BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.211
(777 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU097673.1|AU097673 AU097673 Rice panicle shorter than 3... 392 e-106
gb|CA998897.1|CA998897 S345N_D05 Rice cold stress germinati... 392 e-106
gb|CF307934.1|CF307934 ABF--01-I21.b1 ABF3-overexpressing t... 392 e-106
gb|CO436072.1|CO436072 OsMR994 5MT resistant rice mutant cD... 392 e-106
gb|AC098832.3| Oryza sativa (japonica cultivar-group) chrom... 392 e-106
gb|AC104284.2| Oryza sativa (japonica cultivar-group) chrom... 392 e-106
gb|AACV01012743.1| Oryza sativa (japonica cultivar-group) c... 392 e-106
ref|XM_475912.1| Oryza sativa (japonica cultivar-group), p... 392 e-106
ref|NT_107222.1| Oryza sativa (japonica cultivar-group) 392 e-106
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 392 e-106
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 392 e-106
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 392 e-106
gb|AU032007.1|AU032007 AU032007 Rice root Oryza sativa (jap... 391 e-106
gb|CF290947.1|CF290947 14ROOT--01-D01.b1 Rice root plasmid ... 387 e-105
gb|CB661775.1|CB661775 OSJNEd05B14.f OSJNEd Oryza sativa (j... 385 e-104
gb|CF334827.1|CF334827 JMT--04-E05.b1 AtJMT-overexpressing ... 385 e-104
gb|CO435616.1|CO435616 OsMR682 5MT resistant rice mutant cD... 385 e-104
gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbar... 385 e-104
gb|AACV01006345.1| Oryza sativa (japonica cultivar-group) c... 385 e-104
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 385 e-104
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 385 e-104
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 385 e-104
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 385 e-104
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 385 e-104
gb|AU070936.1|AU070936 AU070936 Rice cDNA from young root O... 377 e-102
gb|CA998848.1|CA998848 S345M_G12 Rice cold stress germinati... 377 e-102
gb|BP184585.1|BP184585 BP184585 pNS rice panicle cDNA, flow... 377 e-102
gb|BP184926.1|BP184926 BP184926 pNS rice callus cDNA Oryza ... 377 e-102
dbj|AP003045.2| Oryza sativa (japonica cultivar-group) geno... 377 e-102
gb|AACV01000215.1| Oryza sativa (japonica cultivar-group) c... 377 e-102
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 377 e-102
ref|NM_184409.1| Oryza sativa (japonica cultivar-group), mRNA 377 e-102
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 377 e-102
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 377 e-102
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 377 e-102
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 377 e-102
gb|CA755827.1|CA755827 BR030029000_PLATE_B12_90_096.ab1 OA ... 375 e-101
gb|CV730234.1|CV730234 FLO--03-K21.g1 Rice flower lambda ph... 375 e-101
dbj|AP002540.2| Oryza sativa (japonica cultivar-group) geno... 375 e-101
gb|AACV01000194.1| Oryza sativa (japonica cultivar-group) c... 375 e-101
ref|NM_184371.1| Oryza sativa (japonica cultivar-group), mRNA 375 e-101
gb|AU057603.1|AU057603 AU057603 Oryza sativa mature leaf Ni... 373 e-100
gb|CB662156.1|CB662156 OSJNEd05O18.f OSJNEd Oryza sativa (j... 373 e-100
gb|CB662157.1|CB662157 OSJNEd05O18.r OSJNEd Oryza sativa (j... 373 e-100
gb|CF278594.1|CF278594 14ETL--04-I24.b1 Rice etiolated leaf... 373 e-100
gb|CF279531.1|CF279531 14ETL--05-N20.b1 Rice etiolated leaf... 373 e-100
gb|CF291163.1|CF291163 14ROOT--01-H18.b1 Rice root plasmid ... 373 e-100
gb|CF291164.1|CF291164 14ROOT--01-H18.g1 Rice root plasmid ... 373 e-100
gb|CF292148.1|CF292148 14ROOT--02-N19.b1 Rice root plasmid ... 373 e-100
gb|CF292227.1|CF292227 14ROOT--02-P16.b1 Rice root plasmid ... 373 e-100
gb|CF333473.1|CF333473 JMT--02-G04.b1 AtJMT-overexpressing ... 373 e-100
gb|CV731987.1|CV731987 FLO--06-E06.g1 Rice flower lambda ph... 373 e-100
gb|CV732516.1|CV732516 FLO--07-A10.b1 Rice flower lambda ph... 373 e-100
dbj|AP002522.1| Oryza sativa (japonica cultivar-group) geno... 373 e-100
ref|NM_184407.1| Oryza sativa (japonica cultivar-group), mRNA 373 e-100
gb|AU057602.2|AU057602 AU057602 Oryza sativa mature leaf Ni... 371 e-100
gb|AU029435.1|AU029435 AU029435 Rice panicle shorter than 3... 369 2e-099
gb|AU068669.1|AU068669 AU068669 Rice callus Oryza sativa (j... 369 2e-099
gb|AU068670.1|AU068670 AU068670 Rice callus Oryza sativa (j... 369 2e-099
gb|AU076129.1|AU076129 AU076129 Rice panicle shorter than 3... 369 2e-099
gb|AU097671.1|AU097671 AU097671 Rice panicle shorter than 3... 369 2e-099
gb|AU097672.1|AU097672 AU097672 Rice panicle shorter than 3... 369 2e-099
gb|CF290925.1|CF290925 14ROOT--01-C11.g1 Rice root plasmid ... 369 2e-099
gb|CF318598.1|CF318598 HD--08-M15.g1 OsHDAC1-overexpressing... 369 2e-099
gb|CF338483.1|CF338483 RCL1--01-N06.g1 Regenerated callus l... 369 2e-099
gb|CF338741.1|CF338741 RCL1--02-K06.g1 Regenerated callus l... 369 2e-099
gb|CF339512.1|CF339512 RCL1--05-B11.g1 Regenerated callus l... 369 2e-099
gb|CF339642.1|CF339642 RCL1--05-I03.g1 Regenerated callus l... 369 2e-099
gb|CF339736.1|CF339736 RCL1--05-M18.g1 Regenerated callus l... 369 2e-099
gb|CF339787.1|CF339787 RCL1--05-O24.g1 Regenerated callus l... 369 2e-099
gb|CF340036.1|CF340036 RCL1--06-M03.g1 Regenerated callus l... 369 2e-099
gb|CF340228.1|CF340228 RCL1--07-F18.g1 Regenerated callus l... 369 2e-099
gb|CF340525.1|CF340525 RCL1--08-E24.g1 Regenerated callus l... 369 2e-099
gb|CF340729.1|CF340729 RCL1--08-P04.g1 Regenerated callus l... 369 2e-099
gb|CV731425.1|CV731425 FLO--05-H09.b1 Rice flower lambda ph... 369 2e-099
dbj|AP004620.3| Oryza sativa (japonica cultivar-group) geno... 369 2e-099
gb|AACV01018772.1| Oryza sativa (japonica cultivar-group) c... 369 2e-099
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 369 2e-099
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 369 2e-099
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 369 2e-099
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 369 2e-099
gb|AU031069.1|AU031069 AU031069 Rice cDNA from immature lea... 367 6e-099
gb|AU082347.1|AU082347 AU082347 Rice callus Oryza sativa (j... 367 6e-099
gb|AU082408.1|AU082408 AU082408 Rice panicle shorter than 3... 367 6e-099
gb|AU097675.1|AU097675 AU097675 Rice immature leaf includin... 367 6e-099
gb|AU097679.1|AU097679 AU097679 Rice root Oryza sativa (jap... 367 6e-099
gb|CV728820.1|CV728820 FLO--01-F13.b1 Rice flower lambda ph... 367 6e-099
gb|CV730588.1|CV730588 FLO--04-D06.b1 Rice flower lambda ph... 367 6e-099
gb|AACV01000209.1| Oryza sativa (japonica cultivar-group) c... 367 6e-099
ref|NM_184399.1| Oryza sativa (japonica cultivar-group), mRNA 367 6e-099
gb|CF292040.1|CF292040 14ROOT--02-L10.b1 Rice root plasmid ... 365 2e-098
gb|AU031294.1|AU031294 AU031294 Rice cDNA from immature lea... 363 9e-098
gb|AU097683.1|AU097683 AU097683 Rice cDNA from young root O... 363 9e-098
ref|XM_483094.1| Oryza sativa (japonica cultivar-group), mRNA 363 9e-098
gb|AU097681.1|AU097681 AU097681 Rice root Oryza sativa (jap... 361 4e-097
gb|CF291302.1|CF291302 14ROOT--01-K20.b1 Rice root plasmid ... 361 4e-097
gb|CF297134.1|CF297134 30DGS--07-M18.b1 Rice leaf plasmid c... 361 4e-097
gb|CF313968.1|CF313968 HD--02-E24.g1 OsHDAC1-overexpressing... 361 4e-097
gb|AU092503.1|AU092503 AU092503 Rice callus Oryza sativa (j... 359 1e-096
gb|AU097674.1|AU097674 AU097674 Rice immature leaf includin... 359 1e-096
gb|CF296221.1|CF296221 30DGS--06-H23.b1 Rice leaf plasmid c... 359 1e-096
gb|AACV01000214.1| Oryza sativa (japonica cultivar-group) c... 359 1e-096
gb|AU082356.1|AU082356 AU082356 Rice callus Oryza sativa (j... 357 6e-096
gb|AU097668.1|AU097668 AU097668 Rice callus Oryza sativa (j... 357 6e-096
gb|CF292090.1|CF292090 14ROOT--02-M12.g1 Rice root plasmid ... 357 6e-096
gb|CF333577.1|CF333577 JMT--02-I13.b1 AtJMT-overexpressing ... 357 6e-096
gb|CV733415.1|CV733415 FLO--08-F04.g1 Rice flower lambda ph... 357 6e-096
ref|NM_184405.1| Oryza sativa (japonica cultivar-group), mRNA 357 6e-096
gb|AU058394.1|AU058394 AU058394 Oryza sativa Nipponbare imm... 355 2e-095
gb|CF338330.1|CF338330 RCL1--01-F18.g1 Regenerated callus l... 355 2e-095
gb|CF340422.1|CF340422 RCL1--07-P17.g1 Regenerated callus l... 355 2e-095
ref|NM_184403.1| Oryza sativa (japonica cultivar-group), mRNA 355 2e-095
gb|AU076128.1|AU076128 AU076128 Rice panicle shorter than 3... 353 9e-095
gb|CV729266.1|CV729266 FLO--02-A05.b1 Rice flower lambda ph... 353 9e-095
gb|CV731643.1|CV731643 FLO--05-M07.g1 Rice flower lambda ph... 353 9e-095
gb|AU031202.1|AU031202 AU031202 Rice cDNA from immature lea... 351 4e-094
gb|CA756225.1|CA756225 BR030038000_PLATE_A05_33_035.ab1 OA ... 351 4e-094
gb|AU182734.1|AU182734 AU182734 Rice panicle shorter than 3... 349 1e-093
gb|CF281520.1|CF281520 14ETL--08-J17.b1 Rice etiolated leaf... 349 1e-093
gb|CF290908.1|CF290908 14ROOT--01-B24.g1 Rice root plasmid ... 349 1e-093
gb|AU029407.1|AU029407 AU029407 Rice panicle shorter than 3... 347 6e-093
gb|CB670862.1|CB670862 OSJNEe04C16.f OSJNEe Oryza sativa (j... 347 6e-093
gb|AACV01000195.1| Oryza sativa (japonica cultivar-group) c... 347 6e-093
ref|NM_184374.1| Oryza sativa (japonica cultivar-group), mRNA 347 6e-093
gb|AU070851.1|AU070851 AU070851 Rice cDNA from young root O... 345 2e-092
gb|CF292149.1|CF292149 14ROOT--02-N19.g1 Rice root plasmid ... 345 2e-092
gb|AQ362504.2|AQ362504 nbxb0050G11f CUGI Rice BAC Library O... 343 9e-092
gb|AACV01001262.1| Oryza sativa (japonica cultivar-group) c... 343 9e-092
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 343 9e-092
dbj|AP003144.1| Oryza sativa (japonica cultivar-group) geno... 343 9e-092
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 343 9e-092
gb|C73984.2|C73984 C73984 Rice panicle shorter than 3cm Ory... 341 3e-091
gb|CF280347.1|CF280347 14ETL--06-P18.b1 Rice etiolated leaf... 341 3e-091
gb|CF292189.1|CF292189 14ROOT--02-O19.b1 Rice root plasmid ... 341 3e-091
gb|CB670863.1|CB670863 OSJNEe04C16.r OSJNEe Oryza sativa (j... 339 1e-090
gb|CV727137.1|CV727137 14Salt--05-C06.g1 Salt treated rice ... 339 1e-090
gb|CV728225.1|CV728225 14Salt--06-N03.g1 Salt treated rice ... 339 1e-090
gb|CF333474.1|CF333474 JMT--02-G04.g1 AtJMT-overexpressing ... 337 5e-090
gb|CV731556.1|CV731556 FLO--05-K07.b1 Rice flower lambda ph... 337 5e-090
gb|AU030153.2|AU030153 AU030153 Rice cDNA from immature lea... 337 5e-090
gb|C27274.1|C27274 C27274 Rice callus cDNA Oryza sativa (ja... 335 2e-089
gb|CF291303.1|CF291303 14ROOT--01-K20.g1 Rice root plasmid ... 335 2e-089
gb|CF293430.1|CF293430 30DGS--02-J22.b1 Rice leaf plasmid c... 333 8e-089
gb|CV728821.1|CV728821 FLO--01-F13.g1 Rice flower lambda ph... 331 3e-088
gb|CV734350.1|CV734350 FLO--09-K18.b1 Rice flower lambda ph... 329 1e-087
gb|CF292220.1|CF292220 14ROOT--02-P12.g1 Rice root plasmid ... 327 5e-087
gb|CF281758.1|CF281758 14ETL--08-P04.g1 Rice etiolated leaf... 325 2e-086
gb|CV731957.1|CV731957 FLO--06-D15.b1 Rice flower lambda ph... 325 2e-086
gb|CF291327.1|CF291327 14ROOT--01-L08.g1 Rice root plasmid ... 323 8e-086
gb|CV725854.1|CV725854 14Salt--03-C23.g1 Salt treated rice ... 323 8e-086
gb|AU097680.2|AU097680 AU097680 Rice root Oryza sativa (jap... 323 8e-086
gb|CV728178.1|CV728178 14Salt--06-L23.b1 Salt treated rice ... 321 3e-085
gb|C74070.1|C74070 C74070 Rice panicle shorter than 3cm Ory... 319 1e-084
gb|AU183294.1|AU183294 AU183294 Rice cDNA from immature lea... 319 1e-084
gb|CF281757.1|CF281757 14ETL--08-P04.b1 Rice etiolated leaf... 319 1e-084
gb|CF290907.1|CF290907 14ROOT--01-B24.b1 Rice root plasmid ... 319 1e-084
gb|CF292089.1|CF292089 14ROOT--02-M12.b1 Rice root plasmid ... 319 1e-084
gb|CF313653.1|CF313653 HD--01-N17.g1 OsHDAC1-overexpressing... 319 1e-084
gb|CV729192.1|CV729192 FLO--01-O12.g1 Rice flower lambda ph... 319 1e-084
gb|CV729210.1|CV729210 FLO--01-O23.b1 Rice flower lambda ph... 319 1e-084
gb|C97158.1|C97158 C97158 Rice callus Oryza sativa (japonic... 317 5e-084
gb|AU097676.1|AU097676 AU097676 Rice immature leaf includin... 317 5e-084
gb|CV727430.1|CV727430 14Salt--05-J04.g1 Salt treated rice ... 317 5e-084
gb|CV730589.1|CV730589 FLO--04-D06.g1 Rice flower lambda ph... 317 5e-084
gb|AU091836.1|AU091836 AU091836 Rice callus Oryza sativa (j... 311 3e-082
gb|CV724027.1|CV724027 root--05-J06.g1 Rice root lambda pha... 311 3e-082
gb|CV728989.1|CV728989 FLO--01-J16.g1 Rice flower lambda ph... 309 1e-081
gb|CV729191.1|CV729191 FLO--01-O12.b1 Rice flower lambda ph... 309 1e-081
gb|AC117265.2| Oryza sativa (japonica cultivar-group) chrom... 309 1e-081
gb|AACV01012349.1| Oryza sativa (japonica cultivar-group) c... 309 1e-081
ref|XM_475367.1| Oryza sativa (japonica cultivar-group), p... 309 1e-081
ref|NT_107213.1| Oryza sativa (japonica cultivar-group) 309 1e-081
gb|CV725903.1|CV725903 14Salt--03-E01.g1 Salt treated rice ... 307 5e-081
gb|CV727429.1|CV727429 14Salt--05-J04.b1 Salt treated rice ... 307 5e-081
gb|CV733073.1|CV733073 FLO--07-N06.b1 Rice flower lambda ph... 307 5e-081
gb|AU097670.1|AU097670 AU097670 Rice panicle (longer than 1... 305 2e-080
gb|AU174701.1|AU174701 AU174701 Rice cDNA from leaf Oryza s... 305 2e-080
gb|CF291429.1|CF291429 14ROOT--01-N15.b1 Rice root plasmid ... 305 2e-080
gb|CF339471.1|CF339471 RCL1--04-P13.g1 Regenerated callus l... 305 2e-080
gb|CV725853.1|CV725853 14Salt--03-C23.b1 Salt treated rice ... 305 2e-080
gb|CV729577.1|CV729577 FLO--02-J14.g1 Rice flower lambda ph... 305 2e-080
gb|CV732640.1|CV732640 FLO--07-D08.b1 Rice flower lambda ph... 305 2e-080
gb|AACV01002648.1| Oryza sativa (japonica cultivar-group) c... 305 2e-080
ref|NM_190523.1| Oryza sativa (japonica cultivar-group), p... 305 2e-080
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 305 2e-080
dbj|AP003231.3| Oryza sativa (japonica cultivar-group) geno... 305 2e-080
dbj|AP003241.3| Oryza sativa (japonica cultivar-group) geno... 305 2e-080
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 305 2e-080
gb|AU097677.1|AU097677 AU097677 Rice cDNA from immature lea... 303 7e-080
gb|CF338869.1|CF338869 RCL1--03-A13.g1 Regenerated callus l... 303 7e-080
gb|CF340382.1|CF340382 RCL1--07-N17.g1 Regenerated callus l... 303 7e-080
gb|CF340744.1|CF340744 RCL1--08-P20.g1 Regenerated callus l... 303 7e-080
gb|CV725979.1|CV725979 14Salt--03-G01.b1 Salt treated rice ... 303 7e-080
gb|CV731986.1|CV731986 FLO--06-E06.b1 Rice flower lambda ph... 301 3e-079
gb|AU065894.1|AU065894 AU065894 Rice green shoot Oryza sati... 299 1e-078
gb|CV733163.1|CV733163 FLO--07-P07.b1 Rice flower lambda ph... 299 1e-078
gb|CV734119.1|CV734119 FLO--09-F11.b1 Rice flower lambda ph... 299 1e-078
gb|AU064314.2|AU064314 AU064314 Rice panicle (longer than 1... 297 5e-078
gb|CF292219.1|CF292219 14ROOT--02-P12.b1 Rice root plasmid ... 295 2e-077
gb|CV725902.1|CV725902 14Salt--03-E01.b1 Salt treated rice ... 295 2e-077
gb|CF290948.1|CF290948 14ROOT--01-D01.g1 Rice root plasmid ... 293 7e-077
gb|CV727985.1|CV727985 14Salt--06-G22.b1 Salt treated rice ... 293 7e-077
gb|AZ130708.1|AZ130708 OSJNBb0062D13f CUGI Rice BAC Library... 291 3e-076
gb|CA999413.1|CA999413 S234H_C02 Rice cold stress germinati... 291 3e-076
gb|CV727136.1|CV727136 14Salt--05-C06.b1 Salt treated rice ... 291 3e-076
gb|CV732517.1|CV732517 FLO--07-A10.g1 Rice flower lambda ph... 291 3e-076
gb|AU063158.1|AU063158 AU063158 Rice callus Oryza sativa (j... 289 1e-075
gb|CF325670.1|CF325670 JMT1--03-N20.g1 AtJMT-overexpressing... 289 1e-075
gb|AU031162.1|AU031162 AU031162 Rice cDNA from immature lea... 287 4e-075
gb|AU172806.1|AU172806 AU172806 Rice panicle shorter than 3... 287 4e-075
gb|CF292041.1|CF292041 14ROOT--02-L10.g1 Rice root plasmid ... 287 4e-075
gb|CV723677.1|CV723677 root--04-G10.g1 Rice root lambda pha... 287 4e-075
gb|CV726600.1|CV726600 14Salt--04-F09.g1 Salt treated rice ... 287 4e-075
gb|CV729459.1|CV729459 FLO--02-F22.b1 Rice flower lambda ph... 287 4e-075
gb|CV731426.1|CV731426 FLO--05-H09.g1 Rice flower lambda ph... 285 2e-074
