BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.287
(857 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU097673.1|AU097673 AU097673 Rice panicle shorter than 3... 474 e-131
gb|AC098832.3| Oryza sativa (japonica cultivar-group) chrom... 474 e-131
gb|AC104284.2| Oryza sativa (japonica cultivar-group) chrom... 474 e-131
gb|AACV01012743.1| Oryza sativa (japonica cultivar-group) c... 474 e-131
ref|NT_107222.1| Oryza sativa (japonica cultivar-group) 474 e-131
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 474 e-131
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 474 e-131
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 474 e-131
gb|CO436072.1|CO436072 OsMR994 5MT resistant rice mutant cD... 470 e-130
ref|XM_475912.1| Oryza sativa (japonica cultivar-group), p... 470 e-130
gb|AU032007.1|AU032007 AU032007 Rice root Oryza sativa (jap... 462 e-127
gb|CF307934.1|CF307934 ABF--01-I21.b1 ABF3-overexpressing t... 462 e-127
gb|CA998897.1|CA998897 S345N_D05 Rice cold stress germinati... 460 e-127
gb|CA755827.1|CA755827 BR030029000_PLATE_B12_90_096.ab1 OA ... 456 e-126
gb|CF290947.1|CF290947 14ROOT--01-D01.b1 Rice root plasmid ... 450 e-124
gb|CB662156.1|CB662156 OSJNEd05O18.f OSJNEd Oryza sativa (j... 448 e-123
gb|CB662157.1|CB662157 OSJNEd05O18.r OSJNEd Oryza sativa (j... 448 e-123
gb|CF278594.1|CF278594 14ETL--04-I24.b1 Rice etiolated leaf... 448 e-123
gb|CF291164.1|CF291164 14ROOT--01-H18.g1 Rice root plasmid ... 448 e-123
gb|CF292227.1|CF292227 14ROOT--02-P16.b1 Rice root plasmid ... 448 e-123
gb|CF333473.1|CF333473 JMT--02-G04.b1 AtJMT-overexpressing ... 448 e-123
gb|CV731987.1|CV731987 FLO--06-E06.g1 Rice flower lambda ph... 448 e-123
dbj|AP002522.1| Oryza sativa (japonica cultivar-group) geno... 448 e-123
dbj|AP003045.2| Oryza sativa (japonica cultivar-group) geno... 448 e-123
gb|AACV01000215.1| Oryza sativa (japonica cultivar-group) c... 448 e-123
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 448 e-123
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 448 e-123
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 448 e-123
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 448 e-123
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 448 e-123
gb|CF291163.1|CF291163 14ROOT--01-H18.b1 Rice root plasmid ... 442 e-121
gb|CF292148.1|CF292148 14ROOT--02-N19.b1 Rice root plasmid ... 442 e-121
gb|CV730234.1|CV730234 FLO--03-K21.g1 Rice flower lambda ph... 442 e-121
dbj|AP002540.2| Oryza sativa (japonica cultivar-group) geno... 442 e-121
gb|AACV01000194.1| Oryza sativa (japonica cultivar-group) c... 442 e-121
ref|NM_184407.1| Oryza sativa (japonica cultivar-group), mRNA 442 e-121
gb|CA998848.1|CA998848 S345M_G12 Rice cold stress germinati... 440 e-121
gb|CF292040.1|CF292040 14ROOT--02-L10.b1 Rice root plasmid ... 440 e-121
gb|BP184585.1|BP184585 BP184585 pNS rice panicle cDNA, flow... 440 e-121
gb|BP184926.1|BP184926 BP184926 pNS rice callus cDNA Oryza ... 440 e-121
gb|AU031294.1|AU031294 AU031294 Rice cDNA from immature lea... 438 e-120
gb|AU070936.1|AU070936 AU070936 Rice cDNA from young root O... 438 e-120
ref|NM_184371.1| Oryza sativa (japonica cultivar-group), mRNA 438 e-120
ref|NM_184409.1| Oryza sativa (japonica cultivar-group), mRNA 438 e-120
gb|AU031069.1|AU031069 AU031069 Rice cDNA from immature lea... 436 e-120
gb|CB670862.1|CB670862 OSJNEe04C16.f OSJNEe Oryza sativa (j... 434 e-119
gb|CV730588.1|CV730588 FLO--04-D06.b1 Rice flower lambda ph... 434 e-119
gb|AACV01000195.1| Oryza sativa (japonica cultivar-group) c... 434 e-119
gb|AU031202.1|AU031202 AU031202 Rice cDNA from immature lea... 432 e-118
gb|AU092503.1|AU092503 AU092503 Rice callus Oryza sativa (j... 432 e-118
gb|CF296221.1|CF296221 30DGS--06-H23.b1 Rice leaf plasmid c... 432 e-118
gb|AACV01000214.1| Oryza sativa (japonica cultivar-group) c... 432 e-118
gb|AU082408.1|AU082408 AU082408 Rice panicle shorter than 3... 430 e-118
gb|AU097679.1|AU097679 AU097679 Rice root Oryza sativa (jap... 430 e-118
gb|CV728820.1|CV728820 FLO--01-F13.b1 Rice flower lambda ph... 430 e-118
gb|AACV01000209.1| Oryza sativa (japonica cultivar-group) c... 430 e-118
ref|NM_184374.1| Oryza sativa (japonica cultivar-group), mRNA 430 e-118
ref|NM_184399.1| Oryza sativa (japonica cultivar-group), mRNA 430 e-118
gb|AU029435.1|AU029435 AU029435 Rice panicle shorter than 3... 428 e-117
gb|AU058394.1|AU058394 AU058394 Oryza sativa Nipponbare imm... 428 e-117
gb|AU057603.1|AU057603 AU057603 Oryza sativa mature leaf Ni... 428 e-117
gb|AU068669.1|AU068669 AU068669 Rice callus Oryza sativa (j... 428 e-117
gb|AU068670.1|AU068670 AU068670 Rice callus Oryza sativa (j... 428 e-117
gb|AU076129.1|AU076129 AU076129 Rice panicle shorter than 3... 428 e-117
gb|AU082347.1|AU082347 AU082347 Rice callus Oryza sativa (j... 428 e-117
gb|AU097671.1|AU097671 AU097671 Rice panicle shorter than 3... 428 e-117
gb|AU097672.1|AU097672 AU097672 Rice panicle shorter than 3... 428 e-117
gb|CF290925.1|CF290925 14ROOT--01-C11.g1 Rice root plasmid ... 428 e-117
gb|CF318598.1|CF318598 HD--08-M15.g1 OsHDAC1-overexpressing... 428 e-117
gb|CF338483.1|CF338483 RCL1--01-N06.g1 Regenerated callus l... 428 e-117
gb|CF338741.1|CF338741 RCL1--02-K06.g1 Regenerated callus l... 428 e-117
gb|CF339512.1|CF339512 RCL1--05-B11.g1 Regenerated callus l... 428 e-117
gb|CF339642.1|CF339642 RCL1--05-I03.g1 Regenerated callus l... 428 e-117
gb|CF339736.1|CF339736 RCL1--05-M18.g1 Regenerated callus l... 428 e-117
gb|CF339787.1|CF339787 RCL1--05-O24.g1 Regenerated callus l... 428 e-117
gb|CF340036.1|CF340036 RCL1--06-M03.g1 Regenerated callus l... 428 e-117
gb|CF340228.1|CF340228 RCL1--07-F18.g1 Regenerated callus l... 428 e-117
gb|CF340525.1|CF340525 RCL1--08-E24.g1 Regenerated callus l... 428 e-117
gb|CF340729.1|CF340729 RCL1--08-P04.g1 Regenerated callus l... 428 e-117
gb|CV731425.1|CV731425 FLO--05-H09.b1 Rice flower lambda ph... 428 e-117
dbj|AP004620.3| Oryza sativa (japonica cultivar-group) geno... 428 e-117
gb|AACV01018772.1| Oryza sativa (japonica cultivar-group) c... 428 e-117
ref|XM_483094.1| Oryza sativa (japonica cultivar-group), mRNA 428 e-117
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 428 e-117
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 428 e-117
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 428 e-117
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 428 e-117
gb|CB670863.1|CB670863 OSJNEe04C16.r OSJNEe Oryza sativa (j... 426 e-117
gb|CV728225.1|CV728225 14Salt--06-N03.g1 Salt treated rice ... 426 e-117
gb|AU057602.2|AU057602 AU057602 Oryza sativa mature leaf Ni... 426 e-117
ref|NM_184403.1| Oryza sativa (japonica cultivar-group), mRNA 426 e-117
gb|AU082356.1|AU082356 AU082356 Rice callus Oryza sativa (j... 424 e-116
gb|AU097668.1|AU097668 AU097668 Rice callus Oryza sativa (j... 424 e-116
gb|AU097681.1|AU097681 AU097681 Rice root Oryza sativa (jap... 424 e-116
gb|CA756225.1|CA756225 BR030038000_PLATE_A05_33_035.ab1 OA ... 424 e-116
gb|CF290908.1|CF290908 14ROOT--01-B24.g1 Rice root plasmid ... 424 e-116
gb|CF291302.1|CF291302 14ROOT--01-K20.b1 Rice root plasmid ... 424 e-116
gb|CF292090.1|CF292090 14ROOT--02-M12.g1 Rice root plasmid ... 424 e-116
gb|CF297134.1|CF297134 30DGS--07-M18.b1 Rice leaf plasmid c... 424 e-116
gb|CF333577.1|CF333577 JMT--02-I13.b1 AtJMT-overexpressing ... 424 e-116
gb|CV733415.1|CV733415 FLO--08-F04.g1 Rice flower lambda ph... 424 e-116
ref|NM_184405.1| Oryza sativa (japonica cultivar-group), mRNA 424 e-116
gb|CF313968.1|CF313968 HD--02-E24.g1 OsHDAC1-overexpressing... 420 e-115
gb|CV729266.1|CV729266 FLO--02-A05.b1 Rice flower lambda ph... 420 e-115
gb|CV732516.1|CV732516 FLO--07-A10.b1 Rice flower lambda ph... 420 e-115
gb|CF281520.1|CF281520 14ETL--08-J17.b1 Rice etiolated leaf... 416 e-114
gb|CF338330.1|CF338330 RCL1--01-F18.g1 Regenerated callus l... 414 e-113
gb|CF340422.1|CF340422 RCL1--07-P17.g1 Regenerated callus l... 414 e-113
gb|AU076128.1|AU076128 AU076128 Rice panicle shorter than 3... 412 e-112
gb|CF280347.1|CF280347 14ETL--06-P18.b1 Rice etiolated leaf... 408 e-111
gb|CF292189.1|CF292189 14ROOT--02-O19.b1 Rice root plasmid ... 408 e-111
gb|C27274.1|C27274 C27274 Rice callus cDNA Oryza sativa (ja... 406 e-111
gb|AU097675.1|AU097675 AU097675 Rice immature leaf includin... 406 e-111
gb|AU029407.1|AU029407 AU029407 Rice panicle shorter than 3... 404 e-110
gb|AU030153.2|AU030153 AU030153 Rice cDNA from immature lea... 404 e-110
gb|C73984.2|C73984 C73984 Rice panicle shorter than 3cm Ory... 402 e-109
gb|AU182734.1|AU182734 AU182734 Rice panicle shorter than 3... 400 e-109
gb|CB661775.1|CB661775 OSJNEd05B14.f OSJNEd Oryza sativa (j... 400 e-109
gb|CF334827.1|CF334827 JMT--04-E05.b1 AtJMT-overexpressing ... 400 e-109
gb|CO435616.1|CO435616 OsMR682 5MT resistant rice mutant cD... 400 e-109
gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbar... 400 e-109
gb|AACV01006345.1| Oryza sativa (japonica cultivar-group) c... 400 e-109
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 400 e-109
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 400 e-109
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 400 e-109
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 400 e-109
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 400 e-109
gb|AU097674.1|AU097674 AU097674 Rice immature leaf includin... 398 e-108
gb|CF279531.1|CF279531 14ETL--05-N20.b1 Rice etiolated leaf... 392 e-106
gb|CV731643.1|CV731643 FLO--05-M07.g1 Rice flower lambda ph... 392 e-106
gb|AU183294.1|AU183294 AU183294 Rice cDNA from immature lea... 389 e-105
gb|CF281757.1|CF281757 14ETL--08-P04.b1 Rice etiolated leaf... 387 e-105
gb|CF290907.1|CF290907 14ROOT--01-B24.b1 Rice root plasmid ... 387 e-105
gb|CF291327.1|CF291327 14ROOT--01-L08.g1 Rice root plasmid ... 387 e-105
gb|CV728821.1|CV728821 FLO--01-F13.g1 Rice flower lambda ph... 387 e-105
gb|AU097680.2|AU097680 AU097680 Rice root Oryza sativa (jap... 387 e-105
gb|CF333474.1|CF333474 JMT--02-G04.g1 AtJMT-overexpressing ... 385 e-104
gb|AU097683.1|AU097683 AU097683 Rice cDNA from young root O... 383 e-103
gb|CF291303.1|CF291303 14ROOT--01-K20.g1 Rice root plasmid ... 383 e-103
gb|CF292089.1|CF292089 14ROOT--02-M12.b1 Rice root plasmid ... 379 e-102
gb|CF313653.1|CF313653 HD--01-N17.g1 OsHDAC1-overexpressing... 379 e-102
gb|CV724027.1|CV724027 root--05-J06.g1 Rice root lambda pha... 379 e-102
gb|CV729210.1|CV729210 FLO--01-O23.b1 Rice flower lambda ph... 379 e-102
gb|CF281758.1|CF281758 14ETL--08-P04.g1 Rice etiolated leaf... 377 e-102
gb|CF292149.1|CF292149 14ROOT--02-N19.g1 Rice root plasmid ... 377 e-102
gb|CV728178.1|CV728178 14Salt--06-L23.b1 Salt treated rice ... 377 e-102
gb|AU097676.1|AU097676 AU097676 Rice immature leaf includin... 375 e-101
gb|CV727429.1|CV727429 14Salt--05-J04.b1 Salt treated rice ... 375 e-101
gb|CV729191.1|CV729191 FLO--01-O12.b1 Rice flower lambda ph... 375 e-101
gb|CV733073.1|CV733073 FLO--07-N06.b1 Rice flower lambda ph... 375 e-101
gb|AU097677.1|AU097677 AU097677 Rice cDNA from immature lea... 373 e-100
gb|CF291429.1|CF291429 14ROOT--01-N15.b1 Rice root plasmid ... 373 e-100
gb|CF339471.1|CF339471 RCL1--04-P13.g1 Regenerated callus l... 373 e-100
gb|CV725853.1|CV725853 14Salt--03-C23.b1 Salt treated rice ... 373 e-100
gb|CV730589.1|CV730589 FLO--04-D06.g1 Rice flower lambda ph... 373 e-100
gb|AU091836.1|AU091836 AU091836 Rice callus Oryza sativa (j... 371 e-100
gb|CF338869.1|CF338869 RCL1--03-A13.g1 Regenerated callus l... 371 e-100
gb|CF340382.1|CF340382 RCL1--07-N17.g1 Regenerated callus l... 371 e-100
gb|CF340744.1|CF340744 RCL1--08-P20.g1 Regenerated callus l... 371 e-100
gb|CV725979.1|CV725979 14Salt--03-G01.b1 Salt treated rice ... 371 e-100
gb|CV727137.1|CV727137 14Salt--05-C06.g1 Salt treated rice ... 371 e-100
gb|CV731556.1|CV731556 FLO--05-K07.b1 Rice flower lambda ph... 369 2e-099
gb|CV731986.1|CV731986 FLO--06-E06.b1 Rice flower lambda ph... 369 2e-099
gb|CV733163.1|CV733163 FLO--07-P07.b1 Rice flower lambda ph... 367 7e-099
gb|CV734119.1|CV734119 FLO--09-F11.b1 Rice flower lambda ph... 367 7e-099
gb|CF293430.1|CF293430 30DGS--02-J22.b1 Rice leaf plasmid c... 365 3e-098
gb|CV725854.1|CV725854 14Salt--03-C23.g1 Salt treated rice ... 365 3e-098
gb|CV727430.1|CV727430 14Salt--05-J04.g1 Salt treated rice ... 365 3e-098
gb|CV728989.1|CV728989 FLO--01-J16.g1 Rice flower lambda ph... 365 3e-098
gb|CV725902.1|CV725902 14Salt--03-E01.b1 Salt treated rice ... 363 1e-097
gb|CV729577.1|CV729577 FLO--02-J14.g1 Rice flower lambda ph... 363 1e-097
gb|AQ362504.2|AQ362504 nbxb0050G11f CUGI Rice BAC Library O... 361 4e-097
gb|C74070.1|C74070 C74070 Rice panicle shorter than 3cm Ory... 361 4e-097
gb|CV727985.1|CV727985 14Salt--06-G22.b1 Salt treated rice ... 361 4e-097
gb|CV734350.1|CV734350 FLO--09-K18.b1 Rice flower lambda ph... 361 4e-097
gb|AACV01001262.1| Oryza sativa (japonica cultivar-group) c... 361 4e-097
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 361 4e-097
dbj|AP003144.1| Oryza sativa (japonica cultivar-group) geno... 361 4e-097
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 361 4e-097
gb|AU070851.1|AU070851 AU070851 Rice cDNA from young root O... 359 2e-096
gb|CV727136.1|CV727136 14Salt--05-C06.b1 Salt treated rice ... 359 2e-096
gb|CV729192.1|CV729192 FLO--01-O12.g1 Rice flower lambda ph... 359 2e-096
gb|CV732517.1|CV732517 FLO--07-A10.g1 Rice flower lambda ph... 359 2e-096
gb|CV731957.1|CV731957 FLO--06-D15.b1 Rice flower lambda ph... 357 6e-096
gb|CV725903.1|CV725903 14Salt--03-E01.g1 Salt treated rice ... 355 3e-095
gb|CV726600.1|CV726600 14Salt--04-F09.g1 Salt treated rice ... 355 3e-095
gb|CV729459.1|CV729459 FLO--02-F22.b1 Rice flower lambda ph... 355 3e-095
gb|C97158.1|C97158 C97158 Rice callus Oryza sativa (japonic... 353 1e-094
gb|CV731426.1|CV731426 FLO--05-H09.g1 Rice flower lambda ph... 353 1e-094
gb|CV733685.1|CV733685 FLO--08-L10.g1 Rice flower lambda ph... 353 1e-094
gb|CV734351.1|CV734351 FLO--09-K18.g1 Rice flower lambda ph... 353 1e-094
gb|CV728663.1|CV728663 FLO--01-B21.g1 Rice flower lambda ph... 351 4e-094
gb|CV731958.1|CV731958 FLO--06-D15.g1 Rice flower lambda ph... 351 4e-094
gb|CF293431.1|CF293431 30DGS--02-J22.g1 Rice leaf plasmid c... 349 2e-093
gb|AU063158.1|AU063158 AU063158 Rice callus Oryza sativa (j... 347 6e-093
gb|CV725419.1|CV725419 14Salt--02-H24.g1 Salt treated rice ... 347 6e-093
gb|CV731557.1|CV731557 FLO--05-K07.g1 Rice flower lambda ph... 347 6e-093
gb|CV729576.1|CV729576 FLO--02-J14.b1 Rice flower lambda ph... 345 2e-092
gb|CV734434.1|CV734434 FLO--09-M20.g1 Rice flower lambda ph... 345 2e-092
gb|CF292220.1|CF292220 14ROOT--02-P12.g1 Rice root plasmid ... 341 4e-091
gb|AU097670.1|AU097670 AU097670 Rice panicle (longer than 1... 339 1e-090
gb|AU172806.1|AU172806 AU172806 Rice panicle shorter than 3... 339 1e-090
gb|AU174701.1|AU174701 AU174701 Rice cDNA from leaf Oryza s... 339 1e-090
gb|CV731642.1|CV731642 FLO--05-M07.b1 Rice flower lambda ph... 339 1e-090
gb|CV732640.1|CV732640 FLO--07-D08.b1 Rice flower lambda ph... 339 1e-090
gb|AACV01002648.1| Oryza sativa (japonica cultivar-group) c... 339 1e-090
ref|NM_190523.1| Oryza sativa (japonica cultivar-group), p... 339 1e-090
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 339 1e-090
dbj|AP003231.3| Oryza sativa (japonica cultivar-group) geno... 339 1e-090
dbj|AP003241.3| Oryza sativa (japonica cultivar-group) geno... 339 1e-090
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 339 1e-090
gb|AU065894.1|AU065894 AU065894 Rice green shoot Oryza sati... 333 9e-089
gb|AU182176.1|AU182176 AU182176 Rice callus (2001) Oryza sa... 333 9e-089
gb|AU031162.1|AU031162 AU031162 Rice cDNA from immature lea... 331 4e-088
gb|AU064314.2|AU064314 AU064314 Rice panicle (longer than 1... 331 4e-088
gb|CV729874.1|CV729874 FLO--03-C07.b1 Rice flower lambda ph... 329 1e-087
gb|AU062984.1|AU062984 AU062984 Rice callus Oryza sativa (j... 327 6e-087
gb|AZ130708.1|AZ130708 OSJNBb0062D13f CUGI Rice BAC Library... 323 9e-086
gb|CF325670.1|CF325670 JMT1--03-N20.g1 AtJMT-overexpressing... 323 9e-086
gb|D22681.1|D22681 RICC0893A Rice callus Oryza sativa (japo... 321 4e-085
gb|CF290948.1|CF290948 14ROOT--01-D01.g1 Rice root plasmid ... 321 4e-085
gb|CF292041.1|CF292041 14ROOT--02-L10.g1 Rice root plasmid ... 319 1e-084
gb|CV721027.1|CV721027 YBH--02-K11.b1 Rice before heading y... 319 1e-084
gb|AU075448.1|AU075448 AU075448 Rice cDNA from immature lea... 317 5e-084
gb|CV721456.1|CV721456 YBH--04-D02.b1 Rice before heading y... 317 5e-084
gb|AC117265.2| Oryza sativa (japonica cultivar-group) chrom... 317 5e-084
gb|AACV01012349.1| Oryza sativa (japonica cultivar-group) c... 317 5e-084
ref|XM_475367.1| Oryza sativa (japonica cultivar-group), p... 317 5e-084
ref|NT_107213.1| Oryza sativa (japonica cultivar-group) 317 5e-084
gb|CA999413.1|CA999413 S234H_C02 Rice cold stress germinati... 315 2e-083
gb|CF292228.1|CF292228 14ROOT--02-P16.g1 Rice root plasmid ... 313 9e-083
gb|C74089.1|C74089 C74089 Rice panicle shorter than 3cm Ory... 311 3e-082
gb|CV721437.1|CV721437 YBH--04-C03.b1 Rice before heading y... 311 3e-082
gb|CV734120.1|CV734120 FLO--09-F11.g1 Rice flower lambda ph... 311 3e-082
gb|CF281521.1|CF281521 14ETL--08-J17.g1 Rice etiolated leaf... 309 1e-081
gb|AU095013.1|AU095013 AU095013 Rice immature leaf includin... 305 2e-080
gb|CF292219.1|CF292219 14ROOT--02-P12.b1 Rice root plasmid ... 305 2e-080
gb|CV729931.1|CV729931 FLO--03-D14.g1 Rice flower lambda ph... 305 2e-080
gb|CV720894.1|CV720894 YBH--02-D09.b1 Rice before heading y... 303 8e-080
gb|CV723677.1|CV723677 root--04-G10.g1 Rice root lambda pha... 301 3e-079
gb|CV729413.1|CV729413 FLO--02-E17.b1 Rice flower lambda ph... 297 5e-078
gb|CV732641.1|CV732641 FLO--07-D08.g1 Rice flower lambda ph... 297 5e-078
gb|CV733074.1|CV733074 FLO--07-N06.g1 Rice flower lambda ph... 297 5e-078
gb|CV733414.1|CV733414 FLO--08-F04.b1 Rice flower lambda ph... 293 8e-077
gb|AU057673.1|AU057673 AU057673 Oryza sativa mature leaf Ni... 291 3e-076
gb|CV729896.1|CV729896 FLO--03-C19.b1 Rice flower lambda ph... 283 8e-074
gb|CV733684.1|CV733684 FLO--08-L10.b1 Rice flower lambda ph... 281 3e-073
gb|CF290924.1|CF290924 14ROOT--01-C11.b1 Rice root plasmid ... 278 5e-072
gb|AU225174.1|AU225174 AU225174 Oryza sativa Koshihikari pi... 276 2e-071
gb|CV733085.1|CV733085 FLO--07-N13.g1 Rice flower lambda ph... 268 5e-069
gb|C98207.1|C98207 C98207 Rice callus Oryza sativa (japonic... 258 4e-066
gb|CF312627.1|CF312627 ABF--08-H11.g1 ABF3-overexpressing t... 258 4e-066
gb|C97239.1|C97239 C97239 Rice callus Oryza sativa (japonic... 256 2e-065
gb|CV720821.1|CV720821 YBH--01-P10.b1 Rice before heading y... 250 1e-063
gb|AQ157995.1|AQ157995 nbxb0010O24f CUGI Rice BAC Library O... 242 3e-061
gb|AU092764.1|AU092764 AU092764 Rice callus Oryza sativa (j... 240 1e-060
gb|CF280348.1|CF280348 14ETL--06-P18.g1 Rice etiolated leaf... 238 4e-060
gb|C97210.1|C97210 C97210 Rice callus Oryza sativa (japonic... 234 6e-059
gb|AU097669.1|AU097669 AU097669 Rice callus Oryza sativa (j... 232 3e-058
gb|CF277856.1|CF277856 14ETL--03-I19.b1 Rice etiolated leaf... 218 4e-054
gb|CV728988.1|CV728988 FLO--01-J16.b1 Rice flower lambda ph... 218 4e-054
gb|D48146.2|D48146 RICS14215A Rice green shoot Oryza sativa... 218 4e-054
gb|D49215.1|D49215 RICS16333A Rice green shoot Oryza sativa... 216 1e-053
gb|C97157.1|C97157 C97157 Rice callus Oryza sativa (japonic... 214 6e-053
gb|CV731377.1|CV731377 FLO--05-G05.g1 Rice flower lambda ph... 214 6e-053
gb|AU095590.1|AU095590 AU095590 Rice cDNA from young root O... 204 6e-050
gb|AU070557.1|AU070557 AU070557 Rice shoot Oryza sativa (ja... 202 2e-049
gb|AQ868678.1|AQ868678 nbeb0030B11r CUGI Rice BAC Library (... 200 9e-049
gb|D23591.1|D23591 RICC3057A Rice callus Oryza sativa (japo... 198 4e-048
gb|C73966.1|C73966 C73966 Rice panicle shorter than 3cm Ory... 194 5e-047
