 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 2841922
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2683654 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 2683604
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2671331 ctcctccgcgggcttcttcgcggccggcttcttctctgccttgggcgccat 2671281
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttc 713
|||||||||||||||| ||| |||| || ||||||||||||||||
Sbjct: 2835232 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttc 2835277
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttc 713
|||||||||||||||| ||| |||| || ||||||||||||||||
Sbjct: 2817421 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttc 2817466
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 2841845 cttctcggccttctctgccgcgggctcctcctccgcgggcttcttcgcggcc 2841896
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| | | |||| || |||||||||||||||| |||||
Sbjct: 2683681 cttctcggccttctccgctgcgggctcctcctccgcgggcttcttcgcggcc 2683630
Score = 46.1 bits (23), Expect = 0.031
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 576 atcttgtacgtctcgacgctcttcttg 602
||||||||||||||||| |||||||||
Sbjct: 19618887 atcttgtacgtctcgacactcttcttg 19618913
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 559 gcaccttgaagatgtagatcttgtac 584
||||||||||||||| ||||||||||
Sbjct: 30557182 gcaccttgaagatgttgatcttgtac 30557157
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 648 cgcttctccgccctgggcttcttctc 673
|||||||||||| |||||||||||||
Sbjct: 17500785 cgcttctccgccttgggcttcttctc 17500810
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 558 agcaccttgaagatgtagatcttgta 583
|||||||||||||| |||||||||||
Sbjct: 12267585 agcaccttgaagatatagatcttgta 12267560
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 648 cgcttctccgccctgggcttcttctcggcc 677
|||||||||||| ||||||||||| |||||
Sbjct: 2869102 cgcttctccgccttgggcttcttcccggcc 2869073
Score = 42.1 bits (21), Expect = 0.48
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 647 gcgcttctccgccctgggcttcttc 671
||||||||||||| |||||||||||
Sbjct: 2835196 gcgcttctccgccttgggcttcttc 2835220
Score = 42.1 bits (21), Expect = 0.48
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 477 ttctcgaagatgtcgttgatgaaggagtt 505
|||| |||||||||||||||||| |||||
Sbjct: 78061 ttcttgaagatgtcgttgatgaatgagtt 78089
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 478 bits (241), Expect = e-132
Identities = 374/417 (89%), Gaps = 6/417 (1%)
Strand = Plus / Plus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 10535498 aacttggtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccggggagg 10535557
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 10535558 acgaggcgcaccgaggtctggatctcgcgggaggtgatggtcggcttcttgttgtagcgg 10535617
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
||||| ||||||||| || |||||||||||||| ||||||||||| |||||||||
Sbjct: 10535618 gcgagacgggcggcctcctgggcgagcttctcgaagatatcgttgatgaacgagttcatg 10535677
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| ||||||||||||||||| || || || || || |||||||||||||| ||||||||
Sbjct: 10535678 atcgacatggccttggacgatatcccgatatcgggatgcacctgcttgaggaccttgaaa 10535737
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttct---cg 626
||||||||||| || || ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 10535738 atgtagatcttataagtttcgacgctcttcttggccttcttcttccccttcttctcgccg 10535797
Query: 627 ccgccctcctt---gcccggcacgcgcttctccgccctgggcttcttctcggccttctcc 683
||||||||||| ||||||||| |||||||| ||| ||||||||||||| |||||||||
Sbjct: 10535798 ccgccctccttggcgcccggcacccgcttctcggccttgggcttcttctccgccttctcc 10535857
Query: 684 tccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcgggaattcg 740
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 10535858 tccaccggcttcttctccgcgggcttcttctccgccttgggcgccatcgggaattcg 10535914
Score = 65.9 bits (33), Expect = 3e-008
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 474 agcttctcgaagatgtcgttgatgaaggagttcatgatggacatggcct 522
||||||||||| | ||||||||||||||| |||||||| ||||||||||
Sbjct: 5470180 agcttctcgaaaacgtcgttgatgaaggatttcatgatagacatggcct 5470228
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 559 gcaccttgaagatgtagatcttgtac 584
||||||||||||||| ||||||||||
Sbjct: 5004565 gcaccttgaagatgttgatcttgtac 5004540
>dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0031D11
Length = 138108
Score = 478 bits (241), Expect = e-132
Identities = 374/417 (89%), Gaps = 6/417 (1%)
Strand = Plus / Plus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 106123 aacttggtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccggggagg 106182
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 106183 acgaggcgcaccgaggtctggatctcgcgggaggtgatggtcggcttcttgttgtagcgg 106242
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
||||| ||||||||| || |||||||||||||| ||||||||||| |||||||||
Sbjct: 106243 gcgagacgggcggcctcctgggcgagcttctcgaagatatcgttgatgaacgagttcatg 106302
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| ||||||||||||||||| || || || || || |||||||||||||| ||||||||
Sbjct: 106303 atcgacatggccttggacgatatcccgatatcgggatgcacctgcttgaggaccttgaaa 106362
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttct---cg 626
||||||||||| || || ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 106363 atgtagatcttataagtttcgacgctcttcttggccttcttcttccccttcttctcgccg 106422
Query: 627 ccgccctcctt---gcccggcacgcgcttctccgccctgggcttcttctcggccttctcc 683
||||||||||| ||||||||| |||||||| ||| ||||||||||||| |||||||||
Sbjct: 106423 ccgccctccttggcgcccggcacccgcttctcggccttgggcttcttctccgccttctcc 106482
Query: 684 tccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcgggaattcg 740
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 106483 tccaccggcttcttctccgcgggcttcttctccgccttgggcgccatcgggaattcg 106539
>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0408C03
Length = 141273
Score = 478 bits (241), Expect = e-132
Identities = 374/417 (89%), Gaps = 6/417 (1%)
Strand = Plus / Plus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 20170 aacttggtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccggggagg 20229
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 20230 acgaggcgcaccgaggtctggatctcgcgggaggtgatggtcggcttcttgttgtagcgg 20289
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
||||| ||||||||| || |||||||||||||| ||||||||||| |||||||||
Sbjct: 20290 gcgagacgggcggcctcctgggcgagcttctcgaagatatcgttgatgaacgagttcatg 20349
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| ||||||||||||||||| || || || || || |||||||||||||| ||||||||
Sbjct: 20350 atcgacatggccttggacgatatcccgatatcgggatgcacctgcttgaggaccttgaaa 20409
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttct---cg 626
||||||||||| || || ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 20410 atgtagatcttataagtttcgacgctcttcttggccttcttcttccccttcttctcgccg 20469
Query: 627 ccgccctcctt---gcccggcacgcgcttctccgccctgggcttcttctcggccttctcc 683
||||||||||| ||||||||| |||||||| ||| ||||||||||||| |||||||||
Sbjct: 20470 ccgccctccttggcgcccggcacccgcttctcggccttgggcttcttctccgccttctcc 20529
Query: 684 tccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcgggaattcg 740
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 20530 tccaccggcttcttctccgcgggcttcttctccgccttgggcgccatcgggaattcg 20586
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 478 bits (241), Expect = e-132
Identities = 374/417 (89%), Gaps = 6/417 (1%)
Strand = Plus / Plus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 10281662 aacttggtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccggggagg 10281721
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 10281722 acgaggcgcaccgaggtctggatctcgcgggaggtgatggtcggcttcttgttgtagcgg 10281781
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
||||| ||||||||| || |||||||||||||| ||||||||||| |||||||||
Sbjct: 10281782 gcgagacgggcggcctcctgggcgagcttctcgaagatatcgttgatgaacgagttcatg 10281841
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| ||||||||||||||||| || || || || || |||||||||||||| ||||||||
Sbjct: 10281842 atcgacatggccttggacgatatcccgatatcgggatgcacctgcttgaggaccttgaaa 10281901
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttct---cg 626
||||||||||| || || ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 10281902 atgtagatcttataagtttcgacgctcttcttggccttcttcttccccttcttctcgccg 10281961
Query: 627 ccgccctcctt---gcccggcacgcgcttctccgccctgggcttcttctcggccttctcc 683
||||||||||| ||||||||| |||||||| ||| ||||||||||||| |||||||||
Sbjct: 10281962 ccgccctccttggcgcccggcacccgcttctcggccttgggcttcttctccgccttctcc 10282021
Query: 684 tccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcgggaattcg 740
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 10282022 tccaccggcttcttctccgcgggcttcttctccgccttgggcgccatcgggaattcg 10282078
Score = 65.9 bits (33), Expect = 3e-008
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 474 agcttctcgaagatgtcgttgatgaaggagttcatgatggacatggcct 522
||||||||||| | ||||||||||||||| |||||||| ||||||||||
Sbjct: 5372223 agcttctcgaaaacgtcgttgatgaaggatttcatgatagacatggcct 5372271
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 559 gcaccttgaagatgtagatcttgtac 584
||||||||||||||| ||||||||||
Sbjct: 4938389 gcaccttgaagatgttgatcttgtac 4938364
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 478 bits (241), Expect = e-132
Identities = 374/417 (89%), Gaps = 6/417 (1%)
Strand = Plus / Plus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 35483383 aacttggtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccggggagg 35483442
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 35483443 acgaggcgcaccgaggtctggatctcgcgggaggtgatggtcggcttcttgttgtagcgg 35483502
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
||||| ||||||||| || |||||||||||||| ||||||||||| |||||||||
Sbjct: 35483503 gcgagacgggcggcctcctgggcgagcttctcgaagatatcgttgatgaacgagttcatg 35483562
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| ||||||||||||||||| || || || || || |||||||||||||| ||||||||
Sbjct: 35483563 atcgacatggccttggacgatatcccgatatcgggatgcacctgcttgaggaccttgaaa 35483622
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttct---cg 626
||||||||||| || || ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 35483623 atgtagatcttataagtttcgacgctcttcttggccttcttcttccccttcttctcgccg 35483682
Query: 627 ccgccctcctt---gcccggcacgcgcttctccgccctgggcttcttctcggccttctcc 683
||||||||||| ||||||||| |||||||| ||| ||||||||||||| |||||||||
Sbjct: 35483683 ccgccctccttggcgcccggcacccgcttctcggccttgggcttcttctccgccttctcc 35483742
Query: 684 tccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcgggaattcg 740
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 35483743 tccaccggcttcttctccgcgggcttcttctccgccttgggcgccatcgggaattcg 35483799
Score = 426 bits (215), Expect = e-117
Identities = 275/295 (93%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 2914337 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 2914396
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || | |||||||||||||||||||| |||||||||||
Sbjct: 2914397 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 2914456
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 2914457 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 2914516
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 2914517 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 2914576
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 2914577 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 2914631
Score = 412 bits (208), Expect = e-112
Identities = 277/300 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||| || |||||||| || |||||||||||||||||||||||||||||||| ||
Sbjct: 2929394 ctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaag 2929335
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 2929334 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 2929275
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 2929274 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 2929215
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 2929214 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 2929155
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||
Sbjct: 2929154 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 2929095
Score = 394 bits (199), Expect = e-107
Identities = 268/291 (92%)
Strand = Plus / Plus
Query: 321 gaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcg 380
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2894842 gaggaagtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcg 2894901
Query: 381 ccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttg 440
|| || ||||||||||| || | |||||||||||||||||||| |||||||||||||||
Sbjct: 2894902 ccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttg 2894961
Query: 441 ttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaag 500
|||||||| ||||||||||||| ||| | || |||||||||||||| || |||||||||
Sbjct: 2894962 ttgtagcgcgcgagcttggcggactctccggcgagcttctcgaagatatcattgatgaag 2895021
Query: 501 gagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagc 560
|||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||||
Sbjct: 2895022 gagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagc 2895081
Query: 561 accttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 2895082 accttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2895132
Score = 391 bits (197), Expect = e-106
Identities = 272/297 (91%)
Strand = Plus / Plus
Query: 315 atctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcg 374
||||||| ||| || |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 2874188 atctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcg 2874247
Query: 375 agctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggc 434
|||||||| || ||||||||||| || || |||||||||||||| ||||| |||||||||
Sbjct: 2874248 agctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtgggc 2874307
Query: 435 ttcttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttg 494
|||||||||||||| ||||||||||||| ||| | || |||||||||||||||||||||
Sbjct: 2874308 ttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgttg 2874367
Query: 495 atgaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgc 554
|||||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||
Sbjct: 2874368 atgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgc 2874427
Query: 555 ttgagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 2874428 ttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2874484
Score = 387 bits (195), Expect = e-105
Identities = 258/279 (92%)
Strand = Plus / Minus
Query: 339 acggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaaggacgaggcgc 398
||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 2743483 acggccttggtgccctcagagacggcgtgcttggcgagctcgccggggaggacgaggcgg 2743424
Query: 399 accgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgggcgagcttg 458
|| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2743423 acggaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgggcgagcttg 2743364
Query: 459 gcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatgatggacatg 518