gb|CV733685.1|CV733685 FLO--08-L10.g1 Rice flower lambda ph... 285 2e-074
gb|CV734351.1|CV734351 FLO--09-K18.g1 Rice flower lambda ph... 285 2e-074
gb|CV728663.1|CV728663 FLO--01-B21.g1 Rice flower lambda ph... 283 7e-074
gb|CV731958.1|CV731958 FLO--06-D15.g1 Rice flower lambda ph... 283 7e-074
gb|CF293431.1|CF293431 30DGS--02-J22.g1 Rice leaf plasmid c... 281 3e-073
gb|CV729576.1|CV729576 FLO--02-J14.b1 Rice flower lambda ph... 281 3e-073
gb|CV725419.1|CV725419 14Salt--02-H24.g1 Salt treated rice ... 280 1e-072
gb|CV731557.1|CV731557 FLO--05-K07.g1 Rice flower lambda ph... 280 1e-072
gb|CV734120.1|CV734120 FLO--09-F11.g1 Rice flower lambda ph... 280 1e-072
gb|CV729931.1|CV729931 FLO--03-D14.g1 Rice flower lambda ph... 278 4e-072
gb|CV734434.1|CV734434 FLO--09-M20.g1 Rice flower lambda ph... 278 4e-072
gb|D22681.1|D22681 RICC0893A Rice callus Oryza sativa (japo... 274 7e-071
gb|AU182176.1|AU182176 AU182176 Rice callus (2001) Oryza sa... 274 7e-071
gb|CF281521.1|CF281521 14ETL--08-J17.g1 Rice etiolated leaf... 274 7e-071
gb|CF292228.1|CF292228 14ROOT--02-P16.g1 Rice root plasmid ... 274 7e-071
gb|AU062984.1|AU062984 AU062984 Rice callus Oryza sativa (j... 272 3e-070
gb|CV731642.1|CV731642 FLO--05-M07.b1 Rice flower lambda ph... 272 3e-070
gb|CV732641.1|CV732641 FLO--07-D08.g1 Rice flower lambda ph... 272 3e-070
gb|CF290924.1|CF290924 14ROOT--01-C11.b1 Rice root plasmid ... 268 4e-069
gb|AU095013.1|AU095013 AU095013 Rice immature leaf includin... 266 2e-068
gb|CV733074.1|CV733074 FLO--07-N06.g1 Rice flower lambda ph... 266 2e-068
gb|CV733684.1|CV733684 FLO--08-L10.b1 Rice flower lambda ph... 266 2e-068
gb|CV729874.1|CV729874 FLO--03-C07.b1 Rice flower lambda ph... 262 3e-067
gb|AU057673.1|AU057673 AU057673 Oryza sativa mature leaf Ni... 260 1e-066
gb|AU075448.1|AU075448 AU075448 Rice cDNA from immature lea... 258 4e-066
gb|CF312627.1|CF312627 ABF--08-H11.g1 ABF3-overexpressing t... 256 2e-065
gb|CV721027.1|CV721027 YBH--02-K11.b1 Rice before heading y... 254 6e-065
gb|CV721456.1|CV721456 YBH--04-D02.b1 Rice before heading y... 246 2e-062
gb|C74089.1|C74089 C74089 Rice panicle shorter than 3cm Ory... 244 6e-062
gb|AU225174.1|AU225174 AU225174 Oryza sativa Koshihikari pi... 242 2e-061
gb|AQ157995.1|AQ157995 nbxb0010O24f CUGI Rice BAC Library O... 240 9e-061
gb|CV721437.1|CV721437 YBH--04-C03.b1 Rice before heading y... 240 9e-061
gb|CV720821.1|CV720821 YBH--01-P10.b1 Rice before heading y... 232 2e-058
gb|C98207.1|C98207 C98207 Rice callus Oryza sativa (japonic... 224 6e-056
gb|CV733085.1|CV733085 FLO--07-N13.g1 Rice flower lambda ph... 224 6e-056
gb|CV720894.1|CV720894 YBH--02-D09.b1 Rice before heading y... 218 3e-054
gb|CV729413.1|CV729413 FLO--02-E17.b1 Rice flower lambda ph... 218 3e-054
gb|CF280348.1|CF280348 14ETL--06-P18.g1 Rice etiolated leaf... 210 8e-052
gb|CV733414.1|CV733414 FLO--08-F04.b1 Rice flower lambda ph... 210 8e-052
gb|AU092764.1|AU092764 AU092764 Rice callus Oryza sativa (j... 208 3e-051
gb|CF277856.1|CF277856 14ETL--03-I19.b1 Rice etiolated leaf... 208 3e-051
gb|CV729896.1|CV729896 FLO--03-C19.b1 Rice flower lambda ph... 208 3e-051
gb|CV728988.1|CV728988 FLO--01-J16.b1 Rice flower lambda ph... 202 2e-049
gb|AU082915.1|AU082915 AU082915 Rice callus Oryza sativa (j... 196 1e-047
gb|AU097669.1|AU097669 AU097669 Rice callus Oryza sativa (j... 194 5e-047
dbj|AK059159.1| Oryza sativa (japonica cultivar-group) cDNA... 190 8e-046
gb|CV731377.1|CV731377 FLO--05-G05.g1 Rice flower lambda ph... 186 1e-044
gb|C97210.1|C97210 C97210 Rice callus Oryza sativa (japonic... 182 2e-043
gb|AU095590.1|AU095590 AU095590 Rice cDNA from young root O... 182 2e-043
gb|C97239.1|C97239 C97239 Rice callus Oryza sativa (japonic... 180 7e-043
gb|AU184845.1|AU184845 AU184845 Rice cDNA from young root O... 176 1e-041
gb|AQ868678.1|AQ868678 nbeb0030B11r CUGI Rice BAC Library (... 174 5e-041
gb|CV725777.1|CV725777 14Salt--03-B01.g1 Salt treated rice ... 174 5e-041
gb|D48146.2|D48146 RICS14215A Rice green shoot Oryza sativa... 174 5e-041
gb|CF334828.1|CF334828 JMT--04-E05.g1 AtJMT-overexpressing ... 172 2e-040
gb|C97157.1|C97157 C97157 Rice callus Oryza sativa (japonic... 167 1e-038
gb|CF315774.1|CF315774 HD--04-N03.b1 OsHDAC1-overexpressing... 167 1e-038
gb|AU062949.2|AU062949 AU062949 Rice callus Oryza sativa (j... 161 7e-037
gb|CF278595.1|CF278595 14ETL--04-I24.g1 Rice etiolated leaf... 159 3e-036
gb|D49215.1|D49215 RICS16333A Rice green shoot Oryza sativa... 157 1e-035
gb|D25082.1|D25082 RICR3125A Rice root Oryza sativa (japoni... 157 1e-035
gb|D22526.1|D22526 RICC0138B Rice callus Oryza sativa (japo... 153 2e-034
gb|C73966.1|C73966 C73966 Rice panicle shorter than 3cm Ory... 149 3e-033
gb|AU070557.1|AU070557 AU070557 Rice shoot Oryza sativa (ja... 149 3e-033
gb|D23591.1|D23591 RICC3057A Rice callus Oryza sativa (japo... 147 1e-032
gb|CF277857.1|CF277857 14ETL--03-I19.g1 Rice etiolated leaf... 147 1e-032
gb|CF339158.1|CF339158 RCL1--03-P11.g1 Regenerated callus l... 145 4e-032
gb|D40363.1|D40363 RICS2285A Rice shoot Oryza sativa (japon... 143 2e-031
gb|CV728224.1|CV728224 14Salt--06-N03.b1 Salt treated rice ... 141 6e-031
gb|C27926.1|C27926 C27926 Rice callus cDNA Oryza sativa (ja... 137 1e-029
gb|AU097667.1|AU097667 AU097667 Rice callus Oryza sativa (j... 137 1e-029
gb|CV729460.1|CV729460 FLO--02-F22.g1 Rice flower lambda ph... 135 4e-029
gb|CV725556.1|CV725556 14Salt--02-L07.b1 Salt treated rice ... 129 2e-027
gb|AU064441.1|AU064441 AU064441 Rice panicle shorter than 3... 121 6e-025
gb|AU096554.1|AU096554 AU096554 Rice green shoot Oryza sati... 119 2e-024
gb|AU058305.1|AU058305 AU058305 Oryza sativa Nipponbare imm... 117 9e-024
gb|C27000.1|C27000 C27000 Rice callus cDNA Oryza sativa (ja... 113 1e-022
gb|C74202.1|C74202 C74202 Rice panicle shorter than 3cm Ory... 113 1e-022
gb|D15624.1|D15624 RICC0972A Rice callus Oryza sativa (japo... 113 1e-022
gb|AU058172.1|AU058172 AU058172 Oryza sativa Nipponbare imm... 113 1e-022
gb|C74297.1|C74297 C74297 Rice panicle shorter than 3cm Ory... 109 2e-021
gb|AU174702.1|AU174702 AU174702 Rice cDNA from leaf Oryza s... 105 4e-020
gb|CV731376.1|CV731376 FLO--05-G05.b1 Rice flower lambda ph... 105 4e-020
dbj|AP003918.3| Oryza sativa (japonica cultivar-group) geno... 105 4e-020
gb|AACV01017940.1| Oryza sativa (japonica cultivar-group) c... 105 4e-020
dbj|AP005390.2| Oryza sativa (japonica cultivar-group) geno... 105 4e-020
gb|C27445.1|C27445 C27445 Rice callus cDNA Oryza sativa (ja... 101 6e-019
gb|C74145.1|C74145 C74145 Rice panicle shorter than 3cm Ory... 101 6e-019
dbj|AP004558.3| Oryza sativa (japonica cultivar-group) geno... 101 6e-019
dbj|AP004665.4| Oryza sativa (japonica cultivar-group) geno... 101 6e-019
gb|AACV01018587.1| Oryza sativa (japonica cultivar-group) c... 101 6e-019
gb|AU062423.1|AU062423 AU062423 Rice callus Oryza sativa (j... 100 2e-018
gb|D24618.1|D24618 RICR2259A Rice root Oryza sativa (japoni... 98 9e-018
gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbar... 98 9e-018
gb|AACV01006503.1| Oryza sativa (japonica cultivar-group) c... 98 9e-018
gb|CV727986.1|CV727986 14Salt--06-G22.g1 Salt treated rice ... 96 3e-017
gb|AQ161058.1|AQ161058 nbxb0006M04f CUGI Rice BAC Library O... 94 1e-016
gb|D23046.1|D23046 RICC2090A Rice callus Oryza sativa (japo... 94 1e-016
gb|CV729930.1|CV729930 FLO--03-D14.b1 Rice flower lambda ph... 94 1e-016
gb|D47132.1|D47132 RICS12273A Rice green shoot Oryza sativa... 92 5e-016
gb|AU097666.1|AU097666 AU097666 Rice callus Oryza sativa (j... 92 5e-016
dbj|AK108119.1| Oryza sativa (japonica cultivar-group) cDNA... 92 5e-016
gb|AU058177.1|AU058177 AU058177 Oryza sativa Nipponbare imm... 90 2e-015
gb|AU063733.1|AU063733 AU063733 Rice callus Oryza sativa (j... 90 2e-015
gb|CV730130.1|CV730130 FLO--03-I07.b1 Rice flower lambda ph... 90 2e-015
gb|D22527.1|D22527 RICC0138A Rice callus Oryza sativa (japo... 88 8e-015
gb|D23918.1|D23918 RICR0573A Rice root Oryza sativa (japoni... 88 8e-015
gb|CV733627.1|CV733627 FLO--08-K01.g1 Rice flower lambda ph... 88 8e-015
gb|AU029901.1|AU029901 AU029901 Rice cDNA from immature lea... 86 3e-014
ref|XM_482672.1| Oryza sativa (japonica cultivar-group), mRNA 86 3e-014
gb|AU030152.1|AU030152 AU030152 Rice cDNA from immature lea... 84 1e-013
gb|CF315294.1|CF315294 HD--04-C15.b1 OsHDAC1-overexpressing... 84 1e-013
dbj|AK106505.1| Oryza sativa (japonica cultivar-group) cDNA... 84 1e-013
ref|NT_107078.1| Oryza sativa (japonica cultivar-group) 84 1e-013
dbj|AP006162.2| Oryza sativa (japonica cultivar-group) geno... 84 1e-013
gb|AACV01020566.1| Oryza sativa (japonica cultivar-group) c... 84 1e-013
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 84 1e-013
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 84 1e-013
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 84 1e-013
gb|AU064386.1|AU064386 AU064386 Rice panicle shorter than 3... 80 2e-012
gb|CV729554.1|CV729554 FLO--02-I20.b1 Rice flower lambda ph... 78 8e-012
gb|CF315295.1|CF315295 HD--04-C15.g1 OsHDAC1-overexpressing... 76 3e-011
gb|D39530.1|D39530 RICS0937A Rice shoot Oryza sativa (japon... 74 1e-010
gb|C97215.2|C97215 C97215 Rice callus Oryza sativa (japonic... 74 1e-010
dbj|AP005069.2| Oryza sativa (japonica cultivar-group) geno... 72 5e-010
gb|AACV01020855.1| Oryza sativa (japonica cultivar-group) c... 72 5e-010
ref|NT_107179.1| Oryza sativa (japonica cultivar-group) 72 5e-010
gb|CH401245.1| Oryza sativa (japonica cultivar-group) chrom... 72 5e-010
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 72 5e-010
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 72 5e-010
ref|NT_107237.1| Oryza sativa (japonica cultivar-group) 70 2e-009
dbj|AP006164.2| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
dbj|AP006166.3| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
gb|AACV01013677.1| Oryza sativa (japonica cultivar-group) c... 70 2e-009
gb|CH401210.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 70 2e-009
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 70 2e-009
emb|AL731874.4|CNS08C8E Oryza sativa chromosome 12, . BAC O... 68 8e-009
ref|NT_079833.2| Oryza sativa (japonica cultivar-group) 68 8e-009
gb|AACV01011256.1| Oryza sativa (japonica cultivar-group) c... 68 8e-009
gb|CH401192.1| Oryza sativa (japonica cultivar-group) chrom... 68 8e-009
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 68 8e-009
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 68 8e-009
gb|AU062951.1|AU062951 AU062951 Rice callus Oryza sativa (j... 66 3e-008
gb|CF313652.1|CF313652 HD--01-N17.b1 OsHDAC1-overexpressing... 66 3e-008
gb|AACV01002319.1| Oryza sativa (japonica cultivar-group) c... 66 3e-008
dbj|AP002972.3| Oryza sativa (japonica cultivar-group) geno... 66 3e-008
dbj|AP005286.3| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
gb|AC135914.2| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
gb|AC136226.2| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
gb|AACV01004890.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
gb|AACV01011154.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
ref|NT_107225.1| Oryza sativa (japonica cultivar-group) 60 2e-006
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 60 2e-006
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
gb|AU093193.1|AU093193 AU093193 Rice callus Oryza sativa (j... 58 7e-006
gb|AACV01005126.1| Oryza sativa (japonica cultivar-group) c... 58 7e-006
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 58 7e-006
dbj|AP004160.2| Oryza sativa (japonica cultivar-group) geno... 58 7e-006
dbj|AP005885.3| Oryza sativa (japonica cultivar-group) geno... 58 7e-006
gb|D23468.1|D23468 RICC2857A Rice callus Oryza sativa (japo... 56 3e-005
gb|CF279284.1|CF279284 14ETL--05-I13.b1 Rice etiolated leaf... 56 3e-005
gb|CF338670.1|CF338670 RCL1--02-G18.g1 Regenerated callus l... 56 3e-005
gb|AC139174.3| Oryza sativa chromosome 3 BAC OSJNBb0065L20 ... 56 3e-005
gb|AACV01007551.1| Oryza sativa (japonica cultivar-group) c... 56 3e-005
ref|NT_107185.1| Oryza sativa (japonica cultivar-group) 56 3e-005
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 56 3e-005
gb|AC134256.4| Oryza sativa (japonica cultivar-group), comp... 54 1e-004
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 54 1e-004
ref|NT_107091.1| Oryza sativa (japonica cultivar-group), co... 54 1e-004
dbj|AP003622.3| Oryza sativa (japonica cultivar-group) geno... 54 1e-004
gb|AACV01014439.1| Oryza sativa (japonica cultivar-group) c... 54 1e-004
gb|AACV01023287.1| Oryza sativa (japonica cultivar-group) c... 54 1e-004
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 54 1e-004
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
gb|AC129224.2| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|AC120888.2| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
dbj|AP005532.3| Oryza sativa (japonica cultivar-group) geno... 52 5e-004
gb|AC134341.2| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
ref|NT_107135.1| Oryza sativa (japonica cultivar-group) 52 5e-004
gb|AACV01003979.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
gb|AACV01010945.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
gb|AACV01023698.1| Oryza sativa (japonica cultivar-group) c... 52 5e-004
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 52 5e-004
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 52 5e-004
gb|CH401266.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 52 5e-004
gb|AQ870965.1|AQ870965 nbeb0041J05r CUGI Rice BAC Library (... 50 0.002
gb|CA755693.1|CA755693 BR030026001_BR030_B03_18_025.ab1 OA ... 50 0.002
gb|CF296222.1|CF296222 30DGS--06-H23.g1 Rice leaf plasmid c... 50 0.002
dbj|AP004661.3| Oryza sativa (japonica cultivar-group) geno... 50 0.002
dbj|AP004554.3| Oryza sativa (japonica cultivar-group) geno... 50 0.002
dbj|AP004801.3| Oryza sativa (japonica cultivar-group) geno... 50 0.002
gb|AACV01002285.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01003786.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01012890.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01018073.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01019447.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01021331.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
dbj|AP002837.2| Oryza sativa (japonica cultivar-group) geno... 50 0.002
ref|NT_080065.1| Oryza sativa (japonica cultivar-group) chr... 50 0.002
ref|NT_107079.1| Oryza sativa (japonica cultivar-group) 50 0.002
dbj|AP001389.1| Oryza sativa (japonica cultivar-group) geno... 50 0.002
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 50 0.002
dbj|AP005839.3| Oryza sativa (japonica cultivar-group) geno... 50 0.002
dbj|AP003142.2| Oryza sativa (japonica cultivar-group) geno... 50 0.002
gb|CH401253.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|CH401241.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 50 0.002
gb|AC083945.3| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|AU093220.1|AU093220 AU093220 Rice callus Oryza sativa (j... 48 0.007
dbj|AP004631.1| Oryza sativa (japonica cultivar-group) chro... 48 0.007
dbj|AP004465.3| Oryza sativa (japonica cultivar-group) geno... 48 0.007
gb|AC137921.2| Oryza sativa chromosome 3 BAC OSJNBa0027H16 ... 48 0.007
emb|AL731583.2|OSJN00231 Oryza sativa genomic DNA, chromoso... 48 0.007
dbj|AP003811.2| Oryza sativa (japonica cultivar-group) geno... 48 0.007
gb|AACV01007221.1| Oryza sativa (japonica cultivar-group) c... 48 0.007
gb|AACV01009048.1| Oryza sativa (japonica cultivar-group) c... 48 0.007
gb|AACV01016454.1| Oryza sativa (japonica cultivar-group) c... 48 0.007
gb|AACV01017932.1| Oryza sativa (japonica cultivar-group) c... 48 0.007
gb|AACV01018311.1| Oryza sativa (japonica cultivar-group) c... 48 0.007
gb|AACV01020975.1| Oryza sativa (japonica cultivar-group) c... 48 0.007