gb|AU062949.2|AU062949 AU062949 Rice callus Oryza sativa (j... 192 2e-046
dbj|AK059159.1| Oryza sativa (japonica cultivar-group) cDNA... 192 2e-046
gb|AU184845.1|AU184845 AU184845 Rice cDNA from young root O... 190 9e-046
gb|CF277857.1|CF277857 14ETL--03-I19.g1 Rice etiolated leaf... 190 9e-046
gb|CF339158.1|CF339158 RCL1--03-P11.g1 Regenerated callus l... 188 3e-045
gb|CV725777.1|CV725777 14Salt--03-B01.g1 Salt treated rice ... 188 3e-045
gb|CV728224.1|CV728224 14Salt--06-N03.b1 Salt treated rice ... 188 3e-045
gb|CF315774.1|CF315774 HD--04-N03.b1 OsHDAC1-overexpressing... 182 2e-043
gb|D25082.1|D25082 RICR3125A Rice root Oryza sativa (japoni... 182 2e-043
gb|AU082915.1|AU082915 AU082915 Rice callus Oryza sativa (j... 176 1e-041
gb|D22526.1|D22526 RICC0138B Rice callus Oryza sativa (japo... 165 5e-038
gb|CF334828.1|CF334828 JMT--04-E05.g1 AtJMT-overexpressing ... 159 3e-036
gb|AU064441.1|AU064441 AU064441 Rice panicle shorter than 3... 153 2e-034
gb|CF278595.1|CF278595 14ETL--04-I24.g1 Rice etiolated leaf... 151 7e-034
gb|C74145.1|C74145 C74145 Rice panicle shorter than 3cm Ory... 145 5e-032
gb|C74202.1|C74202 C74202 Rice panicle shorter than 3cm Ory... 145 5e-032
gb|D15624.1|D15624 RICC0972A Rice callus Oryza sativa (japo... 145 5e-032
gb|AU058172.1|AU058172 AU058172 Oryza sativa Nipponbare imm... 145 5e-032
gb|AU096554.1|AU096554 AU096554 Rice green shoot Oryza sati... 139 3e-030
gb|D40363.1|D40363 RICS2285A Rice shoot Oryza sativa (japon... 137 1e-029
gb|AU097667.1|AU097667 AU097667 Rice callus Oryza sativa (j... 133 2e-028
gb|CV730130.1|CV730130 FLO--03-I07.b1 Rice flower lambda ph... 133 2e-028
gb|C27926.1|C27926 C27926 Rice callus cDNA Oryza sativa (ja... 131 7e-028
gb|CV729460.1|CV729460 FLO--02-F22.g1 Rice flower lambda ph... 127 1e-026
gb|AU064386.1|AU064386 AU064386 Rice panicle shorter than 3... 115 4e-023
gb|CV725556.1|CV725556 14Salt--02-L07.b1 Salt treated rice ... 113 2e-022
gb|CV731376.1|CV731376 FLO--05-G05.b1 Rice flower lambda ph... 113 2e-022
gb|D22527.1|D22527 RICC0138A Rice callus Oryza sativa (japo... 111 6e-022
gb|C27445.1|C27445 C27445 Rice callus cDNA Oryza sativa (ja... 109 3e-021
gb|C74297.1|C74297 C74297 Rice panicle shorter than 3cm Ory... 109 3e-021
gb|CV729930.1|CV729930 FLO--03-D14.b1 Rice flower lambda ph... 109 3e-021
gb|D23046.1|D23046 RICC2090A Rice callus Oryza sativa (japo... 107 1e-020
gb|AU062423.1|AU062423 AU062423 Rice callus Oryza sativa (j... 107 1e-020
gb|C27000.1|C27000 C27000 Rice callus cDNA Oryza sativa (ja... 105 4e-020
gb|AU058305.1|AU058305 AU058305 Oryza sativa Nipponbare imm... 105 4e-020
dbj|AP004558.3| Oryza sativa (japonica cultivar-group) geno... 105 4e-020
dbj|AP004665.4| Oryza sativa (japonica cultivar-group) geno... 105 4e-020
gb|AACV01018587.1| Oryza sativa (japonica cultivar-group) c... 105 4e-020
gb|D24618.1|D24618 RICR2259A Rice root Oryza sativa (japoni... 100 2e-018
gb|AU029901.1|AU029901 AU029901 Rice cDNA from immature lea... 100 2e-018
gb|AU058177.1|AU058177 AU058177 Oryza sativa Nipponbare imm... 100 2e-018
gb|AU174702.1|AU174702 AU174702 Rice cDNA from leaf Oryza s... 100 2e-018
gb|AQ161058.1|AQ161058 nbxb0006M04f CUGI Rice BAC Library O... 98 1e-017
gb|D23918.1|D23918 RICR0573A Rice root Oryza sativa (japoni... 98 1e-017
gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbar... 98 1e-017
gb|AACV01006503.1| Oryza sativa (japonica cultivar-group) c... 98 1e-017
gb|D47132.1|D47132 RICS12273A Rice green shoot Oryza sativa... 94 1e-016
gb|CV729554.1|CV729554 FLO--02-I20.b1 Rice flower lambda ph... 94 1e-016
dbj|AP003918.3| Oryza sativa (japonica cultivar-group) geno... 92 6e-016
gb|AACV01017940.1| Oryza sativa (japonica cultivar-group) c... 92 6e-016
dbj|AP005390.2| Oryza sativa (japonica cultivar-group) geno... 92 6e-016
gb|AU030152.1|AU030152 AU030152 Rice cDNA from immature lea... 90 2e-015
gb|AU063733.1|AU063733 AU063733 Rice callus Oryza sativa (j... 90 2e-015
gb|AU097666.1|AU097666 AU097666 Rice callus Oryza sativa (j... 90 2e-015
dbj|AK108119.1| Oryza sativa (japonica cultivar-group) cDNA... 90 2e-015
gb|CF338670.1|CF338670 RCL1--02-G18.g1 Regenerated callus l... 88 9e-015
gb|CV727986.1|CV727986 14Salt--06-G22.g1 Salt treated rice ... 88 9e-015
ref|XM_482672.1| Oryza sativa (japonica cultivar-group), mRNA 86 4e-014
gb|CV733627.1|CV733627 FLO--08-K01.g1 Rice flower lambda ph... 84 1e-013
gb|D23468.1|D23468 RICC2857A Rice callus Oryza sativa (japo... 82 6e-013
gb|AU062951.1|AU062951 AU062951 Rice callus Oryza sativa (j... 76 3e-011
gb|C97215.2|C97215 C97215 Rice callus Oryza sativa (japonic... 76 3e-011
dbj|AP005069.2| Oryza sativa (japonica cultivar-group) geno... 72 5e-010
gb|AACV01020855.1| Oryza sativa (japonica cultivar-group) c... 72 5e-010
ref|NT_107179.1| Oryza sativa (japonica cultivar-group) 72 5e-010
gb|CH401245.1| Oryza sativa (japonica cultivar-group) chrom... 72 5e-010
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 72 5e-010
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 72 5e-010
dbj|AK106505.1| Oryza sativa (japonica cultivar-group) cDNA... 70 2e-009
ref|NT_107078.1| Oryza sativa (japonica cultivar-group) 70 2e-009
ref|NT_107237.1| Oryza sativa (japonica cultivar-group) 70 2e-009
dbj|AP006162.2| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
dbj|AP006164.2| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
dbj|AP006166.3| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
gb|AACV01013677.1| Oryza sativa (japonica cultivar-group) c... 70 2e-009
gb|AACV01020566.1| Oryza sativa (japonica cultivar-group) c... 70 2e-009
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
gb|CH401210.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
gb|AU093193.1|AU093193 AU093193 Rice callus Oryza sativa (j... 68 9e-009
gb|CF296222.1|CF296222 30DGS--06-H23.g1 Rice leaf plasmid c... 68 9e-009
gb|CF315294.1|CF315294 HD--04-C15.b1 OsHDAC1-overexpressing... 68 9e-009
emb|AL731874.4|CNS08C8E Oryza sativa chromosome 12, . BAC O... 68 9e-009
gb|AC137921.2| Oryza sativa chromosome 3 BAC OSJNBa0027H16 ... 68 9e-009
ref|NT_079833.2| Oryza sativa (japonica cultivar-group) 68 9e-009
gb|AACV01007221.1| Oryza sativa (japonica cultivar-group) c... 68 9e-009
gb|AACV01011256.1| Oryza sativa (japonica cultivar-group) c... 68 9e-009
gb|AACV01020975.1| Oryza sativa (japonica cultivar-group) c... 68 9e-009
ref|NT_080061.1| Oryza sativa (japonica cultivar-group) chr... 68 9e-009
ref|XM_463083.1| Oryza sativa (japonica cultivar-group), mRNA 68 9e-009
ref|NT_107174.1| Oryza sativa (japonica cultivar-group) 68 9e-009
gb|CH401192.1| Oryza sativa (japonica cultivar-group) chrom... 68 9e-009
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 68 9e-009
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 68 9e-009
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 68 9e-009
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 68 9e-009
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 68 9e-009
gb|AC135914.2| Oryza sativa (japonica cultivar-group) chrom... 66 3e-008
gb|AC136226.2| Oryza sativa (japonica cultivar-group) chrom... 66 3e-008
gb|AACV01002319.1| Oryza sativa (japonica cultivar-group) c... 66 3e-008
gb|AACV01011154.1| Oryza sativa (japonica cultivar-group) c... 66 3e-008
ref|NT_107225.1| Oryza sativa (japonica cultivar-group) 66 3e-008
dbj|AP002972.3| Oryza sativa (japonica cultivar-group) geno... 66 3e-008
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 66 3e-008
gb|CF279284.1|CF279284 14ETL--05-I13.b1 Rice etiolated leaf... 64 1e-007
gb|D39530.1|D39530 RICS0937A Rice shoot Oryza sativa (japon... 62 5e-007
gb|CF315295.1|CF315295 HD--04-C15.g1 OsHDAC1-overexpressing... 62 5e-007
gb|AC129224.2| Oryza sativa (japonica cultivar-group) chrom... 62 5e-007
gb|AC120888.2| Oryza sativa (japonica cultivar-group) chrom... 62 5e-007
ref|NT_107135.1| Oryza sativa (japonica cultivar-group) 62 5e-007
gb|AACV01023698.1| Oryza sativa (japonica cultivar-group) c... 62 5e-007
gb|CH401266.1| Oryza sativa (japonica cultivar-group) chrom... 62 5e-007
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 62 5e-007
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 62 5e-007
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 62 5e-007
gb|CF279532.1|CF279532 14ETL--05-N20.g1 Rice etiolated leaf... 58 8e-006
gb|AACV01005126.1| Oryza sativa (japonica cultivar-group) c... 58 8e-006
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 58 8e-006
dbj|AP004160.2| Oryza sativa (japonica cultivar-group) geno... 58 8e-006
dbj|AP005885.3| Oryza sativa (japonica cultivar-group) geno... 58 8e-006
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 58 8e-006
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 58 8e-006
gb|CV733062.1|CV733062 FLO--07-M24.b1 Rice flower lambda ph... 56 3e-005
gb|AC139174.3| Oryza sativa chromosome 3 BAC OSJNBb0065L20 ... 56 3e-005
gb|AACV01007551.1| Oryza sativa (japonica cultivar-group) c... 56 3e-005
ref|NT_107185.1| Oryza sativa (japonica cultivar-group) 56 3e-005
gb|AU093220.1|AU093220 AU093220 Rice callus Oryza sativa (j... 54 1e-004
dbj|AP004631.1| Oryza sativa (japonica cultivar-group) chro... 54 1e-004
dbj|AP004465.3| Oryza sativa (japonica cultivar-group) geno... 54 1e-004
gb|AC134256.4| Oryza sativa (japonica cultivar-group), comp... 54 1e-004
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 54 1e-004
ref|NT_107091.1| Oryza sativa (japonica cultivar-group), co... 54 1e-004
dbj|AP003622.3| Oryza sativa (japonica cultivar-group) geno... 54 1e-004
gb|AACV01014439.1| Oryza sativa (japonica cultivar-group) c... 54 1e-004
gb|AACV01018311.1| Oryza sativa (japonica cultivar-group) c... 54 1e-004
gb|AACV01023287.1| Oryza sativa (japonica cultivar-group) c... 54 1e-004
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
gb|AQ870965.1|AQ870965 nbeb0041J05r CUGI Rice BAC Library (... 52 5e-004
dbj|AP004661.3| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
dbj|AP004554.3| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
dbj|AP005286.3| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
dbj|AP005532.3| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
gb|AC134341.2| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
ref|NT_079878.2| Oryza sativa (japonica cultivar-group) 52 5e-004
dbj|AP005929.3| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
gb|AACV01003979.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
gb|AACV01004890.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
gb|AACV01010945.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
gb|AACV01012890.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
gb|AACV01014110.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
gb|AACV01018073.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
dbj|AP002837.2| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
dbj|AP001389.1| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 52 5e-004
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 52 5e-004
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 52 5e-004
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 52 5e-004
gb|CH401214.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|CA755693.1|CA755693 BR030026001_BR030_B03_18_025.ab1 OA ... 50 0.002
gb|CF313652.1|CF313652 HD--01-N17.b1 OsHDAC1-overexpressing... 50 0.002
dbj|AP004801.3| Oryza sativa (japonica cultivar-group) geno... 50 0.002
gb|AACV01002285.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01003786.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01019447.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01021331.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
ref|NT_080065.1| Oryza sativa (japonica cultivar-group) chr... 50 0.002
ref|NT_107079.1| Oryza sativa (japonica cultivar-group) 50 0.002
dbj|AP005839.3| Oryza sativa (japonica cultivar-group) geno... 50 0.002
dbj|AP003142.2| Oryza sativa (japonica cultivar-group) geno... 50 0.002
gb|CH401253.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|CH401241.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|AC083945.3| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|CF279285.1|CF279285 14ETL--05-I13.g1 Rice etiolated leaf... 48 0.008
emb|AL731583.2|OSJN00231 Oryza sativa genomic DNA, chromoso... 48 0.008
dbj|AP003811.2| Oryza sativa (japonica cultivar-group) geno... 48 0.008
gb|AACV01009048.1| Oryza sativa (japonica cultivar-group) c... 48 0.008
gb|AACV01016454.1| Oryza sativa (japonica cultivar-group) c... 48 0.008
gb|AACV01017932.1| Oryza sativa (japonica cultivar-group) c... 48 0.008
ref|NT_079855.2| Oryza sativa (japonica cultivar-group) 48 0.008
dbj|AP006753.2| Oryza sativa (japonica cultivar-group) geno... 48 0.008
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 48 0.008
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.008
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.008
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.008
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.008
emb|AL731604.3|OSJN00247 Oryza sativa genomic DNA, chromoso... 48 0.008
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 48 0.008
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 48 0.008
gb|CV722702.1|CV722702 root--01-F02.g1 Rice root lambda pha... 46 0.031
dbj|AP004659.2| Oryza sativa (japonica cultivar-group) chro... 46 0.031
dbj|AP005388.2| Oryza sativa (japonica cultivar-group) geno... 46 0.031
dbj|AP003904.3| Oryza sativa (japonica cultivar-group) geno... 46 0.031
gb|AC108883.1| Genomic sequence for (japonica cultivar-grou... 46 0.031
gb|AC145127.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.031
dbj|AP004461.3| Oryza sativa (japonica cultivar-group) geno... 46 0.031
gb|AC130603.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.031
gb|AC120984.3| Oryza sativa (japonica cultivar-group) chrom... 46 0.031
dbj|AP005740.3| Oryza sativa (japonica cultivar-group) geno... 46 0.031
ref|NT_107132.1| Oryza sativa (japonica cultivar-group) 46 0.031
gb|AACV01005861.1| Oryza sativa (japonica cultivar-group) c... 46 0.031
gb|AACV01012563.1| Oryza sativa (japonica cultivar-group) c... 46 0.031
gb|AACV01017271.1| Oryza sativa (japonica cultivar-group) c... 46 0.031
gb|AACV01018423.1| Oryza sativa (japonica cultivar-group) c... 46 0.031
gb|AACV01018424.1| Oryza sativa (japonica cultivar-group) c... 46 0.031
gb|AACV01025707.1| Oryza sativa (japonica cultivar-group) C... 46 0.031
ref|NT_080060.1| Oryza sativa (japonica cultivar-group) chr... 46 0.031
ref|NT_107217.1| Oryza sativa (japonica cultivar-group) 46 0.031
gb|CH401300.1| Oryza sativa (japonica cultivar-group) scaff... 46 0.031
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.031
gb|AC166065.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.031
gb|AC079632.4| Oryza sativa (japonica cultivar-group) chrom... 46 0.031
gb|C20006.1|C20006 C20006 Rice panicle at ripening stage Or... 44 0.12
gb|C20148.1|C20148 C20148 Rice panicle at ripening stage Or... 44 0.12
gb|C20231.1|C20231 C20231 Rice panicle at ripening stage Or... 44 0.12
gb|C20247.1|C20247 C20247 Rice panicle at ripening stage Or... 44 0.12
gb|C20253.1|C20253 C20253 Rice panicle at ripening stage Or... 44 0.12
gb|C24997.1|C24997 C24997 Rice green shoot Oryza sativa (ja... 44 0.12
gb|C74210.1|C74210 C74210 Rice panicle shorter than 3cm Ory... 44 0.12
gb|C93565.1|C93565 C93565 Rice callus Oryza sativa (japonic... 44 0.12
gb|D22733.1|D22733 RICC1108A Rice callus Oryza sativa (japo... 44 0.12
gb|D22836.1|D22836 RICC1553A Rice callus Oryza sativa (japo... 44 0.12
gb|D22918.1|D22918 RICC1779A Rice callus Oryza sativa (japo... 44 0.12
gb|D23481.1|D23481 RICC2879A Rice callus Oryza sativa (japo... 44 0.12
gb|D23543.1|D23543 RICC2981A Rice callus Oryza sativa (japo... 44 0.12
>gb|AU097673.1|AU097673 AU097673 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30833, mRNA sequence
Length = 697
Score = 474 bits (239), Expect = e-131
Identities = 284/299 (94%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 192 gaagaaggggaagaagagcgtggagacctacaagatctacatcttcaaggttctcaagca 251
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 311
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 312 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 371
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 372 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 431
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 432 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggctt 490
Score = 79.8 bits (40), Expect = 2e-012
Identities = 100/116 (86%), Gaps = 6/116 (5%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||| | ||||||||||| |||||||||||||| || |||||||||| ||
Sbjct: 32 atggcgcccaagncggagaagaagcc-gcggcgaagaagccc-cgaaggaggagccn-cg 88
Query: 145 gcggagaagac---gaccgccgggaagaagcccaaggcggagaagcggatccccgc 197
||||||||| | | | || ||||||||||||||||||||||||||| |||||||
Sbjct: 89 gcggagaaggccccggcggcggggaagaagcccaaggcggagaagcggctccccgc 144
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08,
complete sequence
Length = 119500
Score = 474 bits (239), Expect = e-131
Identities = 284/299 (94%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 26795 gaagaaggggaagaagagcgtggagacctacaagatctacatcttcaaggttctcaagca 26854
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26855 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 26914
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 26915 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 26974
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 26975 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 27034
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 27035 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggctt 27093
Score = 139 bits (70), Expect = 3e-030
Identities = 105/116 (90%), Gaps = 3/116 (2%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 26631 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 26690
Query: 145 gcggagaag---acgaccgccgggaagaagcccaaggcggagaagcggatccccgc 197
||||||||| || | || ||||||||||||||||||||||||||| |||||||
Sbjct: 26691 gcggagaaggccccggcggcggggaagaagcccaaggcggagaagcggctccccgc 26746
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10,
complete sequence
Length = 187034
Score = 474 bits (239), Expect = e-131
Identities = 284/299 (94%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 176113 gaagaaggggaagaagagcgtggagacctacaagatctacatcttcaaggttctcaagca 176172
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176173 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 176232
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 176233 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 176292
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 176293 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 176352
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 176353 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggctt 176411
Score = 139 bits (70), Expect = 3e-030
Identities = 105/116 (90%), Gaps = 3/116 (2%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 175949 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 176008
Query: 145 gcggagaag---acgaccgccgggaagaagcccaaggcggagaagcggatccccgc 197
||||||||| || | || ||||||||||||||||||||||||||| |||||||
Sbjct: 176009 gcggagaaggccccggcggcggggaagaagcccaaggcggagaagcggctccccgc 176064
>gb|AACV01012743.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012743, whole
genome shotgun sequence
Length = 27501
Score = 474 bits (239), Expect = e-131
Identities = 284/299 (94%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 20281 gaagaaggggaagaagagcgtggagacctacaagatctacatcttcaaggttctcaagca 20222
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20221 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 20162
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 20161 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 20102
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 20101 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 20042
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 20041 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggctt 19983
Score = 139 bits (70), Expect = 3e-030
Identities = 105/116 (90%), Gaps = 3/116 (2%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 20445 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 20386
Query: 145 gcggagaag---acgaccgccgggaagaagcccaaggcggagaagcggatccccgc 197
||||||||| || | || ||||||||||||||||||||||||||| |||||||
Sbjct: 20385 gcggagaaggccccggcggcggggaagaagcccaaggcggagaagcggctccccgc 20330
>ref|NT_107222.1| Oryza sativa (japonica cultivar-group)
Length = 1298239
Score = 474 bits (239), Expect = e-131
Identities = 284/299 (94%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 26795 gaagaaggggaagaagagcgtggagacctacaagatctacatcttcaaggttctcaagca 26854
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26855 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 26914
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 26915 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 26974
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 26975 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 27034
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 27035 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggctt 27093
Score = 139 bits (70), Expect = 3e-030
Identities = 105/116 (90%), Gaps = 3/116 (2%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 26631 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 26690
Query: 145 gcggagaag---acgaccgccgggaagaagcccaaggcggagaagcggatccccgc 197
||||||||| || | || ||||||||||||||||||||||||||| |||||||
Sbjct: 26691 gcggagaaggccccggcggcggggaagaagcccaaggcggagaagcggctccccgc 26746
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 355 ttcatcaacgacatcttcgagaagct 380
|||||||||||||||| |||||||||
Sbjct: 991885 ttcatcaacgacatctccgagaagct 991860
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 474 bits (239), Expect = e-131
Identities = 284/299 (94%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 10826944 gaagaaggggaagaagagcgtggagacctacaagatctacatcttcaaggttctcaagca 10827003
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10827004 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 10827063
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 10827064 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 10827123
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 10827124 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 10827183
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 10827184 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggctt 10827242
Score = 317 bits (160), Expect = 5e-084
Identities = 262/296 (88%)
Strand = Plus / Plus
Query: 241 aagaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaag 300
|||||||||| ||||| ||||||||||| || || |||||||||||||||||||| |||
Sbjct: 4860717 aagaagaaggcgaagaaaagcgtggagacctataaaatctacatcttcaaggtgctcaag 4860776
Query: 301 caggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 360
|||||||| || ||||| || ||||||||||||||||||||||||||||| |||||| ||
Sbjct: 4860777 caggtgcatccagacataggaatctcctccaaggccatgtccatcatgaattccttcgtc 4860836
Query: 361 aacgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaag 420
|||||||| ||||||||||| | |||||||| | ||| || | ||||||||||||
Sbjct: 4860837 aacgacattttcgagaagctcgagcaggaggccgcgaggcttgccaggtacaacaagaag 4860896
Query: 421 cccaccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctc 480
||||| ||||| |||||||||||||||||||| || || ||||| ||||||||||||||
Sbjct: 4860897 cccacaatcacctcccgcgagatccagacctctgttcgtctcgtcctccccggcgagctt 4860956
Query: 481 gccaagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctccta 536
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4860957 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcctccta 4861012
Score = 139 bits (70), Expect = 3e-030
Identities = 105/116 (90%), Gaps = 3/116 (2%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 10826780 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 10826839
Query: 145 gcggagaag---acgaccgccgggaagaagcccaaggcggagaagcggatccccgc 197
||||||||| || | || ||||||||||||||||||||||||||| |||||||
Sbjct: 10826840 gcggagaaggccccggcggcggggaagaagcccaaggcggagaagcggctccccgc 10826895
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 272 acaagatctacatcttcaaggtg 294
|||||||||||||||||||||||
Sbjct: 7877619 acaagatctacatcttcaaggtg 7877597
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 355 ttcatcaacgacatcttcgagaagct 380
|||||||||||||||| |||||||||
Sbjct: 11772140 ttcatcaacgacatctccgagaagct 11772115
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 355 ttcatcaacgacatcttcgagaagct 380
||||| ||||||||||||||||||||
Sbjct: 849332 ttcattaacgacatcttcgagaagct 849357
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 474 bits (239), Expect = e-131
Identities = 284/299 (94%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 28127257 gaagaaggggaagaagagcgtggagacctacaagatctacatcttcaaggttctcaagca 28127316
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28127317 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 28127376
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 28127377 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 28127436
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 28127437 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 28127496
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 28127497 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggctt 28127555
Score = 317 bits (160), Expect = 5e-084
Identities = 262/296 (88%)
Strand = Plus / Plus
Query: 241 aagaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaag 300
|||||||||| ||||| ||||||||||| || || |||||||||||||||||||| |||
Sbjct: 22161030 aagaagaaggcgaagaaaagcgtggagacctataaaatctacatcttcaaggtgctcaag 22161089
Query: 301 caggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 360
|||||||| || ||||| || ||||||||||||||||||||||||||||| |||||| ||
Sbjct: 22161090 caggtgcatccagacataggaatctcctccaaggccatgtccatcatgaattccttcgtc 22161149
Query: 361 aacgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaag 420
|||||||| ||||||||||| | |||||||| | ||| || | ||||||||||||
Sbjct: 22161150 aacgacattttcgagaagctcgagcaggaggccgcgaggcttgccaggtacaacaagaag 22161209
Query: 421 cccaccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctc 480
||||| ||||| |||||||||||||||||||| || || ||||| ||||||||||||||
Sbjct: 22161210 cccacaatcacctcccgcgagatccagacctctgttcgtctcgtcctccccggcgagctt 22161269
Query: 481 gccaagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctccta 536
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 22161270 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcctccta 22161325
Score = 139 bits (70), Expect = 3e-030
Identities = 105/116 (90%), Gaps = 3/116 (2%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 28127093 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 28127152
Query: 145 gcggagaag---acgaccgccgggaagaagcccaaggcggagaagcggatccccgc 197
||||||||| || | || ||||||||||||||||||||||||||| |||||||
Sbjct: 28127153 gcggagaaggccccggcggcggggaagaagcccaaggcggagaagcggctccccgc 28127208
Score = 67.9 bits (34), Expect = 9e-009
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 340 tccatcatgaactccttcatcaacgacatcttcgagaa 377
||||||||||||||||||||||| ||||||||||||||
Sbjct: 8223401 tccatcatgaactccttcatcaatgacatcttcgagaa 8223364
Score = 65.9 bits (33), Expect = 3e-008
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 252 caagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcagg 304
||||||||| ||||||| ||||| ||||||||||||||||||| ||||||||
Sbjct: 6814365 caagaagagtatggagacctacaatatctacatcttcaaggtgcagaagcagg 6814313
Score = 52.0 bits (26), Expect = 5e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 355 ttcatcaacgacatcttcgagaagct 380
||||||||||||||||||||||||||
Sbjct: 3719881 ttcatcaacgacatcttcgagaagct 3719856
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 272 acaagatctacatcttcaaggtg 294
|||||||||||||||||||||||
Sbjct: 25177932 acaagatctacatcttcaaggtg 25177910
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 355 ttcatcaacgacatcttcgagaagct 380
|||||||||||||||| |||||||||
Sbjct: 29072453 ttcatcaacgacatctccgagaagct 29072428
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 355 ttcatcaacgacatcttcgagaagct 380
||||| ||||||||||||||||||||
Sbjct: 18149645 ttcattaacgacatcttcgagaagct 18149670
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 355 ttcatcaacgacatcttcgagaagct 380
|||||||| |||||||||||||||||
Sbjct: 6128326 ttcatcaaagacatcttcgagaagct 6128351
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 474 bits (239), Expect = e-131
Identities = 284/299 (94%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 28391871 gaagaaggggaagaagagcgtggagacctacaagatctacatcttcaaggttctcaagca 28391930
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28391931 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 28391990
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 28391991 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 28392050
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 28392051 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 28392110
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 28392111 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggctt 28392169
Score = 317 bits (160), Expect = 5e-084
Identities = 262/296 (88%)
Strand = Plus / Plus
Query: 241 aagaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaag 300
|||||||||| ||||| ||||||||||| || || |||||||||||||||||||| |||
Sbjct: 22480175 aagaagaaggcgaagaaaagcgtggagacctataaaatctacatcttcaaggtgctcaag 22480234
Query: 301 caggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 360
|||||||| || ||||| || ||||||||||||||||||||||||||||| |||||| ||
Sbjct: 22480235 caggtgcatccagacataggaatctcctccaaggccatgtccatcatgaattccttcgtc 22480294
Query: 361 aacgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaag 420
|||||||| ||||||||||| | |||||||| | ||| || | ||||||||||||
Sbjct: 22480295 aacgacattttcgagaagctcgagcaggaggccgcgaggcttgccaggtacaacaagaag 22480354
Query: 421 cccaccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctc 480
||||| ||||| |||||||||||||||||||| || || ||||| ||||||||||||||
Sbjct: 22480355 cccacaatcacctcccgcgagatccagacctctgttcgtctcgtcctccccggcgagctt 22480414
Query: 481 gccaagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctccta 536
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 22480415 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcctccta 22480470
Score = 139 bits (70), Expect = 3e-030
Identities = 105/116 (90%), Gaps = 3/116 (2%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 28391707 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 28391766
Query: 145 gcggagaag---acgaccgccgggaagaagcccaaggcggagaagcggatccccgc 197
||||||||| || | || ||||||||||||||||||||||||||| |||||||
Sbjct: 28391767 gcggagaaggccccggcggcggggaagaagcccaaggcggagaagcggctccccgc 28391822
Score = 65.9 bits (33), Expect = 3e-008
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 252 caagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcagg 304
||||||||| ||||||| ||||| ||||||||||||||||||| ||||||||
Sbjct: 6896207 caagaagagtatggagacctacaatatctacatcttcaaggtgcagaagcagg 6896155
Score = 52.0 bits (26), Expect = 5e-004
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 355 ttcatcaacgacatcttcgagaagct 380
||||||||||||||||||||||||||
Sbjct: 3720769 ttcatcaacgacatcttcgagaagct 3720744
Score = 46.1 bits (23), Expect = 0.031
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 272 acaagatctacatcttcaaggtg 294
|||||||||||||||||||||||
Sbjct: 25447133 acaagatctacatcttcaaggtg 25447111
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 355 ttcatcaacgacatcttcgagaagct 380
|||||||||||||||| |||||||||
Sbjct: 29356961 ttcatcaacgacatctccgagaagct 29356936
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 355 ttcatcaacgacatcttcgagaagct 380
||||| ||||||||||||||||||||
Sbjct: 18422063 ttcattaacgacatcttcgagaagct 18422088
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 355 ttcatcaacgacatcttcgagaagct 380
|||||||| |||||||||||||||||
Sbjct: 6238933 ttcatcaaagacatcttcgagaagct 6238958
>gb|CO436072.1|CO436072 OsMR994 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 885
Score = 470 bits (237), Expect = e-130
Identities = 276/289 (95%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 276 gaagaaggggaagaagagcgtggagacctacaagatctacatcttcaaggttctcaagca 335
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 395
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 396 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 455
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 456 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 515
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcc 531
||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 516 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcc 564
Score = 139 bits (70), Expect = 3e-030
Identities = 105/116 (90%), Gaps = 3/116 (2%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 112 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 171
Query: 145 gcggagaag---acgaccgccgggaagaagcccaaggcggagaagcggatccccgc 197
||||||||| || | || ||||||||||||||||||||||||||| |||||||
Sbjct: 172 gcggagaaggccccggcggcggggaagaagcccaaggcggagaagcggctccccgc 227
>ref|XM_475912.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 459
Score = 470 bits (237), Expect = e-130
Identities = 276/289 (95%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct: 165 gaagaaggggaagaagagcgtggagacctacaagatctacatcttcaaggttctcaagca 224
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 284
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 285 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 344
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 345 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 404
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcc 531
||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 405 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctcc 453
Score = 139 bits (70), Expect = 3e-030
Identities = 105/116 (90%), Gaps = 3/116 (2%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 1 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 60
Query: 145 gcggagaag---acgaccgccgggaagaagcccaaggcggagaagcggatccccgc 197
||||||||| || | || ||||||||||||||||||||||||||| |||||||
Sbjct: 61 gcggagaaggccccggcggcggggaagaagcccaaggcggagaagcggctccccgc 116
>gb|AU032007.1|AU032007 AU032007 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3125_8Z, mRNA sequence
Length = 581
Score = 462 bits (233), Expect = e-127
Identities = 282/299 (94%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||| | ||||||| ||||||||||||||||||||||| || |||||
Sbjct: 79 gaagaaggggaagaagancntggagacctacaagatctacatcttcaaggttctcaagca 138
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 198
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 199 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 258
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 259 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 318
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 319 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggctt 377
Score = 52.0 bits (26), Expect = 5e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 168 gaagcccaaggcggagaagcggatccccgc 197
|||||||||||||||||||||| |||||||
Sbjct: 1 gaagcccaaggcggagaagcggctccccgc 30
>gb|CF307934.1|CF307934 ABF--01-I21.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--01-I21, mRNA sequence
Length = 504
Score = 462 bits (233), Expect = e-127
Identities = 275/289 (95%)
Strand = Plus / Plus
Query: 253 aagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccg 312
||||||||||||||||| ||||||||||||||||||||||| || |||||||| |||||
Sbjct: 41 aagaagagcgtggagacctacaagatctacatcttcaaggttctcaagcaggtccacccc 100
Query: 313 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttc 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 gacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttc 160
Query: 373 gagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacg 432
|||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 161 gagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcccaccatcacc 220
Query: 433 tcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgcc 492
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 221 tcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgcc 280
Query: 493 gtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
||||| ||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 281 gtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggctt 329
>gb|CA998897.1|CA998897 S345N_D05 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 460
Score = 460 bits (232), Expect = e-127
Identities = 274/288 (95%)
Strand = Plus / Plus
Query: 254 agaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagcaggtgcacccgg 313
|||||||||||||||| ||||||||||||||||||||||| || |||||||| ||||| |
Sbjct: 1 agaagagcgtggagacctacaagatctacatcttcaaggttctcaagcaggtccaccccg 60
Query: 314 acatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acatcggcatctcctccaaggccatgtccatcatgaactccttcatcaacgacatcttcg 120
Query: 374 agaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcccaccatcacgt 433
||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 121 agaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcccaccatcacct 180
Query: 434 cccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgccaagcacgccg 493
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 181 cccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgccaagcacgccg 240
Query: 494 tctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
|||| ||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 241 tctccgagggcaccaaggccgtcaccaagttcacctccgcttaggctt 288
>gb|CA755827.1|CA755827 BR030029000_PLATE_B12_90_096.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030029000_PLATE_B12_90_096.ab1 similar to putative
histone H2B [Oryza sativa (japonica cultivar-group)],
mRNA sequence
Length = 636
Score = 456 bits (230), Expect = e-126
Identities = 281/299 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||||||||| ||| ||||||||||||||||||| || |||||
Sbjct: 206 gaagaaggggaagaagagcgtggagacctacnagatctacatcttcaaggttctcaagca 265
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 325
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||| ||||||| |||||||||||||||||
Sbjct: 326 cgacatcttcgagaagctcgccgccgaggccgccnagctcgcccgctacaacaagaagcc 385
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 386 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 445
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
| ||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 446 cnagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggctt 504
Score = 139 bits (70), Expect = 3e-030
Identities = 105/116 (90%), Gaps = 3/116 (2%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 42 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 101
Query: 145 gcggagaag---acgaccgccgggaagaagcccaaggcggagaagcggatccccgc 197
||||||||| || | || ||||||||||||||||||||||||||| |||||||
Sbjct: 102 gcggagaaggccccggcggcggggaagaagcccaaggcggagaagcggctccccgc 157
>gb|CF290947.1|CF290947 14ROOT--01-D01.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-D01, mRNA sequence
Length = 672
Score = 450 bits (227), Expect = e-124
Identities = 281/299 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 259 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 318
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ggttcaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 378
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 379 cgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagcc 438
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 439 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 498
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
||||||||||||||| ||||||||||||||||||||||| ||||||||| | |||||||
Sbjct: 499 caagcacgccgtctccgagggcaccaaggccgtcaccaaattcacctccgcttaggctt 557
Score = 97.6 bits (49), Expect = 1e-017
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 92 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgca 151
Query: 145 gcggagaag 153
|||||||||
Sbjct: 152 gcggagaag 160
>gb|CB662156.1|CB662156 OSJNEd05O18.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05O18 5', mRNA sequence
Length = 702
Score = 448 bits (226), Expect = e-123
Identities = 280/298 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 216 gaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 275
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 335
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 336 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 395
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||| ||
Sbjct: 396 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttgc 455
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 456 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacttcctcttaggct 513
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 49 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 108
Query: 145 gcggagaag 153
|||||||||
Sbjct: 109 gcggagaag 117
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 136 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 177
>gb|CB662157.1|CB662157 OSJNEd05O18.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05O18 3', mRNA sequence
Length = 827
Score = 448 bits (226), Expect = e-123
Identities = 280/298 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 539 gaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 480
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 420
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 419 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 360
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||| ||
Sbjct: 359 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttgc 300
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 299 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacttcctcttaggct 242
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 706 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 647
Query: 145 gcggagaag 153
|||||||||
Sbjct: 646 gcggagaag 638
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 619 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 578
>gb|CF278594.1|CF278594 14ETL--04-I24.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--04-I24, mRNA sequence
Length = 567
Score = 448 bits (226), Expect = e-123
Identities = 280/298 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 241 gaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 300
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 360
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 361 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 420
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||| ||
Sbjct: 421 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttgc 480
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 481 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacttcctcttaggct 538
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 74 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 133
Query: 145 gcggagaag 153
|||||||||
Sbjct: 134 gcggagaag 142
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 161 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 202
>gb|CF291164.1|CF291164 14ROOT--01-H18.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-H18, mRNA sequence
Length = 594
Score = 448 bits (226), Expect = e-123
Identities = 280/298 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 494 gaagaaggggaagaagagcgtcgagacttacaagatctacatcttcaaggtgctcaagca 435
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 375
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 374 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 315
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||| ||
Sbjct: 314 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttgc 255
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 254 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacttcctcttaggct 197
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 574 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 533
>gb|CF292227.1|CF292227 14ROOT--02-P16.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-P16, mRNA sequence
Length = 623
Score = 448 bits (226), Expect = e-123
Identities = 280/298 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 250 gaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 309
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 369
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 370 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 429
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||| ||
Sbjct: 430 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttgc 489
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 490 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacttcctcttaggct 547
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 83 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 142
Query: 145 gcggagaag 153
|||||||||
Sbjct: 143 gcggagaag 151
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 170 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 211
>gb|CF333473.1|CF333473 JMT--02-G04.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--02-G04, mRNA sequence
Length = 610
Score = 448 bits (226), Expect = e-123
Identities = 280/298 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 260 gaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 319
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 379
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 380 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 439
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||| ||
Sbjct: 440 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttgc 499
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 500 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacttcctcttaggct 557
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 93 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 152
Query: 145 gcggagaag 153
|||||||||
Sbjct: 153 gcggagaag 161
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 180 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 221
>gb|CV731987.1|CV731987 FLO--06-E06.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--06-E06,
mRNA sequence
Length = 493
Score = 448 bits (226), Expect = e-123
Identities = 280/298 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 492 gaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 433
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 373
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 372 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 313
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||| ||
Sbjct: 312 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttgc 253
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 252 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacttcctcttaggct 195
>dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0009G03
Length = 163526
Score = 448 bits (226), Expect = e-123
Identities = 280/298 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 162569 gaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 162510
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162509 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 162450
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 162449 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 162390
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||| ||
Sbjct: 162389 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttgc 162330
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 162329 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacttcctcttaggct 162272
Score = 432 bits (218), Expect = e-118
Identities = 278/298 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 143017 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 142958
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142957 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 142898
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|| |||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 142897 tgatatcttcgagaagctcgccggagagtccgccaagctcgcgcgctacaacaagaagcc 142838
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||||||
Sbjct: 142837 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagctcgc 142778
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 142777 caagcacgccgtctccgagggcaccaaggccgttaccaagttcacttcctcctaggct 142720
Score = 430 bits (217), Expect = e-118
Identities = 271/289 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 125206 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 125147
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125146 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 125087
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 125086 cgacatcttcgagaagctcgccggggagtccgccaagctcgcgcgctacaacaagaagcc 125027
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| || || ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 125026 caccatcacctcacgggagatccagacctccgtccgcctcgtcctccccggcgagctcgc 124967
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcc 531
||||||||||||||| |||||||||||||| || |||||||||||||||
Sbjct: 124966 caagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctcc 124918
Score = 424 bits (214), Expect = e-116
Identities = 265/282 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 149630 gaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 149571
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149570 ggttcaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 149511
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 149510 cgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagcc 149451
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| ||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 149450 caccatcacctcccgggagattcagacctccgtccgcctcgtcctccccggcgagctcgc 149391
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagtt 524
||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 149390 caagcacgccgtctccgagggcacgaaggccgtcaccaagtt 149349
Score = 113 bits (57), Expect = 2e-022
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 143184 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 143125
Query: 145 gcggagaag 153
|||||||||
Sbjct: 143124 gcggagaag 143116
Score = 113 bits (57), Expect = 2e-022
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 125373 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 125314
Query: 145 gcggagaag 153
|||||||||
Sbjct: 125313 gcggagaag 125305
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 162736 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 162677
Query: 145 gcggagaag 153
|||||||||
Sbjct: 162676 gcggagaag 162668
Score = 97.6 bits (49), Expect = 1e-017
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgc- 143
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 149797 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 149738
Query: 144 --------ggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 149737 gcagagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 149678
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 149677 gccggcaag 149669
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 162649 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 162608
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 143097 gggaagaagcccaaggcggagaagcgcctccccgccggcaag 143056
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 125286 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 125245
>dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0030H07
Length = 168253
Score = 448 bits (226), Expect = e-123
Identities = 280/298 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 63890 gaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 63831
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63830 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 63771
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 63770 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 63711
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||| ||
Sbjct: 63710 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttgc 63651
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 63650 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacttcctcttaggct 63593
Score = 440 bits (222), Expect = e-121
Identities = 279/298 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 78359 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 78418
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78419 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 78478
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 78479 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 78538
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 78539 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagcttgc 78598
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| |||||||||||||| || ||||||||||||||| | ||||||
Sbjct: 78599 caagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctccgcttaggct 78656
Score = 432 bits (218), Expect = e-118
Identities = 278/298 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 44338 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 44279
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44278 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 44219
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|| |||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 44218 tgatatcttcgagaagctcgccggagagtccgccaagctcgcgcgctacaacaagaagcc 44159
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||||||
Sbjct: 44158 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagctcgc 44099
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 44098 caagcacgccgtctccgagggcaccaaggccgttaccaagttcacttcctcctaggct 44041
Score = 430 bits (217), Expect = e-118
Identities = 271/289 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 26527 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 26468
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26467 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 26408
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 26407 cgacatcttcgagaagctcgccggggagtccgccaagctcgcgcgctacaacaagaagcc 26348
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| || || ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 26347 caccatcacctcacgggagatccagacctccgtccgcctcgtcctccccggcgagctcgc 26288
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcc 531
||||||||||||||| |||||||||||||| || |||||||||||||||
Sbjct: 26287 caagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctcc 26239
Score = 424 bits (214), Expect = e-116
Identities = 265/282 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 50951 gaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 50892
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50891 ggttcaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 50832
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 50831 cgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagcc 50772
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| ||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 50771 caccatcacctcccgggagattcagacctccgtccgcctcgtcctccccggcgagctcgc 50712
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagtt 524
||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 50711 caagcacgccgtctccgagggcacgaaggccgtcaccaagtt 50670
Score = 113 bits (57), Expect = 2e-022
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 44505 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 44446
Query: 145 gcggagaag 153
|||||||||
Sbjct: 44445 gcggagaag 44437
Score = 113 bits (57), Expect = 2e-022
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 26694 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 26635
Query: 145 gcggagaag 153
|||||||||
Sbjct: 26634 gcggagaag 26626
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 78186 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 78245
Query: 145 gcggagaag 153
|||||||||
Sbjct: 78246 gcggagaag 78254
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 64057 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 63998
Query: 145 gcggagaag 153
|||||||||
Sbjct: 63997 gcggagaag 63989
Score = 97.6 bits (49), Expect = 1e-017
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgc- 143
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 51118 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 51059
Query: 144 --------ggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 51058 gcagagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 50999
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 50998 gccggcaag 50990
Score = 73.8 bits (37), Expect = 1e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 160 gccgggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 78270 gccgggaagaagcccaaggcggagaagcggctccccgccggcaag 78314
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 63970 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 63929
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 44418 gggaagaagcccaaggcggagaagcgcctccccgccggcaag 44377
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 26607 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 26566
>gb|AACV01000215.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000215, whole
genome shotgun sequence
Length = 50442
Score = 448 bits (226), Expect = e-123
Identities = 280/298 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 13016 gaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 12957
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12956 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 12897
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 12896 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 12837
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||| ||
Sbjct: 12836 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttgc 12777
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 12776 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacttcctcttaggct 12719
Score = 440 bits (222), Expect = e-121
Identities = 279/298 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 27485 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 27544
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27545 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 27604
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 27605 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 27664
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 27665 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagcttgc 27724
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| |||||||||||||| || ||||||||||||||| | ||||||
Sbjct: 27725 caagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctccgcttaggct 27782
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 27312 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 27371
Query: 145 gcggagaag 153
|||||||||
Sbjct: 27372 gcggagaag 27380
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 13183 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 13124
Query: 145 gcggagaag 153
|||||||||
Sbjct: 13123 gcggagaag 13115
Score = 97.6 bits (49), Expect = 1e-017
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgc- 143
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 241 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 182
Query: 144 --------ggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 181 gcagagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 122
