BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.249
(684 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU070938.1|AU070938 AU070938 Rice cDNA from young root O... 396 e-108
gb|CF282010.1|CF282010 14ETL--09-F05.g1 Rice etiolated leaf... 396 e-108
gb|CF326470.1|CF326470 JMT1--06-C11.g1 AtJMT-overexpressing... 396 e-108
dbj|AK120840.1| Oryza sativa (japonica cultivar-group) cDNA... 396 e-108
ref|NM_189457.1| Oryza sativa (japonica cultivar-group), p... 394 e-107
gb|AU085750.1|AU085750 AU085750 Rice callus Oryza sativa (j... 389 e-105
gb|AU164215.1|AU164215 AU164215 Rice panicle (longer than 1... 389 e-105
gb|CF196126.1|CF196126 Azvi1.1_E10 AZ-VI Oryza sativa (japo... 377 e-102
gb|CF278981.1|CF278981 14ETL--05-B23.b1 Rice etiolated leaf... 375 e-101
gb|CV721462.1|CV721462 YBH--04-D09.b1 Rice before heading y... 347 5e-093
gb|CF311012.1|CF311012 ABF--06-B02.g1 ABF3-overexpressing t... 331 3e-088
gb|AU095591.1|AU095591 AU095591 Rice cDNA from young root O... 315 2e-083
gb|CF282009.1|CF282009 14ETL--09-F05.b1 Rice etiolated leaf... 303 7e-080
gb|CF278982.1|CF278982 14ETL--05-B23.g1 Rice etiolated leaf... 291 2e-076
gb|CV727770.1|CV727770 14Salt--06-B09.b1 Salt treated rice ... 272 2e-070
gb|CV721047.1|CV721047 YBH--02-L09.b1 Rice before heading y... 270 9e-070
gb|AU166181.1|AU166181 AU166181 Rice immature leaf includin... 242 2e-061
gb|CV721497.1|CV721497 YBH--04-F04.b1 Rice before heading y... 242 2e-061
gb|AACV01003113.1| Oryza sativa (japonica cultivar-group) c... 228 3e-057
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 228 3e-057
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 228 3e-057
dbj|AP003277.2| Oryza sativa (japonica cultivar-group) geno... 228 3e-057
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 228 3e-057
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 228 3e-057
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 228 3e-057
gb|AU088658.1|AU088658 AU088658 Rice green shoot Oryza sati... 226 1e-056
gb|AU092662.1|AU092662 AU092662 Rice callus Oryza sativa (j... 226 1e-056
gb|CF295047.1|CF295047 30DGS--04-M23.b1 Rice leaf plasmid c... 226 1e-056
gb|CF323964.1|CF323964 HDN--05-D24.g1 OsHDAC1-overexpressin... 226 1e-056
gb|CF325902.1|CF325902 JMT1--04-I16.g1 AtJMT-overexpressing... 226 1e-056
dbj|AK064821.1| Oryza sativa (japonica cultivar-group) cDNA... 226 1e-056
gb|AU163849.1|AU163849 AU163849 Rice panicle at ripening st... 220 8e-055
gb|CF282412.1|CF282412 14ETL--09-O18.g1 Rice etiolated leaf... 218 3e-054
gb|CV722495.1|CV722495 YTPSP--01-I02.b1 TPSP-overexpression... 214 5e-053
gb|CF305853.1|CF305853 HDA1--01-O21.g1 OsHDAC1-overexpressi... 210 7e-052
gb|CF318817.1|CF318817 HD--09-B14.b1 OsHDAC1-overexpressing... 208 3e-051
gb|CF321374.1|CF321374 HD--12-J19.b1 OsHDAC1-overexpressing... 208 3e-051
gb|CF324621.1|CF324621 JMT1--01-A12.g1 AtJMT-overexpressing... 208 3e-051
gb|AU070878.1|AU070878 AU070878 Rice cDNA from young root O... 204 5e-050
gb|CA999252.1|CA999252 S234P_C07 Rice cold stress germinati... 202 2e-049
gb|CF324999.1|CF324999 JMT1--02-A18.g1 AtJMT-overexpressing... 194 4e-047
gb|CV725728.1|CV725728 14Salt--02-P08.g1 Salt treated rice ... 186 1e-044
gb|AU032790.1|AU032790 AU032790 Rice green shoot Oryza sati... 184 4e-044
gb|CF295048.1|CF295048 30DGS--04-M23.g1 Rice leaf plasmid c... 180 7e-043
gb|CF295639.1|CF295639 30DGS--05-K19.b1 Rice leaf plasmid c... 178 3e-042
gb|AU029994.1|AU029994 AU029994 Rice cDNA from immature lea... 174 4e-041
gb|CF311153.1|CF311153 ABF--06-E08.b1 ABF3-overexpressing t... 174 4e-041
gb|AU095577.1|AU095577 AU095577 Rice cDNA from young root O... 167 1e-038
gb|CV729037.1|CV729037 FLO--01-K18.g1 Rice flower lambda ph... 165 4e-038
gb|AU095902.1|AU095902 AU095902 Rice green shoot Oryza sati... 153 1e-034
gb|CF318978.1|CF318978 HD--09-F03.g1 OsHDAC1-overexpressing... 153 1e-034
gb|CF327804.1|CF327804 NACL--02-H02.b1 Rice callus plasmid ... 153 1e-034
gb|CF331817.1|CF331817 NACL--08-B10.g1 Rice callus plasmid ... 153 1e-034
gb|CV729036.1|CV729036 FLO--01-K18.b1 Rice flower lambda ph... 153 1e-034
gb|CF297391.1|CF297391 30DGS--08-D18.g1 Rice leaf plasmid c... 151 6e-034
gb|CV730074.1|CV730074 FLO--03-G23.b1 Rice flower lambda ph... 149 2e-033
gb|C99605.1|C99605 C99605 Rice panicle (longer than 10cm) O... 147 9e-033
gb|CA999251.1|CA999251 S234P_C06 Rice cold stress germinati... 147 9e-033
gb|CF279862.1|CF279862 14ETL--06-F04.b1 Rice etiolated leaf... 145 4e-032
gb|CF315806.1|CF315806 HD--04-N19.g1 OsHDAC1-overexpressing... 139 2e-030
gb|AU065333.1|AU065333 AU065333 Rice cDNA from immature lea... 137 9e-030
gb|C19903.1|C19903 C19903 Rice panicle at ripening stage Or... 131 5e-028
gb|CF321375.1|CF321375 HD--12-J19.g1 OsHDAC1-overexpressing... 131 5e-028
gb|D46673.1|D46673 RICS11485A Rice green shoot Oryza sativa... 127 8e-027
gb|CF317599.1|CF317599 HD--07-F17.b1 OsHDAC1-overexpressing... 127 8e-027
gb|CF327805.1|CF327805 NACL--02-H02.g1 Rice callus plasmid ... 127 8e-027
gb|D48014.1|D48014 RICS13924A Rice green shoot Oryza sativa... 123 1e-025
gb|D15917.1|D15917 RICC1525A Rice callus Oryza sativa (japo... 123 1e-025
gb|CF295459.1|CF295459 30DGS--05-G19.g1 Rice leaf plasmid c... 123 1e-025
gb|C20362.1|C20362 C20362 Rice panicle at ripening stage Or... 121 5e-025
gb|AU092805.1|AU092805 AU092805 Rice callus Oryza sativa (j... 121 5e-025
gb|AU094584.1|AU094584 AU094584 Rice panicle at ripening st... 121 5e-025
gb|CF295640.1|CF295640 30DGS--05-K19.g1 Rice leaf plasmid c... 121 5e-025
gb|CF318818.1|CF318818 HD--09-B14.g1 OsHDAC1-overexpressing... 121 5e-025
gb|CF318977.1|CF318977 HD--09-F03.b1 OsHDAC1-overexpressing... 121 5e-025
gb|CF331816.1|CF331816 NACL--08-B10.b1 Rice callus plasmid ... 121 5e-025
gb|CV730359.1|CV730359 FLO--03-N20.g1 Rice flower lambda ph... 121 5e-025
gb|AC129716.3| Oryza sativa (japonica cultivar-group) chrom... 121 5e-025
gb|AACV01010748.1| Oryza sativa (japonica cultivar-group) c... 121 5e-025
ref|NT_079870.2| Oryza sativa (japonica cultivar-group) 121 5e-025
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 121 5e-025
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 121 5e-025
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 121 5e-025
gb|C93424.1|C93424 C93424 Rice callus Oryza sativa (japonic... 119 2e-024
gb|CF337223.1|CF337223 JMT--07-J08.g1 AtJMT-overexpressing ... 119 2e-024
gb|CA999733.1|CA999733 S234I_E03 Rice cold stress germinati... 117 8e-024
gb|C27590.1|C27590 C27590 Rice callus cDNA Oryza sativa (ja... 115 3e-023
gb|C27755.1|C27755 C27755 Rice callus cDNA Oryza sativa (ja... 111 5e-022
gb|C28027.1|C28027 C28027 Rice callus cDNA Oryza sativa (ja... 111 5e-022
gb|AU223144.1|AU223144 AU223144 Rice shoot Oryza sativa (ja... 111 5e-022
gb|CA755402.1|CA755402 BR030019000_PLATE_H09_72_079.ab1 OA ... 111 5e-022
gb|CF337061.1|CF337061 JMT--07-F17.g1 AtJMT-overexpressing ... 111 5e-022
gb|AU181087.1|AU181087 AU181087 Rice green shoot Oryza sati... 109 2e-021
gb|D46641.1|D46641 RICS11434A Rice green shoot Oryza sativa... 103 1e-019
gb|CF295458.1|CF295458 30DGS--05-G19.b1 Rice leaf plasmid c... 103 1e-019
gb|AU164945.1|AU164945 AU164945 Rice cDNA from immature lea... 98 8e-018
gb|CF317768.1|CF317768 HD--07-J08.b1 OsHDAC1-overexpressing... 98 8e-018
gb|AU032791.1|AU032791 AU032791 Rice green shoot Oryza sati... 96 3e-017
gb|CF282411.1|CF282411 14ETL--09-O18.b1 Rice etiolated leaf... 96 3e-017
gb|AU066098.1|AU066098 AU066098 Rice shoot Oryza sativa (ja... 88 7e-015
gb|CA999387.1|CA999387 S234G_H11 Rice cold stress germinati... 84 1e-013
gb|AU181088.1|AU181088 AU181088 Rice green shoot Oryza sati... 76 3e-011
gb|AU097310.1|AU097310 AU097310 Rice shoot Oryza sativa (ja... 68 7e-009
gb|AU092045.1|AU092045 AU092045 Rice callus Oryza sativa (j... 66 3e-008
gb|CV723273.1|CV723273 root--03-A19.g1 Rice root lambda pha... 56 3e-005
gb|AU031260.1|AU031260 AU031260 Rice cDNA from immature lea... 50 0.002
gb|CF315935.1|CF315935 HD--05-A16.b1 OsHDAC1-overexpressing... 50 0.002
gb|CV722203.1|CV722203 YBH--06-N05.b1 Rice before heading y... 50 0.002
dbj|AK060133.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
dbj|AK073017.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
emb|AJ429043.1|OSA429043 Oryza sativa mRNA for cytochrome b... 50 0.002
gb|CF281572.1|CF281572 14ETL--08-K22.b1 Rice etiolated leaf... 44 0.098
dbj|AK066861.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.098
ref|XM_467062.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.098
gb|CB643558.1|CB643558 OSJNEb04F03.f OSJNEb Oryza sativa (j... 40 1.5
dbj|AK073441.1| Oryza sativa (japonica cultivar-group) cDNA... 40 1.5
dbj|AK120668.1| Oryza sativa (japonica cultivar-group) cDNA... 40 1.5
gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 ... 40 1.5
gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 ... 40 1.5
dbj|AP002897.2| Oryza sativa (japonica cultivar-group) geno... 40 1.5
gb|AACV01001836.1| Oryza sativa (japonica cultivar-group) c... 40 1.5
gb|AACV01002671.1| Oryza sativa (japonica cultivar-group) c... 40 1.5
gb|AACV01007938.1| Oryza sativa (japonica cultivar-group) c... 40 1.5
gb|AACV01008253.1| Oryza sativa (japonica cultivar-group) c... 40 1.5
gb|AACV01016256.1| Oryza sativa (japonica cultivar-group) c... 40 1.5
ref|XM_470402.1| Oryza sativa (japonica cultivar-group), mRNA 40 1.5
ref|NT_079858.2| Oryza sativa (japonica cultivar-group) 40 1.5
ref|NT_079914.2| Oryza sativa (japonica cultivar-group) 40 1.5
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 40 1.5
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 40 1.5
dbj|AP005190.3| Oryza sativa (japonica cultivar-group) geno... 40 1.5
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 40 1.5
dbj|AP004127.1| Oryza sativa (japonica cultivar-group) geno... 40 1.5
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 40 1.5
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 40 1.5
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 40 1.5
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 40 1.5
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 40 1.5
emb|AL607003.3|OSJN00130 Oryza sativa genomic DNA, chromoso... 40 1.5
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 40 1.5
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 40 1.5
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 40 1.5
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 40 1.5
gb|AU082688.1|AU082688 AU082688 Rice panicle shorter than 3... 38 6.0
gb|AU173000.1|AU173000 AU173000 Rice cDNA from immature lea... 38 6.0
gb|AU173850.1|AU173850 AU173850 Rice cDNA from young root O... 38 6.0
gb|CF276208.1|CF276208 14ETL--01-E09.b1 Rice etiolated leaf... 38 6.0
gb|CF278570.1|CF278570 14ETL--04-I11.b1 Rice etiolated leaf... 38 6.0
gb|CF281847.1|CF281847 14ETL--09-B11.b1 Rice etiolated leaf... 38 6.0
gb|CF290875.1|CF290875 14ROOT--01-B08.b1 Rice root plasmid ... 38 6.0
gb|CF291710.1|CF291710 14ROOT--02-D24.g1 Rice root plasmid ... 38 6.0
gb|CF292092.1|CF292092 14ROOT--02-M13.g1 Rice root plasmid ... 38 6.0
gb|CF314044.1|CF314044 HD--02-G18.g1 OsHDAC1-overexpressing... 38 6.0
gb|CV725241.1|CV725241 14Salt--02-D17.b1 Salt treated rice ... 38 6.0
gb|CV725528.1|CV725528 14Salt--02-K14.b1 Salt treated rice ... 38 6.0
gb|CV727338.1|CV727338 14Salt--05-H01.b1 Salt treated rice ... 38 6.0
gb|CV729919.1|CV729919 FLO--03-D08.b1 Rice flower lambda ph... 38 6.0
gb|CV732784.1|CV732784 FLO--07-G15.b1 Rice flower lambda ph... 38 6.0
gb|CV733513.1|CV733513 FLO--08-H10.g1 Rice flower lambda ph... 38 6.0
gb|D48242.2|D48242 RICS14363A Rice green shoot Oryza sativa... 38 6.0
gb|BP184955.1|BP184955 BP184955 pNS rice callus cDNA Oryza ... 38 6.0
gb|AF045571.1|AF045571 Oryza sativa nucleic acid binding pr... 38 6.0
gb|AF047428.1|AF047428 Oryza sativa nucleic acid binding pr... 38 6.0
emb|AL607093.1|OSJN01002 Oryza sativa (japonica cultivar-gr... 38 6.0
dbj|AP003895.1| Oryza sativa (japonica cultivar-group) chro... 38 6.0
dbj|AP003945.1| Oryza sativa (japonica cultivar-group) chro... 38 6.0
dbj|AP003954.1| Oryza sativa (japonica cultivar-group) chro... 38 6.0
gb|AC120530.3| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
dbj|AP005762.1| Oryza sativa (japonica cultivar-group) chro... 38 6.0
gb|AC105261.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
dbj|AK058535.1| Oryza sativa (japonica cultivar-group) cDNA... 38 6.0
dbj|AK067470.1| Oryza sativa (japonica cultivar-group) cDNA... 38 6.0
dbj|AK068855.1| Oryza sativa (japonica cultivar-group) cDNA... 38 6.0
dbj|AK071139.1| Oryza sativa (japonica cultivar-group) cDNA... 38 6.0
dbj|AK099004.1| Oryza sativa (japonica cultivar-group) cDNA... 38 6.0
dbj|AK099047.1| Oryza sativa (japonica cultivar-group) cDNA... 38 6.0
dbj|AK104108.1| Oryza sativa (japonica cultivar-group) cDNA... 38 6.0
dbj|AK104954.1| Oryza sativa (japonica cultivar-group) cDNA... 38 6.0
dbj|AK111204.1| Oryza sativa (japonica cultivar-group) cDNA... 38 6.0
dbj|AK120242.1| Oryza sativa (japonica cultivar-group) cDNA... 38 6.0
gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJN... 38 6.0
gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L2... 38 6.0
gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbar... 38 6.0
gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbar... 38 6.0
gb|AC118289.2| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
emb|AL713939.6|CNS07YPL Oryza sativa chromosome 12, . BAC O... 38 6.0
dbj|AP004674.2| Oryza sativa (japonica cultivar-group) geno... 38 6.0
dbj|AP004314.3| Oryza sativa (japonica cultivar-group) geno... 38 6.0
dbj|AP004269.4| Oryza sativa (japonica cultivar-group) geno... 38 6.0
dbj|AP004338.4| Oryza sativa (japonica cultivar-group) geno... 38 6.0
dbj|AP005824.4| Oryza sativa (japonica cultivar-group) geno... 38 6.0
ref|NT_107114.1| Oryza sativa (japonica cultivar-group) 38 6.0
ref|NT_107160.1| Oryza sativa (japonica cultivar-group) 38 6.0
ref|NT_107208.1| Oryza sativa (japonica cultivar-group) 38 6.0
ref|NT_107237.1| Oryza sativa (japonica cultivar-group) 38 6.0
dbj|AP003567.4| Oryza sativa (japonica cultivar-group) geno... 38 6.0
gb|AACV01000852.1| Oryza sativa (japonica cultivar-group) c... 38 6.0
gb|AACV01002135.1| Oryza sativa (japonica cultivar-group) c... 38 6.0
gb|AACV01002823.1| Oryza sativa (japonica cultivar-group) c... 38 6.0
gb|AACV01005136.1| Oryza sativa (japonica cultivar-group) c... 38 6.0
gb|AACV01006046.1| Oryza sativa (japonica cultivar-group) c... 38 6.0
gb|AACV01006949.1| Oryza sativa (japonica cultivar-group) c... 38 6.0
gb|AACV01009160.1| Oryza sativa (japonica cultivar-group) c... 38 6.0
gb|AACV01011747.1| Oryza sativa (japonica cultivar-group) c... 38 6.0
gb|AACV01011884.1| Oryza sativa (japonica cultivar-group) c... 38 6.0
gb|AACV01012434.1| Oryza sativa (japonica cultivar-group) c... 38 6.0
gb|AACV01013622.1| Oryza sativa (japonica cultivar-group) c... 38 6.0
gb|AACV01015039.1| Oryza sativa (japonica cultivar-group) c... 38 6.0
gb|AACV01015135.1| Oryza sativa (japonica cultivar-group) c... 38 6.0
gb|AACV01015603.1| Oryza sativa (japonica cultivar-group) c... 38 6.0
gb|AACV01022162.1| Oryza sativa (japonica cultivar-group) c... 38 6.0
gb|AACV01024223.1| Oryza sativa (japonica cultivar-group) c... 38 6.0
gb|AACV01026386.1| Oryza sativa (japonica cultivar-group) C... 38 6.0
gb|AACV01030258.1| Oryza sativa (japonica cultivar-group) C... 38 6.0
gb|AACV01031609.1| Oryza sativa (japonica cultivar-group) C... 38 6.0
gb|AC136221.2| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|AC136224.2| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
dbj|AP006860.2| Oryza sativa (japonica cultivar-group) geno... 38 6.0
ref|NM_190195.1| Oryza sativa (japonica cultivar-group), p... 38 6.0
ref|NM_192118.1| Oryza sativa (japonica cultivar-group), p... 38 6.0
ref|NM_197875.1| Oryza sativa (japonica cultivar-group) hyp... 38 6.0
ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chr... 38 6.0
ref|XM_471597.1| Oryza sativa (japonica cultivar-group), p... 38 6.0
ref|XM_476555.1| Oryza sativa (japonica cultivar-group), mRNA 38 6.0
ref|XM_482230.1| Oryza sativa (japonica cultivar-group), mRNA 38 6.0
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 38 6.0
ref|NT_107189.1| Oryza sativa (japonica cultivar-group) 38 6.0
ref|NT_107195.1| Oryza sativa (japonica cultivar-group) 38 6.0
ref|NT_107206.1| Oryza sativa (japonica cultivar-group) 38 6.0
ref|NT_107214.1| Oryza sativa (japonica cultivar-group) 38 6.0
ref|NT_079921.2| Oryza sativa (japonica cultivar-group) 38 6.0
dbj|AP006060.3| Oryza sativa (japonica cultivar-group) geno... 38 6.0
ref|NT_036323.3| Oryza sativa (japonica cultivar-group) 38 6.0
dbj|AP003746.2| Oryza sativa (japonica cultivar-group) geno... 38 6.0
dbj|AP004137.3| Oryza sativa (japonica cultivar-group) geno... 38 6.0
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 38 6.0
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 38 6.0
dbj|AP003455.2| Oryza sativa (japonica cultivar-group) geno... 38 6.0
dbj|AP003431.2| Oryza sativa (japonica cultivar-group) geno... 38 6.0
dbj|AP003346.4| Oryza sativa (japonica cultivar-group) geno... 38 6.0
dbj|AP006856.2| Oryza sativa (japonica cultivar-group) geno... 38 6.0
gb|CH401492.1| Oryza sativa (japonica cultivar-group) scaff... 38 6.0
gb|CH401273.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|CH401221.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|CH401219.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|CH401218.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|CH401210.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|CH401205.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|CH401204.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
emb|AL731615.4|OSJN00256 Oryza sativa genomic DNA, chromoso... 38 6.0
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 38 6.0
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 38 6.0
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 38 6.0
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 38 6.0
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 38 6.0
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 38 6.0
gb|AC137924.3| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|AC146948.2| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|AC114983.6| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 38 6.0
>gb|AU070938.1|AU070938 AU070938 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10487_1A, mRNA sequence
Length = 713
Score = 396 bits (200), Expect = e-108
Identities = 341/388 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
|||| ||||| || ||||||||||| ||||||||||| || |||| |||| ||| || |
Sbjct: 599 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 540
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||| ||||||||||||||||||||||||| |||||| | ||||| |||||||||||||
Sbjct: 539 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 480
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| || ||||| |||||||||||||||||||||||||||||||||| ||| ||||| || |
Sbjct: 479 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 420
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || | ||||| |||||||| || || |||||| |||||||||||||||||||||| |
Sbjct: 419 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 360
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
| |||||||||||||||||||| ||||||| || |||||||| ||||||||||||||||
Sbjct: 359 cgtcggtagcatccttggcagtcgaagacaacaagacatcatcacctccagggtgatcct 300
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 299 ccaaaaacttggtcacattgtacaccttgccgccgatgatgagccagcaatcgtccttgg 240
Query: 534 tgttgtgcttggccacctcctcgagggt 561
|||||||||||| |||||||| |||||
Sbjct: 239 tgttgtgcttggagacctcctccagggt 212
>gb|CF282010.1|CF282010 14ETL--09-F05.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--09-F05, mRNA sequence
Length = 634
Score = 396 bits (200), Expect = e-108
Identities = 341/388 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
|||| ||||| || ||||||||||| ||||||||||| || |||| |||| ||| || |
Sbjct: 583 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 524
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||| ||||||||||||||||||||||||| |||||| | ||||| |||||||||||||
Sbjct: 523 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 464
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| || ||||| |||||||||||||||||||||||||||||||||| ||| ||||| || |
Sbjct: 463 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 404
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || | ||||| |||||||| || || |||||| |||||||||||||||||||||| |
Sbjct: 403 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 344
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
| |||||||||||||||||||| ||||||| || |||||||| ||||||||||||||||
Sbjct: 343 cgtcggtagcatccttggcagtcgaagacaacaagacatcatcacctccagggtgatcct 284
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 283 ccaaaaacttggtcacattgtacaccttgccgccgatgatgagccagcaatcgtccttgg 224
Query: 534 tgttgtgcttggccacctcctcgagggt 561
|||||||||||| |||||||| |||||
Sbjct: 223 tgttgtgcttggagacctcctccagggt 196
>gb|CF326470.1|CF326470 JMT1--06-C11.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--06-C11, mRNA sequence
Length = 596
Score = 396 bits (200), Expect = e-108
Identities = 341/388 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
|||| ||||| || ||||||||||| ||||||||||| || |||| |||| ||| || |
Sbjct: 595 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 536
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||| ||||||||||||||||||||||||| |||||| | ||||| |||||||||||||
Sbjct: 535 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 476
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| || ||||| |||||||||||||||||||||||||||||||||| ||| ||||| || |