ref|NT_080061.1| Oryza sativa (japonica cultivar-group) chr... 48 0.007
ref|XM_463083.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.007
ref|NT_079855.2| Oryza sativa (japonica cultivar-group) 48 0.007
ref|NT_107174.1| Oryza sativa (japonica cultivar-group) 48 0.007
dbj|AP006753.2| Oryza sativa (japonica cultivar-group) geno... 48 0.007
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 48 0.007
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.007
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.007
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.007
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.007
emb|AL731604.3|OSJN00247 Oryza sativa genomic DNA, chromoso... 48 0.007
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 48 0.007
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 48 0.007
gb|CB645852.1|CB645852 OSJNEb07O05.f OSJNEb Oryza sativa (j... 46 0.028
gb|CF279532.1|CF279532 14ETL--05-N20.g1 Rice etiolated leaf... 46 0.028
gb|CV722702.1|CV722702 root--01-F02.g1 Rice root lambda pha... 46 0.028
gb|AC108883.1| Genomic sequence for (japonica cultivar-grou... 46 0.028
gb|AC145127.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.028
gb|AC130603.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.028
gb|AACV01012563.1| Oryza sativa (japonica cultivar-group) c... 46 0.028
gb|AACV01025707.1| Oryza sativa (japonica cultivar-group) C... 46 0.028
ref|NT_080060.1| Oryza sativa (japonica cultivar-group) chr... 46 0.028
ref|NT_107217.1| Oryza sativa (japonica cultivar-group) 46 0.028
gb|CH401300.1| Oryza sativa (japonica cultivar-group) scaff... 46 0.028
gb|AC166065.1| Oryza sativa (japonica cultivar-group) chrom... 46 0.028
gb|AC079632.4| Oryza sativa (japonica cultivar-group) chrom... 46 0.028
gb|C20006.1|C20006 C20006 Rice panicle at ripening stage Or... 44 0.11
gb|C20148.1|C20148 C20148 Rice panicle at ripening stage Or... 44 0.11
gb|C20231.1|C20231 C20231 Rice panicle at ripening stage Or... 44 0.11
gb|C20247.1|C20247 C20247 Rice panicle at ripening stage Or... 44 0.11
gb|C20253.1|C20253 C20253 Rice panicle at ripening stage Or... 44 0.11
gb|C24997.1|C24997 C24997 Rice green shoot Oryza sativa (ja... 44 0.11
gb|C74210.1|C74210 C74210 Rice panicle shorter than 3cm Ory... 44 0.11
gb|C93565.1|C93565 C93565 Rice callus Oryza sativa (japonic... 44 0.11
gb|D22733.1|D22733 RICC1108A Rice callus Oryza sativa (japo... 44 0.11
gb|D22836.1|D22836 RICC1553A Rice callus Oryza sativa (japo... 44 0.11
gb|D22918.1|D22918 RICC1779A Rice callus Oryza sativa (japo... 44 0.11
gb|D23481.1|D23481 RICC2879A Rice callus Oryza sativa (japo... 44 0.11
gb|D23543.1|D23543 RICC2981A Rice callus Oryza sativa (japo... 44 0.11
gb|C98178.1|C98178 C98178 Rice callus Oryza sativa (japonic... 44 0.11
gb|C98179.1|C98179 C98179 Rice callus Oryza sativa (japonic... 44 0.11
gb|C99002.1|C99002 C99002 Rice panicle at flowering stage O... 44 0.11
gb|AU030114.1|AU030114 AU030114 Rice cDNA from immature lea... 44 0.11
gb|AU056447.1|AU056447 AU056447 Oryza sativa mature leaf Ni... 44 0.11
gb|AU056985.1|AU056985 AU056985 Oryza sativa mature leaf Ni... 44 0.11
gb|AU057347.1|AU057347 AU057347 Oryza sativa mature leaf Ni... 44 0.11
gb|AU057348.1|AU057348 AU057348 Oryza sativa mature leaf Ni... 44 0.11
gb|AU057690.1|AU057690 AU057690 Oryza sativa mature leaf Ni... 44 0.11
gb|AU062841.1|AU062841 AU062841 Rice callus Oryza sativa (j... 44 0.11
gb|AU063186.1|AU063186 AU063186 Rice callus Oryza sativa (j... 44 0.11
gb|AU063245.1|AU063245 AU063245 Rice callus Oryza sativa (j... 44 0.11
gb|AU063576.1|AU063576 AU063576 Rice callus Oryza sativa (j... 44 0.11
gb|AU064225.1|AU064225 AU064225 Rice panicle (longer than 1... 44 0.11
gb|AU064669.1|AU064669 AU064669 Rice panicle (between 3cm t... 44 0.11
gb|AU064756.1|AU064756 AU064756 Rice panicle (between 3cm t... 44 0.11
gb|AU064762.1|AU064762 AU064762 Rice panicle (between 3cm t... 44 0.11
>gb|AU097673.1|AU097673 AU097673 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30833, mRNA sequence
Length = 697
Score = 392 bits (198), Expect = e-106
Identities = 249/266 (93%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 417
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 416 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 357
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 356 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 297
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| || ||||||
Sbjct: 296 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 237
Query: 487 aagatgtagatcttgtacgtctccac 512
||||||||||||||||| ||||||||
Sbjct: 236 aagatgtagatcttgtaggtctccac 211
Score = 89.7 bits (45), Expect = 2e-015
Identities = 105/120 (87%), Gaps = 8/120 (6%)
Strand = Plus / Minus
Query: 571 cccgcggggagccgcttctcagccttgggcttcttcccc---gccgtggccttctccgcc 627
|||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||
Sbjct: 147 cccgcggggagccgcttctccgccttgggcttcttccccgccgccggggccttctccgcc 88
Query: 628 gccggctcctcc-tcggcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
| ||||||||| |||| |||||||| || || ||||||||||| | ||||||||||||
Sbjct: 87 g-nggctcctccttcgg--ggcttcttcgccgc-ggcttcttctccgncttgggcgccat 32
>gb|CA998897.1|CA998897 S345N_D05 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 460
Score = 392 bits (198), Expect = e-106
Identities = 249/266 (93%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 215
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 214 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 155
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 154 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 95
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| || ||||||
Sbjct: 94 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 35
Query: 487 aagatgtagatcttgtacgtctccac 512
||||||||||||||||| ||||||||
Sbjct: 34 aagatgtagatcttgtaggtctccac 9
>gb|CF307934.1|CF307934 ABF--01-I21.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--01-I21, mRNA sequence
Length = 504
Score = 392 bits (198), Expect = e-106
Identities = 249/266 (93%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 256
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 255 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 196
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 195 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 136
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| || ||||||
Sbjct: 135 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 76
Query: 487 aagatgtagatcttgtacgtctccac 512
||||||||||||||||| ||||||||
Sbjct: 75 aagatgtagatcttgtaggtctccac 50
>gb|CO436072.1|CO436072 OsMR994 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 885
Score = 392 bits (198), Expect = e-106
Identities = 249/266 (93%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 501
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 500 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 441
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 440 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 381
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| || ||||||
Sbjct: 380 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 321
Query: 487 aagatgtagatcttgtacgtctccac 512
||||||||||||||||| ||||||||
Sbjct: 320 aagatgtagatcttgtaggtctccac 295
Score = 137 bits (69), Expect = 1e-029
Identities = 107/119 (89%), Gaps = 3/119 (2%)
Strand = Plus / Minus
Query: 571 cccgcggggagccgcttctcagccttgggcttcttccccgccgt---ggccttctccgcc 627
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 230 cccgcggggagccgcttctccgccttgggcttcttccccgccgccggggccttctccgcc 171
Query: 628 gccggctcctcctcggcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
|| ||||||||||| || |||||||| || || ||||||||||| ||||||||||||||
Sbjct: 170 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 112
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08,
complete sequence
Length = 119500
Score = 392 bits (198), Expect = e-106
Identities = 249/266 (93%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27079 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 27020
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 27019 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 26960
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 26959 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 26900
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| || ||||||
Sbjct: 26899 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 26840
Query: 487 aagatgtagatcttgtacgtctccac 512
||||||||||||||||| ||||||||
Sbjct: 26839 aagatgtagatcttgtaggtctccac 26814
Score = 137 bits (69), Expect = 1e-029
Identities = 107/119 (89%), Gaps = 3/119 (2%)
Strand = Plus / Minus
Query: 571 cccgcggggagccgcttctcagccttgggcttcttccccgccgt---ggccttctccgcc 627
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 26749 cccgcggggagccgcttctccgccttgggcttcttccccgccgccggggccttctccgcc 26690
Query: 628 gccggctcctcctcggcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
|| ||||||||||| || |||||||| || || ||||||||||| ||||||||||||||
Sbjct: 26689 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 26631
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10,
complete sequence
Length = 187034
Score = 392 bits (198), Expect = e-106
Identities = 249/266 (93%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176397 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 176338
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 176337 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 176278
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 176277 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 176218
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| || ||||||
Sbjct: 176217 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 176158
Query: 487 aagatgtagatcttgtacgtctccac 512
||||||||||||||||| ||||||||
Sbjct: 176157 aagatgtagatcttgtaggtctccac 176132
Score = 137 bits (69), Expect = 1e-029
Identities = 107/119 (89%), Gaps = 3/119 (2%)
Strand = Plus / Minus
Query: 571 cccgcggggagccgcttctcagccttgggcttcttccccgccgt---ggccttctccgcc 627
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 176067 cccgcggggagccgcttctccgccttgggcttcttccccgccgccggggccttctccgcc 176008
Query: 628 gccggctcctcctcggcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
|| ||||||||||| || |||||||| || || ||||||||||| ||||||||||||||
Sbjct: 176007 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 175949
>gb|AACV01012743.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012743, whole
genome shotgun sequence
Length = 27501
Score = 392 bits (198), Expect = e-106
Identities = 249/266 (93%)
Strand = Plus / Plus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19997 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 20056
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 20057 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 20116
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 20117 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 20176
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| || ||||||
Sbjct: 20177 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 20236
Query: 487 aagatgtagatcttgtacgtctccac 512
||||||||||||||||| ||||||||
Sbjct: 20237 aagatgtagatcttgtaggtctccac 20262
Score = 137 bits (69), Expect = 1e-029
Identities = 107/119 (89%), Gaps = 3/119 (2%)
Strand = Plus / Plus
Query: 571 cccgcggggagccgcttctcagccttgggcttcttccccgccgt---ggccttctccgcc 627
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 20327 cccgcggggagccgcttctccgccttgggcttcttccccgccgccggggccttctccgcc 20386
Query: 628 gccggctcctcctcggcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
|| ||||||||||| || |||||||| || || ||||||||||| ||||||||||||||
Sbjct: 20387 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 20445
>ref|XM_475912.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 459
Score = 392 bits (198), Expect = e-106
Identities = 249/266 (93%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 390
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 389 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 330
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 329 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 270
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| || ||||||
Sbjct: 269 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 210
Query: 487 aagatgtagatcttgtacgtctccac 512
||||||||||||||||| ||||||||
Sbjct: 209 aagatgtagatcttgtaggtctccac 184
Score = 137 bits (69), Expect = 1e-029
Identities = 107/119 (89%), Gaps = 3/119 (2%)
Strand = Plus / Minus
Query: 571 cccgcggggagccgcttctcagccttgggcttcttccccgccgt---ggccttctccgcc 627
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 119 cccgcggggagccgcttctccgccttgggcttcttccccgccgccggggccttctccgcc 60
Query: 628 gccggctcctcctcggcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
|| ||||||||||| || |||||||| || || ||||||||||| ||||||||||||||
Sbjct: 59 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 1
>ref|NT_107222.1| Oryza sativa (japonica cultivar-group)
Length = 1298239
Score = 392 bits (198), Expect = e-106
Identities = 249/266 (93%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27079 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 27020
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 27019 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 26960
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 26959 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 26900
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| || ||||||
Sbjct: 26899 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 26840
Query: 487 aagatgtagatcttgtacgtctccac 512
||||||||||||||||| ||||||||
Sbjct: 26839 aagatgtagatcttgtaggtctccac 26814
Score = 137 bits (69), Expect = 1e-029
Identities = 107/119 (89%), Gaps = 3/119 (2%)
Strand = Plus / Minus
Query: 571 cccgcggggagccgcttctcagccttgggcttcttccccgccgt---ggccttctccgcc 627
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 26749 cccgcggggagccgcttctccgccttgggcttcttccccgccgccggggccttctccgcc 26690
Query: 628 gccggctcctcctcggcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
|| ||||||||||| || |||||||| || || ||||||||||| ||||||||||||||
Sbjct: 26689 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 26631
Score = 44.1 bits (22), Expect = 0.11
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 394 agcttctcgaagatgtcgttgatgaa 419
||||||||| ||||||||||||||||
Sbjct: 991860 agcttctcggagatgtcgttgatgaa 991885
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 392 bits (198), Expect = e-106
Identities = 249/266 (93%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10827228 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 10827169
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 10827168 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 10827109
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 10827108 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 10827049
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| || ||||||
Sbjct: 10827048 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 10826989
Query: 487 aagatgtagatcttgtacgtctccac 512
||||||||||||||||| ||||||||
Sbjct: 10826988 aagatgtagatcttgtaggtctccac 10826963
Score = 309 bits (156), Expect = 1e-081
Identities = 261/296 (88%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4861003 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 4860944
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
|||||||| || || |||||||||||||||||||| ||||| || |||||||||||||||
Sbjct: 4860943 aggacgagacgaacagaggtctggatctcgcgggaggtgattgtgggcttcttgttgtac 4860884
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
| || ||| | || |||||| | | ||||||||||| |||||||||| |||||| |||
Sbjct: 4860883 ctggcaagcctcgcggcctcctgctcgagcttctcgaaaatgtcgttgacgaaggaattc 4860824