|||| ||| | || ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2743363 gcggactctccggcgagcttctcgaagatgtcattgatgaaggagttcatgatggacatg 2743304
Query: 519 gccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaagatgtagatc 578
|||||||| ||||| || ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 2743303 gccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttgaagatgtagatc 2743244
Query: 579 ttgtacgtctcgacgctcttcttggccttcttcttcccc 617
||||| ||||||||||||||||| ||||||||| |||||
Sbjct: 2743243 ttgtaggtctcgacgctcttcttcgccttcttcctcccc 2743205
Score = 387 bits (195), Expect = e-105
Identities = 258/279 (92%)
Strand = Plus / Minus
Query: 333 ttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaaggacg 392
||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 2730980 ttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccggggaggacg 2730921
Query: 393 aggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgggcg 452
||||| || || ||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 2730920 aggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtagcgggcg 2730861
Query: 453 agcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatgatg 512
|||||||||| ||| | || |||||||||||||||||||||||||||||||||||||||
Sbjct: 2730860 agcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttcatgatg 2730801
Query: 513 gacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaagatg 572
|||||||||||||| ||||| || || || ||||| ||||||||||||||||||||||||
Sbjct: 2730800 gacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttgaagatg 2730741
Query: 573 tagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||| ||||||||||||||||| |||||||||
Sbjct: 2730740 tagatcttgtaggtctcgacgctcttcttcgccttcttc 2730702
Score = 309 bits (156), Expect = 1e-081
Identities = 263/300 (87%), Gaps = 9/300 (3%)
Strand = Plus / Plus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 17079158 aacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccggggagg 17079217
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|||||||| || || |||| |||||| |||||||| | ||||||||||||||||||||
Sbjct: 17079218 acgaggcggacggaggtctagatctcgcgggaggtggcgatgggcttcttgttgtagcgg 17079277
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
||||| | ||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 17079278 gcgaggtgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttcatg 17079337
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| |||||||||||||| ||||| || |||||||||||||||||||| || |||||||||
Sbjct: 17079338 atcgacatggccttggaggagatgccgatgtccgggtgcacctgcttcaggaccttgaag 17079397
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccg 629
|||||||| ||||||||||||||| ||||||||| |||||||||| ||||||
Sbjct: 17079398 atgtagat---------ctcgacgctcttcttcgccttcttcctccccttcttgtcgccg 17079448
Score = 103 bits (52), Expect = 2e-019
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 2901452 ctaagcggaagtaaacttggtgacggccttcgtgccctcggagacggcgtgcttggcgag 2901511
Query: 377 ctcg 380
||||
Sbjct: 2901512 ctcg 2901515
Score = 89.7 bits (45), Expect = 2e-015
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 551 ctgcttgagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttctt 610
||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||
Sbjct: 2901629 ctgcttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttgttccccttctt 2901688
Query: 611 c 611
|
Sbjct: 2901689 c 2901689
Score = 65.9 bits (33), Expect = 3e-008
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 474 agcttctcgaagatgtcgttgatgaaggagttcatgatggacatggcct 522
||||||||||| | ||||||||||||||| |||||||| ||||||||||
Sbjct: 30573944 agcttctcgaaaacgtcgttgatgaaggatttcatgatagacatggcct 30573992
Score = 65.9 bits (33), Expect = 3e-008
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 677 cttctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcgg 733
||||||| || | |||||||||||| | ||||||||||| |||||||||||||||||
Sbjct: 17079490 cttctccgccttgggcttcttctccaccggcttcttctctgccttgggcgccatcgg 17079546
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 2895249 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 2895299
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 2874601 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 2874651
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 2929004 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 2928953
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 2914721 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 2914772
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 2730612 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 2730561
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2928977 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 2928927
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2914748 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 2914798
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2901806 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 2901856
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2743094 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 2743044
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2730585 ctcctccgcgggcttcttcgcggccggcttcttctctgccttgggcgccat 2730535
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttc 713
|||||||||||||||| ||| |||| || ||||||||||||||||
Sbjct: 2895222 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttc 2895267
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttc 713
|||||||||||||||| ||| |||| || ||||||||||||||||
Sbjct: 2874574 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttc 2874619
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 2901779 cttctcggccttctctgccgcgggctcctcctccgcgggcttcttcgcggcc 2901830
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| | | |||| || |||||||||||||||| |||||
Sbjct: 2743121 cttctcggccttctccgctgcgggctcctcctccgcgggcttcttcgcggcc 2743070
Score = 46.1 bits (23), Expect = 0.031
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 576 atcttgtacgtctcgacgctcttcttg 602
||||||||||||||||| |||||||||
Sbjct: 19293777 atcttgtacgtctcgacactcttcttg 19293803
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 559 gcaccttgaagatgtagatcttgtac 584
||||||||||||||| ||||||||||
Sbjct: 30140110 gcaccttgaagatgttgatcttgtac 30140085
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 648 cgcttctccgccctgggcttcttctc 673
|||||||||||| |||||||||||||
Sbjct: 17079488 cgcttctccgccttgggcttcttctc 17079513
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 558 agcaccttgaagatgtagatcttgta 583
|||||||||||||| |||||||||||
Sbjct: 12266809 agcaccttgaagatatagatcttgta 12266784
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 648 cgcttctccgccctgggcttcttctcggcc 677
|||||||||||| ||||||||||| |||||
Sbjct: 2929039 cgcttctccgccttgggcttcttcccggcc 2929010
Score = 42.1 bits (21), Expect = 0.48
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 647 gcgcttctccgccctgggcttcttc 671
||||||||||||| |||||||||||
Sbjct: 2895186 gcgcttctccgccttgggcttcttc 2895210
Score = 42.1 bits (21), Expect = 0.48
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 477 ttctcgaagatgtcgttgatgaaggagtt 505
|||| |||||||||||||||||| |||||
Sbjct: 75413 ttcttgaagatgtcgttgatgaatgagtt 75441
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 478 bits (241), Expect = e-132
Identities = 374/417 (89%), Gaps = 6/417 (1%)
Strand = Plus / Plus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 36007445 aacttggtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccggggagg 36007504
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 36007505 acgaggcgcaccgaggtctggatctcgcgggaggtgatggtcggcttcttgttgtagcgg 36007564
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
||||| ||||||||| || |||||||||||||| ||||||||||| |||||||||
Sbjct: 36007565 gcgagacgggcggcctcctgggcgagcttctcgaagatatcgttgatgaacgagttcatg 36007624
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| ||||||||||||||||| || || || || || |||||||||||||| ||||||||
Sbjct: 36007625 atcgacatggccttggacgatatcccgatatcgggatgcacctgcttgaggaccttgaaa 36007684
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttct---cg 626
||||||||||| || || ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 36007685 atgtagatcttataagtttcgacgctcttcttggccttcttcttccccttcttctcgccg 36007744
Query: 627 ccgccctcctt---gcccggcacgcgcttctccgccctgggcttcttctcggccttctcc 683
||||||||||| ||||||||| |||||||| ||| ||||||||||||| |||||||||
Sbjct: 36007745 ccgccctccttggcgcccggcacccgcttctcggccttgggcttcttctccgccttctcc 36007804
Query: 684 tccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcgggaattcg 740
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 36007805 tccaccggcttcttctccgcgggcttcttctccgccttgggcgccatcgggaattcg 36007861
Score = 426 bits (215), Expect = e-117
Identities = 275/295 (93%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 2856598 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 2856657
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || | |||||||||||||||||||| |||||||||||
Sbjct: 2856658 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 2856717
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 2856718 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 2856777
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 2856778 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 2856837
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 2856838 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 2856892
Score = 412 bits (208), Expect = e-112
Identities = 277/300 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||| || |||||||| || |||||||||||||||||||||||||||||||| ||
Sbjct: 2871655 ctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaag 2871596
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 2871595 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 2871536
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 2871535 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 2871476
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 2871475 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 2871416
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||
Sbjct: 2871415 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 2871356
Score = 402 bits (203), Expect = e-109
Identities = 272/295 (92%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 2843659 ctaagcggaagtaaacttggtgacggccttcgtgccctcggagacggcgtgcttggcgag 2843718
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||| |||||||||||||| |||||||||||
Sbjct: 2843719 ctcgccggggaggacgaggcggacggaggtctgaatctcccgggaggtgatggtgggctt 2843778
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
|||||||||||||||||||||||||| ||| | || |||||||||||||||||||||||
Sbjct: 2843779 cttgttgtagcgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgat 2843838
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 2843839 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtgaacctgctt 2843898
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 2843899 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 2843953
Score = 394 bits (199), Expect = e-107
Identities = 268/291 (92%)
Strand = Plus / Plus
Query: 321 gaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcg 380
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2837050 gaggaagtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcg 2837109
Query: 381 ccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttg 440
|| || ||||||||||| || | |||||||||||||||||||| |||||||||||||||
Sbjct: 2837110 ccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttg 2837169
Query: 441 ttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaag 500
|||||||| ||||||||||||| ||| | || |||||||||||||| || |||||||||
Sbjct: 2837170 ttgtagcgcgcgagcttggcggactctccggcgagcttctcgaagatatcattgatgaag 2837229
Query: 501 gagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagc 560
|||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||||
Sbjct: 2837230 gagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagc 2837289
Query: 561 accttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 2837290 accttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2837340
Score = 391 bits (197), Expect = e-106
Identities = 272/297 (91%)
Strand = Plus / Plus
Query: 315 atctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcg 374
||||||| ||| || |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 2819233 atctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcg 2819292
Query: 375 agctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggc 434
|||||||| || ||||||||||| || || |||||||||||||| ||||| |||||||||
Sbjct: 2819293 agctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtgggc 2819352
Query: 435 ttcttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttg 494
|||||||||||||| ||||||||||||| ||| | || |||||||||||||||||||||
Sbjct: 2819353 ttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgttg 2819412
Query: 495 atgaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgc 554
|||||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||
Sbjct: 2819413 atgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgc 2819472
Query: 555 ttgagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 2819473 ttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2819529
Score = 387 bits (195), Expect = e-105
Identities = 258/279 (92%)
Strand = Plus / Minus
Query: 339 acggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaaggacgaggcgc 398
||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 2686241 acggccttggtgccctcagagacggcgtgcttggcgagctcgccggggaggacgaggcgg 2686182
Query: 399 accgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgggcgagcttg 458
|| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2686181 acggaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgggcgagcttg 2686122
Query: 459 gcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatgatggacatg 518
|||| ||| | || ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2686121 gcggactctccggcgagcttctcgaagatgtcattgatgaaggagttcatgatggacatg 2686062
Query: 519 gccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaagatgtagatc 578
|||||||| ||||| || ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 2686061 gccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttgaagatgtagatc 2686002
Query: 579 ttgtacgtctcgacgctcttcttggccttcttcttcccc 617
||||| ||||||||||||||||| ||||||||| |||||
Sbjct: 2686001 ttgtaggtctcgacgctcttcttcgccttcttcctcccc 2685963
Score = 387 bits (195), Expect = e-105
Identities = 258/279 (92%)
Strand = Plus / Minus
Query: 333 ttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaaggacg 392
||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 2673924 ttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccggggaggacg 2673865
Query: 393 aggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgggcg 452
||||| || || ||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 2673864 aggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtagcgggcg 2673805