Sbjct: 475 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 416
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || | ||||| |||||||| || || |||||| |||||||||||||||||||||| |
Sbjct: 415 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 356
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
| |||||||||||||||||||| ||||||| || |||||||| ||||||||||||||||
Sbjct: 355 cgtcggtagcatccttggcagtcgaagacaacaagacatcatcacctccagggtgatcct 296
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 295 ccaaaaacttggtcacattgtacaccttgccgccgatgatgagccagcaatcgtccttgg 236
Query: 534 tgttgtgcttggccacctcctcgagggt 561
|||||||||||| |||||||| |||||
Sbjct: 235 tgttgtgcttggagacctcctccagggt 208
>dbj|AK120840.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022G15, full
insert sequence
Length = 764
Score = 396 bits (200), Expect = e-108
Identities = 341/388 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
|||| ||||| || ||||||||||| ||||||||||| || |||| |||| ||| || |
Sbjct: 600 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 541
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||| ||||||||||||||||||||||||| |||||| | ||||| |||||||||||||
Sbjct: 540 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 481
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| || ||||| |||||||||||||||||||||||||||||||||| ||| ||||| || |
Sbjct: 480 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 421
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || | ||||| |||||||| || || |||||| |||||||||||||||||||||| |
Sbjct: 420 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 361
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
| |||||||||||||||||||| ||||||| || |||||||| ||||||||||||||||
Sbjct: 360 cgtcggtagcatccttggcagtcgaagacaacaagacatcatcacctccagggtgatcct 301
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 300 ccaaaaacttggtcacattgtacaccttgccgccgatgatgagccagcaatcgtccttgg 241
Query: 534 tgttgtgcttggccacctcctcgagggt 561
|||||||||||| |||||||| |||||
Sbjct: 240 tgttgtgcttggagacctcctccagggt 213
>ref|NM_189457.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 408
Score = 394 bits (199), Expect = e-107
Identities = 337/383 (87%)
Strand = Plus / Minus
Query: 179 gcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcgaggggg 238
||||| || ||||||||||| ||||||||||| || |||| |||| ||| || | |||
Sbjct: 404 gcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgccaaggga 345
Query: 239 accaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggc 298
||||||||||||||||||||||||| |||||| | ||||| |||||||||||||| ||
Sbjct: 344 accaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagtgtggt 285
Query: 299 tgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccact 358
||||| |||||||||||||||||||||||||||||||||| ||| ||||| || || ||
Sbjct: 284 tgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgccgaca 225
Query: 359 aagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcg 418
| ||||| |||||||| || || |||||| |||||||||||||||||||||| || |||
Sbjct: 224 taatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagtcgtcg 165
Query: 419 gtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccaga 478
||||||||||||||||| ||||||| || |||||||| ||||||||||||||||||| |
Sbjct: 164 gtagcatccttggcagtcgaagacaacaagacatcatcacctccagggtgatcctccaaa 105
Query: 479 aacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttg 538
|||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 104 aacttggtcacattgtacaccttgccgccgatgatgagccagcaatcgtccttggtgttg 45
Query: 539 tgcttggccacctcctcgagggt 561
||||||| |||||||| |||||
Sbjct: 44 tgcttggagacctcctccagggt 22
>gb|AU085750.1|AU085750 AU085750 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52309, mRNA sequence
Length = 695
Score = 389 bits (196), Expect = e-105
Identities = 340/388 (87%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
|||| ||||| || ||||||||||| ||||||||||| || |||| |||| ||| || |
Sbjct: 516 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 457
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||| ||||||||||||| ||||||||||| |||||| | ||||| |||||||||||||
Sbjct: 456 agggaaccaaaaactggaagatcttgatgatgaactctggtgtcttatcctggttgtagt 397
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| || ||||| |||||||||||||||||||||||||||||||||| ||| ||||| || |
Sbjct: 396 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 337
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || | ||||| |||||||| || || |||||| |||||||||||||||||||||| |
Sbjct: 336 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 277
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
| |||||||||||||||||||| ||||||| || |||||||| ||||||||||||||||
Sbjct: 276 cgtcggtagcatccttggcagtcgaagacaacaagacatcatcacctccagggtgatcct 217
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 216 ccaaaaacttggtcacattgtacaccttgccgccgatgatgagccagcaatcgtccttgg 157
Query: 534 tgttgtgcttggccacctcctcgagggt 561
|||||||||||| |||||||| |||||
Sbjct: 156 tgttgtgcttggagacctcctccagggt 129
>gb|AU164215.1|AU164215 AU164215 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20763, mRNA sequence
Length = 694
Score = 389 bits (196), Expect = e-105
Identities = 328/372 (88%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
|||| ||||| || ||||||||||| ||||||||||| || |||| |||| ||| || |
Sbjct: 524 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 465
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||| ||||||||||||||||||||||||| |||||| | ||||| |||||||||||||
Sbjct: 464 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 405
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| || ||||| |||||||||||||||||||||||||||||||||| ||| ||||| || |
Sbjct: 404 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 345
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || | ||||| |||||||| || || |||||| |||||||||||||||||||||| |
Sbjct: 344 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 285
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
| |||||||||||||||||||| ||||||| || |||||||| ||||||||||||||||
Sbjct: 284 cgtcggtagcatccttggcagtcgaagacaacaagacatcatcacctccagggtgatcct 225
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 224 ccaaaaacttggtcacattgtacaccttgccgccgatgatgagccagcaatcgtccttgg 165
Query: 534 tgttgtgcttgg 545
||||||||||||
Sbjct: 164 tgttgtgcttgg 153
>gb|CF196126.1|CF196126 Azvi1.1_E10 AZ-VI Oryza sativa (japonica cultivar-group) cDNA clone
AZ-VI1.1E10 5', mRNA sequence
Length = 596
Score = 377 bits (190), Expect = e-102
Identities = 326/373 (87%)
Strand = Plus / Minus
Query: 189 acttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaaaact 248
|||||||||| ||||||||||| |||| |||| ||| || | ||| ||||||||||
Sbjct: 577 acttggtgtagatccttacagcnnnagccaatcccaatatcgccaagggaaccaaaaact 518
Query: 249 ggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttggggg 308
||||||||||||||| ||||| | ||||| |||||||||||||| || ||||| ||||
Sbjct: 517 ggaggatcttgatgatgaactnnggtgtcttatcctggttgtagtgtggttgcttcgggg 458
Query: 309 gcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtactcgt 368
|||||||||||||||||||||||||||||| ||| ||||| || || || | ||||| |
Sbjct: 457 gcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgccgacataatactcat 398
Query: 369 ccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagcatcct 428
||||||| || || |||||| |||||||||||||||||||||| || |||||||||||||
Sbjct: 397 ccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagtcgtcggtagcatcct 338
Query: 429 tggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttggtca 488
||||||| ||||||| || |||||||| ||||||||||||||||||| |||||||||||
Sbjct: 337 tggcagtcgaagacaacaagacatcatcacctccagggtgatcctccaaaaacttggtca 278
Query: 489 cattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggcca 548
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |
Sbjct: 277 cattgtacaccttgccgccgatgatgagccagcaatcgtccttggtgttgtgcttggaga 218
Query: 549 cctcctcgagggt 561
||||||| |||||
Sbjct: 217 cctcctccagggt 205
>gb|CF278981.1|CF278981 14ETL--05-B23.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--05-B23, mRNA sequence
Length = 620
Score = 375 bits (189), Expect = e-101
Identities = 340/389 (87%), Gaps = 1/389 (0%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccaga-cccagtattgcg 232
|||| ||||| || ||||||||||| ||||||||||| || ||| | |||| ||| ||
Sbjct: 619 actaagcagactctgacttggtgtagatccttacagcaacagcccaatcccaatatcgcc 560
Query: 233 agggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtag 292
| ||| ||||||||||||||||||||||||| |||||| | ||||| ||||||||||||
Sbjct: 559 aagggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtag 500
Query: 293 tgcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctca 352
|| || ||||| |||||||||||||||||||||||||||||||||| ||| |||| ||
Sbjct: 499 tgtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgacaatgtcg 440
Query: 353 cccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaa 412
|| || | ||||| |||||||| || || |||||| ||||||||||||||||||||||
Sbjct: 439 ccgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaag 380
Query: 413 tcatcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcc 472
|| |||||||||||||||||||| ||||||| || |||||||| |||||||||||||||
Sbjct: 379 tcgtcggtagcatccttggcagtcgaagacaacaagacatcatcacctccagggtgatcc 320
Query: 473 tccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttg 532
|||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 319 tccaaaaacttggtcacattgtacaccttgccgccgatgatgagccagcaatcgtccttg 260
Query: 533 gtgttgtgcttggccacctcctcgagggt 561
||||||||||||| |||||||| |||||
Sbjct: 259 gtgttgtgcttggagacctcctccagggt 231
>gb|CV721462.1|CV721462 YBH--04-D09.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--04-D09, mRNA sequence
Length = 447
Score = 347 bits (175), Expect = 5e-093
Identities = 277/311 (89%)
Strand = Plus / Minus
Query: 251 aggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttggggggc 310
||||||||||||| |||||| | ||||| |||||||||||||| || ||||| ||||||
Sbjct: 447 aggatcttgatgatgaactctggtgtcttatcctggttgtagtgtggttgcttcgggggc 388
Query: 311 gtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtactcgtcc 370
|||||||||||||||||||||||||||| ||| ||||| || || || | ||||| |||
Sbjct: 387 gtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgccgacataatactcatcc 328
Query: 371 atcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagcatccttg 430
||||| || || |||||| |||||||||||||||||||||| || |||||||||||||||
Sbjct: 327 atcatcgcccgagcagtggtgctgtgccccacatcttcgaagtcgtcggtagcatccttg 268
Query: 431 gcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttggtcaca 490
||||| ||||||| || |||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 267 gcagtcgaagacaacaagacatcatcacctccagggtgatcctccaaaaacttggtcaca 208
Query: 491 ttgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacc 550
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||
Sbjct: 207 ttgtacaccttgccgccgatgatgagccagcaatcgtccttggtgttgtgcttggagacc 148
Query: 551 tcctcgagggt 561
||||| |||||
Sbjct: 147 tcctccagggt 137
>gb|CF311012.1|CF311012 ABF--06-B02.g1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--06-B02, mRNA sequence
Length = 525
Score = 331 bits (167), Expect = 3e-088
Identities = 296/339 (87%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
|||| ||||| || ||||||||||| ||||||||||| || |||| |||| ||| || |
Sbjct: 183 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 242
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||| ||||||||||||||||||||||||| |||||| | ||||| |||||||||||||
Sbjct: 243 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 302
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| || ||||| |||||||||||||||||||||||||||||||||| ||| ||||| || |
Sbjct: 303 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 362
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || | ||||| |||||||| || || |||||| ||||||||||||||||| |||| |
Sbjct: 363 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatctccgaagt 422
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
| |||||||||||||||||||| ||||||| || |||||||| ||||||||||||||||
Sbjct: 423 cgtcggtagcatccttggcagtcgaagacaacaagacatcatcacctccagggtgatcct 482
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatga 512
||| |||||||||||||||||||||||||||||||||||
Sbjct: 483 ccaaaaacttggtcacattgtacaccttgccgccgatga 521
>gb|AU095591.1|AU095591 AU095591 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10487, mRNA sequence
Length = 617
Score = 315 bits (159), Expect = 2e-083
Identities = 320/373 (85%), Gaps = 2/373 (0%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
|||| ||||| || ||||||||||| ||||||||||| || |||| |||| ||| || |
Sbjct: 437 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 378
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||| ||||||||||||||||||||||||| |||||| | ||||| |||||||||||||
Sbjct: 377 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 318
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| || ||||| |||||||||||||||||||||||||||||||||| ||| ||||| || |
Sbjct: 317 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 258
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || | ||||| |||||||| || || |||||| |||||||||||| ||||||||| |
Sbjct: 257 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccanatcttcgaagt 198
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
| |||||||||||||||| ||| ||||| | || |||||||| |||||||| ||||||
Sbjct: 197 cgtcggtagcatccttggnagtcgaaganaacaagacatcatcanctccagggggatcct 138
Query: 474 cc-agaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttg 532
|| | |||||||||||||||||| |||||||||||||||| ||||||||| | || ||||
Sbjct: 137 ccaaaaaacttggtcacattgtanaccttgccgccgatgatgagccagcaatngt-cttg 79
Query: 533 gtgttgtgcttgg 545
|||||||||||||
Sbjct: 78 gtgttgtgcttgg 66
>gb|CF282009.1|CF282009 14ETL--09-F05.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--09-F05, mRNA sequence
Length = 497
Score = 303 bits (153), Expect = 7e-080
Identities = 296/341 (86%), Gaps = 2/341 (0%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
|||| ||||| || ||||||||||| ||||||||||| || |||| |||| ||| || |
Sbjct: 155 actaagcagactctgacttggtgtaaatccttacagcaacagccaatcccaatatcgcca 214
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||| ||||||||||||||||||||||||| |||||| | ||||| |||||||||||||
Sbjct: 215 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 274
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| || ||||| |||||||||||||||||||||||||||||||||| ||| ||||| || |
Sbjct: 275 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 334
Query: 354 ccactaagtactcgtccatcattgcacgggcagt-gctgctgtgccccacatcttcgaaa 412
| || | ||||| |||||||| || || ||||| | ||||||||||||||||||| ||
Sbjct: 335 cgacataatactcatccatcatcgcccgagcagtgggtgctgtgccccacatcttcaaag 394
Query: 413 tcatcggtagcatccttggcagtggaagacagcagaacatcatcgcctcca-gggtgatc 471
|| |||||||||||||||||||| ||||||| || |||||||| |||||| ||||||||
Sbjct: 395 tcgtcggtagcatccttggcagtcgaagacaacaagacatcatcacctccaggggtgatc 454
Query: 472 ctccagaaacttggtcacattgtacaccttgccgccgatga 512
||||| |||||||||||||||||||||||||||||||||||
Sbjct: 455 ctccaaaaacttggtcacattgtacaccttgccgccgatga 495
>gb|CF278982.1|CF278982 14ETL--05-B23.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--05-B23, mRNA sequence
Length = 520
Score = 291 bits (147), Expect = 2e-076
Identities = 244/275 (88%), Gaps = 1/275 (0%)
Strand = Plus / Plus
Query: 239 accaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggc 298
||||||||||||||||||||||||| |||||| | ||||| |||||||||||||| ||
Sbjct: 244 accaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagtgtggt 303
Query: 299 tgcttggggggcgtgtac-ttcaccttggtgggtatcgtggctgcatcaatctcacccac 357
||||| |||||||||||| |||||||||||||||||||||| ||| |||| || || ||
Sbjct: 304 tgcttcgggggcgtgtacattcaccttggtgggtatcgtggttgcgacaatgtcgccgac 363
Query: 358 taagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatc 417
| ||||| |||||||| || || |||||| |||||||||||||||||||||| || ||
Sbjct: 364 ataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagtcgtc 423
Query: 418 ggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccag 477
|||||||||||||||||| ||||||| || |||||||| |||||||||||||||||||
Sbjct: 424 ggtagcatccttggcagtcgaagacaacaagacatcatcacctccagggtgatcctccaa 483
Query: 478 aaacttggtcacattgtacaccttgccgccgatga 512
|||||||||||||||||||||||||||||||||||
Sbjct: 484 aaacttggtcacattgtacaccttgccgccgatga 518
>gb|CV727770.1|CV727770 14Salt--06-B09.b1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--06-B09, mRNA sequence
Length = 475
Score = 272 bits (137), Expect = 2e-070
Identities = 260/301 (86%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
|||| ||||| || ||||||||||| ||||||||||| || |||| |||| ||| || |
Sbjct: 175 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 234
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||| ||||||||||||||||||||||||| |||||| | ||||| |||||||||||||
Sbjct: 235 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 294
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| || ||||| |||||||||||||||||||||||||||||||||| ||| ||||| || |
Sbjct: 295 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 354
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || | ||||| |||||||| || || |||||| |||||||||||||||||||||| |
Sbjct: 355 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 414
Query: 414 catcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcct 473
| |||||||||||||||||||| ||||||| || |||||||| ||||||||||||||||
Sbjct: 415 cgtcggtagcatccttggcagtcgaagacaacaagacatcatcacctccagggtgatcct 474
Query: 474 c 474
|
Sbjct: 475 c 475
>gb|CV721047.1|CV721047 YBH--02-L09.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--02-L09, mRNA sequence
Length = 372
Score = 270 bits (136), Expect = 9e-070
Identities = 211/236 (89%)
Strand = Plus / Minus
Query: 326 gtgggtatcgtggctgcatcaatctcacccactaagtactcgtccatcattgcacgggca 385
||||||||||||| ||| ||||| || || || | ||||| |||||||| || || |||
Sbjct: 372 gtgggtatcgtggttgcgtcaatgtcgccgacataatactcatccatcatcgcccgagca 313
Query: 386 gtgctgctgtgccccacatcttcgaaatcatcggtagcatccttggcagtggaagacagc 445
||| |||||||||||||||||||||| || |||||||||||||||||||||||||||| |
Sbjct: 312 gtggtgctgtgccccacatcttcgaagtcgtcggtagcatccttggcagtggaagacaac 253
Query: 446 agaacatcatcgcctccagggtgatcctccagaaacttggtcacattgtacaccttgccg 505
| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 252 aagacatcatcacctccagggtgatcctccaaaaacttggtcacattgtacaccttgccg 193
Query: 506 ccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcgagggt 561
||||||| ||||||||| |||||||||||||||||||||| |||||||| |||||
Sbjct: 192 ccgatgatgagccagcaatcgtccttggtgttgtgcttggagacctcctccagggt 137
>gb|AU166181.1|AU166181 AU166181 Rice immature leaf including apical meristem (under long
day condition) Oryza sativa (japonica cultivar-group)
cDNA clone E50445, mRNA sequence
Length = 458
Score = 242 bits (122), Expect = 2e-061
Identities = 233/270 (86%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
|||| ||||| || ||||||||||| ||||||||||| || |||| |||| ||| || |
Sbjct: 279 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 220
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||| ||||||||||||||||||||||||| |||||| | ||||| |||||||||||||
Sbjct: 219 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 160
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| || ||||| |||||||||||||||||||||||||||||||||| ||| ||||| || |
Sbjct: 159 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 100
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || | ||||| |||||||| || || |||||| |||||||||||||||||||||| |
Sbjct: 99 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 40
Query: 414 catcggtagcatccttggcagtggaagaca 443
| |||||||||||||||||||| |||||||
Sbjct: 39 cgtcggtagcatccttggcagtcgaagaca 10
>gb|CV721497.1|CV721497 YBH--04-F04.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--04-F04, mRNA sequence
Length = 455
Score = 242 bits (122), Expect = 2e-061
Identities = 233/270 (86%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
|||| ||||| || ||||||||||| ||||||||||| || |||| |||| ||| || |
Sbjct: 178 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 237
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||| ||||||||||||||||||||||||| |||||| | ||||| |||||||||||||
Sbjct: 238 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 297
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| || ||||| |||||||||||||||||||||||||||||||||| ||| ||||| || |
Sbjct: 298 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 357
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || | ||||| |||||||| || || |||||| |||||||||||||||||||||| |
Sbjct: 358 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 417
Query: 414 catcggtagcatccttggcagtggaagaca 443
| |||||||||||||||||||| |||||||
Sbjct: 418 cgtcggtagcatccttggcagtcgaagaca 447
>gb|AACV01003113.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg003113, whole
genome shotgun sequence
Length = 38240
Score = 228 bits (115), Expect = 3e-057
Identities = 223/259 (86%)
Strand = Plus / Plus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
|||| ||||| || ||||||||||| ||||||||||| || |||| |||| ||| || |
Sbjct: 27689 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 27748
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||| ||||||||||||||||||||||||| |||||| | ||||| |||||||||||||
Sbjct: 27749 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 27808
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| || ||||| |||||||||||||||||||||||||||||||||| ||| ||||| || |
Sbjct: 27809 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 27868
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || | ||||| |||||||| || || |||||| |||||||||||||||||||||| |
Sbjct: 27869 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 27928
Query: 414 catcggtagcatccttggc 432
| |||||||||||||||||
Sbjct: 27929 cgtcggtagcatccttggc 27947
Score = 89.7 bits (45), Expect = 2e-015