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 4860823 atgatggacatggccttggaggagattcctatgtctggatgcacctgcttgagcaccttg 4860764
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttctt 542
||||||||||| || || |||||||| ||||| ||||||||||||||||||||
Sbjct: 4860763 aagatgtagattttataggtctccacgcttttcttcgccttcttcttccccttctt 4860708
Score = 137 bits (69), Expect = 1e-029
Identities = 107/119 (89%), Gaps = 3/119 (2%)
Strand = Plus / Minus
Query: 571 cccgcggggagccgcttctcagccttgggcttcttccccgccgt---ggccttctccgcc 627
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 10826898 cccgcggggagccgcttctccgccttgggcttcttccccgccgccggggccttctccgcc 10826839
Query: 628 gccggctcctcctcggcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
|| ||||||||||| || |||||||| || || ||||||||||| ||||||||||||||
Sbjct: 10826838 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 10826780
Score = 46.1 bits (23), Expect = 0.028
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 480 caccttgaagatgtagatcttgt 502
|||||||||||||||||||||||
Sbjct: 7877597 caccttgaagatgtagatcttgt 7877619
Score = 44.1 bits (22), Expect = 0.11
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 394 agcttctcgaagatgtcgttgatgaa 419
||||||||| ||||||||||||||||
Sbjct: 11772115 agcttctcggagatgtcgttgatgaa 11772140
Score = 44.1 bits (22), Expect = 0.11
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 394 agcttctcgaagatgtcgttgatgaa 419
|||||||||||||||||||| |||||
Sbjct: 849357 agcttctcgaagatgtcgttaatgaa 849332
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 392 bits (198), Expect = e-106
Identities = 249/266 (93%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28127541 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 28127482
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 28127481 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 28127422
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 28127421 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 28127362
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| || ||||||
Sbjct: 28127361 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 28127302
Query: 487 aagatgtagatcttgtacgtctccac 512
||||||||||||||||| ||||||||
Sbjct: 28127301 aagatgtagatcttgtaggtctccac 28127276
Score = 309 bits (156), Expect = 1e-081
Identities = 261/296 (88%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 22161316 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 22161257
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
|||||||| || || |||||||||||||||||||| ||||| || |||||||||||||||
Sbjct: 22161256 aggacgagacgaacagaggtctggatctcgcgggaggtgattgtgggcttcttgttgtac 22161197
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
| || ||| | || |||||| | | ||||||||||| |||||||||| |||||| |||
Sbjct: 22161196 ctggcaagcctcgcggcctcctgctcgagcttctcgaaaatgtcgttgacgaaggaattc 22161137
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 22161136 atgatggacatggccttggaggagattcctatgtctggatgcacctgcttgagcaccttg 22161077
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttctt 542
||||||||||| || || |||||||| ||||| ||||||||||||||||||||
Sbjct: 22161076 aagatgtagattttataggtctccacgcttttcttcgccttcttcttccccttctt 22161021
Score = 137 bits (69), Expect = 1e-029
Identities = 107/119 (89%), Gaps = 3/119 (2%)
Strand = Plus / Minus
Query: 571 cccgcggggagccgcttctcagccttgggcttcttccccgccgt---ggccttctccgcc 627
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 28127211 cccgcggggagccgcttctccgccttgggcttcttccccgccgccggggccttctccgcc 28127152
Query: 628 gccggctcctcctcggcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
|| ||||||||||| || |||||||| || || ||||||||||| ||||||||||||||
Sbjct: 28127151 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 28127093
Score = 67.9 bits (34), Expect = 8e-009
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 397 ttctcgaagatgtcgttgatgaaggagttcatgatgga 434
|||||||||||||| |||||||||||||||||||||||
Sbjct: 8223364 ttctcgaagatgtcattgatgaaggagttcatgatgga 8223401
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 470 cctgcttcagcaccttgaagatgtagatcttgtacgtctcca 511
|||||||| ||||||||||||||||||| ||||| |||||||
Sbjct: 6814313 cctgcttctgcaccttgaagatgtagatattgtaggtctcca 6814354
Score = 52.0 bits (26), Expect = 5e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 394 agcttctcgaagatgtcgttgatgaa 419
||||||||||||||||||||||||||
Sbjct: 3719856 agcttctcgaagatgtcgttgatgaa 3719881
Score = 46.1 bits (23), Expect = 0.028
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 480 caccttgaagatgtagatcttgt 502
|||||||||||||||||||||||
Sbjct: 25177910 caccttgaagatgtagatcttgt 25177932
Score = 44.1 bits (22), Expect = 0.11
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 394 agcttctcgaagatgtcgttgatgaa 419
||||||||| ||||||||||||||||
Sbjct: 29072428 agcttctcggagatgtcgttgatgaa 29072453
Score = 44.1 bits (22), Expect = 0.11
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 394 agcttctcgaagatgtcgttgatgaa 419
|||||||||||||||||||| |||||
Sbjct: 18149670 agcttctcgaagatgtcgttaatgaa 18149645
Score = 44.1 bits (22), Expect = 0.11
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 394 agcttctcgaagatgtcgttgatgaa 419
||||||||||||||||| ||||||||
Sbjct: 6128351 agcttctcgaagatgtctttgatgaa 6128326
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 392 bits (198), Expect = e-106
Identities = 249/266 (93%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28392155 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 28392096
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 28392095 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 28392036
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 28392035 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 28391976
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| || ||||||
Sbjct: 28391975 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 28391916
Query: 487 aagatgtagatcttgtacgtctccac 512
||||||||||||||||| ||||||||
Sbjct: 28391915 aagatgtagatcttgtaggtctccac 28391890
Score = 309 bits (156), Expect = 1e-081
Identities = 261/296 (88%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 22480461 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 22480402
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
|||||||| || || |||||||||||||||||||| ||||| || |||||||||||||||
Sbjct: 22480401 aggacgagacgaacagaggtctggatctcgcgggaggtgattgtgggcttcttgttgtac 22480342
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
| || ||| | || |||||| | | ||||||||||| |||||||||| |||||| |||
Sbjct: 22480341 ctggcaagcctcgcggcctcctgctcgagcttctcgaaaatgtcgttgacgaaggaattc 22480282
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| ||||| || ||||| || ||||||||||| |||||||||
Sbjct: 22480281 atgatggacatggccttggaggagattcctatgtctggatgcacctgcttgagcaccttg 22480222
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttctt 542
||||||||||| || || |||||||| ||||| ||||||||||||||||||||
Sbjct: 22480221 aagatgtagattttataggtctccacgcttttcttcgccttcttcttccccttctt 22480166
Score = 137 bits (69), Expect = 1e-029
Identities = 107/119 (89%), Gaps = 3/119 (2%)
Strand = Plus / Minus
Query: 571 cccgcggggagccgcttctcagccttgggcttcttccccgccgt---ggccttctccgcc 627
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 28391825 cccgcggggagccgcttctccgccttgggcttcttccccgccgccggggccttctccgcc 28391766
Query: 628 gccggctcctcctcggcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
|| ||||||||||| || |||||||| || || ||||||||||| ||||||||||||||
Sbjct: 28391765 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 28391707
Score = 60.0 bits (30), Expect = 2e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 470 cctgcttcagcaccttgaagatgtagatcttgtacgtctcca 511
|||||||| ||||||||||||||||||| ||||| |||||||
Sbjct: 6896155 cctgcttctgcaccttgaagatgtagatattgtaggtctcca 6896196
Score = 52.0 bits (26), Expect = 5e-004
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 394 agcttctcgaagatgtcgttgatgaa 419
||||||||||||||||||||||||||
Sbjct: 3720744 agcttctcgaagatgtcgttgatgaa 3720769
Score = 46.1 bits (23), Expect = 0.028
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 480 caccttgaagatgtagatcttgt 502
|||||||||||||||||||||||
Sbjct: 25447111 caccttgaagatgtagatcttgt 25447133
Score = 44.1 bits (22), Expect = 0.11
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 394 agcttctcgaagatgtcgttgatgaa 419
||||||||| ||||||||||||||||
Sbjct: 29356936 agcttctcggagatgtcgttgatgaa 29356961
Score = 44.1 bits (22), Expect = 0.11
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 394 agcttctcgaagatgtcgttgatgaa 419
|||||||||||||||||||| |||||
Sbjct: 18422088 agcttctcgaagatgtcgttaatgaa 18422063
Score = 44.1 bits (22), Expect = 0.11
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 394 agcttctcgaagatgtcgttgatgaa 419
||||||||||||||||| ||||||||
Sbjct: 6238958 agcttctcgaagatgtctttgatgaa 6238933
>gb|AU032007.1|AU032007 AU032007 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3125_8Z, mRNA sequence
Length = 581
Score = 391 bits (197), Expect = e-106
Identities = 248/265 (93%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 304
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 303 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 244
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 243 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 184
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| || ||||||
Sbjct: 183 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 124
Query: 487 aagatgtagatcttgtacgtctcca 511
||||||||||||||||| |||||||
Sbjct: 123 aagatgtagatcttgtaggtctcca 99
Score = 58.0 bits (29), Expect = 7e-006
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 571 cccgcggggagccgcttctcagccttgggcttc 603
|||||||||||||||||||| ||||||||||||
Sbjct: 33 cccgcggggagccgcttctccgccttgggcttc 1
>gb|CF290947.1|CF290947 14ROOT--01-D01.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-D01, mRNA sequence
Length = 672
Score = 387 bits (195), Expect = e-105
Identities = 267/291 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 484
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 483 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 424
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| | |||| | || |||||||||||||||||||||||||||||||||
Sbjct: 423 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 364
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 363 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 304
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttcccc 537
||||||||||||||||| ||||| || |||||| ||||||||| |||||
Sbjct: 303 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctcccc 253
Score = 87.7 bits (44), Expect = 8e-015
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 615 ggccttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggc 674
|||||||||||| || ||||||||||| || |||||||| ||||| ||||||||||| ||
Sbjct: 163 ggccttctccgctgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgc 104
Query: 675 cttgggcgccat 686
||||||||||||
Sbjct: 103 cttgggcgccat 92
>gb|CB661775.1|CB661775 OSJNEd05B14.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05B14 5', mRNA sequence
Length = 820
Score = 385 bits (194), Expect = e-104
Identities = 275/302 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gtgaacttggtgaccgccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 440
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 439 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 380
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || || ||| |||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 379 cgggcgaggcgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttc 320
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||| |||||||||||||| ||||| || ||||||||||||||||||||||| ||||||
Sbjct: 319 atgatcgacatggccttggaggagattccgatgtccgggtgcacctgcttcaggaccttg 260
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||||||||| ||||| || |||||| ||||||||| |||||||||| |||
Sbjct: 259 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccccttcttgtcg 200
Query: 547 cc 548
||
Sbjct: 199 cc 198
Score = 79.8 bits (40), Expect = 2e-012
Identities = 93/110 (84%), Gaps = 3/110 (2%)
Strand = Plus / Minus
Query: 580 agccgcttctcagccttgggcttcttccccgccgtggccttctccgccgccggctcctcc 639
||||||||||| |||||||||||||||||||||| ||||||||||||| | ||||||
Sbjct: 160 agccgcttctccgccttgggcttcttccccgccggcgccttctccgccgacttctcctcg 101
Query: 640 tcg---gcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
|| || |||||||| | || ||||||||||| ||||||||||||||
Sbjct: 100 ccggctgcgggcttcttctccgccggcttcttctctgccttgggcgccat 51
>gb|CF334827.1|CF334827 JMT--04-E05.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--04-E05, mRNA sequence
Length = 655
Score = 385 bits (194), Expect = e-104
Identities = 275/302 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gtgaacttggtgaccgccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 541
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 540 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 481
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || || ||| |||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 480 cgggcgaggcgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttc 421
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||| |||||||||||||| ||||| || ||||||||||||||||||||||| ||||||
Sbjct: 420 atgatcgacatggccttggaggagattccgatgtccgggtgcacctgcttcaggaccttg 361
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||||||||| ||||| || |||||| ||||||||| |||||||||| |||
Sbjct: 360 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccccttcttgtcg 301
Query: 547 cc 548
||
Sbjct: 300 cc 299
Score = 79.8 bits (40), Expect = 2e-012
Identities = 93/110 (84%), Gaps = 3/110 (2%)
Strand = Plus / Minus
Query: 580 agccgcttctcagccttgggcttcttccccgccgtggccttctccgccgccggctcctcc 639
||||||||||| |||||||||||||||||||||| ||||||||||||| | ||||||
Sbjct: 261 agccgcttctccgccttgggcttcttccccgccggcgccttctccgccgacttctcctcg 202
Query: 640 tcg---gcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
|| || |||||||| | || ||||||||||| ||||||||||||||
Sbjct: 201 ccggctgcgggcttcttctccgccggcttcttctctgccttgggcgccat 152
>gb|CO435616.1|CO435616 OsMR682 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 869
Score = 385 bits (194), Expect = e-104
Identities = 275/302 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gtgaacttggtgaccgccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 496
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 495 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 436
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || || ||| |||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 435 cgggcgaggcgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttc 376
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||| |||||||||||||| ||||| || ||||||||||||||||||||||| ||||||
Sbjct: 375 atgatcgacatggccttggaggagattccgatgtccgggtgcacctgcttcaggaccttg 316
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||||||||| ||||| || |||||| ||||||||| |||||||||| |||
Sbjct: 315 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccccttcttgtcg 256
Query: 547 cc 548
||
Sbjct: 255 cc 254
Score = 79.8 bits (40), Expect = 2e-012
Identities = 93/110 (84%), Gaps = 3/110 (2%)
Strand = Plus / Minus
Query: 580 agccgcttctcagccttgggcttcttccccgccgtggccttctccgccgccggctcctcc 639
||||||||||| |||||||||||||||||||||| ||||||||||||| | ||||||
Sbjct: 216 agccgcttctccgccttgggcttcttccccgccggcgccttctccgccgacttctcctcg 157
Query: 640 tcg---gcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
|| || |||||||| | || ||||||||||| ||||||||||||||
Sbjct: 156 ccggctgcgggcttcttctccgccggcttcttctctgccttgggcgccat 107
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0002D01, from chromosome 3, complete sequence
Length = 187589
Score = 385 bits (194), Expect = e-104
Identities = 275/302 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162723 gtgaacttggtgaccgccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 162664