Query: 453 agcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatgatg 512
|||||||||| ||| | || |||||||||||||||||||||||||||||||||||||||
Sbjct: 2673804 agcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttcatgatg 2673745
Query: 513 gacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaagatg 572
|||||||||||||| ||||| || || || ||||| ||||||||||||||||||||||||
Sbjct: 2673744 gacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttgaagatg 2673685
Query: 573 tagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||| ||||||||||||||||| |||||||||
Sbjct: 2673684 tagatcttgtaggtctcgacgctcttcttcgccttcttc 2673646
Score = 309 bits (156), Expect = 1e-081
Identities = 263/300 (87%), Gaps = 9/300 (3%)
Strand = Plus / Plus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 17421738 aacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccggggagg 17421797
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|||||||| || || |||| |||||| |||||||| | ||||||||||||||||||||
Sbjct: 17421798 acgaggcggacggaggtctagatctcgcgggaggtggcgatgggcttcttgttgtagcgg 17421857
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
||||| | ||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 17421858 gcgaggtgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttcatg 17421917
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| |||||||||||||| ||||| || |||||||||||||||||||| || |||||||||
Sbjct: 17421918 atcgacatggccttggaggagatgccgatgtccgggtgcacctgcttcaggaccttgaag 17421977
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctcgccg 629
|||||||| ||||||||||||||| ||||||||| |||||||||| ||||||
Sbjct: 17421978 atgtagat---------ctcgacgctcttcttcgccttcttcctccccttcttgtcgccg 17422028
Score = 65.9 bits (33), Expect = 3e-008
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 474 agcttctcgaagatgtcgttgatgaaggagttcatgatggacatggcct 522
||||||||||| | ||||||||||||||| |||||||| ||||||||||
Sbjct: 30942127 agcttctcgaaaacgtcgttgatgaaggatttcatgatagacatggcct 30942175
Score = 65.9 bits (33), Expect = 3e-008
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 677 cttctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcgg 733
||||||| || | |||||||||||| | ||||||||||| |||||||||||||||||
Sbjct: 17422070 cttctccgccttgggcttcttctccaccggcttcttctctgccttgggcgccatcgg 17422126
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 2837457 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 2837507
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 2819646 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 2819696
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 2871265 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 2871214
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 2856982 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 2857033
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 2673556 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 2673505
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2871238 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 2871188
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2857009 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 2857059
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2844070 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 2844120
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2685852 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 2685802
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2673529 ctcctccgcgggcttcttcgcggccggcttcttctctgccttgggcgccat 2673479
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttc 713
|||||||||||||||| ||| |||| || ||||||||||||||||
Sbjct: 2837430 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttc 2837475
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttc 713
|||||||||||||||| ||| |||| || ||||||||||||||||
Sbjct: 2819619 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttc 2819664
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 2844043 cttctcggccttctctgccgcgggctcctcctccgcgggcttcttcgcggcc 2844094
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| | | |||| || |||||||||||||||| |||||
Sbjct: 2685879 cttctcggccttctccgctgcgggctcctcctccgcgggcttcttcgcggcc 2685828
Score = 46.1 bits (23), Expect = 0.031
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 576 atcttgtacgtctcgacgctcttcttg 602
||||||||||||||||| |||||||||
Sbjct: 19540170 atcttgtacgtctcgacactcttcttg 19540196
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 559 gcaccttgaagatgtagatcttgtac 584
||||||||||||||| ||||||||||
Sbjct: 30476512 gcaccttgaagatgttgatcttgtac 30476487
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 648 cgcttctccgccctgggcttcttctc 673
|||||||||||| |||||||||||||
Sbjct: 17422068 cgcttctccgccttgggcttcttctc 17422093
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 558 agcaccttgaagatgtagatcttgta 583
|||||||||||||| |||||||||||
Sbjct: 12269803 agcaccttgaagatatagatcttgta 12269778
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 648 cgcttctccgccctgggcttcttctcggcc 677
|||||||||||| ||||||||||| |||||
Sbjct: 2871300 cgcttctccgccttgggcttcttcccggcc 2871271
Score = 42.1 bits (21), Expect = 0.48
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 647 gcgcttctccgccctgggcttcttc 671
||||||||||||| |||||||||||
Sbjct: 2837394 gcgcttctccgccttgggcttcttc 2837418
Score = 42.1 bits (21), Expect = 0.48
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 477 ttctcgaagatgtcgttgatgaaggagtt 505
|||| |||||||||||||||||| |||||
Sbjct: 80259 ttcttgaagatgtcgttgatgaatgagtt 80287
>gb|AU097670.1|AU097670 AU097670 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20637, mRNA sequence
Length = 705
Score = 470 bits (237), Expect = e-130
Identities = 373/417 (89%), Gaps = 6/417 (1%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 532 aacttggtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccggggagg 473
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 472 acgaggcgcaccgaggtctggatctcgcgggaggtgatggtcggcttcttgttgtagcgg 413
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
||||| ||||||||| || |||||||||||||| ||||||||||| |||||||||
Sbjct: 412 gcgagacgggcggcctcctgggcgagcttctcgaagatatcgttgatgaacgagttcatg 353
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| ||||||||||||||||| || || || || || |||||||||||||| ||||||||
Sbjct: 352 atcgacatggccttggacgatatcccgatatcgggatgcacctgcttgaggaccttgaaa 293
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctc---g 626
||||||||||| || || |||||||||||||||||||||||||||||||||||||| |
Sbjct: 292 atgtagatcttataagtttcgacgctcttcttggccttcttcttccccttcttctcgccg 233
Query: 627 ccgccctcctt---gcccggcacgcgcttctccgccctgggcttcttctcggccttctcc 683
||||||||||| ||||||||| |||||||| ||| ||||||||||||| |||||||||
Sbjct: 232 ccgccctccttggcgcccggcacccgcttctcggccttgggcttcttctccgccttctcc 173
Query: 684 tccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcgggaattcg 740
| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 172 ttcaccggcttcttctccgcgggcttcttctccgccttgggcgccatcgggaattcg 116
>gb|AU064314.2|AU064314 AU064314 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20637_1A, mRNA sequence
Length = 521
Score = 470 bits (237), Expect = e-130
Identities = 374/417 (89%), Gaps = 7/417 (1%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 487 aacttggtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccggggagg 428
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 427 acgaggcgcaccgaggtctggatctcgcgggaggtgatggtcggcttcttgttgtagcgg 368
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
||||| ||||||||| || |||||||||||||| ||||||||||| |||||||||
Sbjct: 367 gcgagac-ggcggcctcctgggcgagcttctcgaagatatcgttgatgaacgagttcatg 309
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| ||||||||||||||||| || || || || || |||||||||||||| ||||||||
Sbjct: 308 atcgacatggccttggacgatatcccgatatcgggatgcacctgcttgaggaccttgaaa 249
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttctc---g 626
||||||||||| || || |||||||||||||||||||||||||||||||||||||| |
Sbjct: 248 atgtagatcttataagtttcgacgctcttcttggccttcttcttccccttcttctcgccg 189
Query: 627 ccgccctcctt---gcccggcacgcgcttctccgccctgggcttcttctcggccttctcc 683
||||||||||| ||||||||| |||||||| ||| ||||||||||||| |||||||||
Sbjct: 188 ccgccctccttggcgcccggcacccgcttctcggccttgggcttcttctccgccttctcc 129
Query: 684 tccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatcgggaattcg 740
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 128 tccaccggcttcttctccgcgggcttcttctccgccttgggcgccatcgggaattcg 72
>gb|CV729931.1|CV729931 FLO--03-D14.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--03-D14,
mRNA sequence
Length = 542
Score = 458 bits (231), Expect = e-126
Identities = 361/403 (89%), Gaps = 6/403 (1%)
Strand = Plus / Minus
Query: 344 cttggtgccctcggagacggcgtgcttggcgagctcgccaggaaggacgaggcgcaccga 403
|||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 542 cttggtgccctcagagacggcgtgcttggcgagctcgccggggaggacgaggcgcaccga 483
Query: 404 agtctggatctcccgggaggttatggtgggcttcttgttgtagcgggcgagcttggcggc 463
||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct: 482 ggtctggatctcgcgggaggtgatggtcggcttcttgttgtagcgggcgagacgggcggc 423
Query: 464 ctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatgatggacatggcctt 523
||| || |||||||||||||| ||||||||||| ||||||||||| |||||||||||
Sbjct: 422 ctcctgggcgagcttctcgaagatatcgttgatgaacgagttcatgatcgacatggcctt 363
Query: 524 ggacgagataccaatgtccgggtgcacctgcttgagcaccttgaagatgtagatcttgta 583
|||||| || || || || || |||||||||||||| |||||||| ||||||||||| ||
Sbjct: 362 ggacgatatcccgatatcgggatgcacctgcttgaggaccttgaaaatgtagatcttata 303
Query: 584 cgtctcgacgctcttcttggccttcttcttccccttcttctc---gccgccctcctt--- 637
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 302 agtttcgacgctcttcttggccttcttcttccccttcttctcgccgccgccctccttggc 243
Query: 638 gcccggcacgcgcttctccgccctgggcttcttctcggccttctcctccgtcggcttctt 697
||||||||| |||||||| ||| ||||||||||||| |||||||||||| |||||||||
Sbjct: 242 gcccggcacccgcttctcggccttgggcttcttctccgccttctcctccaccggcttctt 183
Query: 698 ctccgcgggcttcttctcggccttgggcgccatcgggaattcg 740
|||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 182 ctccgcgggcttcttctccgccttgggcgccatcgggaattcg 140
>ref|NM_190523.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 420
Score = 458 bits (231), Expect = e-126
Identities = 364/407 (89%), Gaps = 6/407 (1%)
Strand = Plus / Minus
Query: 330 aacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaagg 389
|||||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 407 aacttggtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccggggagg 348
Query: 390 acgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgg 449
|||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 347 acgaggcgcaccgaggtctggatctcgcgggaggtgatggtcggcttcttgttgtagcgg 288
Query: 450 gcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatg 509
||||| ||||||||| || |||||||||||||| ||||||||||| |||||||||
Sbjct: 287 gcgagacgggcggcctcctgggcgagcttctcgaagatatcgttgatgaacgagttcatg 228
Query: 510 atggacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaag 569
|| ||||||||||||||||| || || || || || |||||||||||||| ||||||||
Sbjct: 227 atcgacatggccttggacgatatcccgatatcgggatgcacctgcttgaggaccttgaaa 168
Query: 570 atgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttcttct---cg 626
||||||||||| || || ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 167 atgtagatcttataagtttcgacgctcttcttggccttcttcttccccttcttctcgccg 108
Query: 627 ccgccctcctt---gcccggcacgcgcttctccgccctgggcttcttctcggccttctcc 683
||||||||||| ||||||||| |||||||| ||| ||||||||||||| |||||||||
Sbjct: 107 ccgccctccttggcgcccggcacccgcttctcggccttgggcttcttctccgccttctcc 48
Query: 684 tccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 47 tccaccggcttcttctccgcgggcttcttctccgccttgggcgccat 1
>gb|CV732641.1|CV732641 FLO--07-D08.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--07-D08,
mRNA sequence
Length = 545
Score = 450 bits (227), Expect = e-124
Identities = 357/399 (89%), Gaps = 6/399 (1%)
Strand = Plus / Minus
Query: 348 gtgccctcggagacggcgtgcttggcgagctcgccaggaaggacgaggcgcaccgaagtc 407
|||||||| |||||||||||||||||||||||||| || ||||||||||||||||| |||
Sbjct: 545 gtgccctcagagacggcgtgcttggcgagctcgccggggaggacgaggcgcaccgaggtc 486
Query: 408 tggatctcccgggaggttatggtgggcttcttgttgtagcgggcgagcttggcggcctcg 467
|||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||||
Sbjct: 485 tggatctcgcgggaggtgatggtcggcttcttgttgtagcgggcgagacgggcggcctcc 426
Query: 468 gcagccagcttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggac 527
|| |||||||||||||| ||||||||||| ||||||||||| |||||||||||||||
Sbjct: 425 tgggcgagcttctcgaagatatcgttgatgaacgagttcatgatcgacatggccttggac 366
Query: 528 gagataccaatgtccgggtgcacctgcttgagcaccttgaagatgtagatcttgtacgtc 587
|| || || || || || |||||||||||||| |||||||| ||||||||||| || ||
Sbjct: 365 gatatcccgatatcgggatgcacctgcttgaggaccttgaaaatgtagatcttataagtt 306
Query: 588 tcgacgctcttcttggccttcttcttccccttcttct---cgccgccctcctt---gccc 641
||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 305 tcgacgctcttcttggccttcttcttccccttcttctcgccgccgccctccttggcgccc 246
Query: 642 ggcacgcgcttctccgccctgggcttcttctcggccttctcctccgtcggcttcttctcc 701
||||| |||||||| ||| ||||||||||||| |||||||||||| |||||||||||||
Sbjct: 245 ggcacccgcttctcggccttgggcttcttctccgccttctcctccaccggcttcttctcc 186
Query: 702 gcgggcttcttctcggccttgggcgccatcgggaattcg 740
|||||||||||||| ||||||||||||||||||||||||
Sbjct: 185 gcgggcttcttctccgccttgggcgccatcgggaattcg 147
>gb|CB662156.1|CB662156 OSJNEd05O18.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05O18 5', mRNA sequence
Length = 702
Score = 426 bits (215), Expect = e-117
Identities = 275/295 (93%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 510 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 451
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || | |||||||||||||||||||| |||||||||||
Sbjct: 450 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 391
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 390 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 331
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 330 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 271
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 270 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 216
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 126 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 75
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 99 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 49
>gb|CB662157.1|CB662157 OSJNEd05O18.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05O18 3', mRNA sequence
Length = 827
Score = 426 bits (215), Expect = e-117
Identities = 275/295 (93%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 245 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 304
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || | |||||||||||||||||||| |||||||||||
Sbjct: 305 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 364
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 365 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 424
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 425 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 484
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 485 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 539
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 629 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 680
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 656 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 706
>gb|CF278594.1|CF278594 14ETL--04-I24.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--04-I24, mRNA sequence
Length = 567
Score = 426 bits (215), Expect = e-117
Identities = 275/295 (93%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 535 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 476
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || | |||||||||||||||||||| |||||||||||
Sbjct: 475 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 416
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 415 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 356
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 355 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 296
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 295 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 241
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 151 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 100
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 124 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 74
>gb|CF291164.1|CF291164 14ROOT--01-H18.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-H18, mRNA sequence
Length = 594
Score = 426 bits (215), Expect = e-117
Identities = 275/295 (93%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 200 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 259
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || | |||||||||||||||||||| |||||||||||
Sbjct: 260 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 319
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 320 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 379
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 380 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 439
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 440 gagcaccttgaagatgtagatcttgtaagtctcgacgctcttcttccccttcttc 494
>gb|CF292227.1|CF292227 14ROOT--02-P16.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-P16, mRNA sequence
Length = 623
Score = 426 bits (215), Expect = e-117
Identities = 275/295 (93%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 544 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 485
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || | |||||||||||||||||||| |||||||||||
Sbjct: 484 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 425
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 424 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 365
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 364 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 305
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 304 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 250
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 160 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 109
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 133 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 83
>gb|CF333473.1|CF333473 JMT--02-G04.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--02-G04, mRNA sequence
Length = 610
Score = 426 bits (215), Expect = e-117
Identities = 275/295 (93%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 554 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 495
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || | |||||||||||||||||||| |||||||||||
Sbjct: 494 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 435
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 434 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 375
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 374 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 315
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 314 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 260
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 170 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 119
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 143 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 93
>gb|CV731987.1|CV731987 FLO--06-E06.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--06-E06,
mRNA sequence
Length = 493
Score = 426 bits (215), Expect = e-117
Identities = 275/295 (93%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 198 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 257
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || | |||||||||||||||||||| |||||||||||
Sbjct: 258 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 317
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 318 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 377
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 378 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 437
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 438 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 492
>dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0009G03
Length = 163526
Score = 426 bits (215), Expect = e-117
Identities = 275/295 (93%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 162275 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 162334
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || | |||||||||||||||||||| |||||||||||
Sbjct: 162335 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 162394
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 162395 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 162454
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 162455 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 162514
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 162515 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 162569
Score = 402 bits (203), Expect = e-109
Identities = 272/295 (92%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 149336 ctaagcggaagtaaacttggtgacggccttcgtgccctcggagacggcgtgcttggcgag 149395
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||| |||||||||||||| |||||||||||
Sbjct: 149396 ctcgccggggaggacgaggcggacggaggtctgaatctcccgggaggtgatggtgggctt 149455
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
|||||||||||||||||||||||||| ||| | || |||||||||||||||||||||||
Sbjct: 149456 cttgttgtagcgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgat 149515
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 149516 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtgaacctgctt 149575
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 149576 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 149630
Score = 394 bits (199), Expect = e-107
Identities = 268/291 (92%)
Strand = Plus / Plus
Query: 321 gaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcg 380
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142727 gaggaagtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcg 142786
Query: 381 ccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttg 440
|| || ||||||||||| || | |||||||||||||||||||| |||||||||||||||
Sbjct: 142787 ccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttg 142846
Query: 441 ttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaag 500
|||||||| ||||||||||||| ||| | || |||||||||||||| || |||||||||
Sbjct: 142847 ttgtagcgcgcgagcttggcggactctccggcgagcttctcgaagatatcattgatgaag 142906
Query: 501 gagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagc 560
|||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||||
Sbjct: 142907 gagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagc 142966
Query: 561 accttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 142967 accttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 143017
Score = 391 bits (197), Expect = e-106
Identities = 272/297 (91%)
Strand = Plus / Plus
Query: 315 atctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcg 374
||||||| ||| || |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 124910 atctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcg 124969
Query: 375 agctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggc 434
|||||||| || ||||||||||| || || |||||||||||||| ||||| |||||||||
Sbjct: 124970 agctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtgggc 125029
Query: 435 ttcttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttg 494
|||||||||||||| ||||||||||||| ||| | || |||||||||||||||||||||
Sbjct: 125030 ttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgttg 125089
Query: 495 atgaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgc 554
|||||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||
Sbjct: 125090 atgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgc 125149
Query: 555 ttgagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 125150 ttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 125206
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 143134 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 143184
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 125323 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 125373
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 162659 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 162710
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 162686 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 162736
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 149747 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 149797
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttc 713
|||||||||||||||| ||| |||| || ||||||||||||||||
Sbjct: 143107 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttc 143152
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttc 713
|||||||||||||||| ||| |||| || ||||||||||||||||
Sbjct: 125296 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttc 125341
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 149720 cttctcggccttctctgccgcgggctcctcctccgcgggcttcttcgcggcc 149771
Score = 42.1 bits (21), Expect = 0.48
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 647 gcgcttctccgccctgggcttcttc 671
||||||||||||| |||||||||||
Sbjct: 143071 gcgcttctccgccttgggcttcttc 143095
>dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0030H07
Length = 168253
Score = 426 bits (215), Expect = e-117
Identities = 275/295 (93%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 63596 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 63655
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || | |||||||||||||||||||| |||||||||||
Sbjct: 63656 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 63715
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 63716 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 63775
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 63776 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 63835
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 63836 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 63890
Score = 412 bits (208), Expect = e-112
Identities = 277/300 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||| || |||||||| || |||||||||||||||||||||||||||||||| ||
Sbjct: 78653 ctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaag 78594
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 78593 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 78534
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 78533 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 78474
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 78473 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 78414
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||
Sbjct: 78413 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 78354
Score = 402 bits (203), Expect = e-109
Identities = 272/295 (92%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 50657 ctaagcggaagtaaacttggtgacggccttcgtgccctcggagacggcgtgcttggcgag 50716
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||| |||||||||||||| |||||||||||
Sbjct: 50717 ctcgccggggaggacgaggcggacggaggtctgaatctcccgggaggtgatggtgggctt 50776
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
|||||||||||||||||||||||||| ||| | || |||||||||||||||||||||||
Sbjct: 50777 cttgttgtagcgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgat 50836
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 50837 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtgaacctgctt 50896
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 50897 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 50951
Score = 394 bits (199), Expect = e-107
Identities = 268/291 (92%)
Strand = Plus / Plus
Query: 321 gaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcg 380
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44048 gaggaagtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcg 44107
Query: 381 ccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttg 440
|| || ||||||||||| || | |||||||||||||||||||| |||||||||||||||
Sbjct: 44108 ccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttg 44167
Query: 441 ttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaag 500
|||||||| ||||||||||||| ||| | || |||||||||||||| || |||||||||
Sbjct: 44168 ttgtagcgcgcgagcttggcggactctccggcgagcttctcgaagatatcattgatgaag 44227
Query: 501 gagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagc 560
|||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||||
Sbjct: 44228 gagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagc 44287
Query: 561 accttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 44288 accttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 44338
Score = 391 bits (197), Expect = e-106
Identities = 272/297 (91%)
Strand = Plus / Plus
Query: 315 atctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcg 374
||||||| ||| || |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 26231 atctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcg 26290
Query: 375 agctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggc 434
|||||||| || ||||||||||| || || |||||||||||||| ||||| |||||||||
Sbjct: 26291 agctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtgggc 26350
Query: 435 ttcttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttg 494
|||||||||||||| ||||||||||||| ||| | || |||||||||||||||||||||
Sbjct: 26351 ttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgttg 26410
Query: 495 atgaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgc 554
|||||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||
Sbjct: 26411 atgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgc 26470
Query: 555 ttgagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 26471 ttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 26527
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 44455 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 44505
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 26644 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 26694
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 78263 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 78212
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 63980 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 64031
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 78236 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 78186
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 64007 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 64057
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 51068 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 51118
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttc 713
|||||||||||||||| ||| |||| || ||||||||||||||||
Sbjct: 44428 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttc 44473
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttc 713
|||||||||||||||| ||| |||| || ||||||||||||||||
Sbjct: 26617 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttc 26662
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 51041 cttctcggccttctctgccgcgggctcctcctccgcgggcttcttcgcggcc 51092
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 648 cgcttctccgccctgggcttcttctcggcc 677
|||||||||||| ||||||||||| |||||
Sbjct: 78298 cgcttctccgccttgggcttcttcccggcc 78269
Score = 42.1 bits (21), Expect = 0.48
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 647 gcgcttctccgccctgggcttcttc 671
||||||||||||| |||||||||||
Sbjct: 44392 gcgcttctccgccttgggcttcttc 44416
>gb|AACV01000215.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000215, whole
genome shotgun sequence
Length = 50442
Score = 426 bits (215), Expect = e-117
Identities = 275/295 (93%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 12722 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 12781
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || | |||||||||||||||||||| |||||||||||
Sbjct: 12782 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 12841
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 12842 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 12901
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 12902 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 12961
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 12962 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 13016
Score = 412 bits (208), Expect = e-112
Identities = 277/300 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||| || |||||||| || |||||||||||||||||||||||||||||||| ||
Sbjct: 27779 ctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaag 27720
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 27719 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 27660
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 27659 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 27600
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 27599 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 27540
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||
Sbjct: 27539 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 27480
Score = 89.7 bits (45), Expect = 2e-015
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 551 ctgcttgagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttctt 610
||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||
Sbjct: 14 ctgcttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttgttccccttctt 73
Query: 611 c 611
|
Sbjct: 74 c 74
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 27389 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 27338
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 13106 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 13157
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 27362 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 27312
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 13133 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 13183
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 191 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 241
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 164 cttctcggccttctctgccgcgggctcctcctccgcgggcttcttcgcggcc 215
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 648 cgcttctccgccctgggcttcttctcggcc 677
|||||||||||| ||||||||||| |||||
Sbjct: 27424 cgcttctccgccttgggcttcttcccggcc 27395
>ref|NM_184407.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 462
Score = 426 bits (215), Expect = e-117
Identities = 275/295 (93%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 462 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 403
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || | |||||||||||||||||||| |||||||||||
Sbjct: 402 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 343
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 342 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 283
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 282 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 223
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 222 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 168
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 78 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 27
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 51 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 1
>ref|NT_036312.3| Oryza sativa (japonica cultivar-group)
Length = 10050053
Score = 426 bits (215), Expect = e-117
Identities = 275/295 (93%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 2854400 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 2854459
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || | |||||||||||||||||||| |||||||||||
Sbjct: 2854460 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 2854519
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 2854520 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 2854579
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 2854580 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 2854639
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 2854640 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 2854694
Score = 412 bits (208), Expect = e-112
Identities = 277/300 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||| || |||||||| || |||||||||||||||||||||||||||||||| ||
Sbjct: 2869457 ctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaag 2869398
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 2869397 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 2869338
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 2869337 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 2869278
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 2869277 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 2869218
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||
Sbjct: 2869217 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 2869158
Score = 402 bits (203), Expect = e-109
Identities = 272/295 (92%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 2841461 ctaagcggaagtaaacttggtgacggccttcgtgccctcggagacggcgtgcttggcgag 2841520
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||| |||||||||||||| |||||||||||
Sbjct: 2841521 ctcgccggggaggacgaggcggacggaggtctgaatctcccgggaggtgatggtgggctt 2841580
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
|||||||||||||||||||||||||| ||| | || |||||||||||||||||||||||
Sbjct: 2841581 cttgttgtagcgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgat 2841640
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 2841641 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtgaacctgctt 2841700
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 2841701 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 2841755
Score = 394 bits (199), Expect = e-107
Identities = 268/291 (92%)
Strand = Plus / Plus
Query: 321 gaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcg 380
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2834852 gaggaagtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcg 2834911
Query: 381 ccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttg 440
|| || ||||||||||| || | |||||||||||||||||||| |||||||||||||||
Sbjct: 2834912 ccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttg 2834971
Query: 441 ttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaag 500
|||||||| ||||||||||||| ||| | || |||||||||||||| || |||||||||
Sbjct: 2834972 ttgtagcgcgcgagcttggcggactctccggcgagcttctcgaagatatcattgatgaag 2835031
Query: 501 gagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagc 560
|||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||||
Sbjct: 2835032 gagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagc 2835091
Query: 561 accttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 2835092 accttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2835142
Score = 391 bits (197), Expect = e-106
Identities = 272/297 (91%)
Strand = Plus / Plus
Query: 315 atctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcg 374
||||||| ||| || |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 2817035 atctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcg 2817094
Query: 375 agctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggc 434
|||||||| || ||||||||||| || || |||||||||||||| ||||| |||||||||
Sbjct: 2817095 agctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtgggc 2817154
Query: 435 ttcttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttg 494
|||||||||||||| ||||||||||||| ||| | || |||||||||||||||||||||
Sbjct: 2817155 ttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgttg 2817214
Query: 495 atgaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgc 554
|||||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||
Sbjct: 2817215 atgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgc 2817274
Query: 555 ttgagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 2817275 ttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2817331
Score = 387 bits (195), Expect = e-105
Identities = 258/279 (92%)
Strand = Plus / Minus
Query: 339 acggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaaggacgaggcgc 398
||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 2684043 acggccttggtgccctcagagacggcgtgcttggcgagctcgccggggaggacgaggcgg 2683984
Query: 399 accgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgggcgagcttg 458
|| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2683983 acggaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgggcgagcttg 2683924
Query: 459 gcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatgatggacatg 518
|||| ||| | || ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2683923 gcggactctccggcgagcttctcgaagatgtcattgatgaaggagttcatgatggacatg 2683864
Query: 519 gccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaagatgtagatc 578
|||||||| ||||| || ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 2683863 gccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttgaagatgtagatc 2683804
Query: 579 ttgtacgtctcgacgctcttcttggccttcttcttcccc 617
||||| ||||||||||||||||| ||||||||| |||||
Sbjct: 2683803 ttgtaggtctcgacgctcttcttcgccttcttcctcccc 2683765
Score = 387 bits (195), Expect = e-105
Identities = 258/279 (92%)
Strand = Plus / Minus
Query: 333 ttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaaggacg 392
||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 2671726 ttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccggggaggacg 2671667
Query: 393 aggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgggcg 452
||||| || || ||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 2671666 aggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtagcgggcg 2671607
Query: 453 agcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatgatg 512
|||||||||| ||| | || |||||||||||||||||||||||||||||||||||||||
Sbjct: 2671606 agcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttcatgatg 2671547
Query: 513 gacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaagatg 572
|||||||||||||| ||||| || || || ||||| ||||||||||||||||||||||||
Sbjct: 2671546 gacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttgaagatg 2671487
Query: 573 tagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||| ||||||||||||||||| |||||||||
Sbjct: 2671486 tagatcttgtaggtctcgacgctcttcttcgccttcttc 2671448
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 2835259 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 2835309
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 2817448 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 2817498
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 2869067 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 2869016
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 2854784 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 2854835
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 2671358 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 2671307
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2869040 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 2868990
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2854811 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 2854861
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2841872 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 2841922
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2683654 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 2683604
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2671331 ctcctccgcgggcttcttcgcggccggcttcttctctgccttgggcgccat 2671281
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttc 713
|||||||||||||||| ||| |||| || ||||||||||||||||
Sbjct: 2835232 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttc 2835277
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttc 713
|||||||||||||||| ||| |||| || ||||||||||||||||
Sbjct: 2817421 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttc 2817466
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 2841845 cttctcggccttctctgccgcgggctcctcctccgcgggcttcttcgcggcc 2841896
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| | | |||| || |||||||||||||||| |||||
Sbjct: 2683681 cttctcggccttctccgctgcgggctcctcctccgcgggcttcttcgcggcc 2683630
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 648 cgcttctccgccctgggcttcttctcggcc 677
|||||||||||| ||||||||||| |||||
Sbjct: 2869102 cgcttctccgccttgggcttcttcccggcc 2869073
Score = 42.1 bits (21), Expect = 0.48
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 647 gcgcttctccgccctgggcttcttc 671
||||||||||||| |||||||||||
Sbjct: 2835196 gcgcttctccgccttgggcttcttc 2835220
Score = 42.1 bits (21), Expect = 0.48
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 477 ttctcgaagatgtcgttgatgaaggagtt 505
|||| |||||||||||||||||| |||||
Sbjct: 78061 ttcttgaagatgtcgttgatgaatgagtt 78089
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 426 bits (215), Expect = e-117
Identities = 275/295 (93%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 2914337 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 2914396
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || | |||||||||||||||||||| |||||||||||
Sbjct: 2914397 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 2914456
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 2914457 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 2914516
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 2914517 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 2914576
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 2914577 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 2914631
Score = 412 bits (208), Expect = e-112
Identities = 277/300 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||| || |||||||| || |||||||||||||||||||||||||||||||| ||
Sbjct: 2929394 ctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaag 2929335
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 2929334 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 2929275
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 2929274 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 2929215
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 2929214 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 2929155
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||
Sbjct: 2929154 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 2929095
Score = 394 bits (199), Expect = e-107
Identities = 268/291 (92%)
Strand = Plus / Plus
Query: 321 gaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcg 380
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2894842 gaggaagtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcg 2894901
Query: 381 ccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttg 440
|| || ||||||||||| || | |||||||||||||||||||| |||||||||||||||
Sbjct: 2894902 ccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttg 2894961
Query: 441 ttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaag 500
|||||||| ||||||||||||| ||| | || |||||||||||||| || |||||||||
Sbjct: 2894962 ttgtagcgcgcgagcttggcggactctccggcgagcttctcgaagatatcattgatgaag 2895021
Query: 501 gagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagc 560
|||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||||
Sbjct: 2895022 gagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagc 2895081
Query: 561 accttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 2895082 accttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2895132
Score = 391 bits (197), Expect = e-106
Identities = 272/297 (91%)
Strand = Plus / Plus
Query: 315 atctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcg 374
||||||| ||| || |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 2874188 atctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcg 2874247
Query: 375 agctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggc 434
|||||||| || ||||||||||| || || |||||||||||||| ||||| |||||||||
Sbjct: 2874248 agctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtgggc 2874307
Query: 435 ttcttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttg 494
|||||||||||||| ||||||||||||| ||| | || |||||||||||||||||||||
Sbjct: 2874308 ttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgttg 2874367
Query: 495 atgaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgc 554
|||||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||
Sbjct: 2874368 atgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgc 2874427
Query: 555 ttgagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 2874428 ttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2874484
Score = 387 bits (195), Expect = e-105
Identities = 258/279 (92%)
Strand = Plus / Minus
Query: 339 acggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaaggacgaggcgc 398
||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 2743483 acggccttggtgccctcagagacggcgtgcttggcgagctcgccggggaggacgaggcgg 2743424
Query: 399 accgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgggcgagcttg 458
|| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2743423 acggaggtctggatctcccgggaggtgatggtgggcttcttgttgtagcgggcgagcttg 2743364
Query: 459 gcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatgatggacatg 518
|||| ||| | || ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2743363 gcggactctccggcgagcttctcgaagatgtcattgatgaaggagttcatgatggacatg 2743304
Query: 519 gccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaagatgtagatc 578
|||||||| ||||| || ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 2743303 gccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttgaagatgtagatc 2743244
Query: 579 ttgtacgtctcgacgctcttcttggccttcttcttcccc 617
||||| ||||||||||||||||| ||||||||| |||||
Sbjct: 2743243 ttgtaggtctcgacgctcttcttcgccttcttcctcccc 2743205
Score = 387 bits (195), Expect = e-105
Identities = 258/279 (92%)
Strand = Plus / Minus
Query: 333 ttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccaggaaggacg 392
||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 2730980 ttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccggggaggacg 2730921
Query: 393 aggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttgttgtagcgggcg 452
||||| || || ||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 2730920 aggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtagcgggcg 2730861
Query: 453 agcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaaggagttcatgatg 512
|||||||||| ||| | || |||||||||||||||||||||||||||||||||||||||
Sbjct: 2730860 agcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttcatgatg 2730801
Query: 513 gacatggccttggacgagataccaatgtccgggtgcacctgcttgagcaccttgaagatg 572
|||||||||||||| ||||| || || || ||||| ||||||||||||||||||||||||
Sbjct: 2730800 gacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttgaagatg 2730741
Query: 573 tagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||| ||||||||||||||||| |||||||||
Sbjct: 2730740 tagatcttgtaggtctcgacgctcttcttcgccttcttc 2730702
Score = 103 bits (52), Expect = 2e-019
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 2901452 ctaagcggaagtaaacttggtgacggccttcgtgccctcggagacggcgtgcttggcgag 2901511
Query: 377 ctcg 380
||||
Sbjct: 2901512 ctcg 2901515
Score = 89.7 bits (45), Expect = 2e-015
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 551 ctgcttgagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttctt 610
||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||
Sbjct: 2901629 ctgcttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttgttccccttctt 2901688
Query: 611 c 611
|
Sbjct: 2901689 c 2901689
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 2895249 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 2895299
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 2874601 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 2874651
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 2929004 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 2928953
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 2914721 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 2914772
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 2730612 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 2730561
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2928977 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 2928927
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2914748 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 2914798
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2901806 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 2901856
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2743094 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 2743044
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 2730585 ctcctccgcgggcttcttcgcggccggcttcttctctgccttgggcgccat 2730535
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttc 713
|||||||||||||||| ||| |||| || ||||||||||||||||
Sbjct: 2895222 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttc 2895267
Score = 52.0 bits (26), Expect = 5e-004
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttc 713
|||||||||||||||| ||| |||| || ||||||||||||||||
Sbjct: 2874574 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttc 2874619
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 2901779 cttctcggccttctctgccgcgggctcctcctccgcgggcttcttcgcggcc 2901830
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| | | |||| || |||||||||||||||| |||||
Sbjct: 2743121 cttctcggccttctccgctgcgggctcctcctccgcgggcttcttcgcggcc 2743070
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 648 cgcttctccgccctgggcttcttctcggcc 677
|||||||||||| ||||||||||| |||||
Sbjct: 2929039 cgcttctccgccttgggcttcttcccggcc 2929010
Score = 42.1 bits (21), Expect = 0.48
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 647 gcgcttctccgccctgggcttcttc 671
||||||||||||| |||||||||||
Sbjct: 2895186 gcgcttctccgccttgggcttcttc 2895210
Score = 42.1 bits (21), Expect = 0.48
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 477 ttctcgaagatgtcgttgatgaaggagtt 505
|||| |||||||||||||||||| |||||
Sbjct: 75413 ttcttgaagatgtcgttgatgaatgagtt 75441
>gb|CF291163.1|CF291163 14ROOT--01-H18.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-H18, mRNA sequence
Length = 532
Score = 418 bits (211), Expect = e-114
Identities = 271/291 (93%)
Strand = Plus / Minus
Query: 321 gaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcg 380
|||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 532 gaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcg 473
Query: 381 ccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttg 440
|| || ||||||||||| || | |||||||||||||||||||| |||||||||||||||
Sbjct: 472 ccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttg 413
Query: 441 ttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaag 500
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 412 ttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaag 353
Query: 501 gagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagc 560
|||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||||
Sbjct: 352 gagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagc 293
Query: 561 accttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 292 accttgaagatgtagatcttgtaagtctcgacgctcttcttccccttcttc 242
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 152 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 101
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 125 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 75
>gb|CF292040.1|CF292040 14ROOT--02-L10.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-L10, mRNA sequence
Length = 624
Score = 418 bits (211), Expect = e-114
Identities = 274/295 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 536 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 477
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || | ||||||| |||||||||||| |||||||||||
Sbjct: 476 ctcgccggggaggacgaggcggacggcggtctggacctcccgggaggtgatggtgggctt 417
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 416 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 357
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 356 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 297
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 296 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 242
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 152 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 101
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 125 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 75
>gb|CF292148.1|CF292148 14ROOT--02-N19.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-N19, mRNA sequence
Length = 549
Score = 418 bits (211), Expect = e-114
Identities = 271/291 (93%)
Strand = Plus / Minus
Query: 321 gaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcg 380
|||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 549 gaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcg 490
Query: 381 ccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttg 440
|| || ||||||||||| || | |||||||||||||||||||| |||||||||||||||
Sbjct: 489 ccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttg 430
Query: 441 ttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaag 500
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 429 ttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaag 370
Query: 501 gagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagc 560
|||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||||
Sbjct: 369 gagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagc 310
Query: 561 accttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 309 accttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 259
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 169 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 118
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 142 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 92
>gb|AU031069.1|AU031069 AU031069 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60725_2Z, mRNA sequence
Length = 441
Score = 414 bits (209), Expect = e-113
Identities = 273/295 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 322 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 263
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || | |||||||||||||||||||| |||||||||||
Sbjct: 262 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 203
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 202 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 143
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 142 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 83
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
|||||||||| |||||||||||||||| ||||||| ||||||||| ||||||||
Sbjct: 82 gagcaccttgnagatgtagatcttgtaggtctcgangctcttcttccccttcttc 28
>gb|AU070936.1|AU070936 AU070936 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10485_1A, mRNA sequence
Length = 712
Score = 412 bits (208), Expect = e-112
Identities = 277/300 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||| || |||||||| || |||||||||||||||||||||||||||||||| ||
Sbjct: 534 ctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaag 475
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 474 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 415
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 414 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 355
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 354 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 295
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||
Sbjct: 294 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 235
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 116 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 66
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 648 cgcttctccgccctgggcttcttctcggcc 677
|||||||||||| ||||||||||| |||||
Sbjct: 179 cgcttctccgccttgggcttcttcccggcc 150
>gb|CA998848.1|CA998848 S345M_G12 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 564
Score = 412 bits (208), Expect = e-112
Identities = 277/300 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||| || |||||||| || |||||||||||||||||||||||||||||||| ||
Sbjct: 349 ctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaag 290
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 289 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 230
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 229 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 170
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 169 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 110
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||
Sbjct: 109 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 50
>gb|BP184585.1|BP184585 BP184585 pNS rice panicle cDNA, flowering stage Oryza sativa
(japonica cultivar-group) cDNA clone 13YPG059, mRNA
sequence
Length = 626
Score = 412 bits (208), Expect = e-112
Identities = 277/300 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||| || |||||||| || |||||||||||||||||||||||||||||||| ||
Sbjct: 531 ctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaag 472
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 471 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 412
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 411 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 352
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 351 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 292
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||
Sbjct: 291 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 232
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 141 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 90
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 114 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 64
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 648 cgcttctccgccctgggcttcttctcggcc 677
|||||||||||| ||||||||||| |||||
Sbjct: 176 cgcttctccgccttgggcttcttcccggcc 147
>gb|BP184926.1|BP184926 BP184926 pNS rice callus cDNA Oryza sativa (japonica
cultivar-group) cDNA clone 23C4AG024, mRNA sequence
Length = 663
Score = 412 bits (208), Expect = e-112
Identities = 277/300 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||| || |||||||| || |||||||||||||||||||||||||||||||| ||
Sbjct: 543 ctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaag 484
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 483 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 424
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 423 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 364
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 363 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 304
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||
Sbjct: 303 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 244
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 153 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 102
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 126 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 76
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 648 cgcttctccgccctgggcttcttctcggcc 677
|||||||||||| ||||||||||| |||||
Sbjct: 188 cgcttctccgccttgggcttcttcccggcc 159
>ref|NM_184409.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 468
Score = 412 bits (208), Expect = e-112
Identities = 277/300 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||| || |||||||| || |||||||||||||||||||||||||||||||| ||
Sbjct: 468 ctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaag 409
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 408 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 349
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 348 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 289
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 288 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 229
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||
Sbjct: 228 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 169
Score = 56.0 bits (28), Expect = 3e-005
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
|||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 78 cttctcggccttctccgccgcgggctcctcctccgcgggcttcttcgcggcc 27
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 51 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 1
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 648 cgcttctccgccctgggcttcttctcggcc 677
|||||||||||| ||||||||||| |||||
Sbjct: 113 cgcttctccgccttgggcttcttcccggcc 84
>gb|CV720821.1|CV720821 YBH--01-P10.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--01-P10, mRNA sequence
Length = 455
Score = 410 bits (207), Expect = e-112
Identities = 334/375 (89%), Gaps = 6/375 (1%)
Strand = Plus / Minus
Query: 372 gcgagctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtg 431
||||||||||| || ||||||||||||||||| ||||||||||| |||||||| |||||
Sbjct: 455 gcgagctcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtc 396
Query: 432 ggcttcttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcg 491
||||||||||||||||||||||| ||||||||| || |||||||||||||| |||
Sbjct: 395 ggcttcttgttgtagcgggcgagacgggcggcctcctgggcgagcttctcgaagatatcg 336
Query: 492 ttgatgaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacc 551
|||||||| ||||||||||| ||||||||||||||||| || || || || || ||||||
Sbjct: 335 ttgatgaacgagttcatgatcgacatggccttggacgatatcccgatatcgggatgcacc 276
Query: 552 tgcttgagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
|||||||| |||||||| ||||||||||| || || ||||||||||||||||||||||||
Sbjct: 275 tgcttgaggaccttgaaaatgtagatcttataagtttcgacgctcttcttggccttcttc 216
Query: 612 ttccccttcttctcg---ccgccctcctt---gcccggcacgcgcttctccgccctgggc 665
||||||||||||||| ||||||||||| ||||||||| |||||||| ||| |||||
Sbjct: 215 ttccccttcttctcgccgccgccctccttggcgcccggcacccgcttctcggccttgggc 156
Query: 666 ttcttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggccttgggc 725
|||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct: 155 ttcttctccgccttctcctccaccggcttcttctccgcgggcttcttctccgccttgggc 96
Query: 726 gccatcgggaattcg 740
|||||||||||||||
Sbjct: 95 gccatcgggaattcg 81
>gb|CV732516.1|CV732516 FLO--07-A10.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--07-A10,
mRNA sequence
Length = 509
Score = 406 bits (205), Expect = e-111
Identities = 259/277 (93%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 233 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 292
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || | |||||||||||||||||||| |||||||||||
Sbjct: 293 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 352
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 353 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 412
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 413 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 472
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacg 593
||||||||||||||||||||||||||| |||||||||
Sbjct: 473 gagcaccttgaagatgtagatcttgtaggtctcgacg 509
>gb|AU097673.1|AU097673 AU097673 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30833, mRNA sequence
Length = 697
Score = 404 bits (204), Expect = e-110
Identities = 276/300 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ctaagcggaggtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgag 427
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 426 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 367
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 366 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 307
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 306 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 247
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||| ||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||||
Sbjct: 246 gagaaccttgaagatgtagatcttgtaggtctccacgctcttcttccccttcttcctccc 187
Score = 44.1 bits (22), Expect = 0.12
Identities = 37/41 (90%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 690 ggcttcttctccgcgggcttcttctcggccttgggcgccat 730
||||||||| |||||| ||||||||| | ||||||||||||
Sbjct: 71 ggcttcttcgccgcgg-cttcttctccgncttgggcgccat 32
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08,
complete sequence
Length = 119500
Score = 404 bits (204), Expect = e-110
Identities = 276/300 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 27089 ctaagcggaggtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgag 27030
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 27029 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 26970
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 26969 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 26910
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 26909 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 26850
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||| ||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||||
Sbjct: 26849 gagaaccttgaagatgtagatcttgtaggtctccacgctcttcttccccttcttcctccc 26790
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 26681 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 26631
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10,
complete sequence
Length = 187034
Score = 404 bits (204), Expect = e-110
Identities = 276/300 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 176407 ctaagcggaggtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgag 176348
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 176347 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 176288
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 176287 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 176228
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 176227 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 176168
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||| ||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||||
Sbjct: 176167 gagaaccttgaagatgtagatcttgtaggtctccacgctcttcttccccttcttcctccc 176108
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 175999 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 175949
>gb|AACV01012743.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012743, whole
genome shotgun sequence
Length = 27501
Score = 404 bits (204), Expect = e-110
Identities = 276/300 (92%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 19987 ctaagcggaggtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgag 20046
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 20047 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 20106
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 20107 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 20166
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 20167 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 20226
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||| ||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||||
Sbjct: 20227 gagaaccttgaagatgtagatcttgtaggtctccacgctcttcttccccttcttcctccc 20286
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 20395 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 20445
>ref|XM_475912.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 459
Score = 404 bits (204), Expect = e-110
Identities = 276/300 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ctaagcggaggtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgag 400
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 399 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 340
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 339 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 280
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 279 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 220
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||| ||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||||
Sbjct: 219 gagaaccttgaagatgtagatcttgtaggtctccacgctcttcttccccttcttcctccc 160
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 51 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 1
>ref|NT_107222.1| Oryza sativa (japonica cultivar-group)
Length = 1298239
Score = 404 bits (204), Expect = e-110
Identities = 276/300 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 27089 ctaagcggaggtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgag 27030
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 27029 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 26970
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 26969 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 26910
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 26909 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 26850
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||| ||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||||
Sbjct: 26849 gagaaccttgaagatgtagatcttgtaggtctccacgctcttcttccccttcttcctccc 26790
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 26681 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 26631
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 474 agcttctcgaagatgtcgttgatgaa 499
||||||||| ||||||||||||||||
Sbjct: 991860 agcttctcggagatgtcgttgatgaa 991885
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 404 bits (204), Expect = e-110
Identities = 276/300 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 10827238 ctaagcggaggtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgag 10827179
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 10827178 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 10827119
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 10827118 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 10827059
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 10827058 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 10826999
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||| ||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||||
Sbjct: 10826998 gagaaccttgaagatgtagatcttgtaggtctccacgctcttcttccccttcttcctccc 10826939
Score = 297 bits (150), Expect = 5e-078
Identities = 264/302 (87%)
Strand = Plus / Minus
Query: 321 gaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcg 380
||||| || |||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4861009 gaggaggtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcg 4860950
Query: 381 ccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttg 440
|| || |||||||| || || || ||||||||||| |||||||| || ||||||||||||
Sbjct: 4860949 ccggggaggacgagacgaacagaggtctggatctcgcgggaggtgattgtgggcttcttg 4860890
Query: 441 ttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaag 500
||||| | ||| ||| | |||||||| | ||||||||||| |||||||||| ||||
Sbjct: 4860889 ttgtacctggcaagcctcgcggcctcctgctcgagcttctcgaaaatgtcgttgacgaag 4860830
Query: 501 gagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagc 560
|| ||||||||||||||||||||||| ||||| || ||||| || |||||||||||||||
Sbjct: 4860829 gaattcatgatggacatggccttggaggagattcctatgtctggatgcacctgcttgagc 4860770
Query: 561 accttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttc 620
||||||||||||||||| || || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 4860769 accttgaagatgtagattttataggtctccacgcttttcttcgccttcttcttccccttc 4860710
Query: 621 tt 622
||
Sbjct: 4860709 tt 4860708
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 10826830 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 10826780
Score = 48.1 bits (24), Expect = 0.008
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 676 ccttctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatc 731
|||||||||| | ||||||||||| || ||||||||||| ||||| ||| |||||
Sbjct: 4860636 ccttctcctctgctggcttcttctctgccggcttcttctccgccttcggcaccatc 4860581
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 560 caccttgaagatgtagatcttgt 582
|||||||||||||||||||||||
Sbjct: 7877597 caccttgaagatgtagatcttgt 7877619
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 474 agcttctcgaagatgtcgttgatgaa 499
||||||||| ||||||||||||||||
Sbjct: 11772115 agcttctcggagatgtcgttgatgaa 11772140
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 474 agcttctcgaagatgtcgttgatgaa 499
|||||||||||||||||||| |||||
Sbjct: 849357 agcttctcgaagatgtcgttaatgaa 849332
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 404 bits (204), Expect = e-110
Identities = 276/300 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 28127551 ctaagcggaggtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgag 28127492
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 28127491 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 28127432
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 28127431 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 28127372
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 28127371 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 28127312
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||| ||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||||
Sbjct: 28127311 gagaaccttgaagatgtagatcttgtaggtctccacgctcttcttccccttcttcctccc 28127252
Score = 297 bits (150), Expect = 5e-078
Identities = 264/302 (87%)
Strand = Plus / Minus
Query: 321 gaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcg 380
||||| || |||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 22161322 gaggaggtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcg 22161263
Query: 381 ccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttg 440
|| || |||||||| || || || ||||||||||| |||||||| || ||||||||||||
Sbjct: 22161262 ccggggaggacgagacgaacagaggtctggatctcgcgggaggtgattgtgggcttcttg 22161203
Query: 441 ttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaag 500
||||| | ||| ||| | |||||||| | ||||||||||| |||||||||| ||||
Sbjct: 22161202 ttgtacctggcaagcctcgcggcctcctgctcgagcttctcgaaaatgtcgttgacgaag 22161143
Query: 501 gagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagc 560
|| ||||||||||||||||||||||| ||||| || ||||| || |||||||||||||||
Sbjct: 22161142 gaattcatgatggacatggccttggaggagattcctatgtctggatgcacctgcttgagc 22161083
Query: 561 accttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttc 620
||||||||||||||||| || || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 22161082 accttgaagatgtagattttataggtctccacgcttttcttcgccttcttcttccccttc 22161023
Query: 621 tt 622
||
Sbjct: 22161022 tt 22161021
Score = 67.9 bits (34), Expect = 8e-009
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 477 ttctcgaagatgtcgttgatgaaggagttcatgatgga 514
|||||||||||||| |||||||||||||||||||||||
Sbjct: 8223364 ttctcgaagatgtcattgatgaaggagttcatgatgga 8223401
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 28127143 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 28127093
Score = 52.0 bits (26), Expect = 5e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 474 agcttctcgaagatgtcgttgatgaa 499
||||||||||||||||||||||||||
Sbjct: 3719856 agcttctcgaagatgtcgttgatgaa 3719881
Score = 50.1 bits (25), Expect = 0.002
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 550 cctgcttgagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttg 602
||||||| ||||||||||||||||||| ||||| ||||| | |||||||||
Sbjct: 6814313 cctgcttctgcaccttgaagatgtagatattgtaggtctccatactcttcttg 6814365
Score = 48.1 bits (24), Expect = 0.008
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 676 ccttctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatc 731
|||||||||| | ||||||||||| || ||||||||||| ||||| ||| |||||
Sbjct: 22160949 ccttctcctctgctggcttcttctctgccggcttcttctccgccttcggcaccatc 22160894
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 560 caccttgaagatgtagatcttgt 582
|||||||||||||||||||||||
Sbjct: 25177910 caccttgaagatgtagatcttgt 25177932
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 474 agcttctcgaagatgtcgttgatgaa 499
||||||||| ||||||||||||||||
Sbjct: 29072428 agcttctcggagatgtcgttgatgaa 29072453
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 474 agcttctcgaagatgtcgttgatgaa 499
|||||||||||||||||||| |||||
Sbjct: 18149670 agcttctcgaagatgtcgttaatgaa 18149645
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 474 agcttctcgaagatgtcgttgatgaa 499
||||||||||||||||| ||||||||
Sbjct: 6128351 agcttctcgaagatgtctttgatgaa 6128326
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 404 bits (204), Expect = e-110
Identities = 276/300 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 28392165 ctaagcggaggtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgag 28392106
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||||||||| |||||||| |||||||||||
Sbjct: 28392105 ctcgccggggaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 28392046
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 28392045 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 28391986
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 28391985 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 28391926
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccc 616
||| ||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||||
Sbjct: 28391925 gagaaccttgaagatgtagatcttgtaggtctccacgctcttcttccccttcttcctccc 28391866
Score = 297 bits (150), Expect = 5e-078
Identities = 264/302 (87%)
Strand = Plus / Minus
Query: 321 gaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcg 380
||||| || |||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 22480467 gaggaggtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcg 22480408
Query: 381 ccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggcttcttg 440
|| || |||||||| || || || ||||||||||| |||||||| || ||||||||||||
Sbjct: 22480407 ccggggaggacgagacgaacagaggtctggatctcgcgggaggtgattgtgggcttcttg 22480348
Query: 441 ttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgatgaag 500
||||| | ||| ||| | |||||||| | ||||||||||| |||||||||| ||||
Sbjct: 22480347 ttgtacctggcaagcctcgcggcctcctgctcgagcttctcgaaaatgtcgttgacgaag 22480288
Query: 501 gagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgcttgagc 560
|| ||||||||||||||||||||||| ||||| || ||||| || |||||||||||||||
Sbjct: 22480287 gaattcatgatggacatggccttggaggagattcctatgtctggatgcacctgcttgagc 22480228
Query: 561 accttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttcttccccttc 620
||||||||||||||||| || || ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 22480227 accttgaagatgtagattttataggtctccacgcttttcttcgccttcttcttccccttc 22480168
Query: 621 tt 622
||
Sbjct: 22480167 tt 22480166
Score = 61.9 bits (31), Expect = 5e-007
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| |||| ||||||||||| ||||||||||||||
Sbjct: 28391757 ctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 28391707
Score = 52.0 bits (26), Expect = 5e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 474 agcttctcgaagatgtcgttgatgaa 499
||||||||||||||||||||||||||
Sbjct: 3720744 agcttctcgaagatgtcgttgatgaa 3720769
Score = 50.1 bits (25), Expect = 0.002
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 550 cctgcttgagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttg 602
||||||| ||||||||||||||||||| ||||| ||||| | |||||||||
Sbjct: 6896155 cctgcttctgcaccttgaagatgtagatattgtaggtctccatactcttcttg 6896207
Score = 48.1 bits (24), Expect = 0.008
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 676 ccttctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccatc 731
|||||||||| | ||||||||||| || ||||||||||| ||||| ||| |||||
Sbjct: 22480094 ccttctcctctgctggcttcttctctgccggcttcttctccgccttcggcaccatc 22480039
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 560 caccttgaagatgtagatcttgt 582
|||||||||||||||||||||||
Sbjct: 25447111 caccttgaagatgtagatcttgt 25447133
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 474 agcttctcgaagatgtcgttgatgaa 499
||||||||| ||||||||||||||||
Sbjct: 29356936 agcttctcggagatgtcgttgatgaa 29356961
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 474 agcttctcgaagatgtcgttgatgaa 499
|||||||||||||||||||| |||||
Sbjct: 18422088 agcttctcgaagatgtcgttaatgaa 18422063
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 474 agcttctcgaagatgtcgttgatgaa 499
||||||||||||||||| ||||||||
Sbjct: 6238958 agcttctcgaagatgtctttgatgaa 6238933
>gb|AU082356.1|AU082356 AU082356 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C53106, mRNA sequence
Length = 583
Score = 402 bits (203), Expect = e-109
Identities = 272/295 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 445 ctaagcggaagtaaacttggtgacggccttcgtgccctcggagacggcgtgcttggcgag 386
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||| |||||||||||||| |||||||||||
Sbjct: 385 ctcgccggggaggacgaggcggacggaggtctgaatctcccgggaggtgatggtgggctt 326
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
|||||||||||||||||||||||||| ||| | || |||||||||||||||||||||||
Sbjct: 325 cttgttgtagcgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgat 266
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 265 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtgaacctgctt 206
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 205 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 151
>gb|AU097668.1|AU097668 AU097668 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C53335, mRNA sequence
Length = 598
Score = 402 bits (203), Expect = e-109
Identities = 272/295 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 461 ctaagcggaagtaaacttggtgacggccttcgtgccctcggagacggcgtgcttggcgag 402
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||| |||||||||||||| |||||||||||
Sbjct: 401 ctcgccggggaggacgaggcggacggaggtctgaatctcccgggaggtgatggtgggctt 342
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
|||||||||||||||||||||||||| ||| | || |||||||||||||||||||||||
Sbjct: 341 cttgttgtagcgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgat 282
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 281 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtgaacctgctt 222
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 221 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 167
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 77 cttctcggccttctctgccgcgggctcctcctccgcgggcttcttcgcggcc 26
>gb|CF290908.1|CF290908 14ROOT--01-B24.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-B24, mRNA sequence
Length = 531
Score = 402 bits (203), Expect = e-109
Identities = 272/295 (92%)
Strand = Plus / Plus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
|||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 214 ctaagaggaagtgaacttggggacggccttggtgccctcggagacggcgtgcttggcaag 273
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||| ||||| || | |||||||||||||||||||| |||||||||||
Sbjct: 274 ctcgccggggaggacaaggcggacggcggtctggatctcccgggaggtgatggtgggctt 333
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 334 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 393
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 394 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 453
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
|||||||||||||||||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 454 gagcaccttgaagatgtaaatcttgtaggtctcgacgctcttcttccccttcttc 508
>gb|CF292090.1|CF292090 14ROOT--02-M12.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-M12, mRNA sequence
Length = 727
Score = 402 bits (203), Expect = e-109
Identities = 272/295 (92%)
Strand = Plus / Minus
Query: 317 ctaagaggaagtaaacttggtaacggccttggtgccctcggagacggcgtgcttggcgag 376
||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 553 ctaagcggaagtaaacttggtgacggccttcgtgccctcggagacggcgtgcttggcgag 494
Query: 377 ctcgccaggaaggacgaggcgcaccgaagtctggatctcccgggaggttatggtgggctt 436
|||||| || ||||||||||| || || ||||| |||||||||||||| |||||||||||
Sbjct: 493 ctcgccggggaggacgaggcggacggaggtctgaatctcccgggaggtgatggtgggctt 434
Query: 437 cttgttgtagcgggcgagcttggcggcctcggcagccagcttctcgaagatgtcgttgat 496
|||||||||||||||||||||||||| ||| | || |||||||||||||||||||||||
Sbjct: 433 cttgttgtagcgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgat 374
Query: 497 gaaggagttcatgatggacatggccttggacgagataccaatgtccgggtgcacctgctt 556
|||||||||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 373 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtgaacctgctt 314
Query: 557 gagcaccttgaagatgtagatcttgtacgtctcgacgctcttcttggccttcttc 611
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 313 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 259
Score = 54.0 bits (27), Expect = 1e-004
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 680 ctcctccgtcggcttcttctccgcgggcttcttctcggccttgggcgccat 730
|||||||| ||||||||| | || ||||||||||| ||||||||||||||
Sbjct: 142 ctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 92
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 668 cttctcggccttctcctccgtcggcttcttctccgcgggcttcttctcggcc 719
||||||||||||||| ||| |||| || |||||||||||||||| |||||
Sbjct: 169 cttctcggccttctctgccgcgggctcctcctccgcgggcttcttcgcggcc 118
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,394,930
Number of Sequences: 438736
Number of extensions: 1394930
Number of successful extensions: 13512
Number of sequences better than 0.5: 646
Number of HSP's better than 0.5 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7779
Number of HSP's gapped (non-prelim): 5385
length of query: 842
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 821
effective length of database: 2,791,206,460
effective search space: 2291580503660
effective search space used: 2291580503660
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)