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 497 accttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcg 556
|||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 28867 accttgccgccgatgatgagccagcaatcgtccttggtgttgtgcttggagacctcctcc 28926
Query: 557 agggt 561
|||||
Sbjct: 28927 agggt 28931
Score = 89.7 bits (45), Expect = 2e-015
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 432 cagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttggtcacat 491
|||| ||||||| || |||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 28037 cagtcgaagacaacaagacatcatcacctccagggtgatcctccaaaaacttggtcacat 28096
Query: 492 tgtacacct 500
|||||||||
Sbjct: 28097 tgtacacct 28105
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 228 bits (115), Expect = 3e-057
Identities = 223/259 (86%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
|||| ||||| || ||||||||||| ||||||||||| || |||| |||| ||| || |
Sbjct: 42933263 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 42933204
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||| ||||||||||||||||||||||||| |||||| | ||||| |||||||||||||
Sbjct: 42933203 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 42933144
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| || ||||| |||||||||||||||||||||||||||||||||| ||| ||||| || |
Sbjct: 42933143 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 42933084
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || | ||||| |||||||| || || |||||| |||||||||||||||||||||| |
Sbjct: 42933083 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 42933024
Query: 414 catcggtagcatccttggc 432
| |||||||||||||||||
Sbjct: 42933023 cgtcggtagcatccttggc 42933005
Score = 89.7 bits (45), Expect = 2e-015
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 432 cagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttggtcacat 491
|||| ||||||| || |||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 42932915 cagtcgaagacaacaagacatcatcacctccagggtgatcctccaaaaacttggtcacat 42932856
Query: 492 tgtacacct 500
|||||||||
Sbjct: 42932855 tgtacacct 42932847
Score = 89.7 bits (45), Expect = 2e-015
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcg 556
|||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 42932085 accttgccgccgatgatgagccagcaatcgtccttggtgttgtgcttggagacctcctcc 42932026
Query: 557 agggt 561
|||||
Sbjct: 42932025 agggt 42932021
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 608 gggtggaggaggcggaggcg 627
||||||||||||||||||||
Sbjct: 36516752 gggtggaggaggcggaggcg 36516771
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcga 628
||||||||||||||||||||
Sbjct: 24599861 ggtggaggaggcggaggcga 24599880
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 38644521 ggtggaggaggcggaggcg 38644503
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 28506478 ggtggaggaggcggaggcg 28506460
Score = 38.2 bits (19), Expect = 6.0
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 33 agaagtgattttatactaataga 55
||||||||||||||| |||||||
Sbjct: 11454428 agaagtgattttatagtaataga 11454450
>ref|NT_079923.2| Oryza sativa (japonica cultivar-group)
Length = 2970704
Score = 228 bits (115), Expect = 3e-057
Identities = 223/259 (86%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
|||| ||||| || ||||||||||| ||||||||||| || |||| |||| ||| || |
Sbjct: 2561557 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 2561498
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||| ||||||||||||||||||||||||| |||||| | ||||| |||||||||||||
Sbjct: 2561497 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 2561438
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| || ||||| |||||||||||||||||||||||||||||||||| ||| ||||| || |
Sbjct: 2561437 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 2561378
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || | ||||| |||||||| || || |||||| |||||||||||||||||||||| |
Sbjct: 2561377 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 2561318
Query: 414 catcggtagcatccttggc 432
| |||||||||||||||||
Sbjct: 2561317 cgtcggtagcatccttggc 2561299
Score = 89.7 bits (45), Expect = 2e-015
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 432 cagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttggtcacat 491
|||| ||||||| || |||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 2561209 cagtcgaagacaacaagacatcatcacctccagggtgatcctccaaaaacttggtcacat 2561150
Query: 492 tgtacacct 500
|||||||||
Sbjct: 2561149 tgtacacct 2561141
Score = 89.7 bits (45), Expect = 2e-015
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcg 556
|||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 2560379 accttgccgccgatgatgagccagcaatcgtccttggtgttgtgcttggagacctcctcc 2560320
Query: 557 agggt 561
|||||
Sbjct: 2560319 agggt 2560315
>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0518C01
Length = 173555
Score = 228 bits (115), Expect = 3e-057
Identities = 223/259 (86%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
|||| ||||| || ||||||||||| ||||||||||| || |||| |||| ||| || |
Sbjct: 46327 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 46268
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||| ||||||||||||||||||||||||| |||||| | ||||| |||||||||||||
Sbjct: 46267 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 46208
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| || ||||| |||||||||||||||||||||||||||||||||| ||| ||||| || |
Sbjct: 46207 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 46148
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || | ||||| |||||||| || || |||||| |||||||||||||||||||||| |
Sbjct: 46147 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 46088
Query: 414 catcggtagcatccttggc 432
| |||||||||||||||||
Sbjct: 46087 cgtcggtagcatccttggc 46069
Score = 89.7 bits (45), Expect = 2e-015
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 432 cagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttggtcacat 491
|||| ||||||| || |||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 45979 cagtcgaagacaacaagacatcatcacctccagggtgatcctccaaaaacttggtcacat 45920
Query: 492 tgtacacct 500
|||||||||
Sbjct: 45919 tgtacacct 45911
Score = 89.7 bits (45), Expect = 2e-015
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcg 556
|||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 45149 accttgccgccgatgatgagccagcaatcgtccttggtgttgtgcttggagacctcctcc 45090
Query: 557 agggt 561
|||||
Sbjct: 45089 agggt 45085
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 228 bits (115), Expect = 3e-057
Identities = 223/259 (86%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
|||| ||||| || ||||||||||| ||||||||||| || |||| |||| ||| || |
Sbjct: 17019813 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 17019754
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||| ||||||||||||||||||||||||| |||||| | ||||| |||||||||||||
Sbjct: 17019753 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 17019694
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| || ||||| |||||||||||||||||||||||||||||||||| ||| ||||| || |
Sbjct: 17019693 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 17019634
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || | ||||| |||||||| || || |||||| |||||||||||||||||||||| |
Sbjct: 17019633 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 17019574
Query: 414 catcggtagcatccttggc 432
| |||||||||||||||||
Sbjct: 17019573 cgtcggtagcatccttggc 17019555
Score = 89.7 bits (45), Expect = 2e-015
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 432 cagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttggtcacat 491
|||| ||||||| || |||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 17019465 cagtcgaagacaacaagacatcatcacctccagggtgatcctccaaaaacttggtcacat 17019406
Query: 492 tgtacacct 500
|||||||||
Sbjct: 17019405 tgtacacct 17019397
Score = 89.7 bits (45), Expect = 2e-015
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcg 556
|||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 17018635 accttgccgccgatgatgagccagcaatcgtccttggtgttgtgcttggagacctcctcc 17018576
Query: 557 agggt 561
|||||
Sbjct: 17018575 agggt 17018571
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 608 gggtggaggaggcggaggcg 627
||||||||||||||||||||
Sbjct: 10717929 gggtggaggaggcggaggcg 10717948
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 12831178 ggtggaggaggcggaggcg 12831160
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 2886730 ggtggaggaggcggaggcg 2886712
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 228 bits (115), Expect = 3e-057
Identities = 223/259 (86%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
|||| ||||| || ||||||||||| ||||||||||| || |||| |||| ||| || |
Sbjct: 42221534 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 42221475
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||| ||||||||||||||||||||||||| |||||| | ||||| |||||||||||||
Sbjct: 42221474 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 42221415
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| || ||||| |||||||||||||||||||||||||||||||||| ||| ||||| || |
Sbjct: 42221414 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 42221355
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || | ||||| |||||||| || || |||||| |||||||||||||||||||||| |
Sbjct: 42221354 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 42221295
Query: 414 catcggtagcatccttggc 432
| |||||||||||||||||
Sbjct: 42221294 cgtcggtagcatccttggc 42221276
Score = 89.7 bits (45), Expect = 2e-015
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 432 cagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttggtcacat 491
|||| ||||||| || |||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 42221186 cagtcgaagacaacaagacatcatcacctccagggtgatcctccaaaaacttggtcacat 42221127
Query: 492 tgtacacct 500
|||||||||
Sbjct: 42221126 tgtacacct 42221118
Score = 89.7 bits (45), Expect = 2e-015
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcg 556
|||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 42220356 accttgccgccgatgatgagccagcaatcgtccttggtgttgtgcttggagacctcctcc 42220297
Query: 557 agggt 561
|||||
Sbjct: 42220296 agggt 42220292
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 608 gggtggaggaggcggaggcg 627
||||||||||||||||||||
Sbjct: 35919650 gggtggaggaggcggaggcg 35919669
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcga 628
||||||||||||||||||||
Sbjct: 24108401 ggtggaggaggcggaggcga 24108420
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 38032899 ggtggaggaggcggaggcg 38032881
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 28088451 ggtggaggaggcggaggcg 28088433
Score = 38.2 bits (19), Expect = 6.0
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 33 agaagtgattttatactaataga 55
||||||||||||||| |||||||
Sbjct: 11594918 agaagtgattttatagtaataga 11594940
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 228 bits (115), Expect = 3e-057
Identities = 223/259 (86%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
|||| ||||| || ||||||||||| ||||||||||| || |||| |||| ||| || |
Sbjct: 42852593 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcca 42852534
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||| ||||||||||||||||||||||||| |||||| | ||||| |||||||||||||
Sbjct: 42852533 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 42852474
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcac 353
| || ||||| |||||||||||||||||||||||||||||||||| ||| ||||| || |
Sbjct: 42852473 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaatgtcgc 42852414
Query: 354 ccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaat 413
| || | ||||| |||||||| || || |||||| |||||||||||||||||||||| |
Sbjct: 42852413 cgacataatactcatccatcatcgcccgagcagtggtgctgtgccccacatcttcgaagt 42852354
Query: 414 catcggtagcatccttggc 432
| |||||||||||||||||
Sbjct: 42852353 cgtcggtagcatccttggc 42852335
Score = 89.7 bits (45), Expect = 2e-015
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 432 cagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttggtcacat 491
|||| ||||||| || |||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 42852245 cagtcgaagacaacaagacatcatcacctccagggtgatcctccaaaaacttggtcacat 42852186
Query: 492 tgtacacct 500
|||||||||
Sbjct: 42852185 tgtacacct 42852177
Score = 89.7 bits (45), Expect = 2e-015
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcg 556
|||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 42851415 accttgccgccgatgatgagccagcaatcgtccttggtgttgtgcttggagacctcctcc 42851356
Query: 557 agggt 561
|||||
Sbjct: 42851355 agggt 42851351
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 608 gggtggaggaggcggaggcg 627
||||||||||||||||||||
Sbjct: 36436082 gggtggaggaggcggaggcg 36436101
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcga 628
||||||||||||||||||||
Sbjct: 24521144 ggtggaggaggcggaggcga 24521163
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 38563851 ggtggaggaggcggaggcg 38563833
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 28425808 ggtggaggaggcggaggcg 28425790
Score = 38.2 bits (19), Expect = 6.0
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 33 agaagtgattttatactaataga 55
||||||||||||||| |||||||
Sbjct: 11456646 agaagtgattttatagtaataga 11456668
>gb|AU088658.1|AU088658 AU088658 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11434, mRNA sequence
Length = 712
Score = 226 bits (114), Expect = 1e-056
Identities = 318/386 (82%)
Strand = Plus / Minus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 445 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 386
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 385 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 326
Query: 305 gggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtac 364
||||| ||||||| | | | |||||| |||| || || || || || || | |||
Sbjct: 325 gggggaacgtacttcgtcctcgcgggtattgtggatgtgtcgatgtcgccaacgtaatac 266
Query: 365 tcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagca 424
|| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || || ||
Sbjct: 265 tcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtcgcg 206
Query: 425 tccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttg 484
|||||| |||| ||||| |||| |||||||| ||||| || || ||||| || || ||
Sbjct: 205 tccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaatttc 146
Query: 485 gtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttg 544
| ||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 145 gacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgcttg 86
Query: 545 gccacctcctcgagggtgtacacctt 570
|| |||||||| ||||| ||||||||
Sbjct: 85 gcgacctcctccagggtatacacctt 60
>gb|AU092662.1|AU092662 AU092662 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52787, mRNA sequence
Length = 695
Score = 226 bits (114), Expect = 1e-056
Identities = 318/386 (82%)
Strand = Plus / Minus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 499 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 440
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 439 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 380
Query: 305 gggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtac 364
||||| ||||||| | | | |||||| |||| || || || || || || | |||
Sbjct: 379 gggggaacgtacttcgtcctcgcgggtattgtggatgtgtcgatgtcgccaacgtaatac 320
Query: 365 tcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagca 424
|| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || || ||
Sbjct: 319 tcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtcgcg 260
Query: 425 tccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttg 484
|||||| |||| ||||| |||| |||||||| ||||| || || ||||| || || ||
Sbjct: 259 tccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaatttc 200
Query: 485 gtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttg 544
| ||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 199 gacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgcttg 140
Query: 545 gccacctcctcgagggtgtacacctt 570
|| |||||||| ||||| ||||||||
Sbjct: 139 gcgacctcctccagggtatacacctt 114
>gb|CF295047.1|CF295047 30DGS--04-M23.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--04-M23, mRNA sequence
Length = 688
Score = 226 bits (114), Expect = 1e-056
Identities = 318/386 (82%)
Strand = Plus / Minus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 584 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 525
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 524 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 465
Query: 305 gggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtac 364
||||| ||||||| | | | |||||| |||| || || || || || || | |||
Sbjct: 464 gggggaacgtacttcgtcctcgcgggtattgtggatgtgtcgatgtcgccaacgtaatac 405
Query: 365 tcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagca 424
|| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || || ||
Sbjct: 404 tcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtcgcg 345
Query: 425 tccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttg 484
|||||| |||| ||||| |||| |||||||| ||||| || || ||||| || || ||
Sbjct: 344 tccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaatttc 285
Query: 485 gtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttg 544
| ||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 284 gacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgcttg 225
Query: 545 gccacctcctcgagggtgtacacctt 570
|| |||||||| ||||| ||||||||
Sbjct: 224 gcgacctcctccagggtatacacctt 199
>gb|CF323964.1|CF323964 HDN--05-D24.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library II (HDN) Oryza sativa (japonica
cultivar-group) cDNA clone HDN--05-D24, mRNA sequence
Length = 563
Score = 226 bits (114), Expect = 1e-056
Identities = 318/386 (82%)
Strand = Plus / Minus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 532 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 473
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 472 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 413
Query: 305 gggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtac 364
||||| ||||||| | | | |||||| |||| || || || || || || | |||
Sbjct: 412 gggggaacgtacttcgtcctcgcgggtattgtggatgtgtcgatgtcgccaacgtaatac 353
Query: 365 tcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagca 424
|| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || || ||
Sbjct: 352 tcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtcgcg 293
Query: 425 tccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttg 484
|||||| |||| ||||| |||| |||||||| ||||| || || ||||| || || ||
Sbjct: 292 tccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaatttc 233
Query: 485 gtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttg 544
| ||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 232 gacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgcttg 173
Query: 545 gccacctcctcgagggtgtacacctt 570
|| |||||||| ||||| ||||||||
Sbjct: 172 gcgacctcctccagggtatacacctt 147
>gb|CF325902.1|CF325902 JMT1--04-I16.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--04-I16, mRNA sequence
Length = 640
Score = 226 bits (114), Expect = 1e-056
Identities = 318/386 (82%)
Strand = Plus / Minus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 534 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 475
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 474 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 415
Query: 305 gggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtac 364
||||| ||||||| | | | |||||| |||| || || || || || || | |||
Sbjct: 414 gggggaacgtacttcgtcctcgcgggtattgtggatgtgtcgatgtcgccaacgtaatac 355
Query: 365 tcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagca 424
|| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || || ||
Sbjct: 354 tcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtcgcg 295
Query: 425 tccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttg 484
|||||| |||| ||||| |||| |||||||| ||||| || || ||||| || || ||
Sbjct: 294 tccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaatttc 235
Query: 485 gtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttg 544
| ||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 234 gacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgcttg 175
Query: 545 gccacctcctcgagggtgtacacctt 570
|| |||||||| ||||| ||||||||
Sbjct: 174 gcgacctcctccagggtatacacctt 149
>dbj|AK064821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E24, full
insert sequence
Length = 743
Score = 226 bits (114), Expect = 1e-056
Identities = 318/386 (82%)
Strand = Plus / Minus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 550 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 491
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 490 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 431
Query: 305 gggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtac 364
||||| ||||||| | | | |||||| |||| || || || || || || | |||
Sbjct: 430 gggggaacgtacttcgtcctcgcgggtattgtggatgtgtcgatgtcgccaacgtaatac 371
Query: 365 tcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagca 424
|| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || || ||
Sbjct: 370 tcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtcgcg 311
Query: 425 tccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttg 484
|||||| |||| ||||| |||| |||||||| ||||| || || ||||| || || ||
Sbjct: 310 tccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaatttc 251
Query: 485 gtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttg 544
| ||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 250 gacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgcttg 191
Query: 545 gccacctcctcgagggtgtacacctt 570
|| |||||||| ||||| ||||||||
Sbjct: 190 gcgacctcctccagggtatacacctt 165
>gb|AU163849.1|AU163849 AU163849 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E11192, mRNA sequence
Length = 676