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 162663 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 162604
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || || ||| |||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 162603 cgggcgaggcgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttc 162544
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||| |||||||||||||| ||||| || ||||||||||||||||||||||| ||||||
Sbjct: 162543 atgatcgacatggccttggaggagattccgatgtccgggtgcacctgcttcaggaccttg 162484
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||||||||| ||||| || |||||| ||||||||| |||||||||| |||
Sbjct: 162483 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccccttcttgtcg 162424
Query: 547 cc 548
||
Sbjct: 162423 cc 162422
Score = 79.8 bits (40), Expect = 2e-012
Identities = 93/110 (84%), Gaps = 3/110 (2%)
Strand = Plus / Minus
Query: 580 agccgcttctcagccttgggcttcttccccgccgtggccttctccgccgccggctcctcc 639
||||||||||| |||||||||||||||||||||| ||||||||||||| | ||||||
Sbjct: 162384 agccgcttctccgccttgggcttcttccccgccggcgccttctccgccgacttctcctcg 162325
Query: 640 tcg---gcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
|| || |||||||| | || ||||||||||| ||||||||||||||
Sbjct: 162324 ccggctgcgggcttcttctccgccggcttcttctctgccttgggcgccat 162275
>gb|AACV01006345.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006345, whole
genome shotgun sequence
Length = 12782
Score = 385 bits (194), Expect = e-104
Identities = 275/302 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1885 gtgaacttggtgaccgccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 1826
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 1825 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 1766
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || || ||| |||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 1765 cgggcgaggcgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttc 1706
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||| |||||||||||||| ||||| || ||||||||||||||||||||||| ||||||
Sbjct: 1705 atgatcgacatggccttggaggagattccgatgtccgggtgcacctgcttcaggaccttg 1646
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||||||||| ||||| || |||||| ||||||||| |||||||||| |||
Sbjct: 1645 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccccttcttgtcg 1586
Query: 547 cc 548
||
Sbjct: 1585 cc 1584
Score = 79.8 bits (40), Expect = 2e-012
Identities = 93/110 (84%), Gaps = 3/110 (2%)
Strand = Plus / Minus
Query: 580 agccgcttctcagccttgggcttcttccccgccgtggccttctccgccgccggctcctcc 639
||||||||||| |||||||||||||||||||||| ||||||||||||| | ||||||
Sbjct: 1546 agccgcttctccgccttgggcttcttccccgccggcgccttctccgccgacttctcctcg 1487
Query: 640 tcg---gcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
|| || |||||||| | || ||||||||||| ||||||||||||||
Sbjct: 1486 ccggctgcgggcttcttctccgccggcttcttctctgccttgggcgccat 1437
>ref|NT_107192.1| Oryza sativa (japonica cultivar-group)
Length = 4781381
Score = 385 bits (194), Expect = e-104
Identities = 275/302 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809260 gtgaacttggtgaccgccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 809201
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 809200 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 809141
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || || ||| |||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 809140 cgggcgaggcgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttc 809081
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||| |||||||||||||| ||||| || ||||||||||||||||||||||| ||||||
Sbjct: 809080 atgatcgacatggccttggaggagattccgatgtccgggtgcacctgcttcaggaccttg 809021
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||||||||| ||||| || |||||| ||||||||| |||||||||| |||
Sbjct: 809020 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccccttcttgtcg 808961
Query: 547 cc 548
||
Sbjct: 808960 cc 808959
Score = 97.6 bits (49), Expect = 9e-018
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 396 cttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagatgcc 455
||||| |||||| ||||||||||||||||| ||||||| ||||||||| || || |||||
Sbjct: 2909322 cttcttgaagatatcgttgatgaaggagttgatgatggtcatggccttagaggatatgcc 2909381
Query: 456 aatgtccgggtgcacctgcttcagcaccttgaagatgtagatcttgtacgtctccac 512
||||||| | | | || ||||| |||||||| ||||||||||| |||||||||||
Sbjct: 2909382 aatgtccagatttatctatttcagtaccttgaatatgtagatcttatacgtctccac 2909438
Score = 79.8 bits (40), Expect = 2e-012
Identities = 93/110 (84%), Gaps = 3/110 (2%)
Strand = Plus / Minus
Query: 580 agccgcttctcagccttgggcttcttccccgccgtggccttctccgccgccggctcctcc 639
||||||||||| |||||||||||||||||||||| ||||||||||||| | ||||||
Sbjct: 808921 agccgcttctccgccttgggcttcttccccgccggcgccttctccgccgacttctcctcg 808862
Query: 640 tcg---gcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
|| || |||||||| | || ||||||||||| ||||||||||||||
Sbjct: 808861 ccggctgcgggcttcttctccgccggcttcttctctgccttgggcgccat 808812
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 385 bits (194), Expect = e-104
Identities = 275/302 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9459088 gtgaacttggtgaccgccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 9459029
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 9459028 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 9458969
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || || ||| |||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 9458968 cgggcgaggcgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttc 9458909
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||| |||||||||||||| ||||| || ||||||||||||||||||||||| ||||||
Sbjct: 9458908 atgatcgacatggccttggaggagattccgatgtccgggtgcacctgcttcaggaccttg 9458849
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||||||||| ||||| || |||||| ||||||||| |||||||||| |||
Sbjct: 9458848 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccccttcttgtcg 9458789
Query: 547 cc 548
||
Sbjct: 9458788 cc 9458787
Score = 97.6 bits (49), Expect = 9e-018
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 396 cttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagatgcc 455
||||| |||||| ||||||||||||||||| ||||||| ||||||||| || || |||||
Sbjct: 11690265 cttcttgaagatatcgttgatgaaggagttgatgatggtcatggccttagaggatatgcc 11690324
Query: 456 aatgtccgggtgcacctgcttcagcaccttgaagatgtagatcttgtacgtctccac 512
||||||| | | | || ||||| |||||||| ||||||||||| |||||||||||
Sbjct: 11690325 aatgtccagatttatctatttcagtaccttgaatatgtagatcttatacgtctccac 11690381
Score = 79.8 bits (40), Expect = 2e-012
Identities = 93/110 (84%), Gaps = 3/110 (2%)
Strand = Plus / Minus
Query: 580 agccgcttctcagccttgggcttcttccccgccgtggccttctccgccgccggctcctcc 639
||||||||||| |||||||||||||||||||||| ||||||||||||| | ||||||
Sbjct: 9458749 agccgcttctccgccttgggcttcttccccgccggcgccttctccgccgacttctcctcg 9458690
Query: 640 tcg---gcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
|| || |||||||| | || ||||||||||| ||||||||||||||
Sbjct: 9458689 ccggctgcgggcttcttctccgccggcttcttctctgccttgggcgccat 9458640
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 385 bits (194), Expect = e-104
Identities = 275/302 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9651450 gtgaacttggtgaccgccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 9651391
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 9651390 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 9651331
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || || ||| |||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 9651330 cgggcgaggcgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttc 9651271
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||| |||||||||||||| ||||| || ||||||||||||||||||||||| ||||||
Sbjct: 9651270 atgatcgacatggccttggaggagattccgatgtccgggtgcacctgcttcaggaccttg 9651211
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||||||||| ||||| || |||||| ||||||||| |||||||||| |||
Sbjct: 9651210 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccccttcttgtcg 9651151
Query: 547 cc 548
||
Sbjct: 9651150 cc 9651149
Score = 97.6 bits (49), Expect = 9e-018
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 396 cttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagatgcc 455
||||| |||||| ||||||||||||||||| ||||||| ||||||||| || || |||||
Sbjct: 11882627 cttcttgaagatatcgttgatgaaggagttgatgatggtcatggccttagaggatatgcc 11882686
Query: 456 aatgtccgggtgcacctgcttcagcaccttgaagatgtagatcttgtacgtctccac 512
||||||| | | | || ||||| |||||||| ||||||||||| |||||||||||
Sbjct: 11882687 aatgtccagatttatctatttcagtaccttgaatatgtagatcttatacgtctccac 11882743
Score = 79.8 bits (40), Expect = 2e-012
Identities = 93/110 (84%), Gaps = 3/110 (2%)
Strand = Plus / Minus
Query: 580 agccgcttctcagccttgggcttcttccccgccgtggccttctccgccgccggctcctcc 639
||||||||||| |||||||||||||||||||||| ||||||||||||| | ||||||
Sbjct: 9651111 agccgcttctccgccttgggcttcttccccgccggcgccttctccgccgacttctcctcg 9651052
Query: 640 tcg---gcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
|| || |||||||| | || ||||||||||| ||||||||||||||
Sbjct: 9651051 ccggctgcgggcttcttctccgccggcttcttctctgccttgggcgccat 9651002
Score = 56.0 bits (28), Expect = 3e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 481 accttgaagatgtagatcttgtacgtct 508
||||||||||||||||||||||||||||
Sbjct: 26325705 accttgaagatgtagatcttgtacgtct 26325732
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 394 agcttctcgaagatgtcgttgatgaaggagttcatg 429
|||||||||||||||||| ||||||||||||||||
Sbjct: 26325620 agcttctcgaagatgtcgaggatgaaggagttcatg 26325655
Score = 48.1 bits (24), Expect = 0.007
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 610 gccgtggccttctccgccgccggctcctcctcggcaggcttctt 653
|||| |||||||||||||| ||||||||||| || ||||||||
Sbjct: 22322784 gccggggccttctccgccgtgggctcctcctccgcgggcttctt 22322827
Score = 42.1 bits (21), Expect = 0.44
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 480 caccttgaagatgtagatcttgtacgtct 508
||||||||| |||||||||||||| ||||
Sbjct: 29266805 caccttgaaaatgtagatcttgtaggtct 29266777
Score = 42.1 bits (21), Expect = 0.44
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 484 ttgaagatgtagatcttgtacgtct 508
|||||||||||||||||||| ||||
Sbjct: 28025735 ttgaagatgtagatcttgtaggtct 28025711
Score = 42.1 bits (21), Expect = 0.44
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 483 cttgaagatgtagatcttgtacgtc 507
|||||||||||||||||| ||||||
Sbjct: 24558708 cttgaagatgtagatcttatacgtc 24558684
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 385 bits (194), Expect = e-104
Identities = 275/302 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9463444 gtgaacttggtgaccgccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 9463385
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 9463384 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 9463325
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || || ||| |||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 9463324 cgggcgaggcgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttc 9463265
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||| |||||||||||||| ||||| || ||||||||||||||||||||||| ||||||
Sbjct: 9463264 atgatcgacatggccttggaggagattccgatgtccgggtgcacctgcttcaggaccttg 9463205
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||||||||| ||||| || |||||| ||||||||| |||||||||| |||
Sbjct: 9463204 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccccttcttgtcg 9463145
Query: 547 cc 548
||
Sbjct: 9463144 cc 9463143
Score = 97.6 bits (49), Expect = 9e-018
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 396 cttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagatgcc 455
||||| |||||| ||||||||||||||||| ||||||| ||||||||| || || |||||
Sbjct: 11563825 cttcttgaagatatcgttgatgaaggagttgatgatggtcatggccttagaggatatgcc 11563884
Query: 456 aatgtccgggtgcacctgcttcagcaccttgaagatgtagatcttgtacgtctccac 512
||||||| | | | || ||||| |||||||| ||||||||||| |||||||||||
Sbjct: 11563885 aatgtccagatttatctatttcagtaccttgaatatgtagatcttatacgtctccac 11563941
Score = 79.8 bits (40), Expect = 2e-012
Identities = 93/110 (84%), Gaps = 3/110 (2%)
Strand = Plus / Minus
Query: 580 agccgcttctcagccttgggcttcttccccgccgtggccttctccgccgccggctcctcc 639
||||||||||| |||||||||||||||||||||| ||||||||||||| | ||||||
Sbjct: 9463105 agccgcttctccgccttgggcttcttccccgccggcgccttctccgccgacttctcctcg 9463046
Query: 640 tcg---gcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
|| || |||||||| | || ||||||||||| ||||||||||||||
Sbjct: 9463045 ccggctgcgggcttcttctccgccggcttcttctctgccttgggcgccat 9462996
Score = 56.0 bits (28), Expect = 3e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 481 accttgaagatgtagatcttgtacgtct 508
||||||||||||||||||||||||||||
Sbjct: 25718953 accttgaagatgtagatcttgtacgtct 25718980
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 394 agcttctcgaagatgtcgttgatgaaggagttcatg 429
|||||||||||||||||| ||||||||||||||||
Sbjct: 25718868 agcttctcgaagatgtcgaggatgaaggagttcatg 25718903
Score = 48.1 bits (24), Expect = 0.007
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 610 gccgtggccttctccgccgccggctcctcctcggcaggcttctt 653
|||| |||||||||||||| ||||||||||| || ||||||||
Sbjct: 21700454 gccggggccttctccgccgtgggctcctcctccgcgggcttctt 21700497
Score = 42.1 bits (21), Expect = 0.44
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 480 caccttgaagatgtagatcttgtacgtct 508
||||||||| |||||||||||||| ||||
Sbjct: 28307783 caccttgaaaatgtagatcttgtaggtct 28307755
Score = 42.1 bits (21), Expect = 0.44
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 484 ttgaagatgtagatcttgtacgtct 508
|||||||||||||||||||| ||||
Sbjct: 27094797 ttgaagatgtagatcttgtaggtct 27094773
Score = 42.1 bits (21), Expect = 0.44
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 483 cttgaagatgtagatcttgtacgtc 507
|||||||||||||||||| ||||||
Sbjct: 23987474 cttgaagatgtagatcttatacgtc 23987450
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 385 bits (194), Expect = e-104
Identities = 275/302 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9465323 gtgaacttggtgaccgccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 9465264
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 9465263 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 9465204
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || || ||| |||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 9465203 cgggcgaggcgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttc 9465144
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||| |||||||||||||| ||||| || ||||||||||||||||||||||| ||||||
Sbjct: 9465143 atgatcgacatggccttggaggagattccgatgtccgggtgcacctgcttcaggaccttg 9465084
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
||||||||||||||||| ||||| || |||||| ||||||||| |||||||||| |||
Sbjct: 9465083 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccccttcttgtcg 9465024
Query: 547 cc 548
||
Sbjct: 9465023 cc 9465022
Score = 97.6 bits (49), Expect = 9e-018
Identities = 100/117 (85%)
Strand = Plus / Plus
Query: 396 cttctcgaagatgtcgttgatgaaggagttcatgatggacatggccttggacgagatgcc 455
||||| |||||| ||||||||||||||||| ||||||| ||||||||| || || |||||
Sbjct: 11567062 cttcttgaagatatcgttgatgaaggagttgatgatggtcatggccttagaggatatgcc 11567121
Query: 456 aatgtccgggtgcacctgcttcagcaccttgaagatgtagatcttgtacgtctccac 512
||||||| | | | || ||||| |||||||| ||||||||||| |||||||||||
Sbjct: 11567122 aatgtccagatttatctatttcagtaccttgaatatgtagatcttatacgtctccac 11567178
Score = 79.8 bits (40), Expect = 2e-012
Identities = 93/110 (84%), Gaps = 3/110 (2%)
Strand = Plus / Minus
Query: 580 agccgcttctcagccttgggcttcttccccgccgtggccttctccgccgccggctcctcc 639
||||||||||| |||||||||||||||||||||| ||||||||||||| | ||||||
Sbjct: 9464984 agccgcttctccgccttgggcttcttccccgccggcgccttctccgccgacttctcctcg 9464925
Query: 640 tcg---gcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
|| || |||||||| | || ||||||||||| ||||||||||||||
Sbjct: 9464924 ccggctgcgggcttcttctccgccggcttcttctctgccttgggcgccat 9464875
Score = 56.0 bits (28), Expect = 3e-005
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 481 accttgaagatgtagatcttgtacgtct 508
||||||||||||||||||||||||||||
Sbjct: 25627644 accttgaagatgtagatcttgtacgtct 25627671
Score = 56.0 bits (28), Expect = 3e-005
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 394 agcttctcgaagatgtcgttgatgaaggagttcatg 429
|||||||||||||||||| ||||||||||||||||
Sbjct: 25627559 agcttctcgaagatgtcgaggatgaaggagttcatg 25627594
Score = 48.1 bits (24), Expect = 0.007
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 610 gccgtggccttctccgccgccggctcctcctcggcaggcttctt 653
|||| |||||||||||||| ||||||||||| || ||||||||
Sbjct: 21707425 gccggggccttctccgccgtgggctcctcctccgcgggcttctt 21707468
Score = 42.1 bits (21), Expect = 0.44
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 480 caccttgaagatgtagatcttgtacgtct 508
||||||||| |||||||||||||| ||||
Sbjct: 28216459 caccttgaaaatgtagatcttgtaggtct 28216431
Score = 42.1 bits (21), Expect = 0.44
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 484 ttgaagatgtagatcttgtacgtct 508
|||||||||||||||||||| ||||
Sbjct: 27003474 ttgaagatgtagatcttgtaggtct 27003450
Score = 42.1 bits (21), Expect = 0.44
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 483 cttgaagatgtagatcttgtacgtc 507
|||||||||||||||||| ||||||
Sbjct: 24070005 cttgaagatgtagatcttatacgtc 24069981
>gb|AU070936.1|AU070936 AU070936 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10485_1A, mRNA sequence
Length = 712
Score = 377 bits (190), Expect = e-102
Identities = 265/290 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| || || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 524 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 465
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 464 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 405
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 404 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 345
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 344 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 285
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccc 536
||||||||||||||||| ||||| || |||||| ||||||||| ||||
Sbjct: 284 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 235
Score = 109 bits (55), Expect = 2e-021
Identities = 110/130 (84%), Gaps = 10/130 (7%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggccttct---- 622
|||||| ||||||||||||||||| ||||||||||||||||| |||| ||||||||
Sbjct: 195 cttgccggcggggagccgcttctccgccttgggcttcttcccggccggggccttctcggc 136
Query: 623 ------ccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcct 676
||||||| ||||||||||| || |||||||| ||||| ||||||||||| ||||
Sbjct: 135 cttctnccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcct 76
Query: 677 tgggcgccat 686
||||||||||
Sbjct: 75 tgggcgccat 66
>gb|CA998848.1|CA998848 S345M_G12 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 564
Score = 377 bits (190), Expect = e-102
Identities = 265/290 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| || || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 339 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 280
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 279 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 220
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 219 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 160
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 159 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 100
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccc 536
||||||||||||||||| ||||| || |||||| ||||||||| ||||
Sbjct: 99 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 50
>gb|BP184585.1|BP184585 BP184585 pNS rice panicle cDNA, flowering stage Oryza sativa
(japonica cultivar-group) cDNA clone 13YPG059, mRNA
sequence
Length = 626
Score = 377 bits (190), Expect = e-102
Identities = 265/290 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| || || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 521 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 462
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 461 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 402
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 401 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 342
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 341 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 282
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccc 536
||||||||||||||||| ||||| || |||||| ||||||||| ||||
Sbjct: 281 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 232
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| ||||||||||||||||| ||||||||||||||||| |||| | ||
Sbjct: 192 cttgccggcggggagccgcttctccgccttgggcttcttcccggccggggccttctcggc 133
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 132 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 73
Query: 678 gggcgccat 686
|||||||||
Sbjct: 72 gggcgccat 64
>gb|BP184926.1|BP184926 BP184926 pNS rice callus cDNA Oryza sativa (japonica
cultivar-group) cDNA clone 23C4AG024, mRNA sequence
Length = 663
Score = 377 bits (190), Expect = e-102
Identities = 265/290 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| || || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 533 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 474
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 473 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 414
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 413 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 354
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 353 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 294
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccc 536
||||||||||||||||| ||||| || |||||| ||||||||| ||||
Sbjct: 293 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 244
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| ||||||||||||||||| ||||||||||||||||| |||| | ||
Sbjct: 204 cttgccggcggggagccgcttctccgccttgggcttcttcccggccggggccttctcggc 145
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 144 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 85
Query: 678 gggcgccat 686
|||||||||
Sbjct: 84 gggcgccat 76
>dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0030H07
Length = 168253
Score = 377 bits (190), Expect = e-102
Identities = 265/290 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| || || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 78643 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 78584
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 78583 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 78524
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 78523 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 78464
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 78463 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 78404
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccc 536
||||||||||||||||| ||||| || |||||| ||||||||| ||||
Sbjct: 78403 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 78354
Score = 373 bits (188), Expect = e-100
Identities = 245/264 (92%)
Strand = Plus / Plus
Query: 246 agtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccggg 305
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 63605 agtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccggg 63664
Query: 306 gaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgta 365
||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 63665 gaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgta 63724
Query: 366 ccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagtt 425
|| || |||||||| ||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 63725 gcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagtt 63784
Query: 426 catgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcacctt 485
||||||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||
Sbjct: 63785 catgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcacctt 63844
Query: 486 gaagatgtagatcttgtacgtctc 509
|||||||||||||||||| |||||
Sbjct: 63845 gaagatgtagatcttgtaggtctc 63868
Score = 367 bits (185), Expect = 6e-099
Identities = 260/285 (91%)
Strand = Plus / Plus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26243 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 26302
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 26303 aggacgaggcggacggaggtctggatctcccgtgaggtgatggtgggcttcttgttgtag 26362
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| | |||| | || |||||||||||||||||||||||||||||||||
Sbjct: 26363 cgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 26422
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 26423 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 26482
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttc 531
||||||||||||||||| ||||| || |||||| |||||||||
Sbjct: 26483 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 26527
Score = 359 bits (181), Expect = 1e-096
Identities = 268/297 (90%)
Strand = Plus / Plus
Query: 235 gcctaggagctagtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcg 294
||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 44042 gcctaggaggaagtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcg 44101
Query: 295 agctcgccggggaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggc 354
|||||||||||||||||||||||||||| |||||||||||| ||||| |||||||| |||
Sbjct: 44102 agctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggc 44161
Query: 355 ttcttgttgtaccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttg 414
||||||||||| ||||| |||||||| | ||| | || |||||||||||||| || |||
Sbjct: 44162 ttcttgttgtagcgcgcgagcttggcggactctccggcgagcttctcgaagatatcattg 44221
Query: 415 atgaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgc 474
|||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 44222 atgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgc 44281
Query: 475 ttcagcaccttgaagatgtagatcttgtacgtctccaccgacttctttgccttcttc 531
|| |||||||||||||||||||||||||| ||||| || |||||| |||||||||
Sbjct: 44282 ttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 44338
Score = 357 bits (180), Expect = 6e-096
Identities = 240/260 (92%)
Strand = Plus / Plus
Query: 250 aacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccggggagg 309
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50670 aacttggtgacggccttcgtgccctcggagacggcgtgcttggcgagctcgccggggagg 50729
Query: 310 acgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtaccgc 369
|||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||| ||
Sbjct: 50730 acgaggcggacggaggtctgaatctcccgggaggtgatggtgggcttcttgttgtagcgg 50789
Query: 370 gccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttcatg 429
|| |||||||| | |||| | || ||||||||||||||||||||||||||||||||||||
Sbjct: 50790 gcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttcatg 50849
Query: 430 atggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttgaag 489
||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||||||
Sbjct: 50850 atggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttgaag 50909
Query: 490 atgtagatcttgtacgtctc 509
|||||||||||||| |||||
Sbjct: 50910 atgtagatcttgtaggtctc 50929
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| ||||||||||||||||| ||||||||||||||||| |||| | ||
Sbjct: 78314 cttgccggcggggagccgcttctccgccttgggcttcttcccggccggggccttctcggc 78255
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 78254 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 78195
Query: 678 gggcgccat 686
|||||||||
Sbjct: 78194 gggcgccat 78186
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| |||||||| |||||||| |||||||||||||||||||||| | ||
Sbjct: 63929 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 63988
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 63989 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 64048
Query: 678 gggcgccat 686
|||||||||
Sbjct: 64049 gggcgccat 64057
Score = 105 bits (53), Expect = 4e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| |||||||| |||||||| |||||||||||||||||||||| | ||
Sbjct: 44377 cttgccggcggggaggcgcttctccgccttgggcttcttccccgccggggccttctcggc 44436
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| || || ||||||||||| |||||
Sbjct: 44437 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 44496
Query: 678 gggcgccat 686
|||||||||
Sbjct: 44497 gggcgccat 44505
Score = 97.6 bits (49), Expect = 9e-018
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggccttctccg- 625
|||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||| |
Sbjct: 50990 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 51049
Query: 626 --------ccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 51050 cttctctgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 51109
Query: 678 gggcgccat 686
|||||||||
Sbjct: 51110 gggcgccat 51118
Score = 97.6 bits (49), Expect = 9e-018
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggcc-------- 618
|||||| |||||||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 26566 cttgccggcggggagacgcttctccgccttgggcttcttccccgccagggccttctcggc 26625
Query: 619 -ttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
||||||||||| ||||||||||| || |||||||| || || ||||||||||| |||||
Sbjct: 26626 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 26685
Query: 678 gggcgccat 686
|||||||||
Sbjct: 26686 gggcgccat 26694
>gb|AACV01000215.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000215, whole
genome shotgun sequence
Length = 50442
Score = 377 bits (190), Expect = e-102
Identities = 265/290 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| || || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 27769 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 27710
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 27709 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 27650
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 27649 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 27590
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 27589 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 27530
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccc 536
||||||||||||||||| ||||| || |||||| ||||||||| ||||
Sbjct: 27529 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 27480
Score = 373 bits (188), Expect = e-100
Identities = 245/264 (92%)
Strand = Plus / Plus
Query: 246 agtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccggg 305
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 12731 agtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccggg 12790
Query: 306 gaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgta 365
||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 12791 gaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgta 12850
Query: 366 ccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagtt 425
|| || |||||||| ||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 12851 gcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagtt 12910
Query: 426 catgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcacctt 485
||||||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||
Sbjct: 12911 catgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcacctt 12970
Query: 486 gaagatgtagatcttgtacgtctc 509
|||||||||||||||||| |||||
Sbjct: 12971 gaagatgtagatcttgtaggtctc 12994
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| ||||||||||||||||| ||||||||||||||||| |||| | ||
Sbjct: 27440 cttgccggcggggagccgcttctccgccttgggcttcttcccggccggggccttctcggc 27381
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 27380 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 27321
Query: 678 gggcgccat 686
|||||||||
Sbjct: 27320 gggcgccat 27312
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| |||||||| |||||||| |||||||||||||||||||||| | ||
Sbjct: 13055 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 13114
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 13115 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 13174
Query: 678 gggcgccat 686
|||||||||
Sbjct: 13175 gggcgccat 13183
Score = 97.6 bits (49), Expect = 9e-018
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggccttctccg- 625
|||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||| |
Sbjct: 113 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 172
Query: 626 --------ccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 173 cttctctgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 232
Query: 678 gggcgccat 686
|||||||||
Sbjct: 233 gggcgccat 241
Score = 61.9 bits (31), Expect = 5e-007
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 471 ctgcttcagcaccttgaagatgtagatcttgtacgtctc 509
|||||| |||||||||||||||||||||||||| |||||
Sbjct: 14 ctgcttgagcaccttgaagatgtagatcttgtaggtctc 52
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 377 bits (190), Expect = e-102
Identities = 265/290 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| || || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2869447 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 2869388
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 2869387 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2869328
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 2869327 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 2869268
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 2869267 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2869208
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccc 536
||||||||||||||||| ||||| || |||||| ||||||||| ||||
Sbjct: 2869207 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 2869158
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2671732 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2671673
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 2671672 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2671613
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| | |||| | || |||||||||||||||||||||||||||||||||
Sbjct: 2671612 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 2671553
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| || || ||||| |||||||| |||||||||
Sbjct: 2671552 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 2671493
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttc 531
||||||||||||||||| ||||| || |||||| |||||||||
Sbjct: 2671492 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2671448
Score = 373 bits (188), Expect = e-100
Identities = 245/264 (92%)
Strand = Plus / Plus
Query: 246 agtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccggg 305
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2854409 agtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccggg 2854468
Query: 306 gaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgta 365
||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 2854469 gaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgta 2854528
Query: 366 ccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagtt 425
|| || |||||||| ||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 2854529 gcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagtt 2854588
Query: 426 catgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcacctt 485
||||||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||
Sbjct: 2854589 catgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcacctt 2854648
Query: 486 gaagatgtagatcttgtacgtctc 509
|||||||||||||||||| |||||
Sbjct: 2854649 gaagatgtagatcttgtaggtctc 2854672
Score = 367 bits (185), Expect = 6e-099
Identities = 260/285 (91%)
Strand = Plus / Plus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2817047 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2817106
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 2817107 aggacgaggcggacggaggtctggatctcccgtgaggtgatggtgggcttcttgttgtag 2817166
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| | |||| | || |||||||||||||||||||||||||||||||||
Sbjct: 2817167 cgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 2817226
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 2817227 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2817286
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttc 531
||||||||||||||||| ||||| || |||||| |||||||||
Sbjct: 2817287 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2817331
Score = 359 bits (181), Expect = 1e-096
Identities = 268/297 (90%)
Strand = Plus / Plus
Query: 235 gcctaggagctagtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcg 294
||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 2834846 gcctaggaggaagtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcg 2834905
Query: 295 agctcgccggggaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggc 354
|||||||||||||||||||||||||||| |||||||||||| ||||| |||||||| |||
Sbjct: 2834906 agctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggc 2834965
Query: 355 ttcttgttgtaccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttg 414
||||||||||| ||||| |||||||| | ||| | || |||||||||||||| || |||
Sbjct: 2834966 ttcttgttgtagcgcgcgagcttggcggactctccggcgagcttctcgaagatatcattg 2835025
Query: 415 atgaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgc 474
|||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 2835026 atgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgc 2835085
Query: 475 ttcagcaccttgaagatgtagatcttgtacgtctccaccgacttctttgccttcttc 531
|| |||||||||||||||||||||||||| ||||| || |||||| |||||||||
Sbjct: 2835086 ttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2835142
Score = 357 bits (180), Expect = 6e-096
Identities = 240/260 (92%)
Strand = Plus / Plus
Query: 250 aacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccggggagg 309
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2841474 aacttggtgacggccttcgtgccctcggagacggcgtgcttggcgagctcgccggggagg 2841533
Query: 310 acgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtaccgc 369
|||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||| ||
Sbjct: 2841534 acgaggcggacggaggtctgaatctcccgggaggtgatggtgggcttcttgttgtagcgg 2841593
Query: 370 gccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttcatg 429
|| |||||||| | |||| | || ||||||||||||||||||||||||||||||||||||
Sbjct: 2841594 gcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttcatg 2841653
Query: 430 atggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttgaag 489
||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||||||
Sbjct: 2841654 atggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttgaag 2841713
Query: 490 atgtagatcttgtacgtctc 509
|||||||||||||| |||||
Sbjct: 2841714 atgtagatcttgtaggtctc 2841733
Score = 347 bits (175), Expect = 6e-093
Identities = 262/291 (90%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||| || |||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2684055 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 2683996
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 2683995 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 2683936
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| | ||| | || ||||||||||||||||| |||||||||||||||
Sbjct: 2683935 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 2683876
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 2683875 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 2683816
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttcccc 537
||||||||||||||||| ||||| || |||||| ||||||||| |||||
Sbjct: 2683815 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctcccc 2683765
Score = 343 bits (173), Expect = 9e-092
Identities = 233/253 (92%)
Strand = Plus / Plus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17500452 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 17500511
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
|||||||||||||||||||||| |||||||||||| ||| | | ||||||||||||||
Sbjct: 17500512 aggacgaggcggacggaggtctagatctcgcgggaggtggcgatgggcttcttgttgtag 17500571
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || || | ||| |||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 17500572 cgggcgaggtgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttc 17500631
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||| |||||||||||||| |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 17500632 atgatcgacatggccttggaggagatgccgatgtccgggtgcacctgcttcaggaccttg 17500691
Query: 487 aagatgtagatct 499
|||||||||||||
Sbjct: 17500692 aagatgtagatct 17500704
Score = 305 bits (154), Expect = 2e-080
Identities = 265/302 (87%)
Strand = Plus / Plus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 36088112 gtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 36088171
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 36088172 aggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtcggcttcttgttgtag 36088231
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || || ||| |||||| || |||||||||||||| ||||||||||| ||||||
Sbjct: 36088232 cgggcgagacgggcggcctcctgggcgagcttctcgaagatatcgttgatgaacgagttc 36088291
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||| ||||||||||||||||| || || || || || ||||||||||| || ||||||
Sbjct: 36088292 atgatcgacatggccttggacgatatcccgatatcgggatgcacctgcttgaggaccttg 36088351
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
|| ||||||||||| || || || || |||||| ||||||||||||||||||||||||
Sbjct: 36088352 aaaatgtagatcttataagtttcgacgctcttcttggccttcttcttccccttcttctcg 36088411
Query: 547 cc 548
||
Sbjct: 36088412 cc 36088413
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| ||||||||||||||||| ||||||||||||||||| |||| | ||
Sbjct: 2869118 cttgccggcggggagccgcttctccgccttgggcttcttcccggccggggccttctcggc 2869059
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2869058 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2868999
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2868998 gggcgccat 2868990
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| |||||||| |||||||| |||||||||||||||||||||| | ||
Sbjct: 2854733 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 2854792
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2854793 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2854852
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2854853 gggcgccat 2854861
Score = 105 bits (53), Expect = 4e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| |||||||| |||||||| |||||||||||||||||||||| | ||
Sbjct: 2835181 cttgccggcggggaggcgcttctccgccttgggcttcttccccgccggggccttctcggc 2835240
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| || || ||||||||||| |||||
Sbjct: 2835241 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 2835300
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2835301 gggcgccat 2835309
Score = 105 bits (53), Expect = 4e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggc--------- 617
|||||| |||||||| |||||||| |||||||||||||||||||| | |||
Sbjct: 2671409 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2671350
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2671349 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgcctt 2671290
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2671289 gggcgccat 2671281
Score = 97.6 bits (49), Expect = 9e-018
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggccttctccg- 625
|||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||| |
Sbjct: 2841794 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2841853
Query: 626 --------ccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2841854 cttctctgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2841913
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2841914 gggcgccat 2841922
Score = 97.6 bits (49), Expect = 9e-018
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggcc-------- 618
|||||| |||||||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 2817370 cttgccggcggggagacgcttctccgccttgggcttcttccccgccagggccttctcggc 2817429
Query: 619 -ttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
||||||||||| ||||||||||| || |||||||| || || ||||||||||| |||||
Sbjct: 2817430 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 2817489
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2817490 gggcgccat 2817498
Score = 97.6 bits (49), Expect = 9e-018
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggc--------- 617
|||||| |||||||| |||||||| |||||||||||||||||||| | |||
Sbjct: 2683732 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2683673
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
||||||||| || ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2683672 cttctccgctgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2683613
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2683612 gggcgccat 2683604
Score = 65.9 bits (33), Expect = 3e-008
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 394 agcttctcgaagatgtcgttgatgaaggagttcatgatggacatggcct 442
||||||||||| | ||||||||||||||| |||||||| ||||||||||
Sbjct: 31022797 agcttctcgaaaacgtcgttgatgaaggatttcatgatagacatggcct 31022845
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 658 gcgggcttcttctcggccttgggcgccat 686
|||||||||||||| ||||||||||||||
Sbjct: 36088493 gcgggcttcttctccgccttgggcgccat 36088521
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 472 tgcttcagcaccttgaagatgtagatcttgtac 504
|||||| ||||||||||||||| ||||||||||
Sbjct: 30557189 tgcttctgcaccttgaagatgttgatcttgtac 30557157
Score = 46.1 bits (23), Expect = 0.028
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 582 ccgcttctcagccttgggcttcttccccgcc 612
||||||||| ||||||||||||||| |||||
Sbjct: 36088438 ccgcttctcggccttgggcttcttctccgcc 36088468
Score = 46.1 bits (23), Expect = 0.028
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 580 agccgcttctcagccttgggcttcttc 606
||||||||||| |||||||||||||||
Sbjct: 17500782 agccgcttctccgccttgggcttcttc 17500808
Score = 44.1 bits (22), Expect = 0.11
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 661 ggcttcttctcggccttgggcgccat 686
||||||||||| ||||||||||||||
Sbjct: 17500815 ggcttcttctctgccttgggcgccat 17500840
Score = 44.1 bits (22), Expect = 0.11
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 478 agcaccttgaagatgtagatcttgta 503
|||||||||||||| |||||||||||
Sbjct: 12267585 agcaccttgaagatatagatcttgta 12267560
Score = 42.1 bits (21), Expect = 0.44
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 397 ttctcgaagatgtcgttgatgaaggagtt 425
|||| |||||||||||||||||| |||||
Sbjct: 78061 ttcttgaagatgtcgttgatgaatgagtt 78089
>ref|NM_184409.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 468
Score = 377 bits (190), Expect = e-102
Identities = 265/290 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| || || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 458 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 399
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 398 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 339
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 338 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 279
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 278 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 219
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccc 536
||||||||||||||||| ||||| || |||||| ||||||||| ||||
Sbjct: 218 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 169
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| ||||||||||||||||| ||||||||||||||||| |||| | ||
Sbjct: 129 cttgccggcggggagccgcttctccgccttgggcttcttcccggccggggccttctcggc 70
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 69 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 10
Query: 678 gggcgccat 686
|||||||||
Sbjct: 9 gggcgccat 1
>ref|NT_036312.3| Oryza sativa (japonica cultivar-group)
Length = 10050053
Score = 377 bits (190), Expect = e-102
Identities = 265/290 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| || || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2869447 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 2869388
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 2869387 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2869328
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 2869327 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 2869268
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 2869267 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2869208
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccc 536
||||||||||||||||| ||||| || |||||| ||||||||| ||||
Sbjct: 2869207 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 2869158
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2671732 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2671673
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 2671672 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2671613
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| | |||| | || |||||||||||||||||||||||||||||||||
Sbjct: 2671612 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 2671553
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| || || ||||| |||||||| |||||||||
Sbjct: 2671552 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 2671493
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttc 531
||||||||||||||||| ||||| || |||||| |||||||||
Sbjct: 2671492 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2671448
Score = 373 bits (188), Expect = e-100
Identities = 245/264 (92%)
Strand = Plus / Plus
Query: 246 agtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccggg 305
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2854409 agtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccggg 2854468
Query: 306 gaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgta 365
||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 2854469 gaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgta 2854528
Query: 366 ccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagtt 425
|| || |||||||| ||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 2854529 gcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagtt 2854588
Query: 426 catgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcacctt 485
||||||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||
Sbjct: 2854589 catgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcacctt 2854648
Query: 486 gaagatgtagatcttgtacgtctc 509
|||||||||||||||||| |||||
Sbjct: 2854649 gaagatgtagatcttgtaggtctc 2854672
Score = 367 bits (185), Expect = 6e-099
Identities = 260/285 (91%)
Strand = Plus / Plus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2817047 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2817106
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 2817107 aggacgaggcggacggaggtctggatctcccgtgaggtgatggtgggcttcttgttgtag 2817166
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| | |||| | || |||||||||||||||||||||||||||||||||
Sbjct: 2817167 cgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 2817226
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 2817227 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2817286
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttc 531
||||||||||||||||| ||||| || |||||| |||||||||
Sbjct: 2817287 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2817331
Score = 359 bits (181), Expect = 1e-096
Identities = 268/297 (90%)
Strand = Plus / Plus
Query: 235 gcctaggagctagtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcg 294
||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 2834846 gcctaggaggaagtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcg 2834905
Query: 295 agctcgccggggaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggc 354
|||||||||||||||||||||||||||| |||||||||||| ||||| |||||||| |||
Sbjct: 2834906 agctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggc 2834965
Query: 355 ttcttgttgtaccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttg 414
||||||||||| ||||| |||||||| | ||| | || |||||||||||||| || |||
Sbjct: 2834966 ttcttgttgtagcgcgcgagcttggcggactctccggcgagcttctcgaagatatcattg 2835025
Query: 415 atgaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgc 474
|||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 2835026 atgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgc 2835085
Query: 475 ttcagcaccttgaagatgtagatcttgtacgtctccaccgacttctttgccttcttc 531
|| |||||||||||||||||||||||||| ||||| || |||||| |||||||||
Sbjct: 2835086 ttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2835142
Score = 357 bits (180), Expect = 6e-096
Identities = 240/260 (92%)
Strand = Plus / Plus
Query: 250 aacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccggggagg 309
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2841474 aacttggtgacggccttcgtgccctcggagacggcgtgcttggcgagctcgccggggagg 2841533
Query: 310 acgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtaccgc 369
|||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||| ||
Sbjct: 2841534 acgaggcggacggaggtctgaatctcccgggaggtgatggtgggcttcttgttgtagcgg 2841593
Query: 370 gccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttcatg 429
|| |||||||| | |||| | || ||||||||||||||||||||||||||||||||||||
Sbjct: 2841594 gcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttcatg 2841653
Query: 430 atggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttgaag 489
||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||||||
Sbjct: 2841654 atggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttgaag 2841713
Query: 490 atgtagatcttgtacgtctc 509
|||||||||||||| |||||
Sbjct: 2841714 atgtagatcttgtaggtctc 2841733
Score = 347 bits (175), Expect = 6e-093
Identities = 262/291 (90%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||| || |||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2684055 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 2683996
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 2683995 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 2683936
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| | ||| | || ||||||||||||||||| |||||||||||||||
Sbjct: 2683935 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 2683876
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 2683875 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 2683816
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttcccc 537
||||||||||||||||| ||||| || |||||| ||||||||| |||||
Sbjct: 2683815 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctcccc 2683765
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| ||||||||||||||||| ||||||||||||||||| |||| | ||
Sbjct: 2869118 cttgccggcggggagccgcttctccgccttgggcttcttcccggccggggccttctcggc 2869059
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2869058 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2868999
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2868998 gggcgccat 2868990
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| |||||||| |||||||| |||||||||||||||||||||| | ||
Sbjct: 2854733 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 2854792
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2854793 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2854852
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2854853 gggcgccat 2854861
Score = 105 bits (53), Expect = 4e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| |||||||| |||||||| |||||||||||||||||||||| | ||
Sbjct: 2835181 cttgccggcggggaggcgcttctccgccttgggcttcttccccgccggggccttctcggc 2835240
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| || || ||||||||||| |||||
Sbjct: 2835241 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 2835300
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2835301 gggcgccat 2835309
Score = 105 bits (53), Expect = 4e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggc--------- 617
|||||| |||||||| |||||||| |||||||||||||||||||| | |||
Sbjct: 2671409 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2671350
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2671349 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgcctt 2671290
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2671289 gggcgccat 2671281
Score = 97.6 bits (49), Expect = 9e-018
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggccttctccg- 625
|||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||| |
Sbjct: 2841794 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2841853
Query: 626 --------ccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2841854 cttctctgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2841913
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2841914 gggcgccat 2841922
Score = 97.6 bits (49), Expect = 9e-018
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggcc-------- 618
|||||| |||||||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 2817370 cttgccggcggggagacgcttctccgccttgggcttcttccccgccagggccttctcggc 2817429
Query: 619 -ttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
||||||||||| ||||||||||| || |||||||| || || ||||||||||| |||||
Sbjct: 2817430 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 2817489
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2817490 gggcgccat 2817498
Score = 97.6 bits (49), Expect = 9e-018
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggc--------- 617
|||||| |||||||| |||||||| |||||||||||||||||||| | |||
Sbjct: 2683732 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2683673
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
||||||||| || ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2683672 cttctccgctgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2683613
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2683612 gggcgccat 2683604
Score = 42.1 bits (21), Expect = 0.44
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 397 ttctcgaagatgtcgttgatgaaggagtt 425
|||| |||||||||||||||||| |||||
Sbjct: 78061 ttcttgaagatgtcgttgatgaatgagtt 78089
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 377 bits (190), Expect = e-102
Identities = 265/290 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| || || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2929384 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 2929325
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 2929324 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2929265
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 2929264 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 2929205
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 2929204 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2929145
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccc 536
||||||||||||||||| ||||| || |||||| ||||||||| ||||
Sbjct: 2929144 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 2929095
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2730986 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2730927
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 2730926 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2730867
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| | |||| | || |||||||||||||||||||||||||||||||||
Sbjct: 2730866 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 2730807
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| || || ||||| |||||||| |||||||||
Sbjct: 2730806 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 2730747
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttc 531
||||||||||||||||| ||||| || |||||| |||||||||
Sbjct: 2730746 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2730702
Score = 373 bits (188), Expect = e-100
Identities = 245/264 (92%)
Strand = Plus / Plus
Query: 246 agtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccggg 305
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2914346 agtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccggg 2914405
Query: 306 gaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgta 365
||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 2914406 gaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgta 2914465
Query: 366 ccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagtt 425
|| || |||||||| ||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 2914466 gcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagtt 2914525
Query: 426 catgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcacctt 485
||||||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||
Sbjct: 2914526 catgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcacctt 2914585
Query: 486 gaagatgtagatcttgtacgtctc 509
|||||||||||||||||| |||||
Sbjct: 2914586 gaagatgtagatcttgtaggtctc 2914609
Score = 367 bits (185), Expect = 6e-099
Identities = 260/285 (91%)
Strand = Plus / Plus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2874200 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2874259
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 2874260 aggacgaggcggacggaggtctggatctcccgtgaggtgatggtgggcttcttgttgtag 2874319
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| | |||| | || |||||||||||||||||||||||||||||||||
Sbjct: 2874320 cgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 2874379
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 2874380 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2874439
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttc 531
||||||||||||||||| ||||| || |||||| |||||||||
Sbjct: 2874440 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2874484
Score = 359 bits (181), Expect = 1e-096
Identities = 268/297 (90%)
Strand = Plus / Plus
Query: 235 gcctaggagctagtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcg 294
||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 2894836 gcctaggaggaagtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcg 2894895
Query: 295 agctcgccggggaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggc 354
|||||||||||||||||||||||||||| |||||||||||| ||||| |||||||| |||
Sbjct: 2894896 agctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggc 2894955
Query: 355 ttcttgttgtaccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttg 414
||||||||||| ||||| |||||||| | ||| | || |||||||||||||| || |||
Sbjct: 2894956 ttcttgttgtagcgcgcgagcttggcggactctccggcgagcttctcgaagatatcattg 2895015
Query: 415 atgaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgc 474
|||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 2895016 atgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgc 2895075
Query: 475 ttcagcaccttgaagatgtagatcttgtacgtctccaccgacttctttgccttcttc 531
|| |||||||||||||||||||||||||| ||||| || |||||| |||||||||
Sbjct: 2895076 ttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2895132
Score = 347 bits (175), Expect = 6e-093
Identities = 262/291 (90%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||| || |||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2743495 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 2743436
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 2743435 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 2743376
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| | ||| | || ||||||||||||||||| |||||||||||||||
Sbjct: 2743375 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 2743316
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 2743315 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 2743256
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttcccc 537
||||||||||||||||| ||||| || |||||| ||||||||| |||||
Sbjct: 2743255 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctcccc 2743205
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| ||||||||||||||||| ||||||||||||||||| |||| | ||
Sbjct: 2929055 cttgccggcggggagccgcttctccgccttgggcttcttcccggccggggccttctcggc 2928996
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2928995 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2928936
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2928935 gggcgccