BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.226
(818 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF290947.1|CF290947 14ROOT--01-D01.b1 Rice root plasmid ... 553 e-155
gb|CB670862.1|CB670862 OSJNEe04C16.f OSJNEe Oryza sativa (j... 537 e-150
dbj|AP002540.2| Oryza sativa (japonica cultivar-group) geno... 537 e-150
gb|AACV01000195.1| Oryza sativa (japonica cultivar-group) c... 537 e-150
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 537 e-150
ref|NM_184374.1| Oryza sativa (japonica cultivar-group), mRNA 537 e-150
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 537 e-150
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 537 e-150
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 537 e-150
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 537 e-150
gb|CB670863.1|CB670863 OSJNEe04C16.r OSJNEe Oryza sativa (j... 529 e-148
gb|AU097679.1|AU097679 AU097679 Rice root Oryza sativa (jap... 517 e-144
gb|CF313653.1|CF313653 HD--01-N17.g1 OsHDAC1-overexpressing... 517 e-144
gb|AU097673.1|AU097673 AU097673 Rice panicle shorter than 3... 470 e-130
gb|CO436072.1|CO436072 OsMR994 5MT resistant rice mutant cD... 470 e-130
gb|AC098832.3| Oryza sativa (japonica cultivar-group) chrom... 470 e-130
gb|AC104284.2| Oryza sativa (japonica cultivar-group) chrom... 470 e-130
gb|AACV01012743.1| Oryza sativa (japonica cultivar-group) c... 470 e-130
ref|XM_475912.1| Oryza sativa (japonica cultivar-group), p... 470 e-130
ref|NT_107222.1| Oryza sativa (japonica cultivar-group) 470 e-130
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 470 e-130
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 470 e-130
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 470 e-130
gb|CF307934.1|CF307934 ABF--01-I21.b1 ABF3-overexpressing t... 466 e-129
gb|CA998897.1|CA998897 S345N_D05 Rice cold stress germinati... 464 e-128
gb|AU032007.1|AU032007 AU032007 Rice root Oryza sativa (jap... 454 e-125
gb|AU070936.1|AU070936 AU070936 Rice cDNA from young root O... 454 e-125
gb|CA998848.1|CA998848 S345M_G12 Rice cold stress germinati... 454 e-125
gb|CB662156.1|CB662156 OSJNEd05O18.f OSJNEd Oryza sativa (j... 454 e-125
gb|CB662157.1|CB662157 OSJNEd05O18.r OSJNEd Oryza sativa (j... 454 e-125
gb|CF278594.1|CF278594 14ETL--04-I24.b1 Rice etiolated leaf... 454 e-125
gb|CF292227.1|CF292227 14ROOT--02-P16.b1 Rice root plasmid ... 454 e-125
gb|CF333473.1|CF333473 JMT--02-G04.b1 AtJMT-overexpressing ... 454 e-125
gb|CV731987.1|CV731987 FLO--06-E06.g1 Rice flower lambda ph... 454 e-125
gb|BP184585.1|BP184585 BP184585 pNS rice panicle cDNA, flow... 454 e-125
gb|BP184926.1|BP184926 BP184926 pNS rice callus cDNA Oryza ... 454 e-125
dbj|AP002522.1| Oryza sativa (japonica cultivar-group) geno... 454 e-125
dbj|AP003045.2| Oryza sativa (japonica cultivar-group) geno... 454 e-125
gb|AACV01000215.1| Oryza sativa (japonica cultivar-group) c... 454 e-125
ref|NM_184407.1| Oryza sativa (japonica cultivar-group), mRNA 454 e-125
ref|NM_184409.1| Oryza sativa (japonica cultivar-group), mRNA 454 e-125
gb|CA755827.1|CA755827 BR030029000_PLATE_B12_90_096.ab1 OA ... 452 e-124
gb|CF292148.1|CF292148 14ROOT--02-N19.b1 Rice root plasmid ... 448 e-123
gb|CF291164.1|CF291164 14ROOT--01-H18.g1 Rice root plasmid ... 446 e-123
gb|CF292040.1|CF292040 14ROOT--02-L10.b1 Rice root plasmid ... 446 e-123
gb|CV730234.1|CV730234 FLO--03-K21.g1 Rice flower lambda ph... 446 e-123
gb|AACV01000194.1| Oryza sativa (japonica cultivar-group) c... 446 e-123
ref|NM_184371.1| Oryza sativa (japonica cultivar-group), mRNA 446 e-123
gb|AU031069.1|AU031069 AU031069 Rice cDNA from immature lea... 442 e-121
gb|AU082356.1|AU082356 AU082356 Rice callus Oryza sativa (j... 440 e-121
gb|AU097668.1|AU097668 AU097668 Rice callus Oryza sativa (j... 440 e-121
gb|CF291163.1|CF291163 14ROOT--01-H18.b1 Rice root plasmid ... 440 e-121
gb|CF292090.1|CF292090 14ROOT--02-M12.g1 Rice root plasmid ... 440 e-121
gb|CV733415.1|CV733415 FLO--08-F04.g1 Rice flower lambda ph... 440 e-121
gb|AU057602.2|AU057602 AU057602 Oryza sativa mature leaf Ni... 440 e-121
ref|NM_184405.1| Oryza sativa (japonica cultivar-group), mRNA 440 e-121
gb|CV730588.1|CV730588 FLO--04-D06.b1 Rice flower lambda ph... 438 e-120
gb|CV732516.1|CV732516 FLO--07-A10.b1 Rice flower lambda ph... 438 e-120
gb|CF333577.1|CF333577 JMT--02-I13.b1 AtJMT-overexpressing ... 436 e-120
gb|AU057603.1|AU057603 AU057603 Oryza sativa mature leaf Ni... 434 e-119
gb|AU082347.1|AU082347 AU082347 Rice callus Oryza sativa (j... 434 e-119
gb|AU082408.1|AU082408 AU082408 Rice panicle shorter than 3... 432 e-118
gb|CF292189.1|CF292189 14ROOT--02-O19.b1 Rice root plasmid ... 432 e-118
gb|CV728820.1|CV728820 FLO--01-F13.b1 Rice flower lambda ph... 432 e-118
gb|AACV01000209.1| Oryza sativa (japonica cultivar-group) c... 432 e-118
gb|AU031294.1|AU031294 AU031294 Rice cDNA from immature lea... 430 e-118
gb|C73984.2|C73984 C73984 Rice panicle shorter than 3cm Ory... 430 e-118
gb|CF290908.1|CF290908 14ROOT--01-B24.g1 Rice root plasmid ... 430 e-118
ref|NM_184399.1| Oryza sativa (japonica cultivar-group), mRNA 430 e-118
gb|CV728225.1|CV728225 14Salt--06-N03.g1 Salt treated rice ... 428 e-117
gb|AU097681.1|AU097681 AU097681 Rice root Oryza sativa (jap... 426 e-117
gb|CF291302.1|CF291302 14ROOT--01-K20.b1 Rice root plasmid ... 426 e-117
gb|CF297134.1|CF297134 30DGS--07-M18.b1 Rice leaf plasmid c... 426 e-117
gb|AU031202.1|AU031202 AU031202 Rice cDNA from immature lea... 424 e-116
gb|AU097675.1|AU097675 AU097675 Rice immature leaf includin... 424 e-116
gb|CV729266.1|CV729266 FLO--02-A05.b1 Rice flower lambda ph... 424 e-116
gb|AU183294.1|AU183294 AU183294 Rice cDNA from immature lea... 420 e-115
gb|AU030153.2|AU030153 AU030153 Rice cDNA from immature lea... 420 e-115
gb|CF281520.1|CF281520 14ETL--08-J17.b1 Rice etiolated leaf... 418 e-114
gb|CV731643.1|CV731643 FLO--05-M07.g1 Rice flower lambda ph... 418 e-114
gb|CB661775.1|CB661775 OSJNEd05B14.f OSJNEd Oryza sativa (j... 416 e-114
gb|CF334827.1|CF334827 JMT--04-E05.b1 AtJMT-overexpressing ... 416 e-114
gb|CO435616.1|CO435616 OsMR682 5MT resistant rice mutant cD... 416 e-114
gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbar... 416 e-114
gb|AACV01006345.1| Oryza sativa (japonica cultivar-group) c... 416 e-114
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 416 e-114
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 416 e-114
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 416 e-114
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 416 e-114
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 416 e-114
gb|CF281757.1|CF281757 14ETL--08-P04.b1 Rice etiolated leaf... 414 e-113
gb|CF290907.1|CF290907 14ROOT--01-B24.b1 Rice root plasmid ... 414 e-113
gb|CF291327.1|CF291327 14ROOT--01-L08.g1 Rice root plasmid ... 414 e-113
gb|AU092503.1|AU092503 AU092503 Rice callus Oryza sativa (j... 412 e-112
gb|CF296221.1|CF296221 30DGS--06-H23.b1 Rice leaf plasmid c... 412 e-112
gb|CV730589.1|CV730589 FLO--04-D06.g1 Rice flower lambda ph... 412 e-112
gb|AACV01000214.1| Oryza sativa (japonica cultivar-group) c... 412 e-112
ref|NM_184403.1| Oryza sativa (japonica cultivar-group), mRNA 412 e-112
gb|AU097671.1|AU097671 AU097671 Rice panicle shorter than 3... 410 e-112
gb|CV728821.1|CV728821 FLO--01-F13.g1 Rice flower lambda ph... 410 e-112
gb|AU029435.1|AU029435 AU029435 Rice panicle shorter than 3... 408 e-111
gb|AU058394.1|AU058394 AU058394 Oryza sativa Nipponbare imm... 408 e-111
gb|AU068669.1|AU068669 AU068669 Rice callus Oryza sativa (j... 408 e-111
gb|AU068670.1|AU068670 AU068670 Rice callus Oryza sativa (j... 408 e-111
gb|AU076129.1|AU076129 AU076129 Rice panicle shorter than 3... 408 e-111
gb|AU097672.1|AU097672 AU097672 Rice panicle shorter than 3... 408 e-111
gb|AU097674.1|AU097674 AU097674 Rice immature leaf includin... 408 e-111
gb|CF290925.1|CF290925 14ROOT--01-C11.g1 Rice root plasmid ... 408 e-111
gb|CF318598.1|CF318598 HD--08-M15.g1 OsHDAC1-overexpressing... 408 e-111
gb|CF338483.1|CF338483 RCL1--01-N06.g1 Regenerated callus l... 408 e-111
gb|CF338741.1|CF338741 RCL1--02-K06.g1 Regenerated callus l... 408 e-111
gb|CF339512.1|CF339512 RCL1--05-B11.g1 Regenerated callus l... 408 e-111
gb|CF339642.1|CF339642 RCL1--05-I03.g1 Regenerated callus l... 408 e-111
gb|CF339736.1|CF339736 RCL1--05-M18.g1 Regenerated callus l... 408 e-111
gb|CF339787.1|CF339787 RCL1--05-O24.g1 Regenerated callus l... 408 e-111
gb|CF340036.1|CF340036 RCL1--06-M03.g1 Regenerated callus l... 408 e-111
gb|CF340228.1|CF340228 RCL1--07-F18.g1 Regenerated callus l... 408 e-111
gb|CF340525.1|CF340525 RCL1--08-E24.g1 Regenerated callus l... 408 e-111
gb|CF340729.1|CF340729 RCL1--08-P04.g1 Regenerated callus l... 408 e-111
gb|CV731425.1|CV731425 FLO--05-H09.b1 Rice flower lambda ph... 408 e-111
dbj|AP004620.3| Oryza sativa (japonica cultivar-group) geno... 408 e-111
gb|AACV01018772.1| Oryza sativa (japonica cultivar-group) c... 408 e-111
ref|XM_483094.1| Oryza sativa (japonica cultivar-group), mRNA 408 e-111
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 408 e-111
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 408 e-111
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 408 e-111
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 408 e-111
gb|AU029407.1|AU029407 AU029407 Rice panicle shorter than 3... 406 e-111
gb|CV724027.1|CV724027 root--05-J06.g1 Rice root lambda pha... 406 e-111
gb|AU097677.1|AU097677 AU097677 Rice cDNA from immature lea... 404 e-110
gb|CA756225.1|CA756225 BR030038000_PLATE_A05_33_035.ab1 OA ... 404 e-110
gb|CF279531.1|CF279531 14ETL--05-N20.b1 Rice etiolated leaf... 404 e-110
gb|CV728989.1|CV728989 FLO--01-J16.g1 Rice flower lambda ph... 404 e-110
gb|CV727429.1|CV727429 14Salt--05-J04.b1 Salt treated rice ... 402 e-109
gb|CV733073.1|CV733073 FLO--07-N06.b1 Rice flower lambda ph... 402 e-109
gb|CF280347.1|CF280347 14ETL--06-P18.b1 Rice etiolated leaf... 400 e-109
gb|CF291429.1|CF291429 14ROOT--01-N15.b1 Rice root plasmid ... 400 e-109
gb|CF313968.1|CF313968 HD--02-E24.g1 OsHDAC1-overexpressing... 400 e-109
gb|CV725853.1|CV725853 14Salt--03-C23.b1 Salt treated rice ... 400 e-109
gb|CV728178.1|CV728178 14Salt--06-L23.b1 Salt treated rice ... 400 e-109
gb|C27274.1|C27274 C27274 Rice callus cDNA Oryza sativa (ja... 398 e-108
gb|CV725979.1|CV725979 14Salt--03-G01.b1 Salt treated rice ... 398 e-108
gb|CV729896.1|CV729896 FLO--03-C19.b1 Rice flower lambda ph... 398 e-108
gb|AU182734.1|AU182734 AU182734 Rice panicle shorter than 3... 396 e-108
gb|CV731986.1|CV731986 FLO--06-E06.b1 Rice flower lambda ph... 396 e-108
gb|CF281758.1|CF281758 14ETL--08-P04.g1 Rice etiolated leaf... 394 e-107
gb|CF292089.1|CF292089 14ROOT--02-M12.b1 Rice root plasmid ... 394 e-107
gb|CF333474.1|CF333474 JMT--02-G04.g1 AtJMT-overexpressing ... 394 e-107
gb|CF338330.1|CF338330 RCL1--01-F18.g1 Regenerated callus l... 394 e-107
gb|CF340422.1|CF340422 RCL1--07-P17.g1 Regenerated callus l... 394 e-107
gb|CV733163.1|CV733163 FLO--07-P07.b1 Rice flower lambda ph... 394 e-107
gb|CV734119.1|CV734119 FLO--09-F11.b1 Rice flower lambda ph... 394 e-107
gb|AU076128.1|AU076128 AU076128 Rice panicle shorter than 3... 392 e-106
gb|CV725902.1|CV725902 14Salt--03-E01.b1 Salt treated rice ... 391 e-106
gb|AU097683.1|AU097683 AU097683 Rice cDNA from young root O... 389 e-105
gb|CV727985.1|CV727985 14Salt--06-G22.b1 Salt treated rice ... 389 e-105
gb|CF292149.1|CF292149 14ROOT--02-N19.g1 Rice root plasmid ... 387 e-105
gb|CV732517.1|CV732517 FLO--07-A10.g1 Rice flower lambda ph... 387 e-105
gb|AU097680.2|AU097680 AU097680 Rice root Oryza sativa (jap... 387 e-105
gb|CV729459.1|CV729459 FLO--02-F22.b1 Rice flower lambda ph... 383 e-103
gb|CV729191.1|CV729191 FLO--01-O12.b1 Rice flower lambda ph... 381 e-103
gb|CV729210.1|CV729210 FLO--01-O23.b1 Rice flower lambda ph... 381 e-103
gb|CF339471.1|CF339471 RCL1--04-P13.g1 Regenerated callus l... 379 e-102
gb|CV725854.1|CV725854 14Salt--03-C23.g1 Salt treated rice ... 379 e-102
gb|AU070851.1|AU070851 AU070851 Rice cDNA from young root O... 377 e-102
gb|CF291303.1|CF291303 14ROOT--01-K20.g1 Rice root plasmid ... 377 e-102
gb|CF338869.1|CF338869 RCL1--03-A13.g1 Regenerated callus l... 377 e-102
gb|CF340382.1|CF340382 RCL1--07-N17.g1 Regenerated callus l... 377 e-102
gb|CF340744.1|CF340744 RCL1--08-P20.g1 Regenerated callus l... 377 e-102
gb|AU097670.1|AU097670 AU097670 Rice panicle (longer than 1... 375 e-101
gb|AU174701.1|AU174701 AU174701 Rice cDNA from leaf Oryza s... 375 e-101
gb|CV732640.1|CV732640 FLO--07-D08.b1 Rice flower lambda ph... 375 e-101
gb|AACV01002648.1| Oryza sativa (japonica cultivar-group) c... 375 e-101
ref|NM_190523.1| Oryza sativa (japonica cultivar-group), p... 375 e-101
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 375 e-101
dbj|AP003231.3| Oryza sativa (japonica cultivar-group) geno... 375 e-101
dbj|AP003241.3| Oryza sativa (japonica cultivar-group) geno... 375 e-101
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 375 e-101
gb|C74070.1|C74070 C74070 Rice panicle shorter than 3cm Ory... 369 2e-099
gb|AU065894.1|AU065894 AU065894 Rice green shoot Oryza sati... 369 2e-099
gb|AU064314.2|AU064314 AU064314 Rice panicle (longer than 1... 367 6e-099
gb|CF292220.1|CF292220 14ROOT--02-P12.g1 Rice root plasmid ... 367 6e-099
gb|CV727430.1|CV727430 14Salt--05-J04.g1 Salt treated rice ... 367 6e-099
gb|CV731642.1|CV731642 FLO--05-M07.b1 Rice flower lambda ph... 367 6e-099
gb|CV727136.1|CV727136 14Salt--05-C06.b1 Salt treated rice ... 365 2e-098
gb|CV729874.1|CV729874 FLO--03-C07.b1 Rice flower lambda ph... 363 1e-097
gb|CV725903.1|CV725903 14Salt--03-E01.g1 Salt treated rice ... 361 4e-097
gb|CV726600.1|CV726600 14Salt--04-F09.g1 Salt treated rice ... 361 4e-097
gb|CV729576.1|CV729576 FLO--02-J14.b1 Rice flower lambda ph... 361 4e-097
gb|AU091836.1|AU091836 AU091836 Rice callus Oryza sativa (j... 359 2e-096
gb|AU182176.1|AU182176 AU182176 Rice callus (2001) Oryza sa... 359 2e-096
gb|CF325670.1|CF325670 JMT1--03-N20.g1 AtJMT-overexpressing... 359 2e-096
gb|CV731426.1|CV731426 FLO--05-H09.g1 Rice flower lambda ph... 359 2e-096
gb|CV733685.1|CV733685 FLO--08-L10.g1 Rice flower lambda ph... 359 2e-096
gb|CV734351.1|CV734351 FLO--09-K18.g1 Rice flower lambda ph... 359 2e-096
gb|CV728663.1|CV728663 FLO--01-B21.g1 Rice flower lambda ph... 357 6e-096
gb|CV731958.1|CV731958 FLO--06-D15.g1 Rice flower lambda ph... 357 6e-096
gb|CF293431.1|CF293431 30DGS--02-J22.g1 Rice leaf plasmid c... 355 2e-095
gb|AZ130708.1|AZ130708 OSJNBb0062D13f CUGI Rice BAC Library... 353 1e-094
gb|CV725419.1|CV725419 14Salt--02-H24.g1 Salt treated rice ... 353 1e-094
gb|CV731557.1|CV731557 FLO--05-K07.g1 Rice flower lambda ph... 353 1e-094
gb|AU062984.1|AU062984 AU062984 Rice callus Oryza sativa (j... 351 4e-094
gb|CV734434.1|CV734434 FLO--09-M20.g1 Rice flower lambda ph... 351 4e-094
gb|AU097676.1|AU097676 AU097676 Rice immature leaf includin... 347 6e-093
gb|AU075448.1|AU075448 AU075448 Rice cDNA from immature lea... 345 2e-092
gb|CV727137.1|CV727137 14Salt--05-C06.g1 Salt treated rice ... 345 2e-092
gb|AQ362504.2|AQ362504 nbxb0050G11f CUGI Rice BAC Library O... 343 9e-092
gb|CF293430.1|CF293430 30DGS--02-J22.b1 Rice leaf plasmid c... 343 9e-092
gb|CV731556.1|CV731556 FLO--05-K07.b1 Rice flower lambda ph... 343 9e-092
gb|AACV01001262.1| Oryza sativa (japonica cultivar-group) c... 343 9e-092
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 343 9e-092
dbj|AP003144.1| Oryza sativa (japonica cultivar-group) geno... 343 9e-092
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 343 9e-092
gb|C97158.1|C97158 C97158 Rice callus Oryza sativa (japonic... 341 4e-091
gb|CV721027.1|CV721027 YBH--02-K11.b1 Rice before heading y... 341 4e-091
gb|CV729931.1|CV729931 FLO--03-D14.g1 Rice flower lambda ph... 339 1e-090
gb|CV732641.1|CV732641 FLO--07-D08.g1 Rice flower lambda ph... 339 1e-090
gb|CV734350.1|CV734350 FLO--09-K18.b1 Rice flower lambda ph... 335 2e-089
gb|AC117265.2| Oryza sativa (japonica cultivar-group) chrom... 335 2e-089
gb|AACV01012349.1| Oryza sativa (japonica cultivar-group) c... 335 2e-089
ref|XM_475367.1| Oryza sativa (japonica cultivar-group), p... 335 2e-089
ref|NT_107213.1| Oryza sativa (japonica cultivar-group) 335 2e-089
gb|CV729192.1|CV729192 FLO--01-O12.g1 Rice flower lambda ph... 333 9e-089
gb|CV731957.1|CV731957 FLO--06-D15.b1 Rice flower lambda ph... 331 3e-088
gb|CV723677.1|CV723677 root--04-G10.g1 Rice root lambda pha... 329 1e-087
gb|CV729577.1|CV729577 FLO--02-J14.g1 Rice flower lambda ph... 329 1e-087
gb|CV720894.1|CV720894 YBH--02-D09.b1 Rice before heading y... 327 5e-087
gb|CV721437.1|CV721437 YBH--04-C03.b1 Rice before heading y... 327 5e-087
gb|CV721456.1|CV721456 YBH--04-D02.b1 Rice before heading y... 327 5e-087
gb|CF292228.1|CF292228 14ROOT--02-P16.g1 Rice root plasmid ... 323 8e-086
gb|CF292041.1|CF292041 14ROOT--02-L10.g1 Rice root plasmid ... 321 3e-085
gb|AU031162.1|AU031162 AU031162 Rice cDNA from immature lea... 319 1e-084
gb|C74089.1|C74089 C74089 Rice panicle shorter than 3cm Ory... 317 5e-084
gb|CV734120.1|CV734120 FLO--09-F11.g1 Rice flower lambda ph... 313 8e-083
gb|AU063158.1|AU063158 AU063158 Rice callus Oryza sativa (j... 311 3e-082
gb|CF292219.1|CF292219 14ROOT--02-P12.b1 Rice root plasmid ... 311 3e-082
gb|CF290948.1|CF290948 14ROOT--01-D01.g1 Rice root plasmid ... 309 1e-081
gb|AU095013.1|AU095013 AU095013 Rice immature leaf includin... 307 5e-081
gb|D22681.1|D22681 RICC0893A Rice callus Oryza sativa (japo... 305 2e-080
gb|CV729413.1|CV729413 FLO--02-E17.b1 Rice flower lambda ph... 305 2e-080
gb|CV733414.1|CV733414 FLO--08-F04.b1 Rice flower lambda ph... 305 2e-080
gb|CV720821.1|CV720821 YBH--01-P10.b1 Rice before heading y... 299 1e-078
gb|CV733074.1|CV733074 FLO--07-N06.g1 Rice flower lambda ph... 299 1e-078
gb|CF281521.1|CF281521 14ETL--08-J17.g1 Rice etiolated leaf... 297 5e-078
gb|AU172806.1|AU172806 AU172806 Rice panicle shorter than 3... 295 2e-077
gb|AU057673.1|AU057673 AU057673 Oryza sativa mature leaf Ni... 293 8e-077
gb|CA999413.1|CA999413 S234H_C02 Rice cold stress germinati... 289 1e-075
gb|AU225174.1|AU225174 AU225174 Oryza sativa Koshihikari pi... 287 5e-075
gb|CF312627.1|CF312627 ABF--08-H11.g1 ABF3-overexpressing t... 280 1e-072
gb|C97239.1|C97239 C97239 Rice callus Oryza sativa (japonic... 268 4e-069
gb|CF290924.1|CF290924 14ROOT--01-C11.b1 Rice root plasmid ... 268 4e-069
gb|AU092764.1|AU092764 AU092764 Rice callus Oryza sativa (j... 266 2e-068
gb|CV733085.1|CV733085 FLO--07-N13.g1 Rice flower lambda ph... 264 7e-068
gb|CV733684.1|CV733684 FLO--08-L10.b1 Rice flower lambda ph... 264 7e-068
gb|C98207.1|C98207 C98207 Rice callus Oryza sativa (japonic... 252 3e-064
gb|AQ157995.1|AQ157995 nbxb0010O24f CUGI Rice BAC Library O... 248 4e-063
gb|C97210.1|C97210 C97210 Rice callus Oryza sativa (japonic... 248 4e-063
gb|D24618.1|D24618 RICR2259A Rice root Oryza sativa (japoni... 230 9e-058
gb|AU070557.1|AU070557 AU070557 Rice shoot Oryza sativa (ja... 226 1e-056
gb|AU097669.1|AU097669 AU097669 Rice callus Oryza sativa (j... 224 6e-056
gb|CV728224.1|CV728224 14Salt--06-N03.b1 Salt treated rice ... 222 2e-055
gb|D25082.1|D25082 RICR3125A Rice root Oryza sativa (japoni... 216 1e-053
gb|D48146.2|D48146 RICS14215A Rice green shoot Oryza sativa... 214 6e-053
gb|D49215.1|D49215 RICS16333A Rice green shoot Oryza sativa... 212 2e-052
gb|AU095590.1|AU095590 AU095590 Rice cDNA from young root O... 212 2e-052
gb|CF280348.1|CF280348 14ETL--06-P18.g1 Rice etiolated leaf... 210 9e-052
gb|CV731377.1|CV731377 FLO--05-G05.g1 Rice flower lambda ph... 210 9e-052
gb|C97157.1|C97157 C97157 Rice callus Oryza sativa (japonic... 208 3e-051
gb|CF277856.1|CF277856 14ETL--03-I19.b1 Rice etiolated leaf... 208 3e-051
gb|CV728988.1|CV728988 FLO--01-J16.b1 Rice flower lambda ph... 208 3e-051
gb|AU062949.2|AU062949 AU062949 Rice callus Oryza sativa (j... 200 8e-049
gb|AQ868678.1|AQ868678 nbeb0030B11r CUGI Rice BAC Library (... 196 1e-047
gb|D23591.1|D23591 RICC3057A Rice callus Oryza sativa (japo... 190 8e-046
gb|CV725777.1|CV725777 14Salt--03-B01.g1 Salt treated rice ... 190 8e-046
gb|C73966.1|C73966 C73966 Rice panicle shorter than 3cm Ory... 188 3e-045
gb|D22526.1|D22526 RICC0138B Rice callus Oryza sativa (japo... 184 5e-044
gb|AU184845.1|AU184845 AU184845 Rice cDNA from young root O... 180 8e-043
gb|CF277857.1|CF277857 14ETL--03-I19.g1 Rice etiolated leaf... 180 8e-043
gb|CV731376.1|CV731376 FLO--05-G05.b1 Rice flower lambda ph... 180 8e-043
gb|AU058172.1|AU058172 AU058172 Oryza sativa Nipponbare imm... 178 3e-042
gb|CF339158.1|CF339158 RCL1--03-P11.g1 Regenerated callus l... 178 3e-042
gb|AU082915.1|AU082915 AU082915 Rice callus Oryza sativa (j... 174 5e-041
gb|C27926.1|C27926 C27926 Rice callus cDNA Oryza sativa (ja... 172 2e-040
dbj|AK059159.1| Oryza sativa (japonica cultivar-group) cDNA... 172 2e-040
gb|D40363.1|D40363 RICS2285A Rice shoot Oryza sativa (japon... 170 8e-040
gb|AU058305.1|AU058305 AU058305 Oryza sativa Nipponbare imm... 170 8e-040
gb|D47132.1|D47132 RICS12273A Rice green shoot Oryza sativa... 168 3e-039
gb|CF315774.1|CF315774 HD--04-N03.b1 OsHDAC1-overexpressing... 168 3e-039
gb|AU064441.1|AU064441 AU064441 Rice panicle shorter than 3... 161 7e-037
gb|C27000.1|C27000 C27000 Rice callus cDNA Oryza sativa (ja... 159 3e-036
gb|D15624.1|D15624 RICC0972A Rice callus Oryza sativa (japo... 159 3e-036
gb|CF334828.1|CF334828 JMT--04-E05.g1 AtJMT-overexpressing ... 159 3e-036
gb|D22527.1|D22527 RICC0138A Rice callus Oryza sativa (japo... 155 4e-035
gb|C74202.1|C74202 C74202 Rice panicle shorter than 3cm Ory... 153 2e-034
gb|AU029901.1|AU029901 AU029901 Rice cDNA from immature lea... 151 7e-034
gb|CV729554.1|CV729554 FLO--02-I20.b1 Rice flower lambda ph... 149 3e-033
gb|AU062423.1|AU062423 AU062423 Rice callus Oryza sativa (j... 145 4e-032
gb|AU096554.1|AU096554 AU096554 Rice green shoot Oryza sati... 145 4e-032
gb|C27445.1|C27445 C27445 Rice callus cDNA Oryza sativa (ja... 143 2e-031
gb|D23918.1|D23918 RICR0573A Rice root Oryza sativa (japoni... 143 2e-031
gb|AU030152.1|AU030152 AU030152 Rice cDNA from immature lea... 141 7e-031
gb|AU058177.1|AU058177 AU058177 Oryza sativa Nipponbare imm... 137 1e-029
gb|CF278595.1|CF278595 14ETL--04-I24.g1 Rice etiolated leaf... 137 1e-029