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 121 gccggcaag 113
Score = 81.8 bits (41), Expect = 6e-013
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| || |||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 74 gaagaaggggaacaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 15
Query: 303 g 303
|
Sbjct: 14 g 14
Score = 73.8 bits (37), Expect = 1e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 160 gccgggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 27396 gccgggaagaagcccaaggcggagaagcggctccccgccggcaag 27440
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 13096 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 13055
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 448 bits (226), Expect = e-123
Identities = 280/298 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2854694 gaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2854635
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2854634 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2854575
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 2854574 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 2854515
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||| ||
Sbjct: 2854514 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttgc 2854455
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 2854454 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacttcctcttaggct 2854397
Score = 442 bits (223), Expect = e-121
Identities = 280/299 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2671448 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2671507
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2671508 ggtccaccccgatatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2671567
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 2671568 cgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagcc 2671627
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2671628 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 2671687
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
||||||||||||||| ||||||||||||||||||||||| ||||||||| | |||||||
Sbjct: 2671688 caagcacgccgtctccgagggcaccaaggccgtcaccaaattcacctccgcttaggctt 2671746
Score = 440 bits (222), Expect = e-121
Identities = 279/298 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2869163 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2869222
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2869223 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2869282
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 2869283 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 2869342
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 2869343 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagcttgc 2869402
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| |||||||||||||| || ||||||||||||||| | ||||||
Sbjct: 2869403 caagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctccgcttaggct 2869460
Score = 434 bits (219), Expect = e-119
Identities = 279/299 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2683771 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2683830
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2683831 ggttcaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2683890
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 2683891 tgacatcttcgagaagctcgccggagagtccgccaagctcgcccgctacaacaagaagcc 2683950
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2683951 caccatcacctcccgggagatccagacctccgtccgcctcgtcctccccggcgagctcgc 2684010
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
|||||||||||||||||||||||||||||||||||| || ||||||||| | |||||||
Sbjct: 2684011 caagcacgccgtctctgagggcaccaaggccgtcactaaattcacctccgcttaggctt 2684069
Score = 432 bits (218), Expect = e-118
Identities = 278/298 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2835142 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2835083
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2835082 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2835023
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|| |||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 2835022 tgatatcttcgagaagctcgccggagagtccgccaagctcgcgcgctacaacaagaagcc 2834963
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||||||
Sbjct: 2834962 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagctcgc 2834903
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 2834902 caagcacgccgtctccgagggcaccaaggccgttaccaagttcacttcctcctaggct 2834845
Score = 430 bits (217), Expect = e-118
Identities = 271/289 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2817331 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2817272
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2817271 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2817212
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 2817211 cgacatcttcgagaagctcgccggggagtccgccaagctcgcgcgctacaacaagaagcc 2817152
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| || || ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2817151 caccatcacctcacgggagatccagacctccgtccgcctcgtcctccccggcgagctcgc 2817092
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcc 531
||||||||||||||| |||||||||||||| || |||||||||||||||
Sbjct: 2817091 caagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctcc 2817043
Score = 424 bits (214), Expect = e-116
Identities = 265/282 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2841755 gaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2841696
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2841695 ggttcaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2841636
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 2841635 cgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagcc 2841576
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| ||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 2841575 caccatcacctcccgggagattcagacctccgtccgcctcgtcctccccggcgagctcgc 2841516
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagtt 524
||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2841515 caagcacgccgtctccgagggcacgaaggccgtcaccaagtt 2841474
Score = 361 bits (182), Expect = 4e-097
Identities = 236/254 (92%)
Strand = Plus / Minus
Query: 275 agatctacatcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaagg 334
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 17500704 agatctacatcttcaaggtcctgaagcaggtgcacccggacatcggcatctcctccaagg 17500645
Query: 335 ccatgtccatcatgaactccttcatcaacgacatcttcgagaagctggccggcgaggccg 394
||||||| |||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 17500644 ccatgtcgatcatgaactccttcatcaacgacatcttcgagaagctcgcgcaggaggccg 17500585
Query: 395 ccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcgagatccagacctccg 454
|| | ||||| ||||||||||||||||||| | ||| |||||||||||| |||||||||
Sbjct: 17500584 cccacctcgcccgctacaacaagaagcccatcgccacctcccgcgagatctagacctccg 17500525
Query: 455 tgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctgagggcaccaaggccg 514
| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 17500524 tccgcctcgtcctccccggcgagctcgccaagcacgccgtctccgagggcaccaaggccg 17500465
Query: 515 tcaccaagttcacc 528
||||||||||||||
Sbjct: 17500464 tcaccaagttcacc 17500451
Score = 339 bits (171), Expect = 1e-090
Identities = 258/287 (89%)
Strand = Plus / Minus
Query: 241 aagaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaag 300
|||||||||| |||||||||||| || || || ||||||||||| |||||||| || |||
Sbjct: 36088398 aagaagaaggccaagaagagcgtcgaaacttataagatctacattttcaaggtcctcaag 36088339
Query: 301 caggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 360
|||||||| || || ||||| || || |||||||||||||| ||||||||||| ||||||
Sbjct: 36088338 caggtgcatcccgatatcgggatatcgtccaaggccatgtcgatcatgaactcgttcatc 36088279
Query: 361 aacgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaag 420
||||| |||||||||||||| ||| ||||||||| ||||| |||||||||||||||
Sbjct: 36088278 aacgatatcttcgagaagctcgcccaggaggccgcccgtctcgcccgctacaacaagaag 36088219
Query: 421 cccaccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctc 480
|| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 36088218 ccgaccatcacctcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctc 36088159
Query: 481 gccaagcacgccgtctctgagggcaccaaggccgtcaccaagttcac 527
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36088158 gccaagcacgccgtctctgagggcaccaaggccgtcaccaagttcac 36088112
Score = 113 bits (57), Expect = 2e-022
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 2835309 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 2835250
Query: 145 gcggagaag 153
|||||||||
Sbjct: 2835249 gcggagaag 2835241
Score = 113 bits (57), Expect = 2e-022
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 2817498 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 2817439
Query: 145 gcggagaag 153
|||||||||
Sbjct: 2817438 gcggagaag 2817430
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 2868990 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 2869049
Query: 145 gcggagaag 153
|||||||||
Sbjct: 2869050 gcggagaag 2869058
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 2854861 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 2854802
Query: 145 gcggagaag 153
|||||||||
Sbjct: 2854801 gcggagaag 2854793
Score = 105 bits (53), Expect = 4e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 2671281 atggcgcccaaggcagagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 2671340
Query: 145 gcg---------gagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 2671341 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 2671400
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 2671401 gccggcaag 2671409
Score = 97.6 bits (49), Expect = 1e-017
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgc- 143
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 2841922 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 2841863
Query: 144 --------ggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 2841862 gcagagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 2841803
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 2841802 gccggcaag 2841794
Score = 97.6 bits (49), Expect = 1e-017
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 2683604 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgca 2683663
Query: 145 gcg---------gagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 2683664 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 2683723
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 2683724 gccggcaag 2683732
Score = 83.8 bits (42), Expect = 1e-013
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 82 ccgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggag 135
||||||||||||||||| |||||||||||||||| ||||||||||| |||||||
Sbjct: 36088524 ccgatggcgcccaaggcggagaagaagcccgcggagaagaagccggtggaggag 36088471
Score = 73.8 bits (37), Expect = 1e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 160 gccgggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 2869074 gccgggaagaagcccaaggcggagaagcggctccccgccggcaag 2869118
Score = 65.9 bits (33), Expect = 3e-008
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 332 aggccatgtccatcatgaactccttcatcaacgacatcttcgagaagct 380
|||||||||| |||||||| ||||||||||||||| | |||||||||||
Sbjct: 31022845 aggccatgtctatcatgaaatccttcatcaacgacgttttcgagaagct 31022797
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 2854774 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 2854733
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 2835222 gggaagaagcccaaggcggagaagcgcctccccgccggcaag 2835181
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 2817411 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 2817370
Score = 56.0 bits (28), Expect = 3e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 82 ccgatggcgcccaaggccgagaagaagcccgcggcgaagaagcc 125
||||||||||||||||| ||||||||||| | || |||||||||
Sbjct: 17500843 ccgatggcgcccaaggcagagaagaagccggtggagaagaagcc 17500800
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 270 gtacaagatctacatcttcaaggtgctgaagca 302
|||||||||| ||||||||||||||| ||||||
Sbjct: 30557157 gtacaagatcaacatcttcaaggtgcagaagca 30557189
Score = 50.1 bits (25), Expect = 0.002
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 165 gaagaagcccaaggcggagaagcgg 189
|||||||||||||||||||||||||
Sbjct: 17500808 gaagaagcccaaggcggagaagcgg 17500784
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 258 gagcgtggagacgtacaagatctacatctt 287
||||||||| | ||||||||||||||||||
Sbjct: 19964569 gagcgtggaaatgtacaagatctacatctt 19964540
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 271 tacaagatctacatcttcaaggtgct 296
||||||||||| ||||||||||||||
Sbjct: 12267560 tacaagatctatatcttcaaggtgct 12267585
Score = 42.1 bits (21), Expect = 0.49
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 165 gaagaagcccaaggcggagaagcgg 189
||||||||||||||| |||||||||
Sbjct: 36088462 gaagaagcccaaggccgagaagcgg 36088438
Score = 42.1 bits (21), Expect = 0.49
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 349 aactccttcatcaacgacatcttcgagaa 377
||||| |||||||||||||||||| ||||
Sbjct: 78089 aactcattcatcaacgacatcttcaagaa 78061
>ref|NT_036312.3| Oryza sativa (japonica cultivar-group)
Length = 10050053
Score = 448 bits (226), Expect = e-123
Identities = 280/298 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2854694 gaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2854635
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2854634 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2854575
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 2854574 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 2854515
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||| ||
Sbjct: 2854514 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttgc 2854455
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 2854454 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacttcctcttaggct 2854397
Score = 442 bits (223), Expect = e-121
Identities = 280/299 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2671448 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2671507
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2671508 ggtccaccccgatatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2671567
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 2671568 cgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagcc 2671627
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2671628 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 2671687
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
||||||||||||||| ||||||||||||||||||||||| ||||||||| | |||||||
Sbjct: 2671688 caagcacgccgtctccgagggcaccaaggccgtcaccaaattcacctccgcttaggctt 2671746
Score = 440 bits (222), Expect = e-121
Identities = 279/298 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2869163 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2869222
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2869223 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2869282
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 2869283 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 2869342
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 2869343 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagcttgc 2869402
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| |||||||||||||| || ||||||||||||||| | ||||||
Sbjct: 2869403 caagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctccgcttaggct 2869460
Score = 434 bits (219), Expect = e-119
Identities = 279/299 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2683771 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2683830
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2683831 ggttcaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2683890
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 2683891 tgacatcttcgagaagctcgccggagagtccgccaagctcgcccgctacaacaagaagcc 2683950
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2683951 caccatcacctcccgggagatccagacctccgtccgcctcgtcctccccggcgagctcgc 2684010
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
|||||||||||||||||||||||||||||||||||| || ||||||||| | |||||||
Sbjct: 2684011 caagcacgccgtctctgagggcaccaaggccgtcactaaattcacctccgcttaggctt 2684069
Score = 432 bits (218), Expect = e-118
Identities = 278/298 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2835142 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2835083
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2835082 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2835023
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|| |||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 2835022 tgatatcttcgagaagctcgccggagagtccgccaagctcgcgcgctacaacaagaagcc 2834963
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||||||
Sbjct: 2834962 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagctcgc 2834903
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 2834902 caagcacgccgtctccgagggcaccaaggccgttaccaagttcacttcctcctaggct 2834845
Score = 430 bits (217), Expect = e-118
Identities = 271/289 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2817331 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2817272
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2817271 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2817212
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 2817211 cgacatcttcgagaagctcgccggggagtccgccaagctcgcgcgctacaacaagaagcc 2817152
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| || || ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2817151 caccatcacctcacgggagatccagacctccgtccgcctcgtcctccccggcgagctcgc 2817092
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcc 531
||||||||||||||| |||||||||||||| || |||||||||||||||
Sbjct: 2817091 caagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctcc 2817043
Score = 424 bits (214), Expect = e-116
Identities = 265/282 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2841755 gaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2841696
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2841695 ggttcaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2841636
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 2841635 cgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagcc 2841576
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| ||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 2841575 caccatcacctcccgggagattcagacctccgtccgcctcgtcctccccggcgagctcgc 2841516
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagtt 524
||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2841515 caagcacgccgtctccgagggcacgaaggccgtcaccaagtt 2841474
Score = 113 bits (57), Expect = 2e-022
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 2835309 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 2835250
Query: 145 gcggagaag 153
|||||||||
Sbjct: 2835249 gcggagaag 2835241
Score = 113 bits (57), Expect = 2e-022
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 2817498 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 2817439
Query: 145 gcggagaag 153
|||||||||
Sbjct: 2817438 gcggagaag 2817430
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 2868990 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 2869049
Query: 145 gcggagaag 153
|||||||||
Sbjct: 2869050 gcggagaag 2869058
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 2854861 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 2854802
Query: 145 gcggagaag 153
|||||||||
Sbjct: 2854801 gcggagaag 2854793
Score = 105 bits (53), Expect = 4e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 2671281 atggcgcccaaggcagagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 2671340
Query: 145 gcg---------gagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 2671341 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 2671400
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 2671401 gccggcaag 2671409
Score = 97.6 bits (49), Expect = 1e-017
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgc- 143
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 2841922 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 2841863
Query: 144 --------ggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 2841862 gcagagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 2841803
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 2841802 gccggcaag 2841794
Score = 97.6 bits (49), Expect = 1e-017
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 2683604 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgca 2683663
Query: 145 gcg---------gagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 2683664 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 2683723
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 2683724 gccggcaag 2683732
Score = 73.8 bits (37), Expect = 1e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 160 gccgggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 2869074 gccgggaagaagcccaaggcggagaagcggctccccgccggcaag 2869118
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 2854774 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 2854733
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 2835222 gggaagaagcccaaggcggagaagcgcctccccgccggcaag 2835181
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 2817411 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 2817370
Score = 42.1 bits (21), Expect = 0.49
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 349 aactccttcatcaacgacatcttcgagaa 377
||||| |||||||||||||||||| ||||
Sbjct: 78089 aactcattcatcaacgacatcttcaagaa 78061
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 448 bits (226), Expect = e-123
Identities = 280/298 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2914631 gaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2914572
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2914571 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2914512
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 2914511 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 2914452
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||| ||
Sbjct: 2914451 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttgc 2914392
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 2914391 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacttcctcttaggct 2914334
Score = 442 bits (223), Expect = e-121
Identities = 280/299 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2730702 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2730761
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2730762 ggtccaccccgatatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2730821
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 2730822 cgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagcc 2730881
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2730882 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 2730941
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
||||||||||||||| ||||||||||||||||||||||| ||||||||| | |||||||
Sbjct: 2730942 caagcacgccgtctccgagggcaccaaggccgtcaccaaattcacctccgcttaggctt 2731000
Score = 440 bits (222), Expect = e-121
Identities = 279/298 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2929100 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2929159
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2929160 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2929219
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 2929220 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 2929279
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 2929280 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagcttgc 2929339
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| |||||||||||||| || ||||||||||||||| | ||||||
Sbjct: 2929340 caagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctccgcttaggct 2929397
Score = 434 bits (219), Expect = e-119
Identities = 279/299 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2743211 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2743270
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2743271 ggttcaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2743330
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 2743331 tgacatcttcgagaagctcgccggagagtccgccaagctcgcccgctacaacaagaagcc 2743390
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2743391 caccatcacctcccgggagatccagacctccgtccgcctcgtcctccccggcgagctcgc 2743450
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
|||||||||||||||||||||||||||||||||||| || ||||||||| | |||||||
Sbjct: 2743451 caagcacgccgtctctgagggcaccaaggccgtcactaaattcacctccgcttaggctt 2743509
Score = 432 bits (218), Expect = e-118
Identities = 278/298 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2895132 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2895073
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2895072 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2895013
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|| |||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 2895012 tgatatcttcgagaagctcgccggagagtccgccaagctcgcgcgctacaacaagaagcc 2894953
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||||||
Sbjct: 2894952 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagctcgc 2894893
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 2894892 caagcacgccgtctccgagggcaccaaggccgttaccaagttcacttcctcctaggct 2894835
Score = 430 bits (217), Expect = e-118
Identities = 271/289 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2874484 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2874425
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2874424 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2874365
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 2874364 cgacatcttcgagaagctcgccggggagtccgccaagctcgcgcgctacaacaagaagcc 2874305
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| || || ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2874304 caccatcacctcacgggagatccagacctccgtccgcctcgtcctccccggcgagctcgc 2874245
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcc 531
||||||||||||||| |||||||||||||| || |||||||||||||||
Sbjct: 2874244 caagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctcc 2874196
Score = 113 bits (57), Expect = 2e-022
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 2895299 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 2895240
Query: 145 gcggagaag 153
|||||||||
Sbjct: 2895239 gcggagaag 2895231
Score = 113 bits (57), Expect = 2e-022
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 2874651 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 2874592
Query: 145 gcggagaag 153
|||||||||
Sbjct: 2874591 gcggagaag 2874583
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 2928927 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 2928986
Query: 145 gcggagaag 153
|||||||||
Sbjct: 2928987 gcggagaag 2928995
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 2914798 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 2914739
Query: 145 gcggagaag 153
|||||||||
Sbjct: 2914738 gcggagaag 2914730
Score = 105 bits (53), Expect = 4e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 2730535 atggcgcccaaggcagagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 2730594
Query: 145 gcg---------gagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 2730595 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 2730654
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 2730655 gccggcaag 2730663
Score = 97.6 bits (49), Expect = 1e-017
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgc- 143
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 2901856 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 2901797
Query: 144 --------ggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 2901796 gcagagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 2901737
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 2901736 gccggcaag 2901728
Score = 97.6 bits (49), Expect = 1e-017
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 2743044 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgca 2743103
Query: 145 gcg---------gagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 2743104 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 2743163
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 2743164 gccggcaag 2743172
Score = 85.7 bits (43), Expect = 4e-014
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 474 cgagctcgccaagcacgccgtctctgagggcaccaaggccgtcaccaagtt 524
|||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2901515 cgagctcgccaagcacgccgtctccgagggcacgaaggccgtcaccaagtt 2901465
Score = 81.8 bits (41), Expect = 6e-013
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| || |||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2901689 gaagaaggggaacaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2901630
Query: 303 g 303
|
Sbjct: 2901629 g 2901629
Score = 73.8 bits (37), Expect = 1e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 160 gccgggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 2929011 gccgggaagaagcccaaggcggagaagcggctccccgccggcaag 2929055
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 2914711 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 2914670
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 2895212 gggaagaagcccaaggcggagaagcgcctccccgccggcaag 2895171
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 2874564 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 2874523
Score = 42.1 bits (21), Expect = 0.49
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 349 aactccttcatcaacgacatcttcgagaa 377
||||| |||||||||||||||||| ||||
Sbjct: 75441 aactcattcatcaacgacatcttcaagaa 75413
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 448 bits (226), Expect = e-123
Identities = 280/298 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2914631 gaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2914572
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2914571 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2914512
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 2914511 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 2914452
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||| ||
Sbjct: 2914451 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttgc 2914392
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 2914391 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacttcctcttaggct 2914334
Score = 442 bits (223), Expect = e-121
Identities = 280/299 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2730702 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2730761
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2730762 ggtccaccccgatatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2730821
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 2730822 cgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagcc 2730881
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2730882 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 2730941
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
||||||||||||||| ||||||||||||||||||||||| ||||||||| | |||||||
Sbjct: 2730942 caagcacgccgtctccgagggcaccaaggccgtcaccaaattcacctccgcttaggctt 2731000
Score = 440 bits (222), Expect = e-121
Identities = 279/298 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2929100 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2929159
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2929160 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2929219
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 2929220 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 2929279
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 2929280 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagcttgc 2929339
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| |||||||||||||| || ||||||||||||||| | ||||||
Sbjct: 2929340 caagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctccgcttaggct 2929397
Score = 434 bits (219), Expect = e-119
Identities = 279/299 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2743211 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2743270
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2743271 ggttcaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2743330
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 2743331 tgacatcttcgagaagctcgccggagagtccgccaagctcgcccgctacaacaagaagcc 2743390
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2743391 caccatcacctcccgggagatccagacctccgtccgcctcgtcctccccggcgagctcgc 2743450
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
|||||||||||||||||||||||||||||||||||| || ||||||||| | |||||||
Sbjct: 2743451 caagcacgccgtctctgagggcaccaaggccgtcactaaattcacctccgcttaggctt 2743509
Score = 432 bits (218), Expect = e-118
Identities = 278/298 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2895132 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2895073
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2895072 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2895013
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|| |||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 2895012 tgatatcttcgagaagctcgccggagagtccgccaagctcgcgcgctacaacaagaagcc 2894953
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||||||
Sbjct: 2894952 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagctcgc 2894893
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 2894892 caagcacgccgtctccgagggcaccaaggccgttaccaagttcacttcctcctaggct 2894835
Score = 430 bits (217), Expect = e-118
Identities = 271/289 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2874484 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2874425
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2874424 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2874365
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 2874364 cgacatcttcgagaagctcgccggggagtccgccaagctcgcgcgctacaacaagaagcc 2874305
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| || || ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2874304 caccatcacctcacgggagatccagacctccgtccgcctcgtcctccccggcgagctcgc 2874245
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcc 531
||||||||||||||| |||||||||||||| || |||||||||||||||
Sbjct: 2874244 caagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctcc 2874196
Score = 361 bits (182), Expect = 4e-097
Identities = 236/254 (92%)
Strand = Plus / Minus
Query: 275 agatctacatcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaagg 334
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 17079407 agatctacatcttcaaggtcctgaagcaggtgcacccggacatcggcatctcctccaagg 17079348
Query: 335 ccatgtccatcatgaactccttcatcaacgacatcttcgagaagctggccggcgaggccg 394
||||||| |||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 17079347 ccatgtcgatcatgaactccttcatcaacgacatcttcgagaagctcgcgcaggaggccg 17079288
Query: 395 ccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcgagatccagacctccg 454
|| | ||||| ||||||||||||||||||| | ||| |||||||||||| |||||||||
Sbjct: 17079287 cccacctcgcccgctacaacaagaagcccatcgccacctcccgcgagatctagacctccg 17079228
Query: 455 tgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctgagggcaccaaggccg 514
| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 17079227 tccgcctcgtcctccccggcgagctcgccaagcacgccgtctccgagggcaccaaggccg 17079168
Query: 515 tcaccaagttcacc 528
||||||||||||||
Sbjct: 17079167 tcaccaagttcacc 17079154
Score = 339 bits (171), Expect = 1e-090
Identities = 258/287 (89%)
Strand = Plus / Minus
Query: 241 aagaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaag 300
|||||||||| |||||||||||| || || || ||||||||||| |||||||| || |||
Sbjct: 35483666 aagaagaaggccaagaagagcgtcgaaacttataagatctacattttcaaggtcctcaag 35483607
Query: 301 caggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 360
|||||||| || || ||||| || || |||||||||||||| ||||||||||| ||||||
Sbjct: 35483606 caggtgcatcccgatatcgggatatcgtccaaggccatgtcgatcatgaactcgttcatc 35483547
Query: 361 aacgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaag 420
||||| |||||||||||||| ||| ||||||||| ||||| |||||||||||||||
Sbjct: 35483546 aacgatatcttcgagaagctcgcccaggaggccgcccgtctcgcccgctacaacaagaag 35483487
Query: 421 cccaccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctc 480
|| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 35483486 ccgaccatcacctcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctc 35483427
Query: 481 gccaagcacgccgtctctgagggcaccaaggccgtcaccaagttcac 527
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35483426 gccaagcacgccgtctctgagggcaccaaggccgtcaccaagttcac 35483380
Score = 113 bits (57), Expect = 2e-022
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 2895299 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 2895240
Query: 145 gcggagaag 153
|||||||||
Sbjct: 2895239 gcggagaag 2895231
Score = 113 bits (57), Expect = 2e-022
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 2874651 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 2874592
Query: 145 gcggagaag 153
|||||||||
Sbjct: 2874591 gcggagaag 2874583
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 2928927 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 2928986
Query: 145 gcggagaag 153
|||||||||
Sbjct: 2928987 gcggagaag 2928995
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 2914798 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 2914739
Query: 145 gcggagaag 153
|||||||||
Sbjct: 2914738 gcggagaag 2914730
Score = 105 bits (53), Expect = 4e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 2730535 atggcgcccaaggcagagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 2730594
Query: 145 gcg---------gagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 2730595 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 2730654
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 2730655 gccggcaag 2730663
Score = 97.6 bits (49), Expect = 1e-017
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgc- 143
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 2901856 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 2901797
Query: 144 --------ggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 2901796 gcagagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 2901737
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 2901736 gccggcaag 2901728
Score = 97.6 bits (49), Expect = 1e-017
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 2743044 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgca 2743103
Query: 145 gcg---------gagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 2743104 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 2743163
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 2743164 gccggcaag 2743172
Score = 85.7 bits (43), Expect = 4e-014
Identities = 49/51 (96%)
Strand = Plus / Minus
Query: 474 cgagctcgccaagcacgccgtctctgagggcaccaaggccgtcaccaagtt 524
|||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2901515 cgagctcgccaagcacgccgtctccgagggcacgaaggccgtcaccaagtt 2901465
Score = 83.8 bits (42), Expect = 1e-013
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 82 ccgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggag 135
||||||||||||||||| |||||||||||||||| ||||||||||| |||||||
Sbjct: 35483792 ccgatggcgcccaaggcggagaagaagcccgcggagaagaagccggtggaggag 35483739
Score = 81.8 bits (41), Expect = 6e-013
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| || |||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2901689 gaagaaggggaacaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2901630
Query: 303 g 303
|
Sbjct: 2901629 g 2901629
Score = 73.8 bits (37), Expect = 1e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 160 gccgggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 2929011 gccgggaagaagcccaaggcggagaagcggctccccgccggcaag 2929055
Score = 65.9 bits (33), Expect = 3e-008
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 332 aggccatgtccatcatgaactccttcatcaacgacatcttcgagaagct 380
|||||||||| |||||||| ||||||||||||||| | |||||||||||
Sbjct: 30573992 aggccatgtctatcatgaaatccttcatcaacgacgttttcgagaagct 30573944
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 2914711 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 2914670
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 2895212 gggaagaagcccaaggcggagaagcgcctccccgccggcaag 2895171
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 2874564 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 2874523
Score = 56.0 bits (28), Expect = 3e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 82 ccgatggcgcccaaggccgagaagaagcccgcggcgaagaagcc 125
||||||||||||||||| ||||||||||| | || |||||||||
Sbjct: 17079546 ccgatggcgcccaaggcagagaagaagccggtggagaagaagcc 17079503
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 270 gtacaagatctacatcttcaaggtgctgaagca 302
|||||||||| ||||||||||||||| ||||||
Sbjct: 30140085 gtacaagatcaacatcttcaaggtgcagaagca 30140117
Score = 50.1 bits (25), Expect = 0.002
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 165 gaagaagcccaaggcggagaagcgg 189
|||||||||||||||||||||||||
Sbjct: 17079511 gaagaagcccaaggcggagaagcgg 17079487
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 258 gagcgtggagacgtacaagatctacatctt 287
||||||||| | ||||||||||||||||||
Sbjct: 19539336 gagcgtggaaatgtacaagatctacatctt 19539307
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 271 tacaagatctacatcttcaaggtgct 296
||||||||||| ||||||||||||||
Sbjct: 12266784 tacaagatctatatcttcaaggtgct 12266809
Score = 42.1 bits (21), Expect = 0.49
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 165 gaagaagcccaaggcggagaagcgg 189
||||||||||||||| |||||||||
Sbjct: 35483730 gaagaagcccaaggccgagaagcgg 35483706
Score = 42.1 bits (21), Expect = 0.49
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 349 aactccttcatcaacgacatcttcgagaa 377
||||| |||||||||||||||||| ||||
Sbjct: 75441 aactcattcatcaacgacatcttcaagaa 75413
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 448 bits (226), Expect = e-123
Identities = 280/298 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2856892 gaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2856833
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2856832 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2856773
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 2856772 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 2856713
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||| ||
Sbjct: 2856712 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttgc 2856653
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 2856652 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacttcctcttaggct 2856595
Score = 442 bits (223), Expect = e-121
Identities = 280/299 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2673646 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2673705
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2673706 ggtccaccccgatatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2673765
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 2673766 cgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagcc 2673825
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2673826 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 2673885
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
||||||||||||||| ||||||||||||||||||||||| ||||||||| | |||||||
Sbjct: 2673886 caagcacgccgtctccgagggcaccaaggccgtcaccaaattcacctccgcttaggctt 2673944
Score = 440 bits (222), Expect = e-121
Identities = 279/298 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2871361 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2871420
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2871421 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2871480
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 2871481 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 2871540
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 2871541 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagcttgc 2871600
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| |||||||||||||| || ||||||||||||||| | ||||||
Sbjct: 2871601 caagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctccgcttaggct 2871658
Score = 434 bits (219), Expect = e-119
Identities = 279/299 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2685969 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2686028
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2686029 ggttcaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2686088
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 2686089 tgacatcttcgagaagctcgccggagagtccgccaagctcgcccgctacaacaagaagcc 2686148
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2686149 caccatcacctcccgggagatccagacctccgtccgcctcgtcctccccggcgagctcgc 2686208
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
|||||||||||||||||||||||||||||||||||| || ||||||||| | |||||||
Sbjct: 2686209 caagcacgccgtctctgagggcaccaaggccgtcactaaattcacctccgcttaggctt 2686267
Score = 432 bits (218), Expect = e-118
Identities = 278/298 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2837340 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2837281
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2837280 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2837221
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|| |||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 2837220 tgatatcttcgagaagctcgccggagagtccgccaagctcgcgcgctacaacaagaagcc 2837161
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||||||
Sbjct: 2837160 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagctcgc 2837101
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 2837100 caagcacgccgtctccgagggcaccaaggccgttaccaagttcacttcctcctaggct 2837043
Score = 430 bits (217), Expect = e-118
Identities = 271/289 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2819529 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2819470
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2819469 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2819410
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 2819409 cgacatcttcgagaagctcgccggggagtccgccaagctcgcgcgctacaacaagaagcc 2819350
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| || || ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2819349 caccatcacctcacgggagatccagacctccgtccgcctcgtcctccccggcgagctcgc 2819290
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcc 531
||||||||||||||| |||||||||||||| || |||||||||||||||
Sbjct: 2819289 caagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctcc 2819241
Score = 424 bits (214), Expect = e-116
Identities = 265/282 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 2843953 gaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 2843894
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2843893 ggttcaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 2843834
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 2843833 cgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagcc 2843774
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| ||||| ||||||||||| |||||||| |||||||||||||||||
Sbjct: 2843773 caccatcacctcccgggagattcagacctccgtccgcctcgtcctccccggcgagctcgc 2843714
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagtt 524
||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 2843713 caagcacgccgtctccgagggcacgaaggccgtcaccaagtt 2843672
Score = 361 bits (182), Expect = 4e-097
Identities = 236/254 (92%)
Strand = Plus / Minus
Query: 275 agatctacatcttcaaggtgctgaagcaggtgcacccggacatcggcatctcctccaagg 334
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 17421987 agatctacatcttcaaggtcctgaagcaggtgcacccggacatcggcatctcctccaagg 17421928
Query: 335 ccatgtccatcatgaactccttcatcaacgacatcttcgagaagctggccggcgaggccg 394
||||||| |||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 17421927 ccatgtcgatcatgaactccttcatcaacgacatcttcgagaagctcgcgcaggaggccg 17421868
Query: 395 ccaagctcgcgcgctacaacaagaagcccaccatcacgtcccgcgagatccagacctccg 454
|| | ||||| ||||||||||||||||||| | ||| |||||||||||| |||||||||
Sbjct: 17421867 cccacctcgcccgctacaacaagaagcccatcgccacctcccgcgagatctagacctccg 17421808
Query: 455 tgcgcctcgtgctccccggcgagctcgccaagcacgccgtctctgagggcaccaaggccg 514
| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 17421807 tccgcctcgtcctccccggcgagctcgccaagcacgccgtctccgagggcaccaaggccg 17421748
Query: 515 tcaccaagttcacc 528
||||||||||||||
Sbjct: 17421747 tcaccaagttcacc 17421734
Score = 339 bits (171), Expect = 1e-090
Identities = 258/287 (89%)
Strand = Plus / Minus
Query: 241 aagaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaag 300
|||||||||| |||||||||||| || || || ||||||||||| |||||||| || |||
Sbjct: 36007728 aagaagaaggccaagaagagcgtcgaaacttataagatctacattttcaaggtcctcaag 36007669
Query: 301 caggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatc 360
|||||||| || || ||||| || || |||||||||||||| ||||||||||| ||||||
Sbjct: 36007668 caggtgcatcccgatatcgggatatcgtccaaggccatgtcgatcatgaactcgttcatc 36007609
Query: 361 aacgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaag 420
||||| |||||||||||||| ||| ||||||||| ||||| |||||||||||||||
Sbjct: 36007608 aacgatatcttcgagaagctcgcccaggaggccgcccgtctcgcccgctacaacaagaag 36007549
Query: 421 cccaccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctc 480
|| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 36007548 ccgaccatcacctcccgcgagatccagacctcggtgcgcctcgtcctccccggcgagctc 36007489
Query: 481 gccaagcacgccgtctctgagggcaccaaggccgtcaccaagttcac 527
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36007488 gccaagcacgccgtctctgagggcaccaaggccgtcaccaagttcac 36007442
Score = 113 bits (57), Expect = 2e-022
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 2837507 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 2837448
Query: 145 gcggagaag 153
|||||||||
Sbjct: 2837447 gcggagaag 2837439
Score = 113 bits (57), Expect = 2e-022
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 2819696 atggcgcccaaggcggagaagaagccggcggcgaagaagcccgcggaggaggagcccgcg 2819637
Query: 145 gcggagaag 153
|||||||||
Sbjct: 2819636 gcggagaag 2819628
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 2871188 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 2871247
Query: 145 gcggagaag 153
|||||||||
Sbjct: 2871248 gcggagaag 2871256
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 2857059 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 2857000
Query: 145 gcggagaag 153
|||||||||
Sbjct: 2856999 gcggagaag 2856991
Score = 105 bits (53), Expect = 4e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 2673479 atggcgcccaaggcagagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 2673538
Query: 145 gcg---------gagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 2673539 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 2673598
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 2673599 gccggcaag 2673607
Score = 97.6 bits (49), Expect = 1e-017
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgc- 143
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 2844120 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 2844061
Query: 144 --------ggcggagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 2844060 gcagagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 2844001
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 2844000 gccggcaag 2843992
Score = 97.6 bits (49), Expect = 1e-017
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 2685802 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgca 2685861
Query: 145 gcg---------gagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 2685862 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 2685921
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 2685922 gccggcaag 2685930
Score = 83.8 bits (42), Expect = 1e-013
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 82 ccgatggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggag 135
||||||||||||||||| |||||||||||||||| ||||||||||| |||||||
Sbjct: 36007854 ccgatggcgcccaaggcggagaagaagcccgcggagaagaagccggtggaggag 36007801
Score = 73.8 bits (37), Expect = 1e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 160 gccgggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 2871272 gccgggaagaagcccaaggcggagaagcggctccccgccggcaag 2871316
Score = 65.9 bits (33), Expect = 3e-008
Identities = 45/49 (91%)
Strand = Plus / Minus
Query: 332 aggccatgtccatcatgaactccttcatcaacgacatcttcgagaagct 380
|||||||||| |||||||| ||||||||||||||| | |||||||||||
Sbjct: 30942175 aggccatgtctatcatgaaatccttcatcaacgacgttttcgagaagct 30942127
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 2856972 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 2856931
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 2837420 gggaagaagcccaaggcggagaagcgcctccccgccggcaag 2837379
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 2819609 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 2819568
Score = 56.0 bits (28), Expect = 3e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 82 ccgatggcgcccaaggccgagaagaagcccgcggcgaagaagcc 125
||||||||||||||||| ||||||||||| | || |||||||||
Sbjct: 17422126 ccgatggcgcccaaggcagagaagaagccggtggagaagaagcc 17422083
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 270 gtacaagatctacatcttcaaggtgctgaagca 302
|||||||||| ||||||||||||||| ||||||
Sbjct: 30476487 gtacaagatcaacatcttcaaggtgcagaagca 30476519
Score = 50.1 bits (25), Expect = 0.002
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 165 gaagaagcccaaggcggagaagcgg 189
|||||||||||||||||||||||||
Sbjct: 17422091 gaagaagcccaaggcggagaagcgg 17422067
Score = 44.1 bits (22), Expect = 0.12
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 258 gagcgtggagacgtacaagatctacatctt 287
||||||||| | ||||||||||||||||||
Sbjct: 19885852 gagcgtggaaatgtacaagatctacatctt 19885823
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 271 tacaagatctacatcttcaaggtgct 296
||||||||||| ||||||||||||||
Sbjct: 12269778 tacaagatctatatcttcaaggtgct 12269803
Score = 42.1 bits (21), Expect = 0.49
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 165 gaagaagcccaaggcggagaagcgg 189
||||||||||||||| |||||||||
Sbjct: 36007792 gaagaagcccaaggccgagaagcgg 36007768
Score = 42.1 bits (21), Expect = 0.49
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 349 aactccttcatcaacgacatcttcgagaa 377
||||| |||||||||||||||||| ||||
Sbjct: 80287 aactcattcatcaacgacatcttcaagaa 80259
>gb|CF291163.1|CF291163 14ROOT--01-H18.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-H18, mRNA sequence
Length = 532
Score = 442 bits (223), Expect = e-121
Identities = 274/291 (94%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 242 gaagaaggggaagaagagcgtcgagacttacaagatctacatcttcaaggtgctcaagca 301
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 361
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 362 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 421
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||| ||
Sbjct: 422 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttgc 481
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctc 533
||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 482 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacttcctc 532
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 75 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 134
Query: 145 gcggagaag 153
|||||||||
Sbjct: 135 gcggagaag 143
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 162 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 203
>gb|CF292148.1|CF292148 14ROOT--02-N19.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-N19, mRNA sequence
Length = 549
Score = 442 bits (223), Expect = e-121
Identities = 274/291 (94%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 259 gaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 318
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 378
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 379 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 438
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||| ||
Sbjct: 439 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttgc 498
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctc 533
||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 499 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacttcctc 549
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 92 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 151
Query: 145 gcggagaag 153
|||||||||
Sbjct: 152 gcggagaag 160
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 179 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 220
>gb|CV730234.1|CV730234 FLO--03-K21.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--03-K21,
mRNA sequence
Length = 531
Score = 442 bits (223), Expect = e-121
Identities = 280/299 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 198 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 257
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ggtccaccccgatatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 317
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 318 cgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagcc 377
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 378 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 437
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
||||||||||||||| ||||||||||||||||||||||| ||||||||| | |||||||
Sbjct: 438 caagcacgccgtctccgagggcaccaaggccgtcaccaaattcacctccgcttaggctt 496
Score = 87.7 bits (44), Expect = 9e-015
Identities = 100/120 (83%), Gaps = 9/120 (7%)
Strand = Plus / Plus
Query: 94 aaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcggcg------ 147
||||| ||||||||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 40 aaggcagagaagaagccggccgcgaagaagcccgcggaggaggagcccgcggcggagaag 99
Query: 148 ---gagaagacgaccgccgggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||| | |||| |||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 100 gccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctccccgccggcaag 159
>dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0434B04
Length = 167029
Score = 442 bits (223), Expect = e-121
Identities = 280/299 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 123421 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 123480
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123481 ggtccaccccgatatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 123540
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 123541 cgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagcc 123600
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 123601 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 123660
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
||||||||||||||| ||||||||||||||||||||||| ||||||||| | |||||||
Sbjct: 123661 caagcacgccgtctccgagggcaccaaggccgtcaccaaattcacctccgcttaggctt 123719
Score = 434 bits (219), Expect = e-119
Identities = 279/299 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 135744 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 135803
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135804 ggttcaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 135863
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 135864 tgacatcttcgagaagctcgccggagagtccgccaagctcgcccgctacaacaagaagcc 135923
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 135924 caccatcacctcccgggagatccagacctccgtccgcctcgtcctccccggcgagctcgc 135983
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
|||||||||||||||||||||||||||||||||||| || ||||||||| | |||||||
Sbjct: 135984 caagcacgccgtctctgagggcaccaaggccgtcactaaattcacctccgcttaggctt 136042
Score = 105 bits (53), Expect = 4e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 123254 atggcgcccaaggcagagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 123313
Query: 145 gcg---------gagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 123314 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 123373
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 123374 gccggcaag 123382
Score = 97.6 bits (49), Expect = 1e-017
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 135577 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgca 135636
Query: 145 gcg---------gagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 135637 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 135696
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 135697 gccggcaag 135705
>gb|AACV01000194.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000194, whole
genome shotgun sequence
Length = 30874
Score = 442 bits (223), Expect = e-121
Identities = 280/299 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 19043 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 19102
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19103 ggtccaccccgatatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 19162
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 19163 cgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagcc 19222
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 19223 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 19282
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
||||||||||||||| ||||||||||||||||||||||| ||||||||| | |||||||
Sbjct: 19283 caagcacgccgtctccgagggcaccaaggccgtcaccaaattcacctccgcttaggctt 19341
Score = 105 bits (53), Expect = 4e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 18876 atggcgcccaaggcagagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 18935
Query: 145 gcg---------gagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 18936 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 18995
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 18996 gccggcaag 19004
>ref|NM_184407.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 462
Score = 442 bits (223), Expect = e-121
Identities = 274/291 (94%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 168 gaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 227
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 287
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 288 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 347
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||| ||
Sbjct: 348 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttgc 407
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctc 533
||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 408 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacttcctc 458
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 1 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 60
Query: 145 gcggagaag 153
|||||||||
Sbjct: 61 gcggagaag 69
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 88 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 129
>gb|CA998848.1|CA998848 S345M_G12 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 564
Score = 440 bits (222), Expect = e-121
Identities = 279/298 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 55 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 114
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 174
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 175 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 234
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 235 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagcttgc 294
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| |||||||||||||| || ||||||||||||||| | ||||||
Sbjct: 295 caagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctccgcttaggct 352
>gb|CF292040.1|CF292040 14ROOT--02-L10.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-L10, mRNA sequence
Length = 624
Score = 440 bits (222), Expect = e-121
Identities = 279/298 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 242 gaagaaggggaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 301
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 361
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 362 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 421
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| ||| |||||||| |||| |||||||| |||||||||||||| ||
Sbjct: 422 caccatcacctcccgggaggtccagaccgccgtccgcctcgtcctccccggcgagcttgc 481
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 482 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacttcctcttaggct 539
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 75 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 134
Query: 145 gcggagaag 153
|||||||||
Sbjct: 135 gcggagaag 143
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 162 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 203
>gb|BP184585.1|BP184585 BP184585 pNS rice panicle cDNA, flowering stage Oryza sativa
(japonica cultivar-group) cDNA clone 13YPG059, mRNA
sequence
Length = 626
Score = 440 bits (222), Expect = e-121
Identities = 279/298 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 237 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 296
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 356
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 357 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 416
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 417 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagcttgc 476
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| |||||||||||||| || ||||||||||||||| | ||||||
Sbjct: 477 caagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctccgcttaggct 534
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 64 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 123
Query: 145 gcggagaag 153
|||||||||
Sbjct: 124 gcggagaag 132
Score = 73.8 bits (37), Expect = 1e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 160 gccgggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 148 gccgggaagaagcccaaggcggagaagcggctccccgccggcaag 192
>gb|BP184926.1|BP184926 BP184926 pNS rice callus cDNA Oryza sativa (japonica
cultivar-group) cDNA clone 23C4AG024, mRNA sequence
Length = 663
Score = 440 bits (222), Expect = e-121
Identities = 279/298 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 249 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 308
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 368
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 369 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 428
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 429 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagcttgc 488
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| |||||||||||||| || ||||||||||||||| | ||||||
Sbjct: 489 caagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctccgcttaggct 546
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 76 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 135
Query: 145 gcggagaag 153
|||||||||
Sbjct: 136 gcggagaag 144
Score = 73.8 bits (37), Expect = 1e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 160 gccgggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 160 gccgggaagaagcccaaggcggagaagcggctccccgccggcaag 204
>gb|AU031294.1|AU031294 AU031294 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E61302_2Z, mRNA sequence
Length = 618
Score = 438 bits (221), Expect = e-120
Identities = 283/301 (94%), Gaps = 2/301 (0%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtg-ctgaagc 301
||||||||| ||||||||| ||||||| ||||||||||||||||||||||| || ||||
Sbjct: 125 gaagaaggggaagaagagcttggagacctacaagatctacatcttcaaggtttctcaagc 184
Query: 302 aggtgcacccggacatcggcatctcctcc-aaggccatgtccatcatgaactccttcatc 360
|||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 185 aggtccaccccgacatcggcatctcctcccaaggccatgtccatcatgaactccttcatc 244
Query: 361 aacgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaag 420
|||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||
Sbjct: 245 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 304
Query: 421 cccaccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctc 480
||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 305 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctc 364
Query: 481 gccaagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 365 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggct 424
Query: 541 t 541
|
Sbjct: 425 t 425
>gb|AU070936.1|AU070936 AU070936 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10485_1A, mRNA sequence
Length = 712
Score = 438 bits (221), Expect = e-120
Identities = 272/289 (94%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 240 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 299
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 359
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 360 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 419
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 420 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagcttgc 479
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcc 531
||||||||||||||| |||||||||||||| || |||||||||||||||
Sbjct: 480 caagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctcc 528
Score = 95.6 bits (48), Expect = 4e-017
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 66 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 125
Query: 145 gcgg 148
||||
Sbjct: 126 gcgg 129
Score = 73.8 bits (37), Expect = 1e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 160 gccgggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 151 gccgggaagaagcccaaggcggagaagcggctccccgccggcaag 195
>ref|NM_184371.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 462
Score = 438 bits (221), Expect = e-120
Identities = 272/289 (94%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 168 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 227
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 ggtccaccccgatatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 287
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 288 cgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagcc 347
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 348 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 407
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcc 531
||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 408 caagcacgccgtctccgagggcaccaaggccgtcaccaaattcacctcc 456
Score = 105 bits (53), Expect = 4e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 1 atggcgcccaaggcagagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 60
Query: 145 gcg---------gagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 61 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 120
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 121 gccggcaag 129
>ref|NM_184409.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 468
Score = 438 bits (221), Expect = e-120
Identities = 272/289 (94%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 174 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 233
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 293
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 294 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 353
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||
Sbjct: 354 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagcttgc 413
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcc 531
||||||||||||||| |||||||||||||| || |||||||||||||||
Sbjct: 414 caagcacgccgtctccgagggcaccaaggctgtgaccaagttcacctcc 462
Score = 105 bits (53), Expect = 4e-020
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||
Sbjct: 1 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgcg 60
Query: 145 gcggagaag 153
|||||||||
Sbjct: 61 gcggagaag 69
Score = 73.8 bits (37), Expect = 1e-010
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 160 gccgggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 85 gccgggaagaagcccaaggcggagaagcggctccccgccggcaag 129
>gb|AU031069.1|AU031069 AU031069 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60725_2Z, mRNA sequence
Length = 441
Score = 436 bits (220), Expect = e-120
Identities = 278/298 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
||||||||| ||||||||| | ||||| |||||||||||||||| ||||||||| |||||
Sbjct: 28 gaagaaggggaagaagagcntcgagacctacaagatctacatctncaaggtgctcaagca 87
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 147
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||
Sbjct: 148 cgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaagcc 207
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||| ||
Sbjct: 208 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagcttgc 267
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 268 caagcacgccgtctccgagggcaccaaggccgtcaccaagttcacttcctcttaggct 325
>gb|CB670862.1|CB670862 OSJNEe04C16.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04C16 5', mRNA sequence
Length = 700
Score = 434 bits (219), Expect = e-119
Identities = 279/299 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 228 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 287
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ggttcaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 347
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 348 tgacatcttcgagaagctcgccggagagtccgccaagctcgcccgctacaacaagaagcc 407
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 408 caccatcacctcccgggagatccagacctccgtccgcctcgtcctccccggcgagctcgc 467
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
|||||||||||||||||||||||||||||||||||| || ||||||||| | |||||||
Sbjct: 468 caagcacgccgtctctgagggcaccaaggccgtcactaaattcacctccgcttaggctt 526
Score = 97.6 bits (49), Expect = 1e-017
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 61 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgca 120
Query: 145 gcg---------gagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 121 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 180
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 181 gccggcaag 189
>gb|CV730588.1|CV730588 FLO--04-D06.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--04-D06,
mRNA sequence
Length = 492
Score = 434 bits (219), Expect = e-119
Identities = 279/299 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||| ||||||||||||||||| |||||
Sbjct: 411 gaagaaggcgaagaagagcgtcgagacctacaagatttacatcttcaaggtgctcaagca 352
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ggtccaccccgatatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 292
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 291 cgacatcttcgagaagctcgccggggagtccgccaagctcgcccgctacaacaagaagcc 232
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 231 caccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctcgc 172
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
||||||||||||||| ||||||||||||||||||||||| ||||||||| | |||||||
Sbjct: 171 caagcacgccgtctccgagggcaccaaggccgtcaccaaattcacctccgcttaggctt 113
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 163 gggaagaagcccaaggcggagaagcggatccccgctggcaag 204
|||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 491 gggaagaagcccaaggcggagaagcgtctccccgccggcaag 450
>gb|AACV01000195.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000195, whole
genome shotgun sequence
Length = 6165
Score = 434 bits (219), Expect = e-119
Identities = 279/299 (93%)
Strand = Plus / Minus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 5588 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 5529
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5528 ggttcaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 5469
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
||||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||
Sbjct: 5468 tgacatcttcgagaagctcgccggagagtccgccaagctcgcccgctacaacaagaagcc 5409
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 5408 caccatcacctcccgggagatccagacctccgtccgcctcgtcctccccggcgagctcgc 5349
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggctt 541
|||||||||||||||||||||||||||||||||||| || ||||||||| | |||||||
Sbjct: 5348 caagcacgccgtctctgagggcaccaaggccgtcactaaattcacctccgcttaggctt 5290
Score = 97.6 bits (49), Expect = 1e-017
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 85 atggcgcccaaggccgagaagaagcccgcggcgaagaagccggcggaggaggagcccgcg 144
|||||||||||||| ||||||||||| || ||||||||||| |||||||||||||||||
Sbjct: 5755 atggcgcccaaggcggagaagaagccggccgcgaagaagcccgcggaggaggagcccgca 5696
Query: 145 gcg---------gagaagacgaccgccgggaagaagcccaaggcggagaagcggatcccc 195
||| |||||| | |||| |||||||||||||||||||||||||| |||||
Sbjct: 5695 gcggagaaggccgagaaggcccccgcggggaagaagcccaaggcggagaagcgtctcccc 5636
Query: 196 gctggcaag 204
|| ||||||
Sbjct: 5635 gccggcaag 5627
>gb|AU031202.1|AU031202 AU031202 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E61140_2Z, mRNA sequence
Length = 512
Score = 432 bits (218), Expect = e-118
Identities = 282/301 (93%), Gaps = 2/301 (0%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatct-acatcttcaaggtgctgaagc 301
||||||||| ||||||||||||||||| |||||||||| ||||||||||||| || ||||
Sbjct: 21 gaagaaggggaagaagagcgtggagacctacaagatcttacatcttcaaggttctcaagc 80
Query: 302 aggtgcacccggacatcggcatctcctccaaggccatgtcc-atcatgaactccttcatc 360
||| ||||| |||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 81 nggtccaccccgacatcggcatctcctccaaggccatgtcccattatgaactccttcatc 140
Query: 361 aacgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaag 420
|||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||
Sbjct: 141 aacgacatcttcgagaagctcgccgccgaggccgccaagctcgcccgctacaacaagaag 200
Query: 421 cccaccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctc 480
||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 201 cccaccatcacctcccgcgagatccagacctccgtccgcctcgtcctccccggcgagctc 260
Query: 481 gccaagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 261 gccaagcacgccgtctccgagggcaccaaggccgtcaccaagttcacctccgcttaggct 320
Query: 541 t 541
|
Sbjct: 321 t 321
>gb|AU092503.1|AU092503 AU092503 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C51480, mRNA sequence
Length = 539
Score = 432 bits (218), Expect = e-118
Identities = 278/298 (93%)
Strand = Plus / Plus
Query: 243 gaagaagggcaagaagagcgtggagacgtacaagatctacatcttcaaggtgctgaagca 302
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct: 29 gaagaaggcgaagaagagcgtcgagacctacaagatctacatcttcaaggtgctcaagca 88
Query: 303 ggtgcacccggacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 362
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 ggtccaccccgacatcggcatctcctccaaggccatgtccatcatgaactccttcatcaa 148
Query: 363 cgacatcttcgagaagctggccggcgaggccgccaagctcgcgcgctacaacaagaagcc 422
|| |||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 149 tgatatcttcgagaagctcgccggagagtccgccaagctcgcgcgctacaacaagaagcc 208
Query: 423 caccatcacgtcccgcgagatccagacctccgtgcgcctcgtgctccccggcgagctcgc 482
||||||||| ||||| |||||||||||| |||| |||||||| |||||||||||||||||
Sbjct: 209 caccatcacctcccgggagatccagaccgccgtccgcctcgtcctccccggcgagctcgc 268
Query: 483 caagcacgccgtctctgagggcaccaaggccgtcaccaagttcacctcctcctaggct 540
||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 269 caagcacgccgtctccgagggcaccaaggccgttaccaagttcacttcctcctaggct 326
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,552,544
Number of Sequences: 438736
Number of extensions: 1552544
Number of successful extensions: 22428
Number of sequences better than 0.5: 669
Number of HSP's better than 0.5 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 13390
Number of HSP's gapped (non-prelim): 8701
length of query: 857
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 836
effective length of database: 2,791,206,460
effective search space: 2333448600560
effective search space used: 2333448600560
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)