Score = 220 bits (111), Expect = 8e-055
Identities = 317/386 (82%)
Strand = Plus / Minus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 482 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 423
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 422 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 363
Query: 305 gggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtac 364
||||| ||||||| | | | |||||| |||| || || || || || || | |||
Sbjct: 362 gggggaacgtacttcgtcctcgcgggtattgtggatgtgtcgatgtcgccaacgtaatac 303
Query: 365 tcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagca 424
|| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || || ||
Sbjct: 302 tcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtcgcg 243
Query: 425 tccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttg 484
|||||| |||| ||||| |||| |||||||| ||||| || || ||||| || || ||
Sbjct: 242 tccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaatttc 183
Query: 485 gtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttg 544
| ||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 182 gacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgcttg 123
Query: 545 gccacctcctcgagggtgtacacctt 570
|| |||| ||| ||||| ||||||||
Sbjct: 122 gcgacctnctccagggtatacacctt 97
>gb|CF282412.1|CF282412 14ETL--09-O18.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--09-O18, mRNA sequence
Length = 681
Score = 218 bits (110), Expect = 3e-054
Identities = 317/386 (82%)
Strand = Plus / Minus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 552 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 493
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || ||||
Sbjct: 492 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgctct 433
Query: 305 gggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtac 364
||||| ||||||| | | | |||||| |||| || || || || || || | |||
Sbjct: 432 gggggaacgtacttcgtcctcgcgggtattgtggatgtgtcgatgtcgccaacgtaatac 373
Query: 365 tcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagca 424
|| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || || ||
Sbjct: 372 tcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtcgcg 313
Query: 425 tccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttg 484
|||||| |||| ||||| |||| |||||||| ||||| || || ||||| || || ||
Sbjct: 312 tccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaatttc 253
Query: 485 gtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttg 544
| ||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 252 gacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgcttg 193
Query: 545 gccacctcctcgagggtgtacacctt 570
|| |||||||| ||||| ||||||||
Sbjct: 192 gcgacctcctccagggtatacacctt 167
>gb|CV722495.1|CV722495 YTPSP--01-I02.b1 TPSP-overexpression transgenic rice yeast two
hybrid lambda phage cDNA library (YTPSP) Oryza sativa
(japonica cultivar-group) cDNA clone YTPSP--01-I02, mRNA
sequence
Length = 515
Score = 214 bits (108), Expect = 5e-053
Identities = 294/356 (82%)
Strand = Plus / Minus
Query: 215 gccagacccagtattgcgagggggaccaaaaactggaggatcttgatgacgaactcctgg 274
||||| |||| ||| |||||||| ||||| ||||||||||||||||||| ||||||| ||
Sbjct: 510 gccaggcccaatatggcgaggggaaccaagaactggaggatcttgatgatgaactccggg 451
Query: 275 gtcttgtcctggttgtagtgcggctgcttggggggcgtgtacttcaccttggtgggtatc 334
|||||||||||||||||||| || ||||| ||||| ||||||| | | | ||||||
Sbjct: 450 gtcttgtcctggttgtagtgtggttgctttgggggaacgtacttcgtcctcgcgggtatt 391
Query: 335 gtggctgcatcaatctcacccactaagtactcgtccatcattgcacgggcagtgctgctg 394
|||| || || || || || || | ||||| |||||||| ||||| ||||| |||||
Sbjct: 390 gtggatgtgtcgatgtcgccaacgtaatactcatccatcatcgcacgagcagtcgtgctg 331
Query: 395 tgccccacatcttcgaaatcatcggtagcatccttggcagtggaagacagcagaacatca 454
||||| ||||| || ||||| || || || |||||| |||| ||||| |||| ||||||
Sbjct: 330 tgcccgacatcctcaaaatcgtcagtcgcgtccttgccagttgaagatagcaagacatca 271
Query: 455 tcgcctccagggtgatcctccagaaacttggtcacattgtacaccttgccgccgatgacg 514
|| ||||| || || ||||| || || || | ||||||||| ||||| |||||||||| |
Sbjct: 270 tcacctcctggatggtcctcaaggaatttcgacacattgtatacctttccgccgatgatg 211
Query: 515 agccagcagtcgtccttggtgttgtgcttggccacctcctcgagggtgtacacctt 570
||||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||
Sbjct: 210 agccagcagtcgtccttggagttgtgcttggcgacctcctccagggtatacacctt 155
>gb|CF305853.1|CF305853 HDA1--01-O21.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--01-O21, mRNA sequence
Length = 486
Score = 210 bits (106), Expect = 7e-052
Identities = 289/350 (82%)
Strand = Plus / Minus
Query: 221 cccagtattgcgagggggaccaaaaactggaggatcttgatgacgaactcctgggtcttg 280
|||| ||| |||||||| ||||| ||||||||||||||||||| ||||||| ||||||||
Sbjct: 486 cccaatatggcgaggggaaccaagaactggaggatcttgatgatgaactccggggtcttg 427
Query: 281 tcctggttgtagtgcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggct 340
|||||||||||||| || ||||| ||||| ||||||| | | | |||||| |||| |
Sbjct: 426 tcctggttgtagtgtggttgctttgggggaacgtacttcgtcctcgcgggtattgtggat 367
Query: 341 gcatcaatctcacccactaagtactcgtccatcattgcacgggcagtgctgctgtgcccc 400
| || || || || || | ||||| |||||||| ||||| ||||| ||||||||||
Sbjct: 366 gtgtcgatgtcgccaacgtaatactcatccatcatcgcacgagcagtcgtgctgtgcccg 307
Query: 401 acatcttcgaaatcatcggtagcatccttggcagtggaagacagcagaacatcatcgcct 460
||||| || ||||| || || || |||||| |||| ||||| |||| |||||||| |||
Sbjct: 306 acatcctcaaaatcgtcagtcgcgtccttgccagttgaagatagcaagacatcatcacct 247
Query: 461 ccagggtgatcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccag 520
|| || || ||||| || || || | ||||||||| ||||| |||||||||| |||||||
Sbjct: 246 cctggatggtcctcaaggaatttcgacacattgtatacctttccgccgatgatgagccag 187
Query: 521 cagtcgtccttggtgttgtgcttggccacctcctcgagggtgtacacctt 570
||||||||||||| |||||||||||| |||||||| ||||| ||||||||
Sbjct: 186 cagtcgtccttggagttgtgcttggcgacctcctccagggtatacacctt 137
>gb|CF318817.1|CF318817 HD--09-B14.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--09-B14, mRNA sequence
Length = 632
Score = 208 bits (105), Expect = 3e-051
Identities = 282/341 (82%)
Strand = Plus / Minus
Query: 230 gcgagggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttg 289
|||||||| ||||| ||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 626 gcgaggggaaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttg 567
Query: 290 tagtgcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatc 349
||||| || ||||| ||||| ||||||| | | | |||||| |||| || || ||
Sbjct: 566 tagtgtggttgctttgggggaacgtacttcgtcctcgcgggtattgtggatgtgtcgatg 507
Query: 350 tcacccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcg 409
|| || || | ||||| |||||||| ||||| ||||| |||||||||| ||||| ||
Sbjct: 506 tcgccaacgtaatactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctca 447
Query: 410 aaatcatcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtga 469
||||| || || || |||||| |||| ||||| |||| |||||||| ||||| || ||
Sbjct: 446 aaatcgtcagtcgcgtccttgccagttgaagatagcaagacatcatcacctcctggatgg 387
Query: 470 tcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtcc 529
||||| || || || | ||||||||| ||||| |||||||||| ||||||||||||||||
Sbjct: 386 tcctcaaggaatttcgacacattgtatacctttccgccgatgatgagccagcagtcgtcc 327
Query: 530 ttggtgttgtgcttggccacctcctcgagggtgtacacctt 570
|||| |||||||||||| |||||||| ||||| ||||||||
Sbjct: 326 ttggagttgtgcttggcgacctcctccagggtatacacctt 286
>gb|CF321374.1|CF321374 HD--12-J19.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--12-J19, mRNA sequence
Length = 592
Score = 208 bits (105), Expect = 3e-051
Identities = 282/341 (82%)
Strand = Plus / Minus
Query: 230 gcgagggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttg 289
|||||||| ||||| ||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 588 gcgaggggaaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttg 529
Query: 290 tagtgcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatc 349
||||| || ||||| ||||| ||||||| | | | |||||| |||| || || ||
Sbjct: 528 tagtgtggttgctttgggggaacgtacttcgtcctcgcgggtattgtggatgtgtcgatg 469
Query: 350 tcacccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcg 409
|| || || | ||||| |||||||| ||||| ||||| |||||||||| ||||| ||
Sbjct: 468 tcgccaacgtaatactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctca 409
Query: 410 aaatcatcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtga 469
||||| || || || |||||| |||| ||||| |||| |||||||| ||||| || ||
Sbjct: 408 aaatcgtcagtcgcgtccttgccagttgaagatagcaagacatcatcacctcctggatgg 349
Query: 470 tcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtcc 529
||||| || || || | ||||||||| ||||| |||||||||| ||||||||||||||||
Sbjct: 348 tcctcaaggaatttcgacacattgtatacctttccgccgatgatgagccagcagtcgtcc 289
Query: 530 ttggtgttgtgcttggccacctcctcgagggtgtacacctt 570
|||| |||||||||||| |||||||| ||||| ||||||||
Sbjct: 288 ttggagttgtgcttggcgacctcctccagggtatacacctt 248
>gb|CF324621.1|CF324621 JMT1--01-A12.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--01-A12, mRNA sequence
Length = 495
Score = 208 bits (105), Expect = 3e-051
Identities = 282/341 (82%)
Strand = Plus / Minus
Query: 230 gcgagggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttg 289
|||||||| ||||| ||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 489 gcgaggggaaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttg 430
Query: 290 tagtgcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatc 349
||||| || ||||| ||||| ||||||| | | | |||||| |||| || || ||
Sbjct: 429 tagtgtggttgctttgggggaacgtacttcgtcctcgcgggtattgtggatgtgtcgatg 370
Query: 350 tcacccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcg 409
|| || || | ||||| |||||||| ||||| ||||| |||||||||| ||||| ||
Sbjct: 369 tcgccaacgtaatactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctca 310
Query: 410 aaatcatcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtga 469
||||| || || || |||||| |||| ||||| |||| |||||||| ||||| || ||
Sbjct: 309 aaatcgtcagtcgcgtccttgccagttgaagatagcaagacatcatcacctcctggatgg 250
Query: 470 tcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtcc 529
||||| || || || | ||||||||| ||||| |||||||||| ||||||||||||||||
Sbjct: 249 tcctcaaggaatttcgacacattgtatacctttccgccgatgatgagccagcagtcgtcc 190
Query: 530 ttggtgttgtgcttggccacctcctcgagggtgtacacctt 570
|||| |||||||||||| |||||||| ||||| ||||||||
Sbjct: 189 ttggagttgtgcttggcgacctcctccagggtatacacctt 149
>gb|AU070878.1|AU070878 AU070878 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10408_1A, mRNA sequence
Length = 388
Score = 204 bits (103), Expect = 5e-050
Identities = 158/174 (90%), Gaps = 2/174 (1%)
Strand = Plus / Minus
Query: 390 tgctgtgccccacatcttcgaaatcatcggtagcatccttggc-agtggaagac-agcag 447
|||||||||||||||||||||| || ||||||||||||||||| ||| |||||| | ||
Sbjct: 385 tgctgtgccccacatcttcgaagtcgtcggtagcatccttggccagtcgaagaccaacaa 326
Query: 448 aacatcatcgcctccagggtgatcctccagaaacttggtcacattgtacaccttgccgcc 507
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 325 gncatcatcacctccagggtgatcctccaaaaacttggtcacattgtacaccttgccgcc 266
Query: 508 gatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcgagggt 561
||||| ||||||||| |||||||||||||||||||||| |||||||| |||||
Sbjct: 265 gatgatgagccagcaatcgtccttggtgttgtgcttggagacctcctccagggt 212
>gb|CA999252.1|CA999252 S234P_C07 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 548
Score = 202 bits (102), Expect = 2e-049
Identities = 270/326 (82%)
Strand = Plus / Minus
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || ||||||
Sbjct: 544 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttg 485
Query: 305 gggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtac 364
||||| ||||||| | | | |||||| |||| || || || || || || | |||
Sbjct: 484 gggggaacgtacttcgtcctcgcgggtattgtggatgtgtcgatgtcgccaacgtaatac 425
Query: 365 tcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagca 424
|| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || || ||
Sbjct: 424 tcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtcgcg 365
Query: 425 tccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttg 484
|||||| |||| ||||| |||| |||||||| ||||| || || ||||| || || ||
Sbjct: 364 tccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaatttc 305
Query: 485 gtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttg 544
| ||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 304 gacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgcttg 245
Query: 545 gccacctcctcgagggtgtacacctt 570
|| |||||||| ||||| ||||||||
Sbjct: 244 gcgacctcctccagggtatacacctt 219
>gb|CF324999.1|CF324999 JMT1--02-A18.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--02-A18, mRNA sequence
Length = 495
Score = 194 bits (98), Expect = 4e-047
Identities = 282/342 (82%), Gaps = 1/342 (0%)
Strand = Plus / Minus
Query: 230 gcgagggggaccaaaaactggaggatcttgatgacgaactcctgggt-cttgtcctggtt 288
|||||||| ||||| ||||||||||||||||||| ||||||| |||| ||||||||||||
Sbjct: 489 gcgaggggaaccaagaactggaggatcttgatgatgaactccggggttcttgtcctggtt 430
Query: 289 gtagtgcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaat 348
|||||| || ||||| ||||| ||||||| | | | |||||| |||| || || ||
Sbjct: 429 gtagtgtggttgctttgggggaacgtacttcgtcctcgcgggtattgtggatgtgtcgat 370
Query: 349 ctcacccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttc 408
|| || || | ||||| |||||||| ||||| ||||| |||||||||| ||||| ||
Sbjct: 369 gtcgccaacgtaatactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctc 310
Query: 409 gaaatcatcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtg 468
||||| || || || |||||| |||| ||||| |||| |||||||| ||||| || ||
Sbjct: 309 aaaatcgtcagtcgcgtccttgccagttgaagatagcaagacatcatcacctcctggatg 250
Query: 469 atcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtc 528
||||| || || || | ||||||||| ||||| |||||||||| |||||||||||||||
Sbjct: 249 gtcctcaaggaatttcgacacattgtatacctttccgccgatgatgagccagcagtcgtc 190
Query: 529 cttggtgttgtgcttggccacctcctcgagggtgtacacctt 570
||||| |||||||||||| |||||||| ||||| ||||||||
Sbjct: 189 cttggagttgtgcttggcgacctcctccagggtatacacctt 148
>gb|CV725728.1|CV725728 14Salt--02-P08.g1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--02-P08, mRNA sequence
Length = 489
Score = 186 bits (94), Expect = 1e-044
Identities = 265/322 (82%)
Strand = Plus / Minus
Query: 249 ggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttggggg 308
||||||||||||||| ||||||| |||||||||||||||||||||| || ||||| ||||
Sbjct: 489 ggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgctttgggg 430
Query: 309 gcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtactcgt 368
| ||||||| | | | |||||| |||| || || || || || || | ||||| |
Sbjct: 429 gaacgtacttcgtcctcgcgggtattgtggatgtgtcgatgtcgccaacgtaatactcat 370
Query: 369 ccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagcatcct 428
||||||| ||||| ||||| |||||||||| ||||| || ||||| || || || ||||
Sbjct: 369 ccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtcgcgtcct 310
Query: 429 tggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttggtca 488
|| |||| ||||| |||| |||||||| ||||| || || ||||| || || || | ||
Sbjct: 309 tgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaatttcgaca 250
Query: 489 cattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggcca 548
||||||| ||||| |||||||||| |||||||||||||||||||| |||||||||||| |
Sbjct: 249 cattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgcttggcga 190
Query: 549 cctcctcgagggtgtacacctt 570
||||||| ||||| ||||||||
Sbjct: 189 cctcctccagggtatacacctt 168
>gb|AU032790.1|AU032790 AU032790 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S14158_5A, mRNA sequence
Length = 713
Score = 184 bits (93), Expect = 4e-044
Identities = 293/357 (82%), Gaps = 2/357 (0%)
Strand = Plus / Minus
Query: 215 gccagacccagtattgcgagggggaccaaaaactggaggatcttgatgacgaactcctgg 274
||||| |||| ||| |||||||| ||||| |||||||| |||||||||| ||||||| ||
Sbjct: 571 gccaggcccaatatggcgaggggaaccaagaactggag-atcttgatgatgaactccggg 513
Query: 275 gtcttgtcctggttgtagtgcggctgcttggggggcgtgtacttcaccttggtgggtatc 334
|||||||||||||||||||| || ||||| ||||| ||||||| | | | ||||||
Sbjct: 512 gtcttgtcctggttgtagtgtggttgctttgggggaacgtacttcgtcctcgcgggtatt 453
Query: 335 gtggctgcatcaatctcacccactaagtactcgtccatcattgcacgg-gcagtgctgct 393
|||| || || || || || || | ||||| |||||||| ||||| ||||| ||||
Sbjct: 452 gtggatgtgtcgatgtcgccaacgtaatactcatccatcatcgcacgaagcagtcgtgct 393
Query: 394 gtgccccacatcttcgaaatcatcggtagcatccttggcagtggaagacagcagaacatc 453
|||||| ||||| || ||||| || || || |||||| |||| ||||| |||| |||||
Sbjct: 392 gtgcccgacatcctcaaaatcgtcagtcgcgtccttgccagttgaagatagcaagacatc 333
Query: 454 atcgcctccagggtgatcctccagaaacttggtcacattgtacaccttgccgccgatgac 513
||| ||||| || || ||||| || || || | ||||||||| ||||| ||||||||||
Sbjct: 332 atcacctcctggatggtcctcaaggaatttcgacacattgtatacctttccgccgatgat 273
Query: 514 gagccagcagtcgtccttggtgttgtgcttggccacctcctcgagggtgtacacctt 570
|||||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||
Sbjct: 272 gagccagcagtcgtccttggagttgtgcttggcgacctcctccagggtatacacctt 216
>gb|CF295048.1|CF295048 30DGS--04-M23.g1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--04-M23, mRNA sequence
Length = 558
Score = 180 bits (91), Expect = 7e-043
Identities = 280/343 (81%)
Strand = Plus / Plus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||||||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 216 tccgacttggtgtacatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 275
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 276 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 335
Query: 305 gggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtac 364
||||| ||||||| | | | |||||| |||| || || || || || || | |||
Sbjct: 336 gggggaacgtacttcgtcctcgcgggtattgtggatgtgtcgatgtcgccaacgtaatac 395
Query: 365 tcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagca 424
|| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || || ||
Sbjct: 396 tcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtcgcg 455
Query: 425 tccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttg 484
|||||| |||| ||||| |||| |||||||| ||||| || || ||||| || || ||
Sbjct: 456 tccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaatttc 515
Query: 485 gtcacattgtacaccttgccgccgatgacgagccagcagtcgt 527
| ||||||||| ||||| |||||||||| ||||||||||||||
Sbjct: 516 gacacattgtatacctttccgccgatgatgagccagcagtcgt 558
>gb|CF295639.1|CF295639 30DGS--05-K19.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--05-K19, mRNA sequence
Length = 632
Score = 178 bits (90), Expect = 3e-042
Identities = 281/342 (82%), Gaps = 2/342 (0%)
Strand = Plus / Minus
Query: 230 gcgagggggaccaaaaactggaggatcttgatgacgaactcctgggt-cttgtcctggtt 288
|||||||| ||||| ||||||||||||||||||| ||||||| |||| ||||||||||||
Sbjct: 626 gcgaggggaaccaagaactggaggatcttgatgatgaactccggggttcttgtcctggtt 567
Query: 289 gtagtgcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaat 348
|||||| || ||||| ||||| ||||||| | | |||||||| |||| || || ||
Sbjct: 566 gtagtgtggttgctttgggggaacgtacttcgtcctcgtgggtattgtggatgtgtcgat 507
Query: 349 ctcacccactaagtactcgtccatcattgcacgggcagtgctgctgtgccccacatcttc 408
|| || || | ||||| |||||||| ||||| ||||| |||||||||| ||||| ||
Sbjct: 506 gtcgccaacgtaatactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctc 447
Query: 409 gaaatcatcggtagcatccttggcagtggaagacagcagaacatcatcgcctccagggtg 468
||||| || || || |||||| |||| ||||| |||| |||||||| ||||| || ||
Sbjct: 446 aaaatcgtcagtcgcgtccttgccagttgaagatagcaagacatcatcacctcctggatg 387
Query: 469 atcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtc 528
||||| || || || | ||||||||| ||||| |||||||||| |||| ||| ||||||
Sbjct: 386 gtcctcaaggaatttcgacacattgtatacctttccgccgatgatgagc-agcggtcgtc 328
Query: 529 cttggtgttgtgcttggccacctcctcgagggtgtacacctt 570
||||| |||||||||||| |||||||| ||||| ||||||||
Sbjct: 327 cttggagttgtgcttggcgacctcctccagggtatacacctt 286
>gb|AU029994.1|AU029994 AU029994 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E50445_1A, mRNA sequence
Length = 366
Score = 174 bits (88), Expect = 4e-041
Identities = 135/148 (91%), Gaps = 2/148 (1%)
Strand = Plus / Minus
Query: 416 tcggtagca-tccttggca-gtggaagacagcagaacatcatcgcctccagggtgatcct 473
||||||||| ||||||||| || ||||||| || |||||||| ||||||||||||||||
Sbjct: 245 tcggtagcaatccttggcaagtcgaagacaacaagacatcatcacctccagggtgatcct 186
Query: 474 ccagaaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttgg 533
||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 185 ccaaaaacttggtcacattgtacaccttgccgccgatgatgagccagcaatcgtccttgg 126
Query: 534 tgttgtgcttggccacctcctcgagggt 561
|||||||||||| |||||||| |||||
Sbjct: 125 tgttgtgcttggagacctcctccagggt 98
Score = 50.1 bits (25), Expect = 0.002
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 314 tacttcaccttggtgggtatcgtgg 338
|||||||||||||||||||||||||
Sbjct: 348 tacttcaccttggtgggtatcgtgg 324
>gb|CF311153.1|CF311153 ABF--06-E08.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--06-E08, mRNA sequence
Length = 605
Score = 174 bits (88), Expect = 4e-041
Identities = 266/324 (82%), Gaps = 1/324 (0%)
Strand = Plus / Minus
Query: 248 tggaggatcttgatgacgaactcctggg-tcttgtcctggttgtagtgcggctgcttggg 306
|||||||||||||||| ||||||| ||| ||||||||||||||||||| || ||||| ||
Sbjct: 605 tggaggatcttgatgatgaactccgggggtcttgtcctggttgtagtgtggttgctttgg 546
Query: 307 gggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtactc 366
||| ||||||| | | | |||||| |||| || || || || || || | |||||
Sbjct: 545 gggaacgtacttcgtcctcgcgggtattgtggatgtgtcgatgtcgccaacgtaatactc 486
Query: 367 gtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagcatc 426
|||||||| ||||| ||||| |||||||||| ||||| || ||||| || || || ||
Sbjct: 485 atccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtcgcgtc 426
Query: 427 cttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttggt 486
|||| |||| ||||| |||| |||||||| ||||| || || ||||| || || || |
Sbjct: 425 cttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaatttcga 366
Query: 487 cacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggc 546
||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 365 cacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgcttggc 306
Query: 547 cacctcctcgagggtgtacacctt 570
|||||||| ||||| ||||||||
Sbjct: 305 gacctcctccagggtatacacctt 282
>gb|AU095577.1|AU095577 AU095577 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10408, mRNA sequence
Length = 382
Score = 167 bits (84), Expect = 1e-038
Identities = 152/175 (86%)
Strand = Plus / Minus
Query: 174 actaggcagattccgacttggtgtacatccttacagcgacggccagacccagtattgcga 233
|||| ||||| || ||||||||||| ||||||||||| || |||| |||| ||| || |
Sbjct: 202 actaagcagactctgacttggtgtagatccttacagcaacagccaatcccaatatcgcna 143
Query: 234 gggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagt 293
||| ||||||||||||||||||||||||| |||||| | ||||| |||||||||||||
Sbjct: 142 agggaaccaaaaactggaggatcttgatgatgaactctggtgtcttatcctggttgtagt 83
Query: 294 gcggctgcttggggggcgtgtacttcaccttggtgggtatcgtggctgcatcaat 348
| || ||||| |||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 82 gtggttgcttcgggggcgtgtacttcaccttggtgggtatcgtggttgcgtcaat 28
>gb|CV729037.1|CV729037 FLO--01-K18.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--01-K18,
mRNA sequence
Length = 497
Score = 165 bits (83), Expect = 4e-038
Identities = 278/343 (81%)
Strand = Plus / Plus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || | ||||| |||| ||| |||||||| |||||
Sbjct: 155 tccgacttggtgtagatcctaattgcctcagccaggcccaatatggcgaggggaaccaag 214
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 215 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 274
Query: 305 gggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtac 364
||||| ||||||| | | | |||||| |||| || || || || || || | |||
Sbjct: 275 gggggaacgtacttcgtcctcgcgggtattgtggatgtgtcgatgtcgccaacgtaatac 334
Query: 365 tcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagca 424
|| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || || ||
Sbjct: 335 tcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtcgcg 394
Query: 425 tccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttg 484
|||||| |||| ||||| |||| |||||||| ||||| || || ||||| || || ||
Sbjct: 395 tccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaatttc 454
Query: 485 gtcacattgtacaccttgccgccgatgacgagccagcagtcgt 527
| ||||||||| ||||| |||||||||| ||||||||||||||
Sbjct: 455 gacacattgtatacctttccgccgatgatgagccagcagtcgt 497
>gb|AU095902.1|AU095902 AU095902 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11485, mRNA sequence
Length = 611
Score = 153 bits (77), Expect = 1e-034
Identities = 176/209 (84%)
Strand = Plus / Minus
Query: 362 tactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggta 421
||||| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || ||
Sbjct: 224 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 165
Query: 422 gcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaac 481
|| |||||| |||| ||||| |||| |||||||| ||||| || || ||||| || ||
Sbjct: 164 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 105
Query: 482 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgc 541
|| | ||||||||| ||||| |||||||||| |||||||||||||||||||| |||||||
Sbjct: 104 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 45
Query: 542 ttggccacctcctcgagggtgtacacctt 570
||||| |||||||| ||||| ||||||||
Sbjct: 44 ttggcgacctcctccagggtatacacctt 16
Score = 111 bits (56), Expect = 5e-022
Identities = 103/119 (86%)
Strand = Plus / Minus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| | |||||| |||||
Sbjct: 402 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggngaggggaaccaag 343
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgctt 303
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 342 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgctt 284
>gb|CF318978.1|CF318978 HD--09-F03.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--09-F03, mRNA sequence
Length = 533
Score = 153 bits (77), Expect = 1e-034
Identities = 176/209 (84%)
Strand = Plus / Minus
Query: 362 tactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggta 421
||||| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || ||
Sbjct: 496 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 437
Query: 422 gcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaac 481
|| |||||| |||| ||||| |||| |||||||| ||||| || || ||||| || ||
Sbjct: 436 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 377
Query: 482 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgc 541
|| | ||||||||| ||||| |||||||||| |||||||||||||||||||| |||||||
Sbjct: 376 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 317
Query: 542 ttggccacctcctcgagggtgtacacctt 570
||||| |||||||| ||||| ||||||||
Sbjct: 316 ttggcgacctcctccagggtatacacctt 288
>gb|CF327804.1|CF327804 NACL--02-H02.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--02-H02, mRNA sequence
Length = 557
Score = 153 bits (77), Expect = 1e-034
Identities = 176/209 (84%)
Strand = Plus / Minus
Query: 362 tactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggta 421
||||| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || ||
Sbjct: 530 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 471
Query: 422 gcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaac 481
|| |||||| |||| ||||| |||| |||||||| ||||| || || ||||| || ||
Sbjct: 470 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 411
Query: 482 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgc 541
|| | ||||||||| ||||| |||||||||| |||||||||||||||||||| |||||||
Sbjct: 410 tttgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 351
Query: 542 ttggccacctcctcgagggtgtacacctt 570
||||| |||||||| ||||| ||||||||
Sbjct: 350 ttggcgacctcctccagggtatacacctt 322
>gb|CF331817.1|CF331817 NACL--08-B10.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--08-B10, mRNA sequence
Length = 551
Score = 153 bits (77), Expect = 1e-034
Identities = 176/209 (84%)
Strand = Plus / Minus
Query: 362 tactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggta 421
||||| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || ||
Sbjct: 492 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 433
Query: 422 gcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaac 481
|| |||||| |||| ||||| |||| |||||||| ||||| || || ||||| || ||
Sbjct: 432 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 373
Query: 482 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgc 541
|| | ||||||||| ||||| |||||||||| |||||||||||||||||||| |||||||
Sbjct: 372 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 313
Query: 542 ttggccacctcctcgagggtgtacacctt 570
||||| |||||||| ||||| ||||||||
Sbjct: 312 ttggcgacctcctccagggtatacacctt 284
>gb|CV729036.1|CV729036 FLO--01-K18.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--01-K18,
mRNA sequence
Length = 497
Score = 153 bits (77), Expect = 1e-034
Identities = 176/209 (84%)
Strand = Plus / Minus
Query: 362 tactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggta 421
||||| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || ||
Sbjct: 486 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 427
Query: 422 gcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaac 481
|| |||||| |||| ||||| |||| |||||||| ||||| || || ||||| || ||
Sbjct: 426 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 367
Query: 482 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgc 541
|| | ||||||||| ||||| |||||||||| |||||||||||||||||||| |||||||
Sbjct: 366 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 307
Query: 542 ttggccacctcctcgagggtgtacacctt 570
||||| |||||||| ||||| ||||||||
Sbjct: 306 ttggcgacctcctccagggtatacacctt 278
>gb|CF297391.1|CF297391 30DGS--08-D18.g1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--08-D18, mRNA sequence
Length = 540
Score = 151 bits (76), Expect = 6e-034
Identities = 265/328 (80%)
Strand = Plus / Plus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 211 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 270
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 271 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 330
Query: 305 gggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtac 364
||||| ||||||| | | | |||||| |||| || || || || || || | |||
Sbjct: 331 gggggaacgtacttcgtcctcgcgggtattgtggatgtgtcgatgtcgccaacgtaatac 390
Query: 365 tcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagca 424
|| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || || ||
Sbjct: 391 tcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtcgcg 450
Query: 425 tccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttg 484
|||||| |||| ||||| |||| |||||||| ||||| || || ||||| || || ||
Sbjct: 451 tccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaatttc 510
Query: 485 gtcacattgtacaccttgccgccgatga 512
| ||||||||| ||||| ||||||||||
Sbjct: 511 gacacattgtatacctttccgccgatga 538
>gb|CV730074.1|CV730074 FLO--03-G23.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--03-G23,
mRNA sequence
Length = 488
Score = 149 bits (75), Expect = 2e-033
Identities = 171/203 (84%)
Strand = Plus / Minus
Query: 368 tccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagcatcc 427
|||||||| ||||| ||||| |||||||||| ||||| || ||||| || || || |||
Sbjct: 487 tccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtcgcgtcc 428
Query: 428 ttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttggtc 487
||| |||| ||||| |||| |||||||| ||||| || || ||||| || || || | |
Sbjct: 427 ttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaatttcgac 368
Query: 488 acattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggcc 547
|||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 367 acattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgcttggcg 308
Query: 548 acctcctcgagggtgtacacctt 570
|||||||| ||||| ||||||||
Sbjct: 307 acctcctccagggtatacacctt 285
>gb|C99605.1|C99605 C99605 Rice panicle (longer than 10cm) Oryza sativa (japonica
cultivar-group) cDNA clone E20763_1A, mRNA sequence
Length = 462
Score = 147 bits (74), Expect = 9e-033
Identities = 128/144 (88%), Gaps = 2/144 (1%)
Strand = Plus / Minus
Query: 420 tagcatccttggca-gtggaagacagcagaacatcatcgcctcc-agggtgatcctccag 477
|||||||||||||| || ||||||| || |||||||| ||||| ||| ||||||||||
Sbjct: 343 tagcatccttggcaagtcgaagacaacaagacatcatcacctcccaggttgatcctccaa 284
Query: 478 aaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgtt 537
|||| |||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 283 aaacntggtcacantgtacaccttgccgccgatgatgagccagcaatcgtccttggtgtt 224
Query: 538 gtgcttggccacctcctcgagggt 561
|||||||| |||||||| |||||
Sbjct: 223 gtgcttggagacctcctccagggt 200
>gb|CA999251.1|CA999251 S234P_C06 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 359
Score = 147 bits (74), Expect = 9e-033
Identities = 175/209 (83%)
Strand = Plus / Minus
Query: 362 tactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggta 421
||||| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || ||
Sbjct: 353 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 294
Query: 422 gcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaac 481
|| |||||| |||| ||||| |||| |||||||| ||||| || || ||||| || ||
Sbjct: 293 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 234
Query: 482 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgc 541
|| | ||||||||| ||||| |||||||||| ||||||||||||||||| || |||||||
Sbjct: 233 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtcctnggagttgtgc 174
Query: 542 ttggccacctcctcgagggtgtacacctt 570
||||| |||||||| ||||| ||||||||
Sbjct: 173 ttggcgacctcctccagggtatacacctt 145
>gb|CF279862.1|CF279862 14ETL--06-F04.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--06-F04, mRNA sequence
Length = 563
Score = 145 bits (73), Expect = 4e-032
Identities = 175/209 (83%)
Strand = Plus / Minus
Query: 362 tactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggta 421
||||| |||||||| ||||| ||||| ||| |||||| ||||| || ||||| || ||
Sbjct: 526 tactcatccatcatcgcacgagcagtcgtgccgtgcccgacatcctcaaaatcgtcagtc 467
Query: 422 gcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaac 481
|| |||||| |||| ||||| |||| |||||||| ||||| || || ||||| || ||
Sbjct: 466 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 407
Query: 482 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgc 541
|| | ||||||||| ||||| |||||||||| |||||||||||||||||||| |||||||
Sbjct: 406 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 347
Query: 542 ttggccacctcctcgagggtgtacacctt 570
||||| |||||||| ||||| ||||||||
Sbjct: 346 ttggcgacctcctccagggtatacacctt 318
>gb|CF315806.1|CF315806 HD--04-N19.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--04-N19, mRNA sequence
Length = 532
Score = 139 bits (70), Expect = 2e-030
Identities = 163/194 (84%)
Strand = Plus / Minus
Query: 362 tactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggta 421
||||| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || ||
Sbjct: 496 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 437
Query: 422 gcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaac 481
|| |||||| |||| ||||| |||| |||||||| ||||| || || ||||| || ||
Sbjct: 436 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 377
Query: 482 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgc 541
|| | ||||||||| ||||| |||||||||| |||||||||||||||||||| |||||||
Sbjct: 376 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 317
Query: 542 ttggccacctcctc 555
||||| ||||||||
Sbjct: 316 ttggcgacctcctc 303
>gb|AU065333.1|AU065333 AU065333 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E61850_1A, mRNA sequence
Length = 591
Score = 137 bits (69), Expect = 9e-030
Identities = 153/181 (84%)
Strand = Plus / Minus
Query: 390 tgctgtgccccacatcttcgaaatcatcggtagcatccttggcagtggaagacagcagaa 449
|||||||||| ||||| || ||||| || || || |||||| |||| ||||| |||| |
Sbjct: 329 tgctgtgcccgacatcctcaaaatcgtcagtcgcgtccttgccagttgaagatagcaaga 270
Query: 450 catcatcgcctccagggtgatcctccagaaacttggtcacattgtacaccttgccgccga 509
||||||| ||||| || || ||||| || || || | ||||||||| ||||| |||||||
Sbjct: 269 catcatcacctcctggatggtcctcaaggaatttcgacacattgtatacctttccgccga 210
Query: 510 tgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcgagggtgtacacct 569
||| |||||||||||||||||||| |||||||||||| |||||||| ||||| |||||||
Sbjct: 209 tgatgagccagcagtcgtccttggagttgtgcttggcgacctcctccagggtatacacct 150
Query: 570 t 570
|
Sbjct: 149 t 149
Score = 95.6 bits (48), Expect = 3e-017
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 231 cgagggggaccaaaaactggaggatcttgatgacgaactcctgggtcttgtcctggttgt 290
||||||| ||||| ||||||||||||||||||| ||||||| |||||||||||||||| |
Sbjct: 497 cgaggggaaccaagaactggaggatcttgatgatgaactccggggtcttgtcctggttnt 438
Query: 291 agtgcggctgcttgggggg 309
|||| || ||||| |||||
Sbjct: 437 agtgtggttgctttggggg 419
>gb|C19903.1|C19903 C19903 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E11192_2A, mRNA sequence
Length = 442
Score = 131 bits (66), Expect = 5e-028
Identities = 152/181 (83%)
Strand = Plus / Minus
Query: 390 tgctgtgccccacatcttcgaaatcatcggtagcatccttggcagtggaagacagcagaa 449
|||||||||| ||||| | ||||| || || || |||||| |||| ||||| |||| |
Sbjct: 336 tgctgtgcccgacatcctnaaaatcgtcagtcgcgtccttgccagttgaagatagcaaga 277
Query: 450 catcatcgcctccagggtgatcctccagaaacttggtcacattgtacaccttgccgccga 509
||||||| ||||| || || ||||| || || || | ||||||||| ||||| |||||||
Sbjct: 276 catcatcacctcctggatggtcctcaaggaatttcgacacattgtatacctttccgccga 217
Query: 510 tgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcgagggtgtacacct 569
||| |||||||||||||||||||| |||||||||||| |||||||| ||||| |||||||
Sbjct: 216 tgatgagccagcagtcgtccttggagttgtgcttggcgacctcctccagggtatacacct 157
Query: 570 t 570
|
Sbjct: 156 t 156
>gb|CF321375.1|CF321375 HD--12-J19.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--12-J19, mRNA sequence
Length = 568
Score = 131 bits (66), Expect = 5e-028
Identities = 225/278 (80%)
Strand = Plus / Plus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 286 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 345
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 346 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 405
Query: 305 gggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtac 364
||||| ||||||| | | | |||||| |||| || || || || || || | |||
Sbjct: 406 gggggaacgtacttcgtcctcgcgggtattgtggatgtgtcgatgtcgccaacgtaatac 465
Query: 365 tcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagca 424
|| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || || ||
Sbjct: 466 tcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtcgcg 525
Query: 425 tccttggcagtggaagacagcagaacatcatcgcctcc 462
|||||| |||| ||||| |||| |||||||| |||||
Sbjct: 526 tccttgccagttgaagatagcaagacatcatcacctcc 563
>gb|D46673.1|D46673 RICS11485A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 341
Score = 127 bits (64), Expect = 8e-027
Identities = 172/209 (82%)
Strand = Plus / Minus
Query: 362 tactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggta 421
||||| |||||||| ||||| | ||| |||||||||| ||||| | ||||| | ||
Sbjct: 290 tactcatccatcatcgcacgagnagtcgtgctgtgcccgacatcctnaaaatcgtaagtc 231
Query: 422 gcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaac 481
|| |||||| ||| ||||| |||| |||||||| ||||| || || ||||| || ||
Sbjct: 230 gcgtccttgcnagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 171
Query: 482 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgc 541
|| | ||||||||| ||||| |||||||||| |||||||||||||||||||| |||||||
Sbjct: 170 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgc 111
Query: 542 ttggccacctcctcgagggtgtacacctt 570
||||| |||||||| ||||| ||||||||
Sbjct: 110 ttggcgacctcctccagggtatacacctt 82
>gb|CF317599.1|CF317599 HD--07-F17.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-F17, mRNA sequence
Length = 532
Score = 127 bits (64), Expect = 8e-027
Identities = 176/211 (83%), Gaps = 2/211 (0%)
Strand = Plus / Minus
Query: 362 tactcgtccatcattgcacgggcagtgctgctgtgccccacatc-ttcgaaatcatcggt 420
||||| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || ||
Sbjct: 496 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatccntcaaaatcgtcagt 437
Query: 421 agcatccttggcagtggaagacagcagaacatcat-cgcctccagggtgatcctccagaa 479
|| |||||| |||| ||||| |||| ||||||| | ||||| || || ||||| || |
Sbjct: 436 cgcgtccttgccagttgaagatagcaagacatcatncacctcctggatggtcctcaagga 377
Query: 480 acttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgt 539
| || | ||||||||| ||||| |||||||||| |||||||||||||||||||| |||||
Sbjct: 376 atttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgt 317
Query: 540 gcttggccacctcctcgagggtgtacacctt 570
||||||| |||||||| ||||| ||||||||
Sbjct: 316 gcttggcgacctcctccagggtatacacctt 286
>gb|CF327805.1|CF327805 NACL--02-H02.g1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--02-H02, mRNA sequence
Length = 555
Score = 127 bits (64), Expect = 8e-027
Identities = 220/272 (80%)
Strand = Plus / Plus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 283 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 342
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 343 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 402
Query: 305 gggggcgtgtacttcaccttggtgggtatcgtggctgcatcaatctcacccactaagtac 364
||||| ||||||| | | | |||||| |||| || || || || || || | |||
Sbjct: 403 gggggaacgtacttcgtcctcgcgggtattgtggatgtgtcgatgtcgccaacgtaatac 462
Query: 365 tcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggtagca 424
|| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || || ||
Sbjct: 463 tcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtcgcg 522
Query: 425 tccttggcagtggaagacagcagaacatcatc 456
|||||| |||| ||||| |||| ||||||||
Sbjct: 523 tccttgccagttgaagatagcaagacatcatc 554
>gb|D48014.1|D48014 RICS13924A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 380
Score = 123 bits (62), Expect = 1e-025
Identities = 125/146 (85%)
Strand = Plus / Minus
Query: 425 tccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttg 484
|||||| |||| ||||| |||| |||||||| ||||| || || ||||| || || ||
Sbjct: 373 tccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaatttc 314
Query: 485 gtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttg 544
| ||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 313 gacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgcttg 254
Query: 545 gccacctcctcgagggtgtacacctt 570
|| |||||||| ||||| ||||||||
Sbjct: 253 gcgacctcctccagggtatacacctt 228
>gb|D15917.1|D15917 RICC1525A Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C1525A, mRNA sequence
Length = 350
Score = 123 bits (62), Expect = 1e-025
Identities = 125/146 (85%)
Strand = Plus / Minus
Query: 425 tccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttg 484
|||||| |||| ||||| |||| |||||||| ||||| || || ||||| || || ||
Sbjct: 299 tccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaatttc 240
Query: 485 gtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttg 544
| ||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 239 gacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgcttg 180
Query: 545 gccacctcctcgagggtgtacacctt 570
|| |||||||| ||||| ||||||||
Sbjct: 179 gcgacctcctccagggtatacacctt 154
>gb|CF295459.1|CF295459 30DGS--05-G19.g1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--05-G19, mRNA sequence
Length = 457
Score = 123 bits (62), Expect = 1e-025
Identities = 125/146 (85%)
Strand = Plus / Minus
Query: 425 tccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttg 484
|||||| |||| ||||| |||| |||||||| ||||| || || ||||| || || ||
Sbjct: 444 tccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaatttc 385
Query: 485 gtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttg 544
| ||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 384 gacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgcttg 325
Query: 545 gccacctcctcgagggtgtacacctt 570
|| |||||||| ||||| ||||||||
Sbjct: 324 gcgacctcctccagggtatacacctt 299
>gb|C20362.1|C20362 C20362 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E11906_1A, mRNA sequence
Length = 395
Score = 121 bits (61), Expect = 5e-025
Identities = 173/210 (82%), Gaps = 1/210 (0%)
Strand = Plus / Minus
Query: 362 tactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatca-tcggt 420
||||| |||||||| ||||| ||||| | |||||||| ||||| || ||| | || ||
Sbjct: 365 tactcatccatcatcgcacgagcagtcgtnctgtgcccgacatcctcaaaanccgtcagt 306
Query: 421 agcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaa 480
|| |||||| |||| ||||| |||| |||||||| ||||| || || |||| || ||
Sbjct: 305 cgcgtccttgccagttgaagatagcaagacatcatcacctcctggatggncctcaaggaa 246
Query: 481 cttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtg 540
|| | ||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||
Sbjct: 245 tttcgacacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtg 186
Query: 541 cttggccacctcctcgagggtgtacacctt 570
|||||| |||||||| ||||| ||||||||
Sbjct: 185 cttggcgacctcctccagggtatacacctt 156
>gb|AU092805.1|AU092805 AU092805 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C53733, mRNA sequence
Length = 491
Score = 121 bits (61), Expect = 5e-025
Identities = 109/125 (87%)
Strand = Plus / Minus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 336 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 277
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 276 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 217
Query: 305 ggggg 309
|||||
Sbjct: 216 ggggg 212
>gb|AU094584.1|AU094584 AU094584 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E11906, mRNA sequence
Length = 458
Score = 121 bits (61), Expect = 5e-025
Identities = 109/125 (87%)
Strand = Plus / Minus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 209 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 150
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 149 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 90
Query: 305 ggggg 309
|||||
Sbjct: 89 ggggg 85
>gb|CF295640.1|CF295640 30DGS--05-K19.g1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--05-K19, mRNA sequence
Length = 460
Score = 121 bits (61), Expect = 5e-025
Identities = 109/125 (87%)
Strand = Plus / Plus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 213 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 272
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 273 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 332
Query: 305 ggggg 309
|||||
Sbjct: 333 ggggg 337
>gb|CF318818.1|CF318818 HD--09-B14.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--09-B14, mRNA sequence
Length = 540
Score = 121 bits (61), Expect = 5e-025
Identities = 109/125 (87%)
Strand = Plus / Plus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 196 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 255
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 256 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 315
Query: 305 ggggg 309
|||||
Sbjct: 316 ggggg 320
Score = 99.6 bits (50), Expect = 2e-018
Identities = 137/166 (82%)
Strand = Plus / Plus
Query: 362 tactcgtccatcattgcacgggcagtgctgctgtgccccacatcttcgaaatcatcggta 421
||||| |||||||| ||||| ||||| |||||||||| ||||| || ||||| || ||
Sbjct: 375 tactcatccatcatcgcacgagcagtcgtgctgtgcccgacatcctcaaaatcgtcagtc 434
Query: 422 gcatccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaac 481
|| |||||| |||| ||||| |||| |||||||| ||||| || || ||||| || ||
Sbjct: 435 gcgtccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaat 494
Query: 482 ttggtcacattgtacaccttgccgccgatgacgagccagcagtcgt 527
|| | ||||||||| ||||| |||||||||| ||||||||||||||
Sbjct: 495 ttcgacacattgtatacctttccgccgatgatgagccagcagtcgt 540
>gb|CF318977.1|CF318977 HD--09-F03.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--09-F03, mRNA sequence
Length = 437
Score = 121 bits (61), Expect = 5e-025
Identities = 109/125 (87%)
Strand = Plus / Plus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 209 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 268
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 269 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 328
Query: 305 ggggg 309
|||||
Sbjct: 329 ggggg 333
>gb|CF331816.1|CF331816 NACL--08-B10.b1 Rice callus plasmid cDNA library (NACL) Oryza
sativa (japonica cultivar-group) cDNA clone
NACL--08-B10, mRNA sequence
Length = 534
Score = 121 bits (61), Expect = 5e-025
Identities = 109/125 (87%)
Strand = Plus / Plus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 203 tccgacttggtgtagatcctaattgcaacagccaggcccaatatagcgaggggaaccaag 262
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 263 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 322
Query: 305 ggggg 309
|||||
Sbjct: 323 ggggg 327
>gb|CV730359.1|CV730359 FLO--03-N20.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--03-N20,
mRNA sequence
Length = 479
Score = 121 bits (61), Expect = 5e-025
Identities = 109/125 (87%)
Strand = Plus / Plus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 254 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 313
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 314 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 373
Query: 305 ggggg 309
|||||
Sbjct: 374 ggggg 378
>gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0068N01,
complete sequence
Length = 152233
Score = 121 bits (61), Expect = 5e-025
Identities = 109/125 (87%)
Strand = Plus / Minus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 124301 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 124242
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 124241 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 124182
Query: 305 ggggg 309
|||||
Sbjct: 124181 ggggg 124177
Score = 99.6 bits (50), Expect = 2e-018
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcg 556
||||| |||||||||| |||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 122920 acctttccgccgatgatgagccagcagtcgtccttggagttgtgcttggcgacctcctcc 122861
Query: 557 agggtgtacacctt 570
||||| ||||||||
Sbjct: 122860 agggtatacacctt 122847
>gb|AACV01010748.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg010748, whole
genome shotgun sequence
Length = 40612
Score = 121 bits (61), Expect = 5e-025
Identities = 109/125 (87%)
Strand = Plus / Minus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 6074 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 6015
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 6014 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 5955
Query: 305 ggggg 309
|||||
Sbjct: 5954 ggggg 5950
Score = 99.6 bits (50), Expect = 2e-018
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcg 556
||||| |||||||||| |||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 4693 acctttccgccgatgatgagccagcagtcgtccttggagttgtgcttggcgacctcctcc 4634
Query: 557 agggtgtacacctt 570
||||| ||||||||
Sbjct: 4633 agggtatacacctt 4620
>ref|NT_079870.2| Oryza sativa (japonica cultivar-group)
Length = 867822
Score = 121 bits (61), Expect = 5e-025
Identities = 109/125 (87%)
Strand = Plus / Minus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 462654 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 462595
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 462594 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 462535
Query: 305 ggggg 309
|||||
Sbjct: 462534 ggggg 462530
Score = 99.6 bits (50), Expect = 2e-018
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcg 556
||||| |||||||||| |||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 461273 acctttccgccgatgatgagccagcagtcgtccttggagttgtgcttggcgacctcctcc 461214
Query: 557 agggtgtacacctt 570
||||| ||||||||
Sbjct: 461213 agggtatacacctt 461200
>gb|CH401191.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000028
genomic scaffold, whole genome shotgun sequence
Length = 7678539
Score = 121 bits (61), Expect = 5e-025
Identities = 109/125 (87%)
Strand = Plus / Minus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 455107 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 455048
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 455047 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 454988
Query: 305 ggggg 309
|||||
Sbjct: 454987 ggggg 454983
Score = 99.6 bits (50), Expect = 2e-018
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcg 556
||||| |||||||||| |||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 453726 acctttccgccgatgatgagccagcagtcgtccttggagttgtgcttggcgacctcctcc 453667
Query: 557 agggtgtacacctt 570
||||| ||||||||
Sbjct: 453666 agggtatacacctt 453653
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 121 bits (61), Expect = 5e-025
Identities = 109/125 (87%)
Strand = Plus / Minus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 455107 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 455048
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 455047 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 454988
Query: 305 ggggg 309
|||||
Sbjct: 454987 ggggg 454983
Score = 99.6 bits (50), Expect = 2e-018
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcg 556
||||| |||||||||| |||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 453726 acctttccgccgatgatgagccagcagtcgtccttggagttgtgcttggcgacctcctcc 453667
Query: 557 agggtgtacacctt 570
||||| ||||||||
Sbjct: 453666 agggtatacacctt 453653
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 612 ggaggaggcggaggcgagg 630
|||||||||||||||||||
Sbjct: 23327421 ggaggaggcggaggcgagg 23327439
Score = 38.2 bits (19), Expect = 6.0
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcgagga 631
|||||||||||||| ||||||||
Sbjct: 15928218 ggtggaggaggcggcggcgagga 15928196
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 645 gctgttgctgcttgctgtg 663
|||||||||||||||||||
Sbjct: 14512985 gctgttgctgcttgctgtg 14512967
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
complete sequence
Length = 29737217
Score = 121 bits (61), Expect = 5e-025
Identities = 109/125 (87%)
Strand = Plus / Minus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 462654 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 462595
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 462594 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 462535
Query: 305 ggggg 309
|||||
Sbjct: 462534 ggggg 462530
Score = 99.6 bits (50), Expect = 2e-018
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcg 556
||||| |||||||||| |||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 461273 acctttccgccgatgatgagccagcagtcgtccttggagttgtgcttggcgacctcctcc 461214
Query: 557 agggtgtacacctt 570
||||| ||||||||
Sbjct: 461213 agggtatacacctt 461200
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 612 ggaggaggcggaggcgagg 630
|||||||||||||||||||
Sbjct: 23639795 ggaggaggcggaggcgagg 23639813
Score = 38.2 bits (19), Expect = 6.0
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcgagga 631
|||||||||||||| ||||||||
Sbjct: 16376613 ggtggaggaggcggcggcgagga 16376591
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 645 gctgttgctgcttgctgtg 663
|||||||||||||||||||
Sbjct: 14769851 gctgttgctgcttgctgtg 14769833
>gb|C93424.1|C93424 C93424 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C10308_1A, mRNA sequence
Length = 416
Score = 119 bits (60), Expect = 2e-024
Identities = 123/144 (85%)
Strand = Plus / Minus
Query: 427 cttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttggt 486
|||| |||| ||||| |||| |||||||| ||||| || || ||||| || || || |
Sbjct: 395 cttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaatttcga 336
Query: 487 cacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggc 546
||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 335 cacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgcttggc 276
Query: 547 cacctcctcgagggtgtacacctt 570
|||||||| ||||| ||||||||
Sbjct: 275 gacctcctccagggtatacacctt 252
>gb|CF337223.1|CF337223 JMT--07-J08.g1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--07-J08, mRNA sequence
Length = 492
Score = 119 bits (60), Expect = 2e-024
Identities = 108/124 (87%)
Strand = Plus / Plus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 248 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 307
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 308 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 367
Query: 305 gggg 308
||||
Sbjct: 368 gggg 371
>gb|CA999733.1|CA999733 S234I_E03 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 284
Score = 117 bits (59), Expect = 8e-024
Identities = 119/139 (85%)
Strand = Plus / Minus
Query: 432 cagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttggtcacat 491
|||| ||||| |||| |||||||| ||||| || || ||||| || || || | |||||
Sbjct: 283 cagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaatttcgacacat 224
Query: 492 tgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacct 551
|||| ||||| |||||||||| |||||||||||||||||||| |||||||||||| ||||
Sbjct: 223 tgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgcttggcgacct 164
Query: 552 cctcgagggtgtacacctt 570
|||| ||||| ||||||||
Sbjct: 163 cctccagggtatacacctt 145
>gb|C27590.1|C27590 C27590 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C52309_1A, mRNA sequence
Length = 246
Score = 115 bits (58), Expect = 3e-023
Identities = 77/84 (91%)
Strand = Plus / Minus
Query: 478 aaacttggtcacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgtt 537
||||||||| |||||||| |||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 244 aaacttggtnacattgtanaccttgccgccgatgatgagccagcaatcgtccttggtgtt 185
Query: 538 gtgcttggccacctcctcgagggt 561
|||||||| |||||||| |||||
Sbjct: 184 gtgcttggagacctcctccagggt 161
>gb|C27755.1|C27755 C27755 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C52787_1A, mRNA sequence
Length = 407
Score = 111 bits (56), Expect = 5e-022
Identities = 77/84 (91%)
Strand = Plus / Minus
Query: 487 cacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggc 546
||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 233 cacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgcttggc 174
Query: 547 cacctcctcgagggtgtacacctt 570
|||||||| ||||| ||||||||
Sbjct: 173 gacctcctccagggtatacacctt 150
>gb|C28027.1|C28027 C28027 Rice callus cDNA Oryza sativa (japonica cultivar-group) cDNA
clone C53733_1A, mRNA sequence
Length = 235
Score = 111 bits (56), Expect = 5e-022
Identities = 77/84 (91%)
Strand = Plus / Minus
Query: 487 cacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggc 546
||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 232 cacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgcttggc 173
Query: 547 cacctcctcgagggtgtacacctt 570
|||||||| ||||| ||||||||
Sbjct: 172 gacctcctccagggtatacacctt 149
>gb|AU223144.1|AU223144 AU223144 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S4011, mRNA sequence
Length = 402
Score = 111 bits (56), Expect = 5e-022
Identities = 107/125 (85%)
Strand = Plus / Minus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 188 tccgacttggtgtanatcctaattgcaacagccaggcccaatatggcgaggggaaccaan 129
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||| ||||||||||||||| | || |||||
Sbjct: 128 aactggaggatcttgatgatgaactccggggtnttgtcctggttgtaggggggttgcttt 69
Query: 305 ggggg 309
|||||
Sbjct: 68 ggggg 64
>gb|CA755402.1|CA755402 BR030019000_PLATE_H09_72_079.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030019000_PLATE_H09_72_079.ab1 similar to (AC079022)
cytochrome B5 [Oryza sativa], mRNA sequence
Length = 255
Score = 111 bits (56), Expect = 5e-022
Identities = 77/84 (91%)
Strand = Plus / Minus
Query: 487 cacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggc 546
||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 230 cacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgcttggc 171
Query: 547 cacctcctcgagggtgtacacctt 570
|||||||| ||||| ||||||||
Sbjct: 170 gacctcctccagggtatacacctt 147
>gb|CF337061.1|CF337061 JMT--07-F17.g1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--07-F17, mRNA sequence
Length = 531
Score = 111 bits (56), Expect = 5e-022
Identities = 107/124 (86%)
Strand = Plus / Plus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||| ||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 248 tccgacttggggtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 307
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggttgtagtgcggctgcttg 304
||||||||||||||||||| ||||||| |||||||||||||||||||||| || |||||
Sbjct: 308 aactggaggatcttgatgatgaactccggggtcttgtcctggttgtagtgtggttgcttt 367
Query: 305 gggg 308
||||
Sbjct: 368 gggg 371
>gb|AU181087.1|AU181087 AU181087 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11355, mRNA sequence
Length = 430
Score = 109 bits (55), Expect = 2e-021
Identities = 125/147 (85%), Gaps = 1/147 (0%)
Strand = Plus / Minus
Query: 425 tccttggcagtggaagacagcagaacatcatcgcctccagggtgatcctccagaaacttg 484
|||||| |||| ||||| |||| |||||||| ||||| || || ||||| || || ||
Sbjct: 381 tccttgccagttgaagatagcaagacatcatcacctcctggatggtcctcaaggaatttc 322
Query: 485 gtcacattgtacaccttgccgcc-gatgacgagccagcagtcgtccttggtgttgtgctt 543
| ||||||||| ||||| ||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 321 gacacattgtatacctttccgccngatgatgagccagcagtcgtccttggagttgtgctt 262
Query: 544 ggccacctcctcgagggtgtacacctt 570
||| |||||||| ||||| ||||||||
Sbjct: 261 ggcgacctcctccagggtatacacctt 235
>gb|D46641.1|D46641 RICS11434A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 333
Score = 103 bits (52), Expect = 1e-019
Identities = 104/122 (85%)
Strand = Plus / Minus
Query: 449 acatcatcgcctccagggtgatcctccagaaacttggtcacattgtacaccttgccgccg 508
|||||||| ||||| || || ||||| || || || | ||||||||| ||||| ||||||
Sbjct: 257 acatcatcacctcctggatggtcctcaaggaatttcgacacattgtatacctttccgccg 198
Query: 509 atgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcgagggtgtacacc 568
|||| |||| || |||||||||||| |||||||||||| |||||||| ||||| ||||||
Sbjct: 197 atgatgagcnagnagtcgtccttggagttgtgcttggcgacctcctccagggtatacacc 138
Query: 569 tt 570
||
Sbjct: 137 tt 136
>gb|CF295458.1|CF295458 30DGS--05-G19.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--05-G19, mRNA sequence
Length = 386
Score = 103 bits (52), Expect = 1e-019
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 283 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 342
Query: 245 aactggaggatcttgatgacgaactcctgggtcttgtcctggtt 288
||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 343 aactggaggatcttgatgatgaactccggggtcttgtcctggtt 386
>gb|AU164945.1|AU164945 AU164945 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E61850, mRNA sequence
Length = 461
Score = 97.6 bits (49), Expect = 8e-018
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 215 gccagacccagtattgcgagggggaccaaaaactggaggatcttgatgacgaactcctgg 274
||||| |||| ||| |||||||| ||||| ||||||||| ||||||||| ||||||| ||
Sbjct: 80 gccaggcccaatatggcgaggggaaccaagaactggaggntcttgatgatgaactccggg 21
Query: 275 gtcttgtcctggttgtagtg 294
||||||||||||||||||||
Sbjct: 20 gtcttgtcctggttgtagtg 1
>gb|CF317768.1|CF317768 HD--07-J08.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--07-J08, mRNA sequence
Length = 447
Score = 97.6 bits (49), Expect = 8e-018
Identities = 77/85 (90%), Gaps = 1/85 (1%)
Strand = Plus / Minus
Query: 487 cacattgtacaccttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggc 546
||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 370 cacattgtatacctttccgccgatgatgagccagcagtcgtccttggagttgtgcttggc 311
Query: 547 cacctcct-cgagggtgtacacctt 570
||||||| | ||||| ||||||||
Sbjct: 310 gacctcctnccagggtatacacctt 286
>gb|AU032791.1|AU032791 AU032791 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S14158_6Z, mRNA sequence
Length = 492
Score = 95.6 bits (48), Expect = 3e-017
Identities = 107/126 (84%), Gaps = 1/126 (0%)
Strand = Plus / Minus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | || || ||||| |||| ||| | |||||| |||||
Sbjct: 208 tccgacttggtgtagatcctaattgcaacagccaggcccaatatggngaggggaaccaag 149
Query: 245 aactggaggatcttg-atgacgaactcctgggtcttgtcctggttgtagtgcggctgctt 303
||||||||||||||| |||| ||||||| ||| |||||||||||||||||| || |||||
Sbjct: 148 aactggaggatcttggatgatgaactccggggncttgtcctggttgtagtgtgggtgctt 89
Query: 304 gggggg 309
|||||
Sbjct: 88 tggggg 83
>gb|CF282411.1|CF282411 14ETL--09-O18.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--09-O18, mRNA sequence
Length = 350
Score = 95.6 bits (48), Expect = 3e-017
Identities = 84/96 (87%)
Strand = Plus / Plus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
|||||||||||||| ||||| | ||||| |||| |||| ||| |||||||| ||||||
Sbjct: 255 tccgacttggtgtaaatcctaatggcgacagccacgcccaatatggcgaggggaaccaaa 314
Query: 245 aactggaggatcttgatgacgaactcctgggtcttg 280
||||||||||||||||||| ||||||| ||||||||
Sbjct: 315 aactggaggatcttgatgaagaactccggggtcttg 350
>gb|AU066098.1|AU066098 AU066098 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S3734_1A, mRNA sequence
Length = 368
Score = 87.7 bits (44), Expect = 7e-015
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcg 556
||||| |||||||||| ||||||||||||| ||||| |||||||||||| ||||||||
Sbjct: 337 accttnccgccgatgatgagccagcagtcggccttgnagttgtgcttggcgacctcctcc 278
Query: 557 agggtgtacacctt 570
||||| ||||||||
Sbjct: 277 agggtatacacctt 264
>gb|CA999387.1|CA999387 S234G_H11 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 352
Score = 83.8 bits (42), Expect = 1e-013
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtccttggtgttgtgcttggccacctcctcg 556
||||| |||||||||| |||||||||||||||||||| |||||||||| | ||||||||
Sbjct: 350 acctttccgccgatgatgagccagcagtcgtccttggagttgtgcttgccgacctcctcc 291
Query: 557 agggtgtacacctt 570
||||| | ||||||
Sbjct: 290 agggtatgcacctt 277
>gb|AU181088.1|AU181088 AU181088 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S11355, mRNA sequence
Length = 411
Score = 75.8 bits (38), Expect = 3e-011
Identities = 65/74 (87%)
Strand = Plus / Minus
Query: 221 cccagtattgcgagggggaccaaaaactggaggatcttgatgacgaactcctgggtcttg 280