gb|C74145.1|C74145 C74145 Rice panicle shorter than 3cm Ory... 135 4e-029
gb|CV730130.1|CV730130 FLO--03-I07.b1 Rice flower lambda ph... 131 7e-028
gb|AU174702.1|AU174702 AU174702 Rice cDNA from leaf Oryza s... 127 1e-026
gb|AU064386.1|AU064386 AU064386 Rice panicle shorter than 3... 117 1e-023
gb|AU062951.1|AU062951 AU062951 Rice callus Oryza sativa (j... 113 2e-022
gb|CV729460.1|CV729460 FLO--02-F22.g1 Rice flower lambda ph... 113 2e-022
dbj|AK108119.1| Oryza sativa (japonica cultivar-group) cDNA... 111 6e-022
gb|AU063733.1|AU063733 AU063733 Rice callus Oryza sativa (j... 109 2e-021
gb|CV733627.1|CV733627 FLO--08-K01.g1 Rice flower lambda ph... 107 9e-021
gb|AU097667.1|AU097667 AU097667 Rice callus Oryza sativa (j... 105 4e-020
gb|D23468.1|D23468 RICC2857A Rice callus Oryza sativa (japo... 103 1e-019
gb|D23046.1|D23046 RICC2090A Rice callus Oryza sativa (japo... 101 6e-019
gb|CV725556.1|CV725556 14Salt--02-L07.b1 Salt treated rice ... 96 4e-017
gb|C74297.1|C74297 C74297 Rice panicle shorter than 3cm Ory... 92 6e-016
gb|CV729930.1|CV729930 FLO--03-D14.b1 Rice flower lambda ph... 90 2e-015
gb|C97215.2|C97215 C97215 Rice callus Oryza sativa (japonic... 88 9e-015
dbj|AP003918.3| Oryza sativa (japonica cultivar-group) geno... 76 3e-011
gb|AACV01017940.1| Oryza sativa (japonica cultivar-group) c... 76 3e-011
dbj|AP005390.2| Oryza sativa (japonica cultivar-group) geno... 76 3e-011
gb|AU097666.1|AU097666 AU097666 Rice callus Oryza sativa (j... 74 1e-010
dbj|AP004558.3| Oryza sativa (japonica cultivar-group) geno... 74 1e-010
dbj|AP004665.4| Oryza sativa (japonica cultivar-group) geno... 74 1e-010
gb|AACV01018587.1| Oryza sativa (japonica cultivar-group) c... 74 1e-010
gb|AC137921.2| Oryza sativa chromosome 3 BAC OSJNBa0027H16 ... 70 2e-009
gb|AC129224.2| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
gb|AC120888.2| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
ref|NT_107135.1| Oryza sativa (japonica cultivar-group) 70 2e-009
gb|AACV01007221.1| Oryza sativa (japonica cultivar-group) c... 70 2e-009
gb|AACV01020975.1| Oryza sativa (japonica cultivar-group) c... 70 2e-009
gb|AACV01023698.1| Oryza sativa (japonica cultivar-group) c... 70 2e-009
ref|NT_080061.1| Oryza sativa (japonica cultivar-group) chr... 70 2e-009
ref|XM_463083.1| Oryza sativa (japonica cultivar-group), mRNA 70 2e-009
ref|XM_482672.1| Oryza sativa (japonica cultivar-group), mRNA 70 2e-009
ref|NT_107174.1| Oryza sativa (japonica cultivar-group) 70 2e-009
gb|CH401266.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
gb|CH401245.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
gb|CF279284.1|CF279284 14ETL--05-I13.b1 Rice etiolated leaf... 68 8e-009
gb|CV727986.1|CV727986 14Salt--06-G22.g1 Salt treated rice ... 68 8e-009
dbj|AK106505.1| Oryza sativa (japonica cultivar-group) cDNA... 68 8e-009
ref|NT_107078.1| Oryza sativa (japonica cultivar-group) 68 8e-009
dbj|AP006162.2| Oryza sativa (japonica cultivar-group) geno... 68 8e-009
gb|AACV01020566.1| Oryza sativa (japonica cultivar-group) c... 68 8e-009
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 68 8e-009
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 68 8e-009
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 68 8e-009
gb|AQ161058.1|AQ161058 nbxb0006M04f CUGI Rice BAC Library O... 66 3e-008
gb|AC135914.2| Oryza sativa (japonica cultivar-group) chrom... 66 3e-008
gb|AC136226.2| Oryza sativa (japonica cultivar-group) chrom... 66 3e-008
gb|AACV01002319.1| Oryza sativa (japonica cultivar-group) c... 66 3e-008
gb|AACV01011154.1| Oryza sativa (japonica cultivar-group) c... 66 3e-008
ref|NT_107225.1| Oryza sativa (japonica cultivar-group) 66 3e-008
dbj|AP002972.3| Oryza sativa (japonica cultivar-group) geno... 66 3e-008
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 66 3e-008
dbj|AP005069.2| Oryza sativa (japonica cultivar-group) geno... 64 1e-007
ref|NT_107237.1| Oryza sativa (japonica cultivar-group) 64 1e-007
dbj|AP006164.2| Oryza sativa (japonica cultivar-group) geno... 64 1e-007
dbj|AP006166.3| Oryza sativa (japonica cultivar-group) geno... 64 1e-007
gb|AACV01013677.1| Oryza sativa (japonica cultivar-group) c... 64 1e-007
gb|AACV01020855.1| Oryza sativa (japonica cultivar-group) c... 64 1e-007
ref|NT_107179.1| Oryza sativa (japonica cultivar-group) 64 1e-007
gb|CH401210.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 64 1e-007
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 64 1e-007
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 64 1e-007
gb|D39530.1|D39530 RICS0937A Rice shoot Oryza sativa (japon... 60 2e-006
emb|AL731874.4|CNS08C8E Oryza sativa chromosome 12, . BAC O... 60 2e-006
gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbar... 60 2e-006
ref|NT_079833.2| Oryza sativa (japonica cultivar-group) 60 2e-006
ref|NT_079878.2| Oryza sativa (japonica cultivar-group) 60 2e-006
dbj|AP005929.3| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
gb|AACV01006503.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
gb|AACV01011256.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
gb|AACV01014110.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
gb|CH401214.1| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
gb|CH401192.1| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
gb|CF315294.1|CF315294 HD--04-C15.b1 OsHDAC1-overexpressing... 58 8e-006
gb|CF279532.1|CF279532 14ETL--05-N20.g1 Rice etiolated leaf... 56 3e-005
gb|CF338670.1|CF338670 RCL1--02-G18.g1 Regenerated callus l... 56 3e-005
gb|AACV01019447.1| Oryza sativa (japonica cultivar-group) c... 56 3e-005
gb|AACV01021331.1| Oryza sativa (japonica cultivar-group) c... 56 3e-005
ref|NT_080065.1| Oryza sativa (japonica cultivar-group) chr... 56 3e-005
ref|NT_107079.1| Oryza sativa (japonica cultivar-group) 56 3e-005
dbj|AP005839.3| Oryza sativa (japonica cultivar-group) geno... 56 3e-005
gb|CH401253.1| Oryza sativa (japonica cultivar-group) chrom... 56 3e-005
gb|CH401241.1| Oryza sativa (japonica cultivar-group) chrom... 56 3e-005
gb|AC083945.3| Oryza sativa (japonica cultivar-group) chrom... 56 3e-005
gb|AC108883.1| Genomic sequence for (japonica cultivar-grou... 54 1e-004
gb|AC145127.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
dbj|AP004461.3| Oryza sativa (japonica cultivar-group) geno... 54 1e-004
gb|AC134256.4| Oryza sativa (japonica cultivar-group), comp... 54 1e-004
gb|AC134341.2| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
dbj|AP005740.3| Oryza sativa (japonica cultivar-group) geno... 54 1e-004
ref|NT_107091.1| Oryza sativa (japonica cultivar-group), co... 54 1e-004
gb|AACV01005126.1| Oryza sativa (japonica cultivar-group) c... 54 1e-004
gb|AACV01008409.1| Oryza sativa (japonica cultivar-group) c... 54 1e-004
gb|AACV01010945.1| Oryza sativa (japonica cultivar-group) c... 54 1e-004
gb|AACV01017271.1| Oryza sativa (japonica cultivar-group) c... 54 1e-004
gb|AACV01023287.1| Oryza sativa (japonica cultivar-group) c... 54 1e-004
gb|AACV01025707.1| Oryza sativa (japonica cultivar-group) C... 54 1e-004
ref|NT_080060.1| Oryza sativa (japonica cultivar-group) chr... 54 1e-004
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 54 1e-004
ref|NT_107194.1| Oryza sativa (japonica cultivar-group) 54 1e-004
dbj|AP004160.2| Oryza sativa (japonica cultivar-group) geno... 54 1e-004
dbj|AP005885.3| Oryza sativa (japonica cultivar-group) geno... 54 1e-004
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 54 1e-004
gb|CH401300.1| Oryza sativa (japonica cultivar-group) scaff... 54 1e-004
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
gb|CH401182.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
emb|AL606642.3|OSJN00073 Oryza sativa genomic DNA, chromoso... 54 1e-004
gb|AC166065.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 54 1e-004
gb|AC079632.4| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
emb|AL831801.4|CNS08CAE Oryza sativa chromosome 12, . BAC O... 52 5e-004
gb|AC139174.3| Oryza sativa chromosome 3 BAC OSJNBb0065L20 ... 52 5e-004
dbj|AP005286.3| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
dbj|AP005532.3| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
dbj|AP003808.3| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
gb|AACV01003979.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
gb|AACV01004890.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
gb|AACV01007551.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
gb|AACV01016138.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
gb|AACV01024399.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
ref|NT_107185.1| Oryza sativa (japonica cultivar-group) 52 5e-004
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 52 5e-004
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 52 5e-004
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 52 5e-004
gb|CH401274.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
gb|AQ870965.1|AQ870965 nbeb0041J05r CUGI Rice BAC Library (... 50 0.002
gb|AC104714.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|AC104715.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|AC087851.4|AC087851 Oryza sativa chromosome 3 BAC OSJNBb... 50 0.002
gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 ... 50 0.002
gb|AC130603.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|AACV01007661.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01007758.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01012563.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01012890.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
dbj|AP002837.2| Oryza sativa (japonica cultivar-group) geno... 50 0.002
ref|NT_107217.1| Oryza sativa (japonica cultivar-group) 50 0.002
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 50 0.002
dbj|AP001389.1| Oryza sativa (japonica cultivar-group) geno... 50 0.002
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 50 0.002
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|AC130727.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.008
gb|AC130728.2| Oryza sativa (japonica cultivar-group) chrom... 48 0.008
gb|AC108501.2| Oryza sativa (japonica cultivar-group) chrom... 48 0.008
ref|NT_107211.1| Oryza sativa (japonica cultivar-group) 48 0.008
gb|AACV01012051.1| Oryza sativa (japonica cultivar-group) c... 48 0.008
gb|AACV01012819.1| Oryza sativa (japonica cultivar-group) c... 48 0.008
gb|AACV01018168.1| Oryza sativa (japonica cultivar-group) c... 48 0.008
gb|AC136217.4| Oryza sativa (japonica cultivar-group) chrom... 48 0.008
dbj|AP004574.3| Oryza sativa (japonica cultivar-group) geno... 48 0.008
dbj|AP005491.3| Oryza sativa (japonica cultivar-group) geno... 48 0.008
gb|AC165371.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.008
gb|CF313652.1|CF313652 HD--01-N17.b1 OsHDAC1-overexpressing... 46 0.030
dbj|AP004661.3| Oryza sativa (japonica cultivar-group) geno... 46 0.030
gb|AC123524.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.030
dbj|AP004554.3| Oryza sativa (japonica cultivar-group) geno... 46 0.030
dbj|AP004884.3| Oryza sativa (japonica cultivar-group) geno... 46 0.030
dbj|AP005820.3| Oryza sativa (japonica cultivar-group) geno... 46 0.030
dbj|AP004801.3| Oryza sativa (japonica cultivar-group) geno... 46 0.030
ref|NT_107119.1| Oryza sativa (japonica cultivar-group) 46 0.030
ref|NT_107144.1| Oryza sativa (japonica cultivar-group) 46 0.030
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 46 0.030
dbj|AP002953.2| Oryza sativa (japonica cultivar-group) geno... 46 0.030
dbj|AP003622.3| Oryza sativa (japonica cultivar-group) geno... 46 0.030
gb|AACV01000906.1| Oryza sativa (japonica cultivar-group) c... 46 0.030
gb|AACV01001477.1| Oryza sativa (japonica cultivar-group) c... 46 0.030
gb|AACV01003786.1| Oryza sativa (japonica cultivar-group) c... 46 0.030
gb|AACV01004309.1| Oryza sativa (japonica cultivar-group) c... 46 0.030
gb|AACV01013044.1| Oryza sativa (japonica cultivar-group) c... 46 0.030
gb|AACV01014439.1| Oryza sativa (japonica cultivar-group) c... 46 0.030
gb|AACV01018073.1| Oryza sativa (japonica cultivar-group) c... 46 0.030
gb|AACV01019132.1| Oryza sativa (japonica cultivar-group) c... 46 0.030
gb|AACV01022622.1| Oryza sativa (japonica cultivar-group) c... 46 0.030
gb|AACV01022882.1| Oryza sativa (japonica cultivar-group) c... 46 0.030
gb|AACV01029660.1| Oryza sativa (japonica cultivar-group) C... 46 0.030
dbj|AP006554.2| Oryza sativa (japonica cultivar-group) geno... 46 0.030
>gb|CF290947.1|CF290947 14ROOT--01-D01.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-D01, mRNA sequence
Length = 672
Score = 553 bits (279), Expect = e-155
Identities = 409/452 (90%), Gaps = 9/452 (1%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||| |||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 543 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 484
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 424
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 423 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 364
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 363 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 304
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttcttgc---ccttcttg 581
||||||||||||||||||||||| ||||||||||| || |||||| | | |||||||
Sbjct: 303 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccccgccttcttc 244
Query: 582 ccctcgccggcgc------cggacttgcccgcggggaggcgtttctccgccttcggcttc 635
||||||||| || ||| |||||| |||||||| || ||||||||||| ||| ||
Sbjct: 243 ccctcgccgctgcccttctcggccttgccggcggggagacgcttctccgccttgggcctc 184
Query: 636 ttccctgccggagccttctccgccttctcggtcgcgggctcctcctccgcgggcttcttc 695
||||| || || |||||||| |||||||| | |||||||||||||||||||||||||||
Sbjct: 183 ttccccgcgggggccttctcggccttctccgctgcgggctcctcctccgcgggcttcttc 124
Query: 696 gccgccggctttttctccgccttgggcgccat 727
|| |||||||| ||||||||||||||||||||
Sbjct: 123 gcggccggcttcttctccgccttgggcgccat 92
>gb|CB670862.1|CB670862 OSJNEe04C16.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04C16 5', mRNA sequence
Length = 700
Score = 537 bits (271), Expect = e-150
Identities = 407/452 (90%), Gaps = 9/452 (1%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||| || ||||| ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 512 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 453
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 452 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 393
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||| ||| |||||||||||||||||||||| ||||||||||| |||
Sbjct: 392 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 333
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 332 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 273
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttcttgc---ccttcttg 581
||||||||||||||||||||||| ||||||||||| || |||||| | | |||||||
Sbjct: 272 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccccgccttcttc 213
Query: 582 ccctcgccggcgc------cggacttgcccgcggggaggcgtttctccgccttcggcttc 635
||||||||| || ||| |||||| |||||||| || ||||||||||| ||||||
Sbjct: 212 ccctcgccgctgcccttctcggccttgccggcggggagacgcttctccgccttgggcttc 153
Query: 636 ttccctgccggagccttctccgccttctcggtcgcgggctcctcctccgcgggcttcttc 695
||||| || || |||||||| |||||||| | |||||||||||||||||||||||||||
Sbjct: 152 ttccccgcgggggccttctcggccttctccgctgcgggctcctcctccgcgggcttcttc 93
Query: 696 gccgccggctttttctccgccttgggcgccat 727
|| |||||||| ||||||||||||||||||||
Sbjct: 92 gcggccggcttcttctccgccttgggcgccat 61
>dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0434B04
Length = 167029
Score = 537 bits (271), Expect = e-150
Identities = 407/452 (90%), Gaps = 9/452 (1%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||| || ||||| ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 136028 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 135969
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 135968 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 135909
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||| ||| |||||||||||||||||||||| ||||||||||| |||
Sbjct: 135908 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 135849
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 135848 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 135789
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttcttgc---ccttcttg 581
||||||||||||||||||||||| ||||||||||| || |||||| | | |||||||
Sbjct: 135788 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccccgccttcttc 135729
Query: 582 ccctcgccggcgc------cggacttgcccgcggggaggcgtttctccgccttcggcttc 635
||||||||| || ||| |||||| |||||||| || ||||||||||| ||||||
Sbjct: 135728 ccctcgccgctgcccttctcggccttgccggcggggagacgcttctccgccttgggcttc 135669
Query: 636 ttccctgccggagccttctccgccttctcggtcgcgggctcctcctccgcgggcttcttc 695
||||| || || |||||||| |||||||| | |||||||||||||||||||||||||||
Sbjct: 135668 ttccccgcgggggccttctcggccttctccgctgcgggctcctcctccgcgggcttcttc 135609
Query: 696 gccgccggctttttctccgccttgggcgccat 727
|| |||||||| ||||||||||||||||||||
Sbjct: 135608 gcggccggcttcttctccgccttgggcgccat 135577
Score = 446 bits (225), Expect = e-123
Identities = 270/285 (94%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||| |||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 123705 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 123646
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123645 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 123586
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 123585 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 123526
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 123525 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 123466
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 123465 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 123421
Score = 157 bits (79), Expect = 1e-035
Identities = 121/135 (89%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| || || |||||||| ||
Sbjct: 123382 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 123323
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 123322 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgcctt 123263
Query: 719 gggcgccatcgatgc 733
||||||||| |||||
Sbjct: 123262 gggcgccatggatgc 123248
>gb|AACV01000195.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000195, whole
genome shotgun sequence
Length = 6165
Score = 537 bits (271), Expect = e-150
Identities = 407/452 (90%), Gaps = 9/452 (1%)
Strand = Plus / Plus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||| || ||||| ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 5304 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 5363
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 5364 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 5423
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||| ||| |||||||||||||||||||||| ||||||||||| |||
Sbjct: 5424 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 5483
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 5484 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 5543
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttcttgc---ccttcttg 581
||||||||||||||||||||||| ||||||||||| || |||||| | | |||||||
Sbjct: 5544 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccccgccttcttc 5603
Query: 582 ccctcgccggcgc------cggacttgcccgcggggaggcgtttctccgccttcggcttc 635
||||||||| || ||| |||||| |||||||| || ||||||||||| ||||||
Sbjct: 5604 ccctcgccgctgcccttctcggccttgccggcggggagacgcttctccgccttgggcttc 5663
Query: 636 ttccctgccggagccttctccgccttctcggtcgcgggctcctcctccgcgggcttcttc 695
||||| || || |||||||| |||||||| | |||||||||||||||||||||||||||
Sbjct: 5664 ttccccgcgggggccttctcggccttctccgctgcgggctcctcctccgcgggcttcttc 5723
Query: 696 gccgccggctttttctccgccttgggcgccat 727
|| |||||||| ||||||||||||||||||||
Sbjct: 5724 gcggccggcttcttctccgccttgggcgccat 5755
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 537 bits (271), Expect = e-150
Identities = 407/452 (90%), Gaps = 9/452 (1%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||| || ||||| ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 2684055 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 2683996
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2683995 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 2683936
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||| ||| |||||||||||||||||||||| ||||||||||| |||
Sbjct: 2683935 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 2683876
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 2683875 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 2683816
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttcttgc---ccttcttg 581
||||||||||||||||||||||| ||||||||||| || |||||| | | |||||||
Sbjct: 2683815 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccccgccttcttc 2683756
Query: 582 ccctcgccggcgc------cggacttgcccgcggggaggcgtttctccgccttcggcttc 635
||||||||| || ||| |||||| |||||||| || ||||||||||| ||||||
Sbjct: 2683755 ccctcgccgctgcccttctcggccttgccggcggggagacgcttctccgccttgggcttc 2683696
Query: 636 ttccctgccggagccttctccgccttctcggtcgcgggctcctcctccgcgggcttcttc 695
||||| || || |||||||| |||||||| | |||||||||||||||||||||||||||
Sbjct: 2683695 ttccccgcgggggccttctcggccttctccgctgcgggctcctcctccgcgggcttcttc 2683636
Query: 696 gccgccggctttttctccgccttgggcgccat 727
|| |||||||| ||||||||||||||||||||
Sbjct: 2683635 gcggccggcttcttctccgccttgggcgccat 2683604
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||||||||| || ||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 2869447 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 2869388
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2869387 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2869328
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 2869327 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 2869268
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 2869267 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2869208
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 2869207 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2869163
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Plus
Query: 275 ctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgag 334
|||||| ||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||
Sbjct: 2854400 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 2854459
Query: 335 ctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 394
||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 2854460 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 2854519
Query: 395 cttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgat 454
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2854520 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 2854579
Query: 455 gaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgctt 514
|||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 2854580 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 2854639
Query: 515 gagcaccttgaagatgtagatcttgtaggtctccacgctcttctt 559
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2854640 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttctt 2854684
Score = 446 bits (225), Expect = e-123
Identities = 270/285 (94%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||| |||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 2671732 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2671673
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2671672 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2671613
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 2671612 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 2671553
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 2671552 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 2671493
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 2671492 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2671448
Score = 440 bits (222), Expect = e-121
Identities = 264/278 (94%)
Strand = Plus / Plus
Query: 282 gaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccg 341
||||| ||||||||||| ||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 2841468 gaagtaaacttggtgacggccttcgtgccctcggagacggcgtgcttggcgagctcgccg 2841527
Query: 342 ggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttg 401
|| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 2841528 gggaggacgaggcggacggaggtctgaatctcccgggaggtgatggtgggcttcttgttg 2841587
Query: 402 tagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaa 461
||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 2841588 tagcgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggag 2841647
Query: 462 ttcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcacc 521
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 2841648 ttcatgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcacc 2841707
Query: 522 ttgaagatgtagatcttgtaggtctccacgctcttctt 559
|||||||||||||||||||||||||| |||||||||||
Sbjct: 2841708 ttgaagatgtagatcttgtaggtctcgacgctcttctt 2841745
Score = 432 bits (218), Expect = e-118
Identities = 278/298 (93%)
Strand = Plus / Plus
Query: 272 aatctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggc 331
|||||||| || ||||||||||| || ||||| ||||| || |||||||||||||||||
Sbjct: 2817034 aatctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 2817093
Query: 332 gagctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtggg 391
|||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 2817094 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 2817153
Query: 392 cttcttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgtt 451
||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 2817154 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgtt 2817213
Query: 452 gatgaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctg 511
||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 2817214 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 2817273
Query: 512 cttgagcaccttgaagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
|||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 2817274 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2817331
Score = 412 bits (208), Expect = e-112
Identities = 268/288 (93%)
Strand = Plus / Plus
Query: 282 gaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccg 341
|||||||||||||| || ||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 2834855 gaagtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccg 2834914
Query: 342 ggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttg 401
|| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 2834915 gggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttg 2834974
Query: 402 tagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaa 461
||||| ||||||||||||| ||| ||||||||||||||||||| || |||||||||||
Sbjct: 2834975 tagcgcgcgagcttggcggactctccggcgagcttctcgaagatatcattgatgaaggag 2835034
Query: 462 ttcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcacc 521
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 2835035 ttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcacc 2835094
Query: 522 ttgaagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
|||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 2835095 ttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2835142
Score = 375 bits (189), Expect = e-101
Identities = 276/305 (90%)
Strand = Plus / Plus
Query: 276 taagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagc 335
|||||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 36088103 taagacgacgtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcgagc 36088162
Query: 336 tcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttc 395
|||||||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||
Sbjct: 36088163 tcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtcggcttc 36088222
Query: 396 ttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatg 455
||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||
Sbjct: 36088223 ttgttgtagcgggcgagacgggcggcctcctgggcgagcttctcgaagatatcgttgatg 36088282
Query: 456 aaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttg 515
|| || |||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||
Sbjct: 36088283 aacgagttcatgatcgacatggccttggacgatatcccgatatcgggatgcacctgcttg 36088342
Query: 516 agcaccttgaagatgtagatcttgtaggtctccacgctcttcttggctttcttcttgccc 575
|| |||||||| ||||||||||| || || || |||||||||||||| |||||||| |||
Sbjct: 36088343 aggaccttgaaaatgtagatcttataagtttcgacgctcttcttggccttcttcttcccc 36088402
Query: 576 ttctt 580
|||||
Sbjct: 36088403 ttctt 36088407
Score = 343 bits (173), Expect = 9e-092
Identities = 233/253 (92%)
Strand = Plus / Plus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
|||||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 17500452 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 17500511
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
|||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||
Sbjct: 17500512 aggacgaggcggacggaggtctagatctcgcgggaggtggcgatgggcttcttgttgtag 17500571
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||| | |||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 17500572 cgggcgaggtgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttc 17500631
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
||||| |||||||||||||| |||||||||||||| |||||||||||||| || ||||||
Sbjct: 17500632 atgatcgacatggccttggaggagatgccgatgtccgggtgcacctgcttcaggaccttg 17500691
Query: 525 aagatgtagatct 537
|||||||||||||
Sbjct: 17500692 aagatgtagatct 17500704
Score = 188 bits (95), Expect = 3e-045
Identities = 125/135 (92%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| ||||||||||| ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 2835181 cttgccggcggggaggcgcttctccgccttgggcttcttccccgccggggccttctcggc 2835240
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2835241 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 2835300
Query: 719 gggcgccatcgatgc 733
||||||||| |||||
Sbjct: 2835301 gggcgccatggatgc 2835315
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 2869118 cttgccggcggggagccgcttctccgccttgggcttcttcccggccggggccttctcggc 2869059
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 2869058 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2868999
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 2868998 gggcgccatggatgctgc 2868981
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 2854733 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 2854792
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 2854793 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2854852
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 2854853 gggcgccatggatgctgc 2854870
Score = 172 bits (87), Expect = 2e-040
Identities = 123/135 (91%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||| | |||||||| ||
Sbjct: 2817370 cttgccggcggggagacgcttctccgccttgggcttcttccccgccagggccttctcggc 2817429
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2817430 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 2817489
Query: 719 gggcgccatcgatgc 733
||||||||| |||||
Sbjct: 2817490 gggcgccatggatgc 2817504
Score = 167 bits (84), Expect = 1e-038
Identities = 123/136 (90%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| || || |||||||| ||
Sbjct: 2841794 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2841853
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 2841854 cttctctgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2841913
Query: 719 gggcgccatcgatgct 734
||||||||| ||||||
Sbjct: 2841914 gggcgccatggatgct 2841929
Score = 157 bits (79), Expect = 1e-035
Identities = 121/135 (89%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| || || |||||||| ||
Sbjct: 2671409 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2671350
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 2671349 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgcctt 2671290
Query: 719 gggcgccatcgatgc 733
||||||||| |||||
Sbjct: 2671289 gggcgccatggatgc 2671275
Score = 65.9 bits (33), Expect = 3e-008
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 677 ctcctccgcgggcttcttcgccgccggctttttctccgccttgggcgccatcg 729
||||||| | ||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 36088471 ctcctccaccggcttcttctccgcgggcttcttctccgccttgggcgccatcg 36088523
Score = 65.9 bits (33), Expect = 3e-008
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 432 agcttctcgaagatgtcgttgatgaaggaattcatgatggacatggcct 480
||||||||||| | ||||||||||||||| |||||||| ||||||||||
Sbjct: 31022797 agcttctcgaaaacgtcgttgatgaaggatttcatgatagacatggcct 31022845
Score = 56.0 bits (28), Expect = 3e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 686 gggcttcttcgccgccggctttttctccgccttgggcgccatcg 729
|||||||||| || ||||||| ||||| ||||||||||||||||
Sbjct: 17500799 gggcttcttctccaccggcttcttctctgccttgggcgccatcg 17500842
Score = 46.1 bits (23), Expect = 0.030
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 518 caccttgaagatgtagatcttgtaggt 544
|||||||||||||||||||| ||||||
Sbjct: 20130056 caccttgaagatgtagatctcgtaggt 20130030
Score = 46.1 bits (23), Expect = 0.030
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 516 agcaccttgaagatgtagatcttgtag 542
|||||||||||||| ||||||||||||
Sbjct: 12267585 agcaccttgaagatatagatcttgtag 12267559
Score = 42.1 bits (21), Expect = 0.46
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 517 gcaccttgaagatgtagatcttgta 541
||||||||||||||| |||||||||
Sbjct: 30557182 gcaccttgaagatgttgatcttgta 30557158
>ref|NM_184374.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 462
Score = 537 bits (271), Expect = e-150
Identities = 407/452 (90%), Gaps = 9/452 (1%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||| || ||||| ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 452 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 393
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 392 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 333
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||| ||| |||||||||||||||||||||| ||||||||||| |||
Sbjct: 332 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 273
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 272 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 213
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttcttgc---ccttcttg 581
||||||||||||||||||||||| ||||||||||| || |||||| | | |||||||
Sbjct: 212 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccccgccttcttc 153
Query: 582 ccctcgccggcgc------cggacttgcccgcggggaggcgtttctccgccttcggcttc 635
||||||||| || ||| |||||| |||||||| || ||||||||||| ||||||
Sbjct: 152 ccctcgccgctgcccttctcggccttgccggcggggagacgcttctccgccttgggcttc 93
Query: 636 ttccctgccggagccttctccgccttctcggtcgcgggctcctcctccgcgggcttcttc 695
||||| || || |||||||| |||||||| | |||||||||||||||||||||||||||
Sbjct: 92 ttccccgcgggggccttctcggccttctccgctgcgggctcctcctccgcgggcttcttc 33
Query: 696 gccgccggctttttctccgccttgggcgccat 727
|| |||||||| ||||||||||||||||||||
Sbjct: 32 gcggccggcttcttctccgccttgggcgccat 1
>ref|NT_036312.3| Oryza sativa (japonica cultivar-group)
Length = 10050053
Score = 537 bits (271), Expect = e-150
Identities = 407/452 (90%), Gaps = 9/452 (1%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||| || ||||| ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 2684055 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 2683996
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2683995 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 2683936
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||| ||| |||||||||||||||||||||| ||||||||||| |||
Sbjct: 2683935 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 2683876
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 2683875 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 2683816
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttcttgc---ccttcttg 581
||||||||||||||||||||||| ||||||||||| || |||||| | | |||||||
Sbjct: 2683815 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccccgccttcttc 2683756
Query: 582 ccctcgccggcgc------cggacttgcccgcggggaggcgtttctccgccttcggcttc 635
||||||||| || ||| |||||| |||||||| || ||||||||||| ||||||
Sbjct: 2683755 ccctcgccgctgcccttctcggccttgccggcggggagacgcttctccgccttgggcttc 2683696
Query: 636 ttccctgccggagccttctccgccttctcggtcgcgggctcctcctccgcgggcttcttc 695
||||| || || |||||||| |||||||| | |||||||||||||||||||||||||||
Sbjct: 2683695 ttccccgcgggggccttctcggccttctccgctgcgggctcctcctccgcgggcttcttc 2683636
Query: 696 gccgccggctttttctccgccttgggcgccat 727
|| |||||||| ||||||||||||||||||||
Sbjct: 2683635 gcggccggcttcttctccgccttgggcgccat 2683604
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||||||||| || ||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 2869447 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 2869388
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2869387 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2869328
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 2869327 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 2869268
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 2869267 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2869208
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 2869207 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2869163
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Plus
Query: 275 ctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgag 334
|||||| ||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||
Sbjct: 2854400 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 2854459
Query: 335 ctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 394
||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 2854460 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 2854519
Query: 395 cttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgat 454
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2854520 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 2854579
Query: 455 gaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgctt 514
|||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 2854580 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 2854639
Query: 515 gagcaccttgaagatgtagatcttgtaggtctccacgctcttctt 559
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2854640 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttctt 2854684
Score = 446 bits (225), Expect = e-123
Identities = 270/285 (94%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||| |||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 2671732 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2671673
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2671672 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2671613
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 2671612 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 2671553
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 2671552 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 2671493
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 2671492 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2671448
Score = 440 bits (222), Expect = e-121
Identities = 264/278 (94%)
Strand = Plus / Plus
Query: 282 gaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccg 341
||||| ||||||||||| ||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 2841468 gaagtaaacttggtgacggccttcgtgccctcggagacggcgtgcttggcgagctcgccg 2841527
Query: 342 ggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttg 401
|| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 2841528 gggaggacgaggcggacggaggtctgaatctcccgggaggtgatggtgggcttcttgttg 2841587
Query: 402 tagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaa 461
||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 2841588 tagcgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggag 2841647
Query: 462 ttcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcacc 521
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 2841648 ttcatgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcacc 2841707
Query: 522 ttgaagatgtagatcttgtaggtctccacgctcttctt 559
|||||||||||||||||||||||||| |||||||||||
Sbjct: 2841708 ttgaagatgtagatcttgtaggtctcgacgctcttctt 2841745
Score = 432 bits (218), Expect = e-118
Identities = 278/298 (93%)
Strand = Plus / Plus
Query: 272 aatctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggc 331
|||||||| || ||||||||||| || ||||| ||||| || |||||||||||||||||
Sbjct: 2817034 aatctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 2817093
Query: 332 gagctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtggg 391
|||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 2817094 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 2817153
Query: 392 cttcttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgtt 451
||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 2817154 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgtt 2817213
Query: 452 gatgaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctg 511
||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 2817214 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 2817273
Query: 512 cttgagcaccttgaagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
|||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 2817274 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2817331
Score = 412 bits (208), Expect = e-112
Identities = 268/288 (93%)
Strand = Plus / Plus
Query: 282 gaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccg 341
|||||||||||||| || ||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 2834855 gaagtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccg 2834914
Query: 342 ggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttg 401
|| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 2834915 gggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttg 2834974
Query: 402 tagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaa 461
||||| ||||||||||||| ||| ||||||||||||||||||| || |||||||||||
Sbjct: 2834975 tagcgcgcgagcttggcggactctccggcgagcttctcgaagatatcattgatgaaggag 2835034
Query: 462 ttcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcacc 521
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 2835035 ttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcacc 2835094
Query: 522 ttgaagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
|||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 2835095 ttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2835142
Score = 188 bits (95), Expect = 3e-045
Identities = 125/135 (92%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| ||||||||||| ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 2835181 cttgccggcggggaggcgcttctccgccttgggcttcttccccgccggggccttctcggc 2835240
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2835241 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 2835300
Query: 719 gggcgccatcgatgc 733
||||||||| |||||
Sbjct: 2835301 gggcgccatggatgc 2835315
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 2869118 cttgccggcggggagccgcttctccgccttgggcttcttcccggccggggccttctcggc 2869059
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 2869058 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2868999
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 2868998 gggcgccatggatgctgc 2868981
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 2854733 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 2854792
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 2854793 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2854852
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 2854853 gggcgccatggatgctgc 2854870
Score = 172 bits (87), Expect = 2e-040
Identities = 123/135 (91%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||| | |||||||| ||
Sbjct: 2817370 cttgccggcggggagacgcttctccgccttgggcttcttccccgccagggccttctcggc 2817429
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2817430 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 2817489
Query: 719 gggcgccatcgatgc 733
||||||||| |||||
Sbjct: 2817490 gggcgccatggatgc 2817504
Score = 167 bits (84), Expect = 1e-038
Identities = 123/136 (90%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| || || |||||||| ||
Sbjct: 2841794 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2841853
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 2841854 cttctctgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2841913
Query: 719 gggcgccatcgatgct 734
||||||||| ||||||
Sbjct: 2841914 gggcgccatggatgct 2841929
Score = 157 bits (79), Expect = 1e-035
Identities = 121/135 (89%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| || || |||||||| ||
Sbjct: 2671409 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2671350
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 2671349 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgcctt 2671290
Query: 719 gggcgccatcgatgc 733
||||||||| |||||
Sbjct: 2671289 gggcgccatggatgc 2671275
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 537 bits (271), Expect = e-150
Identities = 407/452 (90%), Gaps = 9/452 (1%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||| || ||||| ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 2743495 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 2743436
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2743435 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 2743376
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||| ||| |||||||||||||||||||||| ||||||||||| |||
Sbjct: 2743375 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 2743316
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 2743315 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 2743256
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttcttgc---ccttcttg 581
||||||||||||||||||||||| ||||||||||| || |||||| | | |||||||
Sbjct: 2743255 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccccgccttcttc 2743196
Query: 582 ccctcgccggcgc------cggacttgcccgcggggaggcgtttctccgccttcggcttc 635
||||||||| || ||| |||||| |||||||| || ||||||||||| ||||||
Sbjct: 2743195 ccctcgccgctgcccttctcggccttgccggcggggagacgcttctccgccttgggcttc 2743136
Query: 636 ttccctgccggagccttctccgccttctcggtcgcgggctcctcctccgcgggcttcttc 695
||||| || || |||||||| |||||||| | |||||||||||||||||||||||||||
Sbjct: 2743135 ttccccgcgggggccttctcggccttctccgctgcgggctcctcctccgcgggcttcttc 2743076
Query: 696 gccgccggctttttctccgccttgggcgccat 727
|| |||||||| ||||||||||||||||||||
Sbjct: 2743075 gcggccggcttcttctccgccttgggcgccat 2743044
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||||||||| || ||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 2929384 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 2929325
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2929324 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2929265
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 2929264 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 2929205
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 2929204 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2929145
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 2929144 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2929100
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Plus
Query: 275 ctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgag 334
|||||| ||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||
Sbjct: 2914337 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 2914396
Query: 335 ctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 394
||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 2914397 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 2914456
Query: 395 cttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgat 454
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2914457 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 2914516
Query: 455 gaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgctt 514
|||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 2914517 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 2914576
Query: 515 gagcaccttgaagatgtagatcttgtaggtctccacgctcttctt 559
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2914577 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttctt 2914621
Score = 446 bits (225), Expect = e-123
Identities = 270/285 (94%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||| |||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 2730986 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2730927
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2730926 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2730867
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 2730866 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 2730807
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 2730806 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 2730747
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 2730746 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2730702
Score = 432 bits (218), Expect = e-118
Identities = 278/298 (93%)
Strand = Plus / Plus
Query: 272 aatctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggc 331
|||||||| || ||||||||||| || ||||| ||||| || |||||||||||||||||
Sbjct: 2874187 aatctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 2874246
Query: 332 gagctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtggg 391
|||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 2874247 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 2874306
Query: 392 cttcttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgtt 451
||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 2874307 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgtt 2874366
Query: 452 gatgaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctg 511
||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 2874367 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 2874426
Query: 512 cttgagcaccttgaagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
|||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 2874427 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2874484
Score = 412 bits (208), Expect = e-112
Identities = 268/288 (93%)
Strand = Plus / Plus
Query: 282 gaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccg 341
|||||||||||||| || ||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 2894845 gaagtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccg 2894904
Query: 342 ggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttg 401
|| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 2894905 gggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttg 2894964
Query: 402 tagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaa 461
||||| ||||||||||||| ||| ||||||||||||||||||| || |||||||||||
Sbjct: 2894965 tagcgcgcgagcttggcggactctccggcgagcttctcgaagatatcattgatgaaggag 2895024
Query: 462 ttcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcacc 521
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 2895025 ttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcacc 2895084
Query: 522 ttgaagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
|||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 2895085 ttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2895132
Score = 188 bits (95), Expect = 3e-045
Identities = 125/135 (92%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| ||||||||||| ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 2895171 cttgccggcggggaggcgcttctccgccttgggcttcttccccgccggggccttctcggc 2895230
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2895231 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 2895290
Query: 719 gggcgccatcgatgc 733
||||||||| |||||
Sbjct: 2895291 gggcgccatggatgc 2895305
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 2929055 cttgccggcggggagccgcttctccgccttgggcttcttcccggccggggccttctcggc 2928996
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 2928995 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2928936
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 2928935 gggcgccatggatgctgc 2928918
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 2914670 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 2914729
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 2914730 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2914789
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 2914790 gggcgccatggatgctgc 2914807
Score = 172 bits (87), Expect = 2e-040
Identities = 123/135 (91%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||| | |||||||| ||
Sbjct: 2874523 cttgccggcggggagacgcttctccgccttgggcttcttccccgccagggccttctcggc 2874582
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2874583 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 2874642
Query: 719 gggcgccatcgatgc 733
||||||||| |||||
Sbjct: 2874643 gggcgccatggatgc 2874657
Score = 167 bits (84), Expect = 1e-038
Identities = 123/136 (90%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| || || |||||||| ||
Sbjct: 2901728 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2901787
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 2901788 cttctctgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2901847
Query: 719 gggcgccatcgatgct 734
||||||||| ||||||
Sbjct: 2901848 gggcgccatggatgct 2901863
Score = 157 bits (79), Expect = 1e-035
Identities = 121/135 (89%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| || || |||||||| ||
Sbjct: 2730663 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2730604
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 2730603 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgcctt 2730544
Query: 719 gggcgccatcgatgc 733
||||||||| |||||
Sbjct: 2730543 gggcgccatggatgc 2730529
Score = 91.7 bits (46), Expect = 6e-016
Identities = 59/62 (95%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 495 atgtcggggtgcacctgcttgagcaccttgaagatgtagatcttgtaggtctccacgctc 554
||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2901616 atgtcggggtgaac-tgcttgagcaccttgaagatgtagatcttgtaggtctcgacgctc 2901674
Query: 555 tt 556
||
Sbjct: 2901675 tt 2901676
Score = 73.8 bits (37), Expect = 1e-010
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 282 gaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcg 338
||||| ||||||||||| ||||| ||||| || ||||||||||||||||||||||||
Sbjct: 2901459 gaagtaaacttggtgacggccttcgtgccctcggagacggcgtgcttggcgagctcg 2901515
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 537 bits (271), Expect = e-150
Identities = 407/452 (90%), Gaps = 9/452 (1%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||| || ||||| ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 2743495 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 2743436
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2743435 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 2743376
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||| ||| |||||||||||||||||||||| ||||||||||| |||
Sbjct: 2743375 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 2743316
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 2743315 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 2743256
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttcttgc---ccttcttg 581
||||||||||||||||||||||| ||||||||||| || |||||| | | |||||||
Sbjct: 2743255 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccccgccttcttc 2743196
Query: 582 ccctcgccggcgc------cggacttgcccgcggggaggcgtttctccgccttcggcttc 635
||||||||| || ||| |||||| |||||||| || ||||||||||| ||||||
Sbjct: 2743195 ccctcgccgctgcccttctcggccttgccggcggggagacgcttctccgccttgggcttc 2743136
Query: 636 ttccctgccggagccttctccgccttctcggtcgcgggctcctcctccgcgggcttcttc 695
||||| || || |||||||| |||||||| | |||||||||||||||||||||||||||
Sbjct: 2743135 ttccccgcgggggccttctcggccttctccgctgcgggctcctcctccgcgggcttcttc 2743076
Query: 696 gccgccggctttttctccgccttgggcgccat 727
|| |||||||| ||||||||||||||||||||
Sbjct: 2743075 gcggccggcttcttctccgccttgggcgccat 2743044
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||||||||| || ||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 2929384 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 2929325
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2929324 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2929265
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 2929264 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 2929205
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 2929204 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2929145
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 2929144 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2929100
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Plus
Query: 275 ctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgag 334
|||||| ||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||
Sbjct: 2914337 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 2914396
Query: 335 ctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 394
||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 2914397 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 2914456
Query: 395 cttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgat 454
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2914457 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 2914516
Query: 455 gaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgctt 514
|||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 2914517 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 2914576
Query: 515 gagcaccttgaagatgtagatcttgtaggtctccacgctcttctt 559
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2914577 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttctt 2914621
Score = 446 bits (225), Expect = e-123
Identities = 270/285 (94%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||| |||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 2730986 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2730927
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2730926 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2730867
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 2730866 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 2730807
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 2730806 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 2730747
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 2730746 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2730702
Score = 432 bits (218), Expect = e-118
Identities = 278/298 (93%)
Strand = Plus / Plus
Query: 272 aatctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggc 331
|||||||| || ||||||||||| || ||||| ||||| || |||||||||||||||||
Sbjct: 2874187 aatctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 2874246
Query: 332 gagctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtggg 391
|||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 2874247 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 2874306
Query: 392 cttcttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgtt 451
||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 2874307 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgtt 2874366
Query: 452 gatgaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctg 511
||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 2874367 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 2874426
Query: 512 cttgagcaccttgaagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
|||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 2874427 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2874484
Score = 412 bits (208), Expect = e-112
Identities = 268/288 (93%)
Strand = Plus / Plus
Query: 282 gaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccg 341
|||||||||||||| || ||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 2894845 gaagtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccg 2894904
Query: 342 ggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttg 401
|| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 2894905 gggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttg 2894964
Query: 402 tagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaa 461
||||| ||||||||||||| ||| ||||||||||||||||||| || |||||||||||
Sbjct: 2894965 tagcgcgcgagcttggcggactctccggcgagcttctcgaagatatcattgatgaaggag 2895024
Query: 462 ttcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcacc 521
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 2895025 ttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcacc 2895084
Query: 522 ttgaagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
|||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 2895085 ttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2895132
Score = 375 bits (189), Expect = e-101
Identities = 276/305 (90%)
Strand = Plus / Plus
Query: 276 taagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagc 335
|||||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 35483371 taagacgacgtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcgagc 35483430
Query: 336 tcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttc 395
|||||||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||
Sbjct: 35483431 tcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtcggcttc 35483490
Query: 396 ttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatg 455
||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||
Sbjct: 35483491 ttgttgtagcgggcgagacgggcggcctcctgggcgagcttctcgaagatatcgttgatg 35483550
Query: 456 aaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttg 515
|| || |||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||
Sbjct: 35483551 aacgagttcatgatcgacatggccttggacgatatcccgatatcgggatgcacctgcttg 35483610
Query: 516 agcaccttgaagatgtagatcttgtaggtctccacgctcttcttggctttcttcttgccc 575
|| |||||||| ||||||||||| || || || |||||||||||||| |||||||| |||
Sbjct: 35483611 aggaccttgaaaatgtagatcttataagtttcgacgctcttcttggccttcttcttcccc 35483670
Query: 576 ttctt 580
|||||
Sbjct: 35483671 ttctt 35483675
Score = 343 bits (173), Expect = 9e-092
Identities = 233/253 (92%)
Strand = Plus / Plus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
|||||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 17079155 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 17079214
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
|||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||
Sbjct: 17079215 aggacgaggcggacggaggtctagatctcgcgggaggtggcgatgggcttcttgttgtag 17079274
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||| | |||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 17079275 cgggcgaggtgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttc 17079334
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
||||| |||||||||||||| |||||||||||||| |||||||||||||| || ||||||
Sbjct: 17079335 atgatcgacatggccttggaggagatgccgatgtccgggtgcacctgcttcaggaccttg 17079394
Query: 525 aagatgtagatct 537
|||||||||||||
Sbjct: 17079395 aagatgtagatct 17079407
Score = 188 bits (95), Expect = 3e-045
Identities = 125/135 (92%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| ||||||||||| ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 2895171 cttgccggcggggaggcgcttctccgccttgggcttcttccccgccggggccttctcggc 2895230
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2895231 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 2895290
Query: 719 gggcgccatcgatgc 733
||||||||| |||||
Sbjct: 2895291 gggcgccatggatgc 2895305
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 2929055 cttgccggcggggagccgcttctccgccttgggcttcttcccggccggggccttctcggc 2928996
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 2928995 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2928936
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 2928935 gggcgccatggatgctgc 2928918
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 2914670 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 2914729
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 2914730 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2914789
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 2914790 gggcgccatggatgctgc 2914807
Score = 172 bits (87), Expect = 2e-040
Identities = 123/135 (91%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||| | |||||||| ||
Sbjct: 2874523 cttgccggcggggagacgcttctccgccttgggcttcttccccgccagggccttctcggc 2874582
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2874583 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 2874642
Query: 719 gggcgccatcgatgc 733
||||||||| |||||
Sbjct: 2874643 gggcgccatggatgc 2874657
Score = 167 bits (84), Expect = 1e-038
Identities = 123/136 (90%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| || || |||||||| ||
Sbjct: 2901728 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2901787
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 2901788 cttctctgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2901847
Query: 719 gggcgccatcgatgct 734
||||||||| ||||||
Sbjct: 2901848 gggcgccatggatgct 2901863
Score = 157 bits (79), Expect = 1e-035
Identities = 121/135 (89%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| || || |||||||| ||
Sbjct: 2730663 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2730604
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 2730603 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgcctt 2730544
Query: 719 gggcgccatcgatgc 733
||||||||| |||||
Sbjct: 2730543 gggcgccatggatgc 2730529
Score = 91.7 bits (46), Expect = 6e-016
Identities = 59/62 (95%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 495 atgtcggggtgcacctgcttgagcaccttgaagatgtagatcttgtaggtctccacgctc 554
||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2901616 atgtcggggtgaac-tgcttgagcaccttgaagatgtagatcttgtaggtctcgacgctc 2901674
Query: 555 tt 556
||
Sbjct: 2901675 tt 2901676
Score = 73.8 bits (37), Expect = 1e-010
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 282 gaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcg 338
||||| ||||||||||| ||||| ||||| || ||||||||||||||||||||||||
Sbjct: 2901459 gaagtaaacttggtgacggccttcgtgccctcggagacggcgtgcttggcgagctcg 2901515
Score = 65.9 bits (33), Expect = 3e-008
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 677 ctcctccgcgggcttcttcgccgccggctttttctccgccttgggcgccatcg 729
||||||| | ||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 35483739 ctcctccaccggcttcttctccgcgggcttcttctccgccttgggcgccatcg 35483791
Score = 65.9 bits (33), Expect = 3e-008
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 432 agcttctcgaagatgtcgttgatgaaggaattcatgatggacatggcct 480
||||||||||| | ||||||||||||||| |||||||| ||||||||||
Sbjct: 30573944 agcttctcgaaaacgtcgttgatgaaggatttcatgatagacatggcct 30573992
Score = 56.0 bits (28), Expect = 3e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 686 gggcttcttcgccgccggctttttctccgccttgggcgccatcg 729
|||||||||| || ||||||| ||||| ||||||||||||||||
Sbjct: 17079502 gggcttcttctccaccggcttcttctctgccttgggcgccatcg 17079545
Score = 46.1 bits (23), Expect = 0.030
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 518 caccttgaagatgtagatcttgtaggt 544
|||||||||||||||||||| ||||||
Sbjct: 19722175 caccttgaagatgtagatctcgtaggt 19722149
Score = 46.1 bits (23), Expect = 0.030
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 516 agcaccttgaagatgtagatcttgtag 542
|||||||||||||| ||||||||||||
Sbjct: 12266809 agcaccttgaagatatagatcttgtag 12266783
Score = 42.1 bits (21), Expect = 0.46
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 517 gcaccttgaagatgtagatcttgta 541
||||||||||||||| |||||||||
Sbjct: 30140110 gcaccttgaagatgttgatcttgta 30140086
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 537 bits (271), Expect = e-150
Identities = 407/452 (90%), Gaps = 9/452 (1%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||| || ||||| ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 2686253 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 2686194
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2686193 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 2686134
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||| ||| |||||||||||||||||||||| ||||||||||| |||
Sbjct: 2686133 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 2686074
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 2686073 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 2686014
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttcttgc---ccttcttg 581
||||||||||||||||||||||| ||||||||||| || |||||| | | |||||||
Sbjct: 2686013 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccccgccttcttc 2685954
Query: 582 ccctcgccggcgc------cggacttgcccgcggggaggcgtttctccgccttcggcttc 635
||||||||| || ||| |||||| |||||||| || ||||||||||| ||||||
Sbjct: 2685953 ccctcgccgctgcccttctcggccttgccggcggggagacgcttctccgccttgggcttc 2685894
Query: 636 ttccctgccggagccttctccgccttctcggtcgcgggctcctcctccgcgggcttcttc 695
||||| || || |||||||| |||||||| | |||||||||||||||||||||||||||
Sbjct: 2685893 ttccccgcgggggccttctcggccttctccgctgcgggctcctcctccgcgggcttcttc 2685834
Query: 696 gccgccggctttttctccgccttgggcgccat 727
|| |||||||| ||||||||||||||||||||
Sbjct: 2685833 gcggccggcttcttctccgccttgggcgccat 2685802
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||||||||| || ||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 2871645 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 2871586
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2871585 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2871526
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 2871525 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 2871466
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 2871465 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2871406
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 2871405 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2871361
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Plus
Query: 275 ctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgag 334
|||||| ||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||
Sbjct: 2856598 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 2856657
Query: 335 ctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 394
||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 2856658 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 2856717
Query: 395 cttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgat 454
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2856718 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 2856777
Query: 455 gaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgctt 514
|||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 2856778 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 2856837
Query: 515 gagcaccttgaagatgtagatcttgtaggtctccacgctcttctt 559
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2856838 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttctt 2856882
Score = 446 bits (225), Expect = e-123
Identities = 270/285 (94%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||| |||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 2673930 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2673871
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2673870 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2673811
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 2673810 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 2673751
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 2673750 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 2673691
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 2673690 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2673646
Score = 440 bits (222), Expect = e-121
Identities = 264/278 (94%)
Strand = Plus / Plus
Query: 282 gaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccg 341
||||| ||||||||||| ||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 2843666 gaagtaaacttggtgacggccttcgtgccctcggagacggcgtgcttggcgagctcgccg 2843725
Query: 342 ggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttg 401
|| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 2843726 gggaggacgaggcggacggaggtctgaatctcccgggaggtgatggtgggcttcttgttg 2843785
Query: 402 tagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaa 461
||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 2843786 tagcgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggag 2843845
Query: 462 ttcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcacc 521
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 2843846 ttcatgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcacc 2843905
Query: 522 ttgaagatgtagatcttgtaggtctccacgctcttctt 559
|||||||||||||||||||||||||| |||||||||||
Sbjct: 2843906 ttgaagatgtagatcttgtaggtctcgacgctcttctt 2843943
Score = 432 bits (218), Expect = e-118
Identities = 278/298 (93%)
Strand = Plus / Plus
Query: 272 aatctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggc 331
|||||||| || ||||||||||| || ||||| ||||| || |||||||||||||||||
Sbjct: 2819232 aatctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 2819291
Query: 332 gagctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtggg 391
|||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 2819292 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 2819351
Query: 392 cttcttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgtt 451
||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 2819352 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgtt 2819411
Query: 452 gatgaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctg 511
||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 2819412 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 2819471
Query: 512 cttgagcaccttgaagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
|||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 2819472 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2819529
Score = 412 bits (208), Expect = e-112
Identities = 268/288 (93%)
Strand = Plus / Plus
Query: 282 gaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccg 341
|||||||||||||| || ||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 2837053 gaagtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccg 2837112
Query: 342 ggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttg 401
|| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 2837113 gggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttg 2837172
Query: 402 tagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaa 461
||||| ||||||||||||| ||| ||||||||||||||||||| || |||||||||||
Sbjct: 2837173 tagcgcgcgagcttggcggactctccggcgagcttctcgaagatatcattgatgaaggag 2837232
Query: 462 ttcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcacc 521
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 2837233 ttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcacc 2837292
Query: 522 ttgaagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
|||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 2837293 ttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2837340
Score = 375 bits (189), Expect = e-101
Identities = 276/305 (90%)
Strand = Plus / Plus
Query: 276 taagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagc 335
|||||||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 36007433 taagacgacgtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcgagc 36007492
Query: 336 tcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttc 395
|||||||| ||||||||||| || ||||||||||||||||||||||||||||| ||||||
Sbjct: 36007493 tcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtcggcttc 36007552
Query: 396 ttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatg 455
||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||
Sbjct: 36007553 ttgttgtagcgggcgagacgggcggcctcctgggcgagcttctcgaagatatcgttgatg 36007612
Query: 456 aaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttg 515
|| || |||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||
Sbjct: 36007613 aacgagttcatgatcgacatggccttggacgatatcccgatatcgggatgcacctgcttg 36007672
Query: 516 agcaccttgaagatgtagatcttgtaggtctccacgctcttcttggctttcttcttgccc 575
|| |||||||| ||||||||||| || || || |||||||||||||| |||||||| |||
Sbjct: 36007673 aggaccttgaaaatgtagatcttataagtttcgacgctcttcttggccttcttcttcccc 36007732
Query: 576 ttctt 580
|||||
Sbjct: 36007733 ttctt 36007737
Score = 343 bits (173), Expect = 9e-092
Identities = 233/253 (92%)
Strand = Plus / Plus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
|||||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 17421735 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 17421794
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
|||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||
Sbjct: 17421795 aggacgaggcggacggaggtctagatctcgcgggaggtggcgatgggcttcttgttgtag 17421854
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||| | |||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 17421855 cgggcgaggtgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttc 17421914
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
||||| |||||||||||||| |||||||||||||| |||||||||||||| || ||||||
Sbjct: 17421915 atgatcgacatggccttggaggagatgccgatgtccgggtgcacctgcttcaggaccttg 17421974
Query: 525 aagatgtagatct 537
|||||||||||||
Sbjct: 17421975 aagatgtagatct 17421987
Score = 188 bits (95), Expect = 3e-045
Identities = 125/135 (92%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| ||||||||||| ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 2837379 cttgccggcggggaggcgcttctccgccttgggcttcttccccgccggggccttctcggc 2837438
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2837439 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 2837498
Query: 719 gggcgccatcgatgc 733
||||||||| |||||
Sbjct: 2837499 gggcgccatggatgc 2837513
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 2871316 cttgccggcggggagccgcttctccgccttgggcttcttcccggccggggccttctcggc 2871257
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 2871256 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2871197
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 2871196 gggcgccatggatgctgc 2871179
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 2856931 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 2856990
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 2856991 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2857050
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 2857051 gggcgccatggatgctgc 2857068
Score = 172 bits (87), Expect = 2e-040
Identities = 123/135 (91%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||| | |||||||| ||
Sbjct: 2819568 cttgccggcggggagacgcttctccgccttgggcttcttccccgccagggccttctcggc 2819627
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2819628 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 2819687
Query: 719 gggcgccatcgatgc 733
||||||||| |||||
Sbjct: 2819688 gggcgccatggatgc 2819702
Score = 167 bits (84), Expect = 1e-038
Identities = 123/136 (90%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| || || |||||||| ||
Sbjct: 2843992 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2844051
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 2844052 cttctctgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2844111
Query: 719 gggcgccatcgatgct 734
||||||||| ||||||
Sbjct: 2844112 gggcgccatggatgct 2844127
Score = 157 bits (79), Expect = 1e-035
Identities = 121/135 (89%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| || || |||||||| ||
Sbjct: 2673607 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2673548
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 2673547 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgcctt 2673488
Query: 719 gggcgccatcgatgc 733
||||||||| |||||
Sbjct: 2673487 gggcgccatggatgc 2673473
Score = 65.9 bits (33), Expect = 3e-008
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 677 ctcctccgcgggcttcttcgccgccggctttttctccgccttgggcgccatcg 729
||||||| | ||||||||| |||| ||||| ||||||||||||||||||||||
Sbjct: 36007801 ctcctccaccggcttcttctccgcgggcttcttctccgccttgggcgccatcg 36007853
Score = 65.9 bits (33), Expect = 3e-008
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 432 agcttctcgaagatgtcgttgatgaaggaattcatgatggacatggcct 480
||||||||||| | ||||||||||||||| |||||||| ||||||||||
Sbjct: 30942127 agcttctcgaaaacgtcgttgatgaaggatttcatgatagacatggcct 30942175
Score = 56.0 bits (28), Expect = 3e-005
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 686 gggcttcttcgccgccggctttttctccgccttgggcgccatcg 729
|||||||||| || ||||||| ||||| ||||||||||||||||
Sbjct: 17422082 gggcttcttctccaccggcttcttctctgccttgggcgccatcg 17422125
Score = 46.1 bits (23), Expect = 0.030
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 518 caccttgaagatgtagatcttgtaggt 544
|||||||||||||||||||| ||||||
Sbjct: 20051339 caccttgaagatgtagatctcgtaggt 20051313
Score = 46.1 bits (23), Expect = 0.030
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 516 agcaccttgaagatgtagatcttgtag 542
|||||||||||||| ||||||||||||
Sbjct: 12269803 agcaccttgaagatatagatcttgtag 12269777
Score = 42.1 bits (21), Expect = 0.46
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 517 gcaccttgaagatgtagatcttgta 541
||||||||||||||| |||||||||
Sbjct: 30476512 gcaccttgaagatgttgatcttgta 30476488
>gb|CB670863.1|CB670863 OSJNEe04C16.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04C16 3', mRNA sequence
Length = 729
Score = 529 bits (267), Expect = e-148
Identities = 406/452 (89%), Gaps = 9/452 (1%)
Strand = Plus / Plus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||| || ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||
Sbjct: 189 gtgaatttagtgacggccttggtgccctcaaagacggcgtgcttggcgagctcgccgggg 248
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 249 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 308
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||| ||| |||||||||||||||||||||| ||||||||||| |||
Sbjct: 309 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 368
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 369 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 428
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttcttgc---ccttcttg 581
||||||||||||||||||||||| ||||||||||| || |||||| | | |||||||
Sbjct: 429 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccccgccttcttc 488
Query: 582 ccctcgccggcgc------cggacttgcccgcggggaggcgtttctccgccttcggcttc 635
||||||||| || ||| |||||| |||||||| || ||||||||||| ||||||
Sbjct: 489 ccctcgccgctgcccttctcggccttgccggcggggagacgcttctccgccttgggcttc 548
Query: 636 ttccctgccggagccttctccgccttctcggtcgcgggctcctcctccgcgggcttcttc 695
||||| || || |||||||| |||||||| | |||||||||||||||||||||||||||
Sbjct: 549 ttccccgcgggggccttctcggccttctccgctgcgggctcctcctccgcgggcttcttc 608
Query: 696 gccgccggctttttctccgccttgggcgccat 727
|| |||||||| ||||||||||||||||||||
Sbjct: 609 gcggccggcttcttctccgccttgggcgccat 640
>gb|AU097679.1|AU097679 AU097679 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0573, mRNA sequence
Length = 690
Score = 517 bits (261), Expect = e-144
Identities = 419/470 (89%), Gaps = 9/470 (1%)
Strand = Plus / Minus
Query: 272 aatctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggc 331
|||||||| || ||||||||||| || ||||| ||||| || |||||||||||||||||
Sbjct: 517 aatctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 458
Query: 332 gagctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtggg 391
|||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 457 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 398
Query: 392 cttcttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgtt 451
||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 397 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgtt 338
Query: 452 gatgaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctg 511
||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 337 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 278
Query: 512 cttgagcaccttgaagatgtagatcttgtaggtctccacgctcttcttggctttcttctt 571
|||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 277 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttccg 218
Query: 572 gc--ccttcttgccctcgccggcgc------cggacttgcccgcggggaggcgtttctcc 623
| ||||||| ||||||||| || ||| |||||| |||||||| || ||||||
Sbjct: 217 cccgccttcttcccctcgccgctgctcttctcggccttgccggcggggagacgcttctcc 158
Query: 624 gccttcggcttcttccctgccggagccttctccgccttctcggtcgcgggctcctcctcc 683
||||| ||||||||||| ||| | |||||||| |||||||| | ||||||||||| ||||
Sbjct: 157 gccttgggcttcttccccgccagggccttctcggccttctccgccgcgggctcct-ctcc 99
Query: 684 gcgggcttcttcgccgccggctttttctccgccttgggcgccatcgatgc 733
|||||||||||||||| |||||| |||||| |||||||||||| |||||
Sbjct: 98 gcgggcttcttcgccgncggcttcttctcccgcttgggcgccatggatgc 49
>gb|CF313653.1|CF313653 HD--01-N17.g1 OsHDAC1-overexpressing transgenic rice plasmid cDNA
library (HD) Oryza sativa (japonica cultivar-group) cDNA
clone HD--01-N17, mRNA sequence
Length = 525
Score = 517 bits (261), Expect = e-144
Identities = 382/422 (90%), Gaps = 9/422 (2%)
Strand = Plus / Minus
Query: 315 gagacggcgtgcttggcgagctcgccgggtaggacgaggcggacggaggtctggatctcg 374
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 525 gagacggcgtgcttggcgagctcgccggggaggacgaggcggacggaggtctggatctcc 466
Query: 375 cgggaggtgatggtgggcttcttgttgtagcgggcgagcttggcggcctccgcggcgagc 434
|||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 465 cgggaggtgatggtgggcttcttgttgtagcgggcgagcttggcggactctccggcgagc 406
Query: 435 ttctcgaagatgtcgttgatgaaggaattcatgatggacatggccttggacgagatgccg 494
|||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 405 ttctcgaagatgtcattgatgaaggagttcatgatggacatggccttggaggagatgccg 346
Query: 495 atgtcggggtgcacctgcttgagcaccttgaagatgtagatcttgtaggtctccacgctc 554
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 345 atgtcggggtgaacctgcttgagcaccttgaagatgtagatcttgtaggtctcgacgctc 286
Query: 555 ttcttggctttcttcttgc---ccttcttgccctcgccggcgc------cggacttgccc 605
||||| || |||||| | | ||||||| ||||||||| || ||| ||||||
Sbjct: 285 ttcttcgccttcttcctccccgccttcttcccctcgccgctgcccttctcggccttgccg 226
Query: 606 gcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgccttctcg 665
|||||||| || ||||||||||| ||||||||||| || || |||||||| ||||||||
Sbjct: 225 gcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctcc 166
Query: 666 gtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgccttgggcgcc 725
| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 165 gctgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgcc 106
Query: 726 at 727
||
Sbjct: 105 at 104
>gb|AU097673.1|AU097673 AU097673 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30833, mRNA sequence
Length = 697
Score = 470 bits (237), Expect = e-130
Identities = 338/372 (90%), Gaps = 11/372 (2%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
|||||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 476 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 417
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 357
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 356 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 297
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 296 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 237
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttcttgcc---cttcttg 581
||||||||||||||||||||||||||||||||||| | |||||| | || ||||||
Sbjct: 236 aagatgtagatcttgtaggtctccacgctcttcttccccttcttcctcccggccttcttc 177
Query: 582 ccctcgccggcgc--------cggacttgcccgcggggaggcgtttctccgccttcggct 633
||||||||||||| || ||| ||||||||||| || ||||||||||| ||||
Sbjct: 176 ccctcgccggcgccgccttctcgcccttccccgcggggagccgcttctccgccttgggct 117
Query: 634 tcttccctgccg 645
||||||| ||||
Sbjct: 116 tcttccccgccg 105
Score = 60.0 bits (30), Expect = 2e-006
Identities = 55/61 (90%), Gaps = 2/61 (3%)
Strand = Plus / Minus
Query: 672 ggctcctcctccgcgggcttcttcgccgccggctttttctccgccttgggcgccatcgat 731
|||||||||| || ||||||||||||||| ||||| ||||||| |||||||||||| |||
Sbjct: 85 ggctcctccttcg-gggcttcttcgccgc-ggcttcttctccgncttgggcgccatggat 28
Query: 732 g 732
|
Sbjct: 27 g 27
>gb|CO436072.1|CO436072 OsMR994 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 885
Score = 470 bits (237), Expect = e-130
Identities = 296/315 (93%), Gaps = 3/315 (0%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
|||||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 560 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 501
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 441
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 440 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 381
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 380 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 321
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttctt---gcccttcttg 581
||||||||||||||||||||||||||||||||||| | |||||| | | |||||||
Sbjct: 320 aagatgtagatcttgtaggtctccacgctcttcttccccttcttcctcccggccttcttc 261
Query: 582 ccctcgccggcgccg 596
|||||||||||||||
Sbjct: 260 ccctcgccggcgccg 246
Score = 119 bits (60), Expect = 2e-024
Identities = 72/76 (94%)
Strand = Plus / Minus
Query: 657 gccttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcc 716
|||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 182 gccttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcc 123
Query: 717 ttgggcgccatcgatg 732
||||||||||| ||||