|||| ||| |||||||| ||||| ||||| || ||||||||| ||||||| ||||||||
Sbjct: 117 cccaatatggcgaggggaaccaaggactggggggtcttgatgatgaactccggggtcttg 58
Query: 281 tcctggttgtagtg 294
||||||||||||||
Sbjct: 57 tcctggttgtagtg 44
>gb|AU097310.1|AU097310 AU097310 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S3734, mRNA sequence
Length = 316
Score = 67.9 bits (34), Expect = 7e-009
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 215 gccagacccagtattgcgagggggaccaaaaactggaggatcttgatgacgaactcctgg 274
||||| |||| ||| |||| ||| ||||| |||||| |||||||||||| ||||||| ||
Sbjct: 72 gccaggcccaatatggcgaagggnaccaagaactgggggatcttgatgatgaactccggg 13
Query: 275 gtcttgtcctgg 286
| ||||||||||
Sbjct: 12 gncttgtcctgg 1
>gb|AU092045.1|AU092045 AU092045 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C10308, mRNA sequence
Length = 384
Score = 65.9 bits (33), Expect = 3e-008
Identities = 73/87 (83%)
Strand = Plus / Minus
Query: 185 tccgacttggtgtacatccttacagcgacggccagacccagtattgcgagggggaccaaa 244
||||| |||||||| ||||| | || || ||||| |||| ||| |||||||| |||||
Sbjct: 91 tccganttggtgtagatcctaattgcaacagccaggcccaatatggcgaggggaaccaag 32
Query: 245 aactggaggatcttgatgacgaactcc 271
|||||||||||||||| || |||||||
Sbjct: 31 aactggaggatcttgangatgaactcc 5
>gb|CV723273.1|CV723273 root--03-A19.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone
root--03-A19, mRNA sequence
Length = 217
Score = 56.0 bits (28), Expect = 3e-005
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 527 tccttggtgttgtgcttggccacctcctcgagggtgtacacctt 570
||||||| |||||||||||| |||||||| ||||| ||||||||
Sbjct: 217 tccttggagttgtgcttggcgacctcctccagggtatacacctt 174
>gb|AU031260.1|AU031260 AU031260 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E61229_3A, mRNA sequence
Length = 697
Score = 50.1 bits (25), Expect = 0.002
Identities = 64/77 (83%)
Strand = Plus / Minus
Query: 446 agaacatcatcgcctccagggtgatcctccagaaacttggtcacattgtacaccttgccg 505
|||||||| || || |||||||| || |||| ||||||||||||| |||||||||||
Sbjct: 217 agaacatcctctccaccagggtggtcttccaagaacttggtcacatcatacaccttgcca 158
Query: 506 ccgatgacgagccagca 522
|||||||| ||||||
Sbjct: 157 tggatgacgacccagca 141
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 390 tgctgtgccccacatcttc 408
|||||||||||||||||||
Sbjct: 276 tgctgtgccccacatcttc 258
>gb|CF315935.1|CF315935 HD--05-A16.b1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--05-A16, mRNA sequence
Length = 676
Score = 50.1 bits (25), Expect = 0.002
Identities = 64/77 (83%)
Strand = Plus / Minus
Query: 446 agaacatcatcgcctccagggtgatcctccagaaacttggtcacattgtacaccttgccg 505
|||||||| || || |||||||| || |||| ||||||||||||| |||||||||||
Sbjct: 278 agaacatcctctccaccagggtggtcttccaagaacttggtcacatcatacaccttgcca 219
Query: 506 ccgatgacgagccagca 522
|||||||| ||||||
Sbjct: 218 tggatgacgacccagca 202
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 390 tgctgtgccccacatcttc 408
|||||||||||||||||||
Sbjct: 337 tgctgtgccccacatcttc 319
>gb|CV722203.1|CV722203 YBH--06-N05.b1 Rice before heading yeast two hybrid lambda phage
cDNA library (YBH) Oryza sativa (japonica
cultivar-group) cDNA clone YBH--06-N05, mRNA sequence
Length = 413
Score = 50.1 bits (25), Expect = 0.002
Identities = 64/77 (83%)
Strand = Plus / Minus
Query: 446 agaacatcatcgcctccagggtgatcctccagaaacttggtcacattgtacaccttgccg 505
|||||||| || || |||||||| || |||| ||||||||||||| |||||||||||
Sbjct: 265 agaacatcctctccaccagggtggtcttccaagaacttggtcacatcatacaccttgcca 206
Query: 506 ccgatgacgagccagca 522
|||||||| ||||||
Sbjct: 205 tggatgacgacccagca 189
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 390 tgctgtgccccacatcttc 408
|||||||||||||||||||
Sbjct: 324 tgctgtgccccacatcttc 306
>dbj|AK060133.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C09, full
insert sequence
Length = 917
Score = 50.1 bits (25), Expect = 0.002
Identities = 64/77 (83%)
Strand = Plus / Minus
Query: 446 agaacatcatcgcctccagggtgatcctccagaaacttggtcacattgtacaccttgccg 505
|||||||| || || |||||||| || |||| ||||||||||||| |||||||||||
Sbjct: 372 agaacatcctctccaccagggtggtcttccaagaacttggtcacatcatacaccttgcca 313
Query: 506 ccgatgacgagccagca 522
|||||||| ||||||
Sbjct: 312 tggatgacgacccagca 296
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 390 tgctgtgccccacatcttc 408
|||||||||||||||||||
Sbjct: 431 tgctgtgccccacatcttc 413
>dbj|AK073017.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033000L02, full
insert sequence
Length = 1909
Score = 50.1 bits (25), Expect = 0.002
Identities = 64/77 (83%)
Strand = Plus / Minus
Query: 446 agaacatcatcgcctccagggtgatcctccagaaacttggtcacattgtacaccttgccg 505
|||||||| || || |||||||| || |||| ||||||||||||| |||||||||||
Sbjct: 345 agaacatcctctccaccagggtggtcttccaagaacttggtcacatcatacaccttgcca 286
Query: 506 ccgatgacgagccagca 522
|||||||| ||||||
Sbjct: 285 tggatgacgacccagca 269
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 390 tgctgtgccccacatcttc 408
|||||||||||||||||||
Sbjct: 1423 tgctgtgccccacatcttc 1405
>emb|AJ429043.1|OSA429043 Oryza sativa mRNA for cytochrome b5 (cb5-1 gene)
Length = 725
Score = 50.1 bits (25), Expect = 0.002
Identities = 64/77 (83%)
Strand = Plus / Minus
Query: 446 agaacatcatcgcctccagggtgatcctccagaaacttggtcacattgtacaccttgccg 505
|||||||| || || |||||||| || |||| ||||||||||||| |||||||||||
Sbjct: 254 agaacatcctctccaccagggtggtcttccaagaacttggtcacatcatacaccttgcca 195
Query: 506 ccgatgacgagccagca 522
|||||||| ||||||
Sbjct: 194 tggatgacgacccagca 178
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 390 tgctgtgccccacatcttc 408
|||||||||||||||||||
Sbjct: 313 tgctgtgccccacatcttc 295
>gb|CF281572.1|CF281572 14ETL--08-K22.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--08-K22, mRNA sequence
Length = 669
Score = 44.1 bits (22), Expect = 0.098
Identities = 52/62 (83%)
Strand = Plus / Minus
Query: 461 ccagggtgatcctccagaaacttggtcacattgtacaccttgccgccgatgacgagccag 520
|||||||| || |||| ||||||||||||| ||||||||||| |||||||| ||||
Sbjct: 367 ccagggtggtcttccaagaacttggtcacatcatacaccttgccatggatgacgacccag 308
Query: 521 ca 522
||
Sbjct: 307 ca 306
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 390 tgctgtgccccacatcttc 408
|||||||||||||||||||
Sbjct: 441 tgctgtgccccacatcttc 423
>dbj|AK066861.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013079M22, full
insert sequence
Length = 817
Score = 44.1 bits (22), Expect = 0.098
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 493 gtacaccttgccgccgatgacgagccagca 522
||||||||||||| |||||| |||||||||
Sbjct: 330 gtacaccttgccggcgatgatgagccagca 301
>ref|XM_467062.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 818
Score = 44.1 bits (22), Expect = 0.098
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 493 gtacaccttgccgccgatgacgagccagca 522
||||||||||||| |||||| |||||||||
Sbjct: 331 gtacaccttgccggcgatgatgagccagca 302
>gb|CB643558.1|CB643558 OSJNEb04F03.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb04F03 5', mRNA sequence
Length = 838
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 608 gggtggaggaggcggaggcg 627
||||||||||||||||||||
Sbjct: 38 gggtggaggaggcggaggcg 19
>dbj|AK073441.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044E24, full
insert sequence
Length = 2716
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 608 gggtggaggaggcggaggcg 627
||||||||||||||||||||
Sbjct: 303 gggtggaggaggcggaggcg 284
>dbj|AK120668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160C21, full
insert sequence
Length = 3713
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 608 gggtggaggaggcggaggcg 627
||||||||||||||||||||
Sbjct: 123 gggtggaggaggcggaggcg 104
>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence, complete
sequence
Length = 116443
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 608 gggtggaggaggcggaggcg 627
||||||||||||||||||||
Sbjct: 114593 gggtggaggaggcggaggcg 114574
>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete
sequence
Length = 156606
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 608 gggtggaggaggcggaggcg 627
||||||||||||||||||||
Sbjct: 132622 gggtggaggaggcggaggcg 132641
>dbj|AP002897.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0686E09
Length = 156425
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcga 628
||||||||||||||||||||
Sbjct: 101528 ggtggaggaggcggaggcga 101547
>gb|AACV01001836.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001836, whole
genome shotgun sequence
Length = 10854
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcga 628
||||||||||||||||||||
Sbjct: 3073 ggtggaggaggcggaggcga 3092
>gb|AACV01002671.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002671, whole
genome shotgun sequence
Length = 28586
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 608 gggtggaggaggcggaggcg 627
||||||||||||||||||||
Sbjct: 1902 gggtggaggaggcggaggcg 1883
>gb|AACV01007938.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007938, whole
genome shotgun sequence
Length = 8859
Score = 40.1 bits (20), Expect = 1.5
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtc 528
||||||||| ||| ||||| ||||||||||||
Sbjct: 1870 accttgccgtcgacgacgacccagcagtcgtc 1839
>gb|AACV01008253.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg008253, whole
genome shotgun sequence
Length = 36046
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 608 gggtggaggaggcggaggcg 627
||||||||||||||||||||
Sbjct: 25424 gggtggaggaggcggaggcg 25443
>gb|AACV01016256.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016256, whole
genome shotgun sequence
Length = 1248
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 612 ggaggaggcggaggcgagga 631
||||||||||||||||||||
Sbjct: 1063 ggaggaggcggaggcgagga 1044
>ref|XM_470402.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2714
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 608 gggtggaggaggcggaggcg 627
||||||||||||||||||||
Sbjct: 301 gggtggaggaggcggaggcg 282
>ref|NT_079858.2| Oryza sativa (japonica cultivar-group)
Length = 2468003
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 612 ggaggaggcggaggcgagga 631
||||||||||||||||||||
Sbjct: 1648117 ggaggaggcggaggcgagga 1648136
>ref|NT_079914.2| Oryza sativa (japonica cultivar-group)
Length = 1404373
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 608 gggtggaggaggcggaggcg 627
||||||||||||||||||||
Sbjct: 555564 gggtggaggaggcggaggcg 555583
>ref|NT_079926.2| Oryza sativa (japonica cultivar-group)
Length = 8469246
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcga 628
||||||||||||||||||||
Sbjct: 7518093 ggtggaggaggcggaggcga 7518112
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 608 gggtggaggaggcggaggcg 627
||||||||||||||||||||
Sbjct: 10964135 gggtggaggaggcggaggcg 10964154
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 13091904 ggtggaggaggcggaggcg 13091886
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 2953861 ggtggaggaggcggaggcg 2953843
>dbj|AP005190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0477A12
Length = 138141
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 612 ggaggaggcggaggcgagga 631
||||||||||||||||||||
Sbjct: 118622 ggaggaggcggaggcgagga 118641
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
Length = 17249721
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 612 ggaggaggcggaggcgagga 631
||||||||||||||||||||
Sbjct: 5806391 ggaggaggcggaggcgagga 5806410
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 8389485 ggtggaggaggcggaggcg 8389503
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 612 ggaggaggcggaggcgagg 630
|||||||||||||||||||
Sbjct: 7379648 ggaggaggcggaggcgagg 7379630
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
clone:P0005H10
Length = 142885
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 608 gggtggaggaggcggaggcg 627
||||||||||||||||||||
Sbjct: 87921 gggtggaggaggcggaggcg 87940
>gb|CH401226.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000063 genomic
scaffold, whole genome shotgun sequence
Length = 15204090
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 612 ggaggaggcggaggcgagga 631
||||||||||||||||||||
Sbjct: 3834421 ggaggaggcggaggcgagga 3834440
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 608 gggtggaggaggcggaggcg 627
||||||||||||||||||||
Sbjct: 8992184 gggtggaggaggcggaggcg 8992203
Score = 40.1 bits (20), Expect = 1.5
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtc 528
||||||||| ||| ||||| ||||||||||||
Sbjct: 4475041 accttgccgtcgacgacgacccagcagtcgtc 4475010
>gb|CH401166.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000003 genomic
scaffold, whole genome shotgun sequence
Length = 8539496
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcga 628
||||||||||||||||||||
Sbjct: 7483278 ggtggaggaggcggaggcga 7483297
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 612 ggaggaggcggaggcgagga 631
||||||||||||||||||||
Sbjct: 17233860 ggaggaggcggaggcgagga 17233879
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 612 ggaggaggcggaggcgagg 630
|||||||||||||||||||
Sbjct: 8479123 ggaggaggcggaggcgagg 8479105
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 1872293 ggtggaggaggcggaggcg 1872275
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 573942 ggtggaggaggcggaggcg 573924
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 608 gggtggaggaggcggaggcg 627
||||||||||||||||||||
Sbjct: 36258347 gggtggaggaggcggaggcg 36258366
Score = 40.1 bits (20), Expect = 1.5
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 497 accttgccgccgatgacgagccagcagtcgtc 528
||||||||| ||| ||||| ||||||||||||
Sbjct: 31741204 accttgccgtcgacgacgacccagcagtcgtc 31741173
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 292 gtgcggctgcttggggggc 310
|||||||||||||||||||
Sbjct: 18336653 gtgcggctgcttggggggc 18336635
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 607 agggtggaggaggcggagg 625
|||||||||||||||||||
Sbjct: 5245585 agggtggaggaggcggagg 5245603
>emb|AL607003.3|OSJN00130 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006N15,
complete sequence
Length = 133413
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 612 ggaggaggcggaggcgagga 631
||||||||||||||||||||
Sbjct: 99752 ggaggaggcggaggcgagga 99771
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 608 gggtggaggaggcggaggcg 627
||||||||||||||||||||
Sbjct: 35343933 gggtggaggaggcggaggcg 35343952
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 292 gtgcggctgcttggggggc 310
|||||||||||||||||||
Sbjct: 17520690 gtgcggctgcttggggggc 17520672
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 607 agggtggaggaggcggagg 625
|||||||||||||||||||
Sbjct: 5049109 agggtggaggaggcggagg 5049127
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 612 ggaggaggcggaggcgagga 631
||||||||||||||||||||
Sbjct: 18397829 ggaggaggcggaggcgagga 18397848
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 615 ggaggcggaggcgaggact 633
|||||||||||||||||||
Sbjct: 12575679 ggaggcggaggcgaggact 12575697
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 612 ggaggaggcggaggcgagga 631
||||||||||||||||||||
Sbjct: 18183316 ggaggaggcggaggcgagga 18183335
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 20776480 ggtggaggaggcggaggcg 20776498
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 612 ggaggaggcggaggcgagg 630
|||||||||||||||||||
Sbjct: 19756573 ggaggaggcggaggcgagg 19756555
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 612 ggaggaggcggaggcgagg 630
|||||||||||||||||||
Sbjct: 8570476 ggaggaggcggaggcgagg 8570458
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 1928786 ggtggaggaggcggaggcg 1928768
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 588035 ggtggaggaggcggaggcg 588017
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 40.1 bits (20), Expect = 1.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 608 gggtggaggaggcggaggcg 627
||||||||||||||||||||
Sbjct: 35253861 gggtggaggaggcggaggcg 35253880
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 292 gtgcggctgcttggggggc 310
|||||||||||||||||||
Sbjct: 17527149 gtgcggctgcttggggggc 17527131
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 607 agggtggaggaggcggagg 625
|||||||||||||||||||
Sbjct: 5049894 agggtggaggaggcggagg 5049912
>gb|AU082688.1|AU082688 AU082688 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E31740, mRNA sequence
Length = 269
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 145 ggtggaggaggcggaggcg 163
>gb|AU173000.1|AU173000 AU173000 Rice cDNA from immature leaf including apical meristem
(under short day condition) Oryza sativa (japonica
cultivar-group) cDNA clone E60367, mRNA sequence
Length = 449
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 145 ggtggaggaggcggaggcg 163
>gb|AU173850.1|AU173850 AU173850 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10393, mRNA sequence
Length = 441
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 607 agggtggaggaggcggagg 625
|||||||||||||||||||
Sbjct: 84 agggtggaggaggcggagg 66
>gb|CF276208.1|CF276208 14ETL--01-E09.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--01-E09, mRNA sequence
Length = 575
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 292 gtgcggctgcttggggggc 310
|||||||||||||||||||
Sbjct: 30 gtgcggctgcttggggggc 12
>gb|CF278570.1|CF278570 14ETL--04-I11.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--04-I11, mRNA sequence
Length = 672
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 292 gtgcggctgcttggggggc 310
|||||||||||||||||||
Sbjct: 30 gtgcggctgcttggggggc 12
>gb|CF281847.1|CF281847 14ETL--09-B11.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--09-B11, mRNA sequence
Length = 644
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 292 gtgcggctgcttggggggc 310
|||||||||||||||||||
Sbjct: 24 gtgcggctgcttggggggc 6
>gb|CF290875.1|CF290875 14ROOT--01-B08.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-B08, mRNA sequence
Length = 572
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 292 gtgcggctgcttggggggc 310
|||||||||||||||||||
Sbjct: 29 gtgcggctgcttggggggc 11
>gb|CF291710.1|CF291710 14ROOT--02-D24.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-D24, mRNA sequence
Length = 653
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 292 gtgcggctgcttggggggc 310
|||||||||||||||||||
Sbjct: 21 gtgcggctgcttggggggc 3
>gb|CF292092.1|CF292092 14ROOT--02-M13.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-M13, mRNA sequence
Length = 468
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 292 gtgcggctgcttggggggc 310
|||||||||||||||||||
Sbjct: 21 gtgcggctgcttggggggc 3
>gb|CF314044.1|CF314044 HD--02-G18.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--02-G18, mRNA sequence
Length = 657
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 292 gtgcggctgcttggggggc 310
|||||||||||||||||||
Sbjct: 24 gtgcggctgcttggggggc 6
>gb|CV725241.1|CV725241 14Salt--02-D17.b1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--02-D17, mRNA sequence
Length = 520
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 292 gtgcggctgcttggggggc 310
|||||||||||||||||||
Sbjct: 76 gtgcggctgcttggggggc 58
>gb|CV725528.1|CV725528 14Salt--02-K14.b1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--02-K14, mRNA sequence
Length = 493
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 292 gtgcggctgcttggggggc 310
|||||||||||||||||||
Sbjct: 29 gtgcggctgcttggggggc 11
>gb|CV727338.1|CV727338 14Salt--05-H01.b1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--05-H01, mRNA sequence
Length = 254
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 292 gtgcggctgcttggggggc 310
|||||||||||||||||||
Sbjct: 71 gtgcggctgcttggggggc 53
>gb|CV729919.1|CV729919 FLO--03-D08.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--03-D08,
mRNA sequence
Length = 557
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 292 gtgcggctgcttggggggc 310
|||||||||||||||||||
Sbjct: 89 gtgcggctgcttggggggc 71
>gb|CV732784.1|CV732784 FLO--07-G15.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--07-G15,
mRNA sequence
Length = 519
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 292 gtgcggctgcttggggggc 310
|||||||||||||||||||
Sbjct: 58 gtgcggctgcttggggggc 40
>gb|CV733513.1|CV733513 FLO--08-H10.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--08-H10,
mRNA sequence
Length = 535
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 292 gtgcggctgcttggggggc 310
|||||||||||||||||||
Sbjct: 73 gtgcggctgcttggggggc 55
>gb|D48242.2|D48242 RICS14363A Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA, mRNA sequence
Length = 435
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 157 ggtggaggaggcggaggcg 175
>gb|BP184955.1|BP184955 BP184955 pNS rice callus cDNA Oryza sativa (japonica
cultivar-group) cDNA clone 23C4AR013, mRNA sequence
Length = 654
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 54 ggtggaggaggcggaggcg 72
>gb|AF045571.1|AF045571 Oryza sativa nucleic acid binding protein mRNA, complete cds
Length = 1125
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 160 ggtggaggaggcggaggcg 178
>gb|AF047428.1|AF047428 Oryza sativa nucleic acid binding protein mRNA, complete cds
Length = 1156
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 158 ggtggaggaggcggaggcg 176
>emb|AL607093.1|OSJN01002 Oryza sativa (japonica cultivar-group) chromosome 7 clone
OSJNBa0046C22, *** SEQUENCING IN PROGRESS ***
Length = 139381
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 82620 ggtggaggaggcggaggcg 82602
>dbj|AP003895.1| Oryza sativa (japonica cultivar-group) chromosome 7 clone OJ1564_F08,
*** SEQUENCING IN PROGRESS ***
Length = 112346
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 3966 ggtggaggaggcggaggcg 3948
>dbj|AP003945.1| Oryza sativa (japonica cultivar-group) chromosome 7 clone OJ1134_A07, ***
SEQUENCING IN PROGRESS ***
Length = 146543
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 612 ggaggaggcggaggcgagg 630
|||||||||||||||||||
Sbjct: 119847 ggaggaggcggaggcgagg 119829
>dbj|AP003954.1| Oryza sativa (japonica cultivar-group) chromosome 7 clone OJ1381_B07,
*** SEQUENCING IN PROGRESS ***
Length = 131711
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 612 ggaggaggcggaggcgagg 630
|||||||||||||||||||
Sbjct: 66065 ggaggaggcggaggcgagg 66083
>gb|AC120530.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0049D05,
*** SEQUENCING IN PROGRESS ***, 17 ordered pieces
Length = 144207
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 130267 ggtggaggaggcggaggcg 130285
>dbj|AP005762.1| Oryza sativa (japonica cultivar-group) chromosome 2 clone B1153B02, ***
SEQUENCING IN PROGRESS ***
Length = 134129
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 136 tgtggatgatgttatgttt 154
|||||||||||||||||||
Sbjct: 12984 tgtggatgatgttatgttt 12966
>gb|AC105261.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_D12,
*** SEQUENCING IN PROGRESS ***, 9 ordered pieces
Length = 135997
Score = 38.2 bits (19), Expect = 6.0
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcgagga 631
|||||||||||||| ||||||||
Sbjct: 41932 ggtggaggaggcggcggcgagga 41910
>dbj|AK058535.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-A12, full
insert sequence
Length = 780
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 607 agggtggaggaggcggagg 625
|||||||||||||||||||
Sbjct: 100 agggtggaggaggcggagg 82
>dbj|AK067470.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106H18, full
insert sequence
Length = 862
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 292 gtgcggctgcttggggggc 310
|||||||||||||||||||
Sbjct: 25 gtgcggctgcttggggggc 7
>dbj|AK068855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169I11, full
insert sequence
Length = 1672
Score = 38.2 bits (19), Expect = 6.0
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcgagga 631
|||||||||||||| ||||||||
Sbjct: 118 ggtggaggaggcggcggcgagga 96
>dbj|AK071139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082D05, full
insert sequence
Length = 1296
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 270 ggtggaggaggcggaggcg 288
>dbj|AK099004.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108A17, full
insert sequence
Length = 1599
Score = 38.2 bits (19), Expect = 6.0
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcgagga 631
|||||||||||||| ||||||||
Sbjct: 70 ggtggaggaggcggcggcgagga 48
>dbj|AK099047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147E16, full
insert sequence
Length = 937
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 292 gtgcggctgcttggggggc 310
|||||||||||||||||||
Sbjct: 23 gtgcggctgcttggggggc 5
>dbj|AK104108.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-F06, full
insert sequence
Length = 780
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 607 agggtggaggaggcggagg 625
|||||||||||||||||||
Sbjct: 100 agggtggaggaggcggagg 82
>dbj|AK104954.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-G11, full
insert sequence
Length = 786
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 292 gtgcggctgcttggggggc 310
|||||||||||||||||||
Sbjct: 22 gtgcggctgcttggggggc 4
>dbj|AK111204.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-178-E08, full
insert sequence
Length = 1207
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 559 ggtggaggaggcggaggcg 541
>dbj|AK120242.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044G09, full
insert sequence
Length = 4810
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 530 ttggtgttgtgcttggcca 548
|||||||||||||||||||
Sbjct: 2629 ttggtgttgtgcttggcca 2647
>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence
Length = 193444
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 156932 ggtggaggaggcggaggcg 156914
>gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 genomic sequence, complete
sequence
Length = 143961
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 530 ttggtgttgtgcttggcca 548
|||||||||||||||||||
Sbjct: 60643 ttggtgttgtgcttggcca 60625
>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBb0058P18, from chromosome 3, complete sequence
Length = 155037
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 607 agggtggaggaggcggagg 625
|||||||||||||||||||
Sbjct: 119813 agggtggaggaggcggagg 119795
>gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNAa0064E16, from chromosome 3, complete sequence
Length = 139123
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 607 agggtggaggaggcggagg 625
|||||||||||||||||||
Sbjct: 114348 agggtggaggaggcggagg 114366
>gb|AC118289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
OSJNBb0099O15, complete sequence
Length = 137357
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 612 ggaggaggcggaggcgagg 630
|||||||||||||||||||
Sbjct: 29800 ggaggaggcggaggcgagg 29818
>emb|AL713939.6|CNS07YPL Oryza sativa chromosome 12, . BAC OJ1722_D03 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 171861
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 390 tgctgtgccccacatcttc 408
|||||||||||||||||||
Sbjct: 96295 tgctgtgccccacatcttc 96277
Score = 38.2 bits (19), Expect = 6.0
Identities = 46/55 (83%)
Strand = Plus / Minus
Query: 446 agaacatcatcgcctccagggtgatcctccagaaacttggtcacattgtacacct 500
|||||||| || || |||||||| || |||| ||||||||||||| |||||||
Sbjct: 95217 agaacatcctctccaccagggtggtcttccaagaacttggtcacatcatacacct 95163
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0681F05
Length = 144741
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 129230 ggtggaggaggcggaggcg 129248
>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0495H05
Length = 205595
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 13083 ggtggaggaggcggaggcg 13065
>dbj|AP004269.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0048D08
Length = 145772
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 612 ggaggaggcggaggcgagg 630
|||||||||||||||||||
Sbjct: 88579 ggaggaggcggaggcgagg 88561
>dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0507H12
Length = 143030
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 133365 ggtggaggaggcggaggcg 133347
>dbj|AP005824.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0669H03
Length = 167878
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 612 ggaggaggcggaggcgagg 630
|||||||||||||||||||
Sbjct: 102944 ggaggaggcggaggcgagg 102926
>ref|NT_107114.1| Oryza sativa (japonica cultivar-group)
Length = 457033
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 433706 ggtggaggaggcggaggcg 433688
>ref|NT_107160.1| Oryza sativa (japonica cultivar-group)
Length = 1294763
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 390 tgctgtgccccacatcttc 408
|||||||||||||||||||
Sbjct: 872275 tgctgtgccccacatcttc 872257
Score = 38.2 bits (19), Expect = 6.0
Identities = 46/55 (83%)
Strand = Plus / Minus
Query: 446 agaacatcatcgcctccagggtgatcctccagaaacttggtcacattgtacacct 500
|||||||| || || |||||||| || |||| ||||||||||||| |||||||
Sbjct: 871197 agaacatcctctccaccagggtggtcttccaagaacttggtcacatcatacacct 871143
>ref|NT_107208.1| Oryza sativa (japonica cultivar-group)
Length = 292514
Score = 38.2 bits (19), Expect = 6.0
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcgagga 631
|||||||||||||| ||||||||
Sbjct: 167966 ggtggaggaggcggcggcgagga 167944
>ref|NT_107237.1| Oryza sativa (japonica cultivar-group)
Length = 2924261
Score = 38.2 bits (19), Expect = 6.0
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 606 cagggtggaggaggcggaggcgaggac 632
|||||||||||||||| |||| |||||
Sbjct: 19257 cagggtggaggaggcgaaggcaaggac 19231
>dbj|AP003567.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OSJNBb0022N24
Length = 124062
Score = 38.2 bits (19), Expect = 6.0
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 33 agaagtgattttatactaataga 55
||||||||||||||| |||||||
Sbjct: 93844 agaagtgattttatagtaataga 93866
>gb|AACV01000852.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000852, whole
genome shotgun sequence
Length = 22428
Score = 38.2 bits (19), Expect = 6.0
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 33 agaagtgattttatactaataga 55
||||||||||||||| |||||||
Sbjct: 21478 agaagtgattttatagtaataga 21456
>gb|AACV01002135.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002135, whole
genome shotgun sequence
Length = 32245
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 24537 ggtggaggaggcggaggcg 24519
>gb|AACV01002823.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002823, whole
genome shotgun sequence
Length = 17148
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 12512 ggtggaggaggcggaggcg 12530
>gb|AACV01005136.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg005136, whole
genome shotgun sequence
Length = 50097
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 136 tgtggatgatgttatgttt 154
|||||||||||||||||||
Sbjct: 40366 tgtggatgatgttatgttt 40384
>gb|AACV01006046.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006046,
whole genome shotgun sequence
Length = 17147
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 607 agggtggaggaggcggagg 625
|||||||||||||||||||
Sbjct: 353 agggtggaggaggcggagg 335
>gb|AACV01006949.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006949, whole
genome shotgun sequence
Length = 33882
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 292 gtgcggctgcttggggggc 310
|||||||||||||||||||
Sbjct: 14550 gtgcggctgcttggggggc 14568
>gb|AACV01009160.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009160, whole
genome shotgun sequence
Length = 30732
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 615 ggaggcggaggcgaggact 633
|||||||||||||||||||
Sbjct: 26734 ggaggcggaggcgaggact 26752
>gb|AACV01011747.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg011747, whole
genome shotgun sequence
Length = 14985
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 645 gctgttgctgcttgctgtg 663
|||||||||||||||||||
Sbjct: 11767 gctgttgctgcttgctgtg 11785
>gb|AACV01011884.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg011884, whole
genome shotgun sequence
Length = 60550
Score = 38.2 bits (19), Expect = 6.0
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcgagga 631
|||||||||||||| ||||||||
Sbjct: 47639 ggtggaggaggcggcggcgagga 47617
>gb|AACV01012434.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012434, whole
genome shotgun sequence
Length = 38325
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 612 ggaggaggcggaggcgagg 630
|||||||||||||||||||
Sbjct: 31205 ggaggaggcggaggcgagg 31187
>gb|AACV01013622.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013622, whole
genome shotgun sequence
Length = 34306
Score = 38.2 bits (19), Expect = 6.0
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 606 cagggtggaggaggcggaggcgaggac 632
|||||||||||||||| |||| |||||
Sbjct: 29088 cagggtggaggaggcgaaggcaaggac 29114
>gb|AACV01015039.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015039,
whole genome shotgun sequence
Length = 29502
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 706 ggtggaggaggcggaggcg 724
>gb|AACV01015135.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015135, whole
genome shotgun sequence
Length = 21436
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 2538 ggtggaggaggcggaggcg 2520
>gb|AACV01015603.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015603, whole
genome shotgun sequence
Length = 27067
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 612 ggaggaggcggaggcgagg 630
|||||||||||||||||||
Sbjct: 4363 ggaggaggcggaggcgagg 4345
>gb|AACV01022162.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg022162, whole
genome shotgun sequence
Length = 35112
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 530 ttggtgttgtgcttggcca 548
|||||||||||||||||||
Sbjct: 29253 ttggtgttgtgcttggcca 29271
>gb|AACV01024223.1| Oryza sativa (japonica cultivar-group) chromosome 12 Ctg024223, whole
genome shotgun sequence
Length = 10886
Score = 38.2 bits (19), Expect = 6.0
Identities = 46/55 (83%)
Strand = Plus / Plus
Query: 446 agaacatcatcgcctccagggtgatcctccagaaacttggtcacattgtacacct 500
|||||||| || || |||||||| || |||| ||||||||||||| |||||||
Sbjct: 4943 agaacatcctctccaccagggtggtcttccaagaacttggtcacatcatacacct 4997
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 390 tgctgtgccccacatcttc 408
|||||||||||||||||||
Sbjct: 3865 tgctgtgccccacatcttc 3883
>gb|AACV01026386.1| Oryza sativa (japonica cultivar-group) Ctg026386, whole genome
shotgun sequence
Length = 10330
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 612 ggaggaggcggaggcgagg 630
|||||||||||||||||||
Sbjct: 7847 ggaggaggcggaggcgagg 7829
>gb|AACV01030258.1| Oryza sativa (japonica cultivar-group) Ctg030258, whole genome
shotgun sequence
Length = 3730
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 3132 ggtggaggaggcggaggcg 3114
>gb|AACV01031609.1| Oryza sativa (japonica cultivar-group) Ctg031609, whole genome
shotgun sequence
Length = 3029
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 9 ggtggaggaggcggaggcg 27
>gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
OSJNBa0077J17, complete sequence
Length = 141598
Score = 38.2 bits (19), Expect = 6.0
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcgagga 631
|||||||||||||| ||||||||
Sbjct: 17050 ggtggaggaggcggcggcgagga 17028
>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006B22,
complete sequence
Length = 166052
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 645 gctgttgctgcttgctgtg 663
|||||||||||||||||||
Sbjct: 105265 gctgttgctgcttgctgtg 105247
>dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:B1026E06
Length = 162784
Score = 38.2 bits (19), Expect = 6.0
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 606 cagggtggaggaggcggaggcgaggac 632
|||||||||||||||| |||| |||||
Sbjct: 19257 cagggtggaggaggcgaaggcaaggac 19231
>ref|NM_190195.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 819
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 46 ggtggaggaggcggaggcg 64
>ref|NM_192118.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 738
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 401 ggtggaggaggcggaggcg 383
>ref|NM_197875.1| Oryza sativa (japonica cultivar-group) hypothetical protein
(OSJNBa0027L23.16), mRNA
Length = 3999
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 530 ttggtgttgtgcttggcca 548
|||||||||||||||||||
Sbjct: 2420 ttggtgttgtgcttggcca 2438
>ref|NT_080068.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4609300
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 530 ttggtgttgtgcttggcca 548
|||||||||||||||||||
Sbjct: 4331614 ttggtgttgtgcttggcca 4331596
>ref|XM_471597.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 4890
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 615 ggaggcggaggcgaggact 633
|||||||||||||||||||
Sbjct: 465 ggaggcggaggcgaggact 483
>ref|XM_476555.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1104
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 970 ggtggaggaggcggaggcg 952
>ref|XM_482230.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 171
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 49 ggtggaggaggcggaggcg 67
>ref|NT_107181.1| Oryza sativa (japonica cultivar-group)
Length = 9248309
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 136 tgtggatgatgttatgttt 154
|||||||||||||||||||
Sbjct: 2747638 tgtggatgatgttatgttt 2747656
>ref|NT_107189.1| Oryza sativa (japonica cultivar-group)
Length = 1905944
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 607 agggtggaggaggcggagg 625
|||||||||||||||||||
Sbjct: 213440 agggtggaggaggcggagg 213458
>ref|NT_107195.1| Oryza sativa (japonica cultivar-group)
Length = 1302112
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 615 ggaggcggaggcgaggact 633
|||||||||||||||||||
Sbjct: 504234 ggaggcggaggcgaggact 504252
>ref|NT_107206.1| Oryza sativa (japonica cultivar-group)
Length = 2441071
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 645 gctgttgctgcttgctgtg 663
|||||||||||||||||||
Sbjct: 2303006 gctgttgctgcttgctgtg 2302988
>ref|NT_107214.1| Oryza sativa (japonica cultivar-group)
Length = 1031295
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 612 ggaggaggcggaggcgagg 630
|||||||||||||||||||
Sbjct: 29800 ggaggaggcggaggcgagg 29818
>ref|NT_079921.2| Oryza sativa (japonica cultivar-group)
Length = 1595909
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 292 gtgcggctgcttggggggc 310
|||||||||||||||||||
Sbjct: 1006858 gtgcggctgcttggggggc 1006840
>dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0135D07
Length = 170587
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 136 tgtggatgatgttatgttt 154
|||||||||||||||||||
Sbjct: 62308 tgtggatgatgttatgttt 62326
>ref|NT_036323.3| Oryza sativa (japonica cultivar-group)
Length = 1440362
Score = 38.2 bits (19), Expect = 6.0
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 33 agaagtgattttatactaataga 55
||||||||||||||| |||||||
Sbjct: 1404115 agaagtgattttatagtaataga 1404137
>dbj|AP003746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1123_C12
Length = 114309
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 22537 ggtggaggaggcggaggcg 22519
>dbj|AP004137.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1297_D02
Length = 104470
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 22430 ggtggaggaggcggaggcg 22448
>ref|NT_079879.2| Oryza sativa (japonica cultivar-group)
Length = 11570172
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 612 ggaggaggcggaggcgagg 630
|||||||||||||||||||
Sbjct: 8526548 ggaggaggcggaggcgagg 8526530
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 1884858 ggtggaggaggcggaggcg 1884840
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 581972 ggtggaggaggcggaggcg 581954
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 18617590 ggtggaggaggcggaggcg 18617608
>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0519D04
Length = 193068
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 140908 ggtggaggaggcggaggcg 140890
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1099D03
Length = 191022
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 21824 ggtggaggaggcggaggcg 21806
>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0434C04
Length = 150064
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 84532 ggtggaggaggcggaggcg 84514
>dbj|AP006856.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
fosmid clone:OSJNOa173H09
Length = 39054
Score = 38.2 bits (19), Expect = 6.0
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 33 agaagtgattttatactaataga 55
||||||||||||||| |||||||
Sbjct: 2807 agaagtgattttatagtaataga 2829
>gb|CH401492.1| Oryza sativa (japonica cultivar-group) scaffold000491 genomic
scaffold, whole genome shotgun sequence
Length = 13960
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 612 ggaggaggcggaggcgagg 630
|||||||||||||||||||
Sbjct: 7847 ggaggaggcggaggcgagg 7829
>gb|CH401273.1| Oryza sativa (japonica cultivar-group) chromosome 12 scaffold000110
genomic scaffold, whole genome shotgun sequence
Length = 2295345
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 390 tgctgtgccccacatcttc 408
|||||||||||||||||||
Sbjct: 101448 tgctgtgccccacatcttc 101430
Score = 38.2 bits (19), Expect = 6.0
Identities = 46/55 (83%)
Strand = Plus / Minus
Query: 446 agaacatcatcgcctccagggtgatcctccagaaacttggtcacattgtacacct 500
|||||||| || || |||||||| || |||| ||||||||||||| |||||||
Sbjct: 100370 agaacatcctctccaccagggtggtcttccaagaacttggtcacatcatacacct 100316
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 530 ttggtgttgtgcttggcca 548
|||||||||||||||||||
Sbjct: 10344299 ttggtgttgtgcttggcca 10344281
>gb|CH401221.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000058 genomic
scaffold, whole genome shotgun sequence
Length = 3500188
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 612 ggaggaggcggaggcgagg 630
|||||||||||||||||||
Sbjct: 2425498 ggaggaggcggaggcgagg 2425480
>gb|CH401219.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000056
genomic scaffold, whole genome shotgun sequence
Length = 1384745
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 440389 ggtggaggaggcggaggcg 440371
>gb|CH401218.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000055
genomic scaffold, whole genome shotgun sequence
Length = 1431804
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcg 627
|||||||||||||||||||
Sbjct: 573942 ggtggaggaggcggaggcg 573924
>gb|CH401210.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000047 genomic
scaffold, whole genome shotgun sequence
Length = 2656042
Score = 38.2 bits (19), Expect = 6.0
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 606 cagggtggaggaggcggaggcgaggac 632
|||||||||||||||| |||| |||||
Sbjct: 1754685 cagggtggaggaggcgaaggcaaggac 1754659
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 38.2 bits (19), Expect = 6.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 612 ggaggaggcggaggcgagg 630
|||||||||||||||||||
Sbjct: 6027108 ggaggaggcggaggcgagg 6027126
>gb|CH401205.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000042 genomic
scaffold, whole genome shotgun sequence
Length = 2493951
Score = 38.2 bits (19), Expect = 6.0
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 609 ggtggaggaggcggaggcgagga 631
|||||||||||||| ||||||||
Sbjct: 1121956 ggtggaggaggcggcggcgagga 1121934
Database: Oryza_nucl_with_EST.fasta
Posted date: May 2, 2006 3:04 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,053,340
Number of Sequences: 438736
Number of extensions: 1053340
Number of successful extensions: 11190
Number of sequences better than 10.0: 274
Number of HSP's better than 10.0 without gapping: 310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9350
Number of HSP's gapped (non-prelim): 1827
length of query: 684
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 663
effective length of database: 2,791,206,460
effective search space: 1850569882980
effective search space used: 1850569882980
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)