Sbjct: 122 ttgggcgccatggatg 107
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08,
complete sequence
Length = 119500
Score = 470 bits (237), Expect = e-130
Identities = 296/315 (93%), Gaps = 3/315 (0%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
|||||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 27079 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 27020
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27019 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 26960
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 26959 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 26900
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 26899 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 26840
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttctt---gcccttcttg 581
||||||||||||||||||||||||||||||||||| | |||||| | | |||||||
Sbjct: 26839 aagatgtagatcttgtaggtctccacgctcttcttccccttcttcctcccggccttcttc 26780
Query: 582 ccctcgccggcgccg 596
|||||||||||||||
Sbjct: 26779 ccctcgccggcgccg 26765
Score = 119 bits (60), Expect = 2e-024
Identities = 72/76 (94%)
Strand = Plus / Minus
Query: 657 gccttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcc 716
|||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 26701 gccttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcc 26642
Query: 717 ttgggcgccatcgatg 732
||||||||||| ||||
Sbjct: 26641 ttgggcgccatggatg 26626
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10,
complete sequence
Length = 187034
Score = 470 bits (237), Expect = e-130
Identities = 296/315 (93%), Gaps = 3/315 (0%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
|||||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 176397 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 176338
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176337 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 176278
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 176277 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 176218
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 176217 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 176158
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttctt---gcccttcttg 581
||||||||||||||||||||||||||||||||||| | |||||| | | |||||||
Sbjct: 176157 aagatgtagatcttgtaggtctccacgctcttcttccccttcttcctcccggccttcttc 176098
Query: 582 ccctcgccggcgccg 596
|||||||||||||||
Sbjct: 176097 ccctcgccggcgccg 176083
Score = 119 bits (60), Expect = 2e-024
Identities = 72/76 (94%)
Strand = Plus / Minus
Query: 657 gccttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcc 716
|||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 176019 gccttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcc 175960
Query: 717 ttgggcgccatcgatg 732
||||||||||| ||||
Sbjct: 175959 ttgggcgccatggatg 175944
>gb|AACV01012743.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012743, whole
genome shotgun sequence
Length = 27501
Score = 470 bits (237), Expect = e-130
Identities = 296/315 (93%), Gaps = 3/315 (0%)
Strand = Plus / Plus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
|||||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 19997 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 20056
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20057 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 20116
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 20117 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 20176
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 20177 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 20236
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttctt---gcccttcttg 581
||||||||||||||||||||||||||||||||||| | |||||| | | |||||||
Sbjct: 20237 aagatgtagatcttgtaggtctccacgctcttcttccccttcttcctcccggccttcttc 20296
Query: 582 ccctcgccggcgccg 596
|||||||||||||||
Sbjct: 20297 ccctcgccggcgccg 20311
Score = 119 bits (60), Expect = 2e-024
Identities = 72/76 (94%)
Strand = Plus / Plus
Query: 657 gccttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcc 716
|||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 20375 gccttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcc 20434
Query: 717 ttgggcgccatcgatg 732
||||||||||| ||||
Sbjct: 20435 ttgggcgccatggatg 20450
>ref|XM_475912.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 459
Score = 470 bits (237), Expect = e-130
Identities = 296/315 (93%), Gaps = 3/315 (0%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
|||||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 449 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 390
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 330
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 329 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 270
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 269 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 210
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttctt---gcccttcttg 581
||||||||||||||||||||||||||||||||||| | |||||| | | |||||||
Sbjct: 209 aagatgtagatcttgtaggtctccacgctcttcttccccttcttcctcccggccttcttc 150
Query: 582 ccctcgccggcgccg 596
|||||||||||||||
Sbjct: 149 ccctcgccggcgccg 135
Score = 117 bits (59), Expect = 1e-023
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 657 gccttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcc 716
|||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 71 gccttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcc 12
Query: 717 ttgggcgccat 727
|||||||||||
Sbjct: 11 ttgggcgccat 1
>ref|NT_107222.1| Oryza sativa (japonica cultivar-group)
Length = 1298239
Score = 470 bits (237), Expect = e-130
Identities = 296/315 (93%), Gaps = 3/315 (0%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
|||||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 27079 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 27020
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27019 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 26960
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 26959 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 26900
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 26899 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 26840
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttctt---gcccttcttg 581
||||||||||||||||||||||||||||||||||| | |||||| | | |||||||
Sbjct: 26839 aagatgtagatcttgtaggtctccacgctcttcttccccttcttcctcccggccttcttc 26780
Query: 582 ccctcgccggcgccg 596
|||||||||||||||
Sbjct: 26779 ccctcgccggcgccg 26765
Score = 119 bits (60), Expect = 2e-024
Identities = 72/76 (94%)
Strand = Plus / Minus
Query: 657 gccttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcc 716
|||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 26701 gccttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcc 26642
Query: 717 ttgggcgccatcgatg 732
||||||||||| ||||
Sbjct: 26641 ttgggcgccatggatg 26626
Score = 48.1 bits (24), Expect = 0.008
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 430 cgagcttctcgaagatgtcgttgatgaa 457
||||||||||| ||||||||||||||||
Sbjct: 991858 cgagcttctcggagatgtcgttgatgaa 991885
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 470 bits (237), Expect = e-130
Identities = 296/315 (93%), Gaps = 3/315 (0%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
|||||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 10827228 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 10827169
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10827168 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 10827109
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 10827108 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 10827049
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 10827048 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 10826989
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttctt---gcccttcttg 581
||||||||||||||||||||||||||||||||||| | |||||| | | |||||||
Sbjct: 10826988 aagatgtagatcttgtaggtctccacgctcttcttccccttcttcctcccggccttcttc 10826929
Query: 582 ccctcgccggcgccg 596
|||||||||||||||
Sbjct: 10826928 ccctcgccggcgccg 10826914
Score = 335 bits (169), Expect = 2e-089
Identities = 265/297 (89%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
|||||||||||||| ||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 4861003 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 4860944
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
|||||||| || || |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4860943 aggacgagacgaacagaggtctggatctcgcgggaggtgattgtgggcttcttgttgtac 4860884
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
| ||| ||| | ||||||||| ||||||||||||| |||||||||| ||||||||||
Sbjct: 4860883 ctggcaagcctcgcggcctcctgctcgagcttctcgaaaatgtcgttgacgaaggaattc 4860824
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| ||||| || ||||| || |||||||||||||||||||||
Sbjct: 4860823 atgatggacatggccttggaggagattcctatgtctggatgcacctgcttgagcaccttg 4860764
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttcttgcccttcttg 581
||||||||||| || |||||||||||||| ||||| || |||||||| |||||||||
Sbjct: 4860763 aagatgtagattttataggtctccacgcttttcttcgccttcttcttccccttcttg 4860707
Score = 119 bits (60), Expect = 2e-024
Identities = 72/76 (94%)
Strand = Plus / Minus
Query: 657 gccttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcc 716
|||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 10826850 gccttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcc 10826791
Query: 717 ttgggcgccatcgatg 732
||||||||||| ||||
Sbjct: 10826790 ttgggcgccatggatg 10826775
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 518 caccttgaagatgtagatcttgtaggtct 546
||||||||||||||||||||||| |||||
Sbjct: 7877597 caccttgaagatgtagatcttgttggtct 7877625
Score = 48.1 bits (24), Expect = 0.008
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 430 cgagcttctcgaagatgtcgttgatgaa 457
||||||||||| ||||||||||||||||
Sbjct: 11772113 cgagcttctcggagatgtcgttgatgaa 11772140
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 677 ctcctccgcgggcttcttcgccgccggctttttctccgccttgggcgccatc 728
|||||| || ||||||||| | |||||||| ||||||||||| ||| |||||
Sbjct: 4860632 ctcctctgctggcttcttctctgccggcttcttctccgccttcggcaccatc 4860581
Score = 48.1 bits (24), Expect = 0.008
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 430 cgagcttctcgaagatgtcgttgatgaa 457
|||||||||||||||||||||| |||||
Sbjct: 849359 cgagcttctcgaagatgtcgttaatgaa 849332
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 470 bits (237), Expect = e-130
Identities = 296/315 (93%), Gaps = 3/315 (0%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
|||||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 28127541 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 28127482
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28127481 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 28127422
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 28127421 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 28127362
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 28127361 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 28127302
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttctt---gcccttcttg 581
||||||||||||||||||||||||||||||||||| | |||||| | | |||||||
Sbjct: 28127301 aagatgtagatcttgtaggtctccacgctcttcttccccttcttcctcccggccttcttc 28127242
Query: 582 ccctcgccggcgccg 596
|||||||||||||||
Sbjct: 28127241 ccctcgccggcgccg 28127227
Score = 335 bits (169), Expect = 2e-089
Identities = 265/297 (89%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
|||||||||||||| ||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 22161316 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 22161257
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
|||||||| || || |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 22161256 aggacgagacgaacagaggtctggatctcgcgggaggtgattgtgggcttcttgttgtac 22161197
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
| ||| ||| | ||||||||| ||||||||||||| |||||||||| ||||||||||
Sbjct: 22161196 ctggcaagcctcgcggcctcctgctcgagcttctcgaaaatgtcgttgacgaaggaattc 22161137
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| ||||| || ||||| || |||||||||||||||||||||
Sbjct: 22161136 atgatggacatggccttggaggagattcctatgtctggatgcacctgcttgagcaccttg 22161077
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttcttgcccttcttg 581
||||||||||| || |||||||||||||| ||||| || |||||||| |||||||||
Sbjct: 22161076 aagatgtagattttataggtctccacgcttttcttcgccttcttcttccccttcttg 22161020
Score = 119 bits (60), Expect = 2e-024
Identities = 72/76 (94%)
Strand = Plus / Minus
Query: 657 gccttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcc 716
|||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 28127163 gccttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcc 28127104
Query: 717 ttgggcgccatcgatg 732
||||||||||| ||||
Sbjct: 28127103 ttgggcgccatggatg 28127088
Score = 65.9 bits (33), Expect = 3e-008
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 508 cctgcttgagcaccttgaagatgtagatcttgtaggtctccacgctcttcttg 560
||||||| ||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 6814313 cctgcttctgcaccttgaagatgtagatattgtaggtctccatactcttcttg 6814365
Score = 60.0 bits (30), Expect = 2e-006
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 435 ttctcgaagatgtcgttgatgaaggaattcatgatgga 472
|||||||||||||| ||||||||||| |||||||||||
Sbjct: 8223364 ttctcgaagatgtcattgatgaaggagttcatgatgga 8223401
Score = 54.0 bits (27), Expect = 1e-004
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 431 gagcttctcgaagatgtcgttgatgaa 457
|||||||||||||||||||||||||||
Sbjct: 3719855 gagcttctcgaagatgtcgttgatgaa 3719881
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 518 caccttgaagatgtagatcttgtaggtct 546
||||||||||||||||||||||| |||||
Sbjct: 25177910 caccttgaagatgtagatcttgttggtct 25177938
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 514 tgagcaccttgaagatgtagatcttgtaggtctccac 550
|||| |||||||| ||||| |||||||||||||||||
Sbjct: 8223442 tgagtaccttgaatatgtaaatcttgtaggtctccac 8223478
Score = 48.1 bits (24), Expect = 0.008
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 430 cgagcttctcgaagatgtcgttgatgaa 457
||||||||||| ||||||||||||||||
Sbjct: 29072426 cgagcttctcggagatgtcgttgatgaa 29072453
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 677 ctcctccgcgggcttcttcgccgccggctttttctccgccttgggcgccatc 728
|||||| || ||||||||| | |||||||| ||||||||||| ||| |||||
Sbjct: 22160945 ctcctctgctggcttcttctctgccggcttcttctccgccttcggcaccatc 22160894
Score = 48.1 bits (24), Expect = 0.008
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 430 cgagcttctcgaagatgtcgttgatgaa 457
|||||||||||||||||||||| |||||
Sbjct: 18149672 cgagcttctcgaagatgtcgttaatgaa 18149645
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 432 agcttctcgaagatgtcgttgatgaa 457
||||||||||||||||| ||||||||
Sbjct: 6128351 agcttctcgaagatgtctttgatgaa 6128326
Score = 42.1 bits (21), Expect = 0.46
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 525 aagatgtagatcttgtaggtctccacgct 553
|||||||||||||| |||||||| |||||
Sbjct: 6128080 aagatgtagatcttataggtctctacgct 6128052
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 470 bits (237), Expect = e-130
Identities = 296/315 (93%), Gaps = 3/315 (0%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
|||||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 28392155 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 28392096
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28392095 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 28392036
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 28392035 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 28391976
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 28391975 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 28391916
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttctt---gcccttcttg 581
||||||||||||||||||||||||||||||||||| | |||||| | | |||||||
Sbjct: 28391915 aagatgtagatcttgtaggtctccacgctcttcttccccttcttcctcccggccttcttc 28391856
Query: 582 ccctcgccggcgccg 596
|||||||||||||||
Sbjct: 28391855 ccctcgccggcgccg 28391841
Score = 335 bits (169), Expect = 2e-089
Identities = 265/297 (89%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
|||||||||||||| ||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 22480461 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 22480402
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
|||||||| || || |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 22480401 aggacgagacgaacagaggtctggatctcgcgggaggtgattgtgggcttcttgttgtac 22480342
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
| ||| ||| | ||||||||| ||||||||||||| |||||||||| ||||||||||
Sbjct: 22480341 ctggcaagcctcgcggcctcctgctcgagcttctcgaaaatgtcgttgacgaaggaattc 22480282
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| ||||| || ||||| || |||||||||||||||||||||
Sbjct: 22480281 atgatggacatggccttggaggagattcctatgtctggatgcacctgcttgagcaccttg 22480222
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttcttgcccttcttg 581
||||||||||| || |||||||||||||| ||||| || |||||||| |||||||||
Sbjct: 22480221 aagatgtagattttataggtctccacgcttttcttcgccttcttcttccccttcttg 22480165
Score = 119 bits (60), Expect = 2e-024
Identities = 72/76 (94%)
Strand = Plus / Minus
Query: 657 gccttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcc 716
|||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 28391777 gccttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcc 28391718
Query: 717 ttgggcgccatcgatg 732
||||||||||| ||||
Sbjct: 28391717 ttgggcgccatggatg 28391702
Score = 65.9 bits (33), Expect = 3e-008
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 508 cctgcttgagcaccttgaagatgtagatcttgtaggtctccacgctcttcttg 560
||||||| ||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 6896155 cctgcttctgcaccttgaagatgtagatattgtaggtctccatactcttcttg 6896207
Score = 54.0 bits (27), Expect = 1e-004
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 431 gagcttctcgaagatgtcgttgatgaa 457
|||||||||||||||||||||||||||
Sbjct: 3720743 gagcttctcgaagatgtcgttgatgaa 3720769
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 518 caccttgaagatgtagatcttgtaggtct 546
||||||||||||||||||||||| |||||
Sbjct: 25447111 caccttgaagatgtagatcttgttggtct 25447139
Score = 48.1 bits (24), Expect = 0.008
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 430 cgagcttctcgaagatgtcgttgatgaa 457
||||||||||| ||||||||||||||||
Sbjct: 29356934 cgagcttctcggagatgtcgttgatgaa 29356961
Score = 48.1 bits (24), Expect = 0.008
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 677 ctcctccgcgggcttcttcgccgccggctttttctccgccttgggcgccatc 728
|||||| || ||||||||| | |||||||| ||||||||||| ||| |||||
Sbjct: 22480090 ctcctctgctggcttcttctctgccggcttcttctccgccttcggcaccatc 22480039
Score = 48.1 bits (24), Expect = 0.008
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 430 cgagcttctcgaagatgtcgttgatgaa 457
|||||||||||||||||||||| |||||
Sbjct: 18422090 cgagcttctcgaagatgtcgttaatgaa 18422063
Score = 44.1 bits (22), Expect = 0.12
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 432 agcttctcgaagatgtcgttgatgaa 457
||||||||||||||||| ||||||||
Sbjct: 6238958 agcttctcgaagatgtctttgatgaa 6238933
Score = 42.1 bits (21), Expect = 0.46
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 525 aagatgtagatcttgtaggtctccacgct 553
|||||||||||||| |||||||| |||||
Sbjct: 6238688 aagatgtagatcttataggtctctacgct 6238660
>gb|CF307934.1|CF307934 ABF--01-I21.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--01-I21, mRNA sequence
Length = 504
Score = 466 bits (235), Expect = e-129
Identities = 265/275 (96%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
|||||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 315 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 256
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 196
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 195 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 136
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 135 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 76
Query: 525 aagatgtagatcttgtaggtctccacgctcttctt 559
|||||||||||||||||||||||||||||||||||
Sbjct: 75 aagatgtagatcttgtaggtctccacgctcttctt 41
>gb|CA998897.1|CA998897 S345N_D05 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 460
Score = 464 bits (234), Expect = e-128
Identities = 264/274 (96%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
|||||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 274 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 215
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 155
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 154 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 95
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 94 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 35
Query: 525 aagatgtagatcttgtaggtctccacgctcttct 558
||||||||||||||||||||||||||||||||||
Sbjct: 34 aagatgtagatcttgtaggtctccacgctcttct 1
>gb|AU032007.1|AU032007 AU032007 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3125_8Z, mRNA sequence
Length = 581
Score = 454 bits (229), Expect = e-125
Identities = 263/275 (95%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
|||||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 363 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 304
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 244
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 243 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 184
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 183 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 124
Query: 525 aagatgtagatcttgtaggtctccacgctcttctt 559
||||||||||||||||||||||||| | |||||||
Sbjct: 123 aagatgtagatcttgtaggtctccangntcttctt 89
Score = 42.1 bits (21), Expect = 0.46
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 603 cccgcggggaggcgtttctccgccttcggcttc 635
||||||||||| || ||||||||||| ||||||
Sbjct: 33 cccgcggggagccgcttctccgccttgggcttc 1
>gb|AU070936.1|AU070936 AU070936 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10485_1A, mRNA sequence
Length = 712
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||||||||| || ||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 524 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 465
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 405
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 404 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 345
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 344 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 285
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 284 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 240
Score = 165 bits (83), Expect = 5e-038
Identities = 126/139 (90%), Gaps = 1/139 (0%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 195 cttgccggcggggagccgcttctccgccttgggcttcttcccggccggggccttctcggc 136
Query: 659 cttct-cggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcct 717
||||| | | |||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 135 cttctnccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcct 76
Query: 718 tgggcgccatcgatgctgc 736
|||||||||| ||||||||
Sbjct: 75 tgggcgccatggatgctgc 57
>gb|CA998848.1|CA998848 S345M_G12 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 564
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||||||||| || ||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 339 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 280
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 220
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 219 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 160
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 159 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 100
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 99 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 55
>gb|CB662156.1|CB662156 OSJNEd05O18.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05O18 5', mRNA sequence
Length = 702
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Minus
Query: 275 ctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgag 334
|||||| ||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||
Sbjct: 510 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 451
Query: 335 ctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 394
||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 450 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 391
Query: 395 cttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgat 454
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 390 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 331
Query: 455 gaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgctt 514
|||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 330 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 271
Query: 515 gagcaccttgaagatgtagatcttgtaggtctccacgctcttctt 559
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 270 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttctt 226
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 177 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 118
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 117 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 58
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 57 gggcgccatggatgctgc 40
>gb|CB662157.1|CB662157 OSJNEd05O18.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05O18 3', mRNA sequence
Length = 827
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Plus
Query: 275 ctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgag 334
|||||| ||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||
Sbjct: 245 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 304
Query: 335 ctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 394
||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 305 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 364
Query: 395 cttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgat 454
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 365 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 424
Query: 455 gaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgctt 514
|||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 425 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 484
Query: 515 gagcaccttgaagatgtagatcttgtaggtctccacgctcttctt 559
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 485 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttctt 529
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 578 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 637
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 638 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 697
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 698 gggcgccatggatgctgc 715
>gb|CF278594.1|CF278594 14ETL--04-I24.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--04-I24, mRNA sequence
Length = 567
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Minus
Query: 275 ctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgag 334
|||||| ||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||
Sbjct: 535 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 476
Query: 335 ctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 394
||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 475 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 416
Query: 395 cttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgat 454
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 415 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 356
Query: 455 gaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgctt 514
|||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 355 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 296
Query: 515 gagcaccttgaagatgtagatcttgtaggtctccacgctcttctt 559
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 295 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttctt 251
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 202 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 143
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 142 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 83
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 82 gggcgccatggatgctgc 65
>gb|CF292227.1|CF292227 14ROOT--02-P16.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-P16, mRNA sequence
Length = 623
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Minus
Query: 275 ctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgag 334
|||||| ||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||
Sbjct: 544 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 485
Query: 335 ctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 394
||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 484 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 425
Query: 395 cttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgat 454
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 424 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 365
Query: 455 gaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgctt 514
|||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 364 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 305
Query: 515 gagcaccttgaagatgtagatcttgtaggtctccacgctcttctt 559
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 304 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttctt 260
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 211 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 152
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 151 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 92
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 91 gggcgccatggatgctgc 74
>gb|CF333473.1|CF333473 JMT--02-G04.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--02-G04, mRNA sequence
Length = 610
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Minus
Query: 275 ctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgag 334
|||||| ||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||
Sbjct: 554 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 495
Query: 335 ctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 394
||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 494 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 435
Query: 395 cttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgat 454
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 434 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 375
Query: 455 gaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgctt 514
|||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 374 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 315
Query: 515 gagcaccttgaagatgtagatcttgtaggtctccacgctcttctt 559
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 314 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttctt 270
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 221 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 162
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 161 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 102
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 101 gggcgccatggatgctgc 84
>gb|CV731987.1|CV731987 FLO--06-E06.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--06-E06,
mRNA sequence
Length = 493
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Plus
Query: 275 ctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgag 334
|||||| ||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||
Sbjct: 198 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 257
Query: 335 ctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 394
||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 258 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 317
Query: 395 cttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgat 454
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 318 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 377
Query: 455 gaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgctt 514
|||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 378 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 437
Query: 515 gagcaccttgaagatgtagatcttgtaggtctccacgctcttctt 559
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 438 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttctt 482
>gb|BP184585.1|BP184585 BP184585 pNS rice panicle cDNA, flowering stage Oryza sativa
(japonica cultivar-group) cDNA clone 13YPG059, mRNA
sequence
Length = 626
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||||||||| || ||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 521 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 462
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 402
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 401 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 342
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 341 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 282
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 281 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 237
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 192 cttgccggcggggagccgcttctccgccttgggcttcttcccggccggggccttctcggc 133
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 132 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 73
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 72 gggcgccatggatgctgc 55
>gb|BP184926.1|BP184926 BP184926 pNS rice callus cDNA Oryza sativa (japonica
cultivar-group) cDNA clone 23C4AG024, mRNA sequence
Length = 663
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||||||||| || ||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 533 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 474
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 414
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 413 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 354
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 353 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 294
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 293 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 249
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 204 cttgccggcggggagccgcttctccgccttgggcttcttcccggccggggccttctcggc 145
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 144 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 85
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 84 gggcgccatggatgctgc 67
>dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0009G03
Length = 163526
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Plus
Query: 275 ctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgag 334
|||||| ||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||
Sbjct: 162275 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 162334
Query: 335 ctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 394
||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 162335 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 162394
Query: 395 cttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgat 454
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 162395 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 162454
Query: 455 gaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgctt 514
|||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 162455 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 162514
Query: 515 gagcaccttgaagatgtagatcttgtaggtctccacgctcttctt 559
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 162515 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttctt 162559
Score = 440 bits (222), Expect = e-121
Identities = 264/278 (94%)
Strand = Plus / Plus
Query: 282 gaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccg 341
||||| ||||||||||| ||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 149343 gaagtaaacttggtgacggccttcgtgccctcggagacggcgtgcttggcgagctcgccg 149402
Query: 342 ggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttg 401
|| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 149403 gggaggacgaggcggacggaggtctgaatctcccgggaggtgatggtgggcttcttgttg 149462
Query: 402 tagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaa 461
||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 149463 tagcgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggag 149522
Query: 462 ttcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcacc 521
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 149523 ttcatgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcacc 149582
Query: 522 ttgaagatgtagatcttgtaggtctccacgctcttctt 559
|||||||||||||||||||||||||| |||||||||||
Sbjct: 149583 ttgaagatgtagatcttgtaggtctcgacgctcttctt 149620
Score = 432 bits (218), Expect = e-118
Identities = 278/298 (93%)
Strand = Plus / Plus
Query: 272 aatctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggc 331
|||||||| || ||||||||||| || ||||| ||||| || |||||||||||||||||
Sbjct: 124909 aatctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 124968
Query: 332 gagctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtggg 391
|||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 124969 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 125028
Query: 392 cttcttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgtt 451
||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 125029 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgtt 125088
Query: 452 gatgaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctg 511
||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 125089 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 125148
Query: 512 cttgagcaccttgaagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
|||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 125149 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 125206
Score = 412 bits (208), Expect = e-112
Identities = 268/288 (93%)
Strand = Plus / Plus
Query: 282 gaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccg 341
|||||||||||||| || ||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 142730 gaagtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccg 142789
Query: 342 ggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttg 401
|| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 142790 gggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttg 142849
Query: 402 tagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaa 461
||||| ||||||||||||| ||| ||||||||||||||||||| || |||||||||||
Sbjct: 142850 tagcgcgcgagcttggcggactctccggcgagcttctcgaagatatcattgatgaaggag 142909
Query: 462 ttcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcacc 521
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 142910 ttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcacc 142969
Query: 522 ttgaagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
|||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 142970 ttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 143017
Score = 188 bits (95), Expect = 3e-045
Identities = 125/135 (92%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| ||||||||||| ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 143056 cttgccggcggggaggcgcttctccgccttgggcttcttccccgccggggccttctcggc 143115
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 143116 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 143175
Query: 719 gggcgccatcgatgc 733
||||||||| |||||
Sbjct: 143176 gggcgccatggatgc 143190
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 162608 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 162667
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 162668 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 162727
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 162728 gggcgccatggatgctgc 162745
Score = 172 bits (87), Expect = 2e-040
Identities = 123/135 (91%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||| | |||||||| ||
Sbjct: 125245 cttgccggcggggagacgcttctccgccttgggcttcttccccgccagggccttctcggc 125304
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 125305 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 125364
Query: 719 gggcgccatcgatgc 733
||||||||| |||||
Sbjct: 125365 gggcgccatggatgc 125379
Score = 167 bits (84), Expect = 1e-038
Identities = 123/136 (90%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| || || |||||||| ||
Sbjct: 149669 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 149728
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 149729 cttctctgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 149788
Query: 719 gggcgccatcgatgct 734
||||||||| ||||||
Sbjct: 149789 gggcgccatggatgct 149804
>dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0030H07
Length = 168253
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||||||||| || ||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 78643 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 78584
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78583 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 78524
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 78523 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 78464
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 78463 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 78404
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 78403 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 78359
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Plus
Query: 275 ctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgag 334
|||||| ||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||
Sbjct: 63596 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 63655
Query: 335 ctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 394
||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 63656 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 63715
Query: 395 cttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgat 454
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 63716 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 63775
Query: 455 gaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgctt 514
|||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 63776 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 63835
Query: 515 gagcaccttgaagatgtagatcttgtaggtctccacgctcttctt 559
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 63836 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttctt 63880
Score = 440 bits (222), Expect = e-121
Identities = 264/278 (94%)
Strand = Plus / Plus
Query: 282 gaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccg 341
||||| ||||||||||| ||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 50664 gaagtaaacttggtgacggccttcgtgccctcggagacggcgtgcttggcgagctcgccg 50723
Query: 342 ggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttg 401
|| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 50724 gggaggacgaggcggacggaggtctgaatctcccgggaggtgatggtgggcttcttgttg 50783
Query: 402 tagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaa 461
||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 50784 tagcgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggag 50843
Query: 462 ttcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcacc 521
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 50844 ttcatgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcacc 50903
Query: 522 ttgaagatgtagatcttgtaggtctccacgctcttctt 559
|||||||||||||||||||||||||| |||||||||||
Sbjct: 50904 ttgaagatgtagatcttgtaggtctcgacgctcttctt 50941
Score = 432 bits (218), Expect = e-118
Identities = 278/298 (93%)
Strand = Plus / Plus
Query: 272 aatctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggc 331
|||||||| || ||||||||||| || ||||| ||||| || |||||||||||||||||
Sbjct: 26230 aatctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 26289
Query: 332 gagctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtggg 391
|||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 26290 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 26349
Query: 392 cttcttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgtt 451
||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 26350 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgtt 26409
Query: 452 gatgaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctg 511
||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 26410 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 26469
Query: 512 cttgagcaccttgaagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
|||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 26470 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 26527
Score = 412 bits (208), Expect = e-112
Identities = 268/288 (93%)
Strand = Plus / Plus
Query: 282 gaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccg 341
|||||||||||||| || ||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 44051 gaagtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccg 44110
Query: 342 ggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttg 401
|| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 44111 gggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttg 44170
Query: 402 tagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaa 461
||||| ||||||||||||| ||| ||||||||||||||||||| || |||||||||||
Sbjct: 44171 tagcgcgcgagcttggcggactctccggcgagcttctcgaagatatcattgatgaaggag 44230
Query: 462 ttcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcacc 521
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 44231 ttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcacc 44290
Query: 522 ttgaagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
|||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 44291 ttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 44338
Score = 188 bits (95), Expect = 3e-045
Identities = 125/135 (92%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| ||||||||||| ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 44377 cttgccggcggggaggcgcttctccgccttgggcttcttccccgccggggccttctcggc 44436
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 44437 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 44496
Query: 719 gggcgccatcgatgc 733
||||||||| |||||
Sbjct: 44497 gggcgccatggatgc 44511
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 78314 cttgccggcggggagccgcttctccgccttgggcttcttcccggccggggccttctcggc 78255
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 78254 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 78195
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 78194 gggcgccatggatgctgc 78177
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 63929 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 63988
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 63989 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 64048
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 64049 gggcgccatggatgctgc 64066
Score = 172 bits (87), Expect = 2e-040
Identities = 123/135 (91%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||| | |||||||| ||
Sbjct: 26566 cttgccggcggggagacgcttctccgccttgggcttcttccccgccagggccttctcggc 26625
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 26626 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 26685
Query: 719 gggcgccatcgatgc 733
||||||||| |||||
Sbjct: 26686 gggcgccatggatgc 26700
Score = 167 bits (84), Expect = 1e-038
Identities = 123/136 (90%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| || || |||||||| ||
Sbjct: 50990 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 51049
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 51050 cttctctgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 51109
Query: 719 gggcgccatcgatgct 734
||||||||| ||||||
Sbjct: 51110 gggcgccatggatgct 51125
>gb|AACV01000215.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000215, whole
genome shotgun sequence
Length = 50442
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||||||||| || ||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 27769 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 27710
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27709 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 27650
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 27649 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 27590
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 27589 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 27530
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 27529 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 27485
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Plus
Query: 275 ctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgag 334
|||||| ||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||
Sbjct: 12722 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 12781
Query: 335 ctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 394
||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 12782 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 12841
Query: 395 cttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgat 454
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 12842 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 12901
Query: 455 gaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgctt 514
|||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 12902 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 12961
Query: 515 gagcaccttgaagatgtagatcttgtaggtctccacgctcttctt 559
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 12962 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttctt 13006
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 27440 cttgccggcggggagccgcttctccgccttgggcttcttcccggccggggccttctcggc 27381
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 27380 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 27321
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 27320 gggcgccatggatgctgc 27303
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 13055 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 13114
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 13115 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 13174
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 13175 gggcgccatggatgctgc 13192
Score = 167 bits (84), Expect = 1e-038
Identities = 123/136 (90%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| || || |||||||| ||
Sbjct: 113 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 172
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 173 cttctctgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 232
Query: 719 gggcgccatcgatgct 734
||||||||| ||||||
Sbjct: 233 gggcgccatggatgct 248
Score = 91.7 bits (46), Expect = 6e-016
Identities = 59/62 (95%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 495 atgtcggggtgcacctgcttgagcaccttgaagatgtagatcttgtaggtctccacgctc 554
||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 atgtcggggtgaac-tgcttgagcaccttgaagatgtagatcttgtaggtctcgacgctc 59
Query: 555 tt 556
||
Sbjct: 60 tt 61
>ref|NM_184407.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 462
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Minus
Query: 275 ctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgag 334
|||||| ||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||
Sbjct: 462 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 403
Query: 335 ctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 394
||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 402 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 343
Query: 395 cttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgat 454
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 342 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 283
Query: 455 gaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgctt 514
|||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 282 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 223
Query: 515 gagcaccttgaagatgtagatcttgtaggtctccacgctcttctt 559
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 222 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttctt 178
Score = 168 bits (85), Expect = 3e-039
Identities = 118/129 (91%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 129 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 70
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 69 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 10
Query: 719 gggcgccat 727
|||||||||
Sbjct: 9 gggcgccat 1
>ref|NM_184409.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 468
Score = 454 bits (229), Expect = e-125
Identities = 271/285 (95%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||||||||| || ||||| ||||| || ||||||||||||||||| |||||||||||
Sbjct: 458 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 399
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 339
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 338 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 279
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 278 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 219
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 218 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 174
Score = 168 bits (85), Expect = 3e-039
Identities = 118/129 (91%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 129 cttgccggcggggagccgcttctccgccttgggcttcttcccggccggggccttctcggc 70
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 69 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 10
Query: 719 gggcgccat 727
|||||||||
Sbjct: 9 gggcgccat 1
>gb|CA755827.1|CA755827 BR030029000_PLATE_B12_90_096.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030029000_PLATE_B12_90_096.ab1 similar to putative
histone H2B [Oryza sativa (japonica cultivar-group)],
mRNA sequence
Length = 636
Score = 452 bits (228), Expect = e-124
Identities = 293/315 (93%), Gaps = 3/315 (0%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
|||||||||||||| ||||| ||||| || ||||||||||||| |||||||||||||||
Sbjct: 490 gtgaacttggtgacggccttggtgccctcggagacggcgtgctnggcgagctcgccgggg 431
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 371
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 370 cgggcgagctnggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 311
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 310 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 251
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttctt---gcccttcttg 581
||||||||||||| ||||||||||||||||||||| | |||||| | | |||||||
Sbjct: 250 aagatgtagatctngtaggtctccacgctcttcttccccttcttcctcccggccttcttc 191
Query: 582 ccctcgccggcgccg 596
|||||||||||||||
Sbjct: 190 ccctcgccggcgccg 176
Score = 119 bits (60), Expect = 2e-024
Identities = 72/76 (94%)
Strand = Plus / Minus
Query: 657 gccttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcc 716
|||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 112 gccttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcc 53
Query: 717 ttgggcgccatcgatg 732
||||||||||| ||||
Sbjct: 52 ttgggcgccatggatg 37
>gb|CF292148.1|CF292148 14ROOT--02-N19.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-N19, mRNA sequence
Length = 549
Score = 448 bits (226), Expect = e-123
Identities = 265/278 (95%)
Strand = Plus / Minus
Query: 282 gaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccg 341
||||||||||||||||| ||||| ||||| || ||||||||||||||||| |||||||||
Sbjct: 546 gaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccg 487
Query: 342 ggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttg 401
|| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 486 gggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttg 427
Query: 402 tagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaa 461
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 426 tagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggag 367
Query: 462 ttcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcacc 521
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 366 ttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcacc 307
Query: 522 ttgaagatgtagatcttgtaggtctccacgctcttctt 559
|||||||||||||||||||||||||| |||||||||||
Sbjct: 306 ttgaagatgtagatcttgtaggtctcgacgctcttctt 269
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 220 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 161
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 160 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 101
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 100 gggcgccatggatgctgc 83
>gb|CF291164.1|CF291164 14ROOT--01-H18.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-H18, mRNA sequence
Length = 594
Score = 446 bits (225), Expect = e-123
Identities = 270/285 (94%)
Strand = Plus / Plus
Query: 275 ctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgag 334
|||||| ||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||
Sbjct: 200 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 259
Query: 335 ctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 394
||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 260 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 319
Query: 395 cttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgat 454
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 320 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 379
Query: 455 gaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgctt 514
|||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 380 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 439
Query: 515 gagcaccttgaagatgtagatcttgtaggtctccacgctcttctt 559
||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 440 gagcaccttgaagatgtagatcttgtaagtctcgacgctcttctt 484
Score = 67.9 bits (34), Expect = 8e-009
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 533 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 592
Query: 659 ct 660
||
Sbjct: 593 ct 594
>gb|CF292040.1|CF292040 14ROOT--02-L10.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-L10, mRNA sequence
Length = 624
Score = 446 bits (225), Expect = e-123
Identities = 270/285 (94%)
Strand = Plus / Minus
Query: 275 ctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgag 334
|||||| ||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||
Sbjct: 536 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 477
Query: 335 ctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 394
||||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||||
Sbjct: 476 ctcgccggggaggacgaggcggacggcggtctggacctcccgggaggtgatggtgggctt 417
Query: 395 cttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgat 454
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 416 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 357
Query: 455 gaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgctt 514
|||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 356 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 297
Query: 515 gagcaccttgaagatgtagatcttgtaggtctccacgctcttctt 559
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 296 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttctt 252
Score = 178 bits (90), Expect = 3e-042
Identities = 126/138 (91%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct: 203 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 144
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 143 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 84
Query: 719 gggcgccatcgatgctgc 736
||||||||| ||||||||
Sbjct: 83 gggcgccatggatgctgc 66
>gb|CV730234.1|CV730234 FLO--03-K21.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--03-K21,
mRNA sequence
Length = 531
Score = 446 bits (225), Expect = e-123
Identities = 270/285 (94%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||| |||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 482 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 423
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 363
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 362 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 303
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 302 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 243
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 242 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 198
Score = 135 bits (68), Expect = 4e-029
Identities = 107/120 (89%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| || || |||||||| ||
Sbjct: 159 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 100
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 99 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgcctt 40
>gb|AACV01000194.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000194, whole
genome shotgun sequence
Length = 30874
Score = 446 bits (225), Expect = e-123
Identities = 270/285 (94%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||| |||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 19327 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 19268
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19267 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 19208
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 19207 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 19148
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 19147 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 19088
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 19087 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 19043
Score = 157 bits (79), Expect = 1e-035
Identities = 121/135 (89%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| || || |||||||| ||
Sbjct: 19004 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 18945
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 18944 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgcctt 18885
Query: 719 gggcgccatcgatgc 733
||||||||| |||||
Sbjct: 18884 gggcgccatggatgc 18870
>ref|NM_184371.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 462
Score = 446 bits (225), Expect = e-123
Identities = 270/285 (94%)
Strand = Plus / Minus
Query: 285 gtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccgggt 344
||||| |||||||| ||||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 452 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 393
Query: 345 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 333
Query: 405 cgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaattc 464
|||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 332 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 273
Query: 465 atgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcaccttg 524
|||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct: 272 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 213
Query: 525 aagatgtagatcttgtaggtctccacgctcttcttggctttcttc 569
||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct: 212 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 168
Score = 153 bits (77), Expect = 2e-034
Identities = 116/129 (89%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| || || |||||||| ||
Sbjct: 129 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 70
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttctccgcctt 718
|||||| | |||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 69 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgcctt 10
Query: 719 gggcgccat 727
|||||||||
Sbjct: 9 gggcgccat 1
>gb|AU031069.1|AU031069 AU031069 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60725_2Z, mRNA sequence
Length = 441
Score = 442 bits (223), Expect = e-121
Identities = 269/285 (94%)
Strand = Plus / Minus
Query: 275 ctaagacgaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgag 334
|||||| ||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||
Sbjct: 322 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 263
Query: 335 ctcgccgggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggctt 394
||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 262 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 203
Query: 395 cttgttgtagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgat 454
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 202 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 143
Query: 455 gaaggaattcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgctt 514
|||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 142 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 83
Query: 515 gagcaccttgaagatgtagatcttgtaggtctccacgctcttctt 559
|||||||||| |||||||||||||||||||||| | |||||||||
Sbjct: 82 gagcaccttgnagatgtagatcttgtaggtctcgangctcttctt 38
>gb|AU082356.1|AU082356 AU082356 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C53106, mRNA sequence
Length = 583
Score = 440 bits (222), Expect = e-121
Identities = 264/278 (94%)
Strand = Plus / Minus
Query: 282 gaagtgaacttggtgaccgcctttgtgccttcagagacggcgtgcttggcgagctcgccg 341
||||| ||||||||||| ||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 438 gaagtaaacttggtgacggccttcgtgccctcggagacggcgtgcttggcgagctcgccg 379
Query: 342 ggtaggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttg 401
|| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 378 gggaggacgaggcggacggaggtctgaatctcccgggaggtgatggtgggcttcttgttg 319
Query: 402 tagcgggcgagcttggcggcctccgcggcgagcttctcgaagatgtcgttgatgaaggaa 461
||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 318 tagcgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggag 259
Query: 462 ttcatgatggacatggccttggacgagatgccgatgtcggggtgcacctgcttgagcacc 521
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 258 ttcatgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcacc 199
Query: 522 ttgaagatgtagatcttgtaggtctccacgctcttctt 559
|||||||||||||||||||||||||| |||||||||||
Sbjct: 198 ttgaagatgtagatcttgtaggtctcgacgctcttctt 161
Score = 95.6 bits (48), Expect = 4e-017
Identities = 96/113 (84%)
Strand = Plus / Minus
Query: 599 cttgcccgcggggaggcgtttctccgccttcggcttcttccctgccggagccttctccgc 658
|||||| |||||||| || ||||||||||| ||||||||||| || || |||||||| |
Sbjct: 113 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggg 54
Query: 659 cttctcggtcgcgggctcctcctccgcgggcttcttcgccgccggctttttct 711
|||||| | ||||||||||| || || |||||||||||| | |||||| ||||
Sbjct: 53 cttctctgccgcgggctcctncttcgngggcttcttcgcggncggcttcttct 1
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,354,693
Number of Sequences: 438736
Number of extensions: 1354693
Number of successful extensions: 14427
Number of sequences better than 0.5: 546
Number of HSP's better than 0.5 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9181
Number of HSP's gapped (non-prelim): 4945
length of query: 818
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 797
effective length of database: 2,791,206,460
effective search space: 2224591548620
effective search space used: 2224591548620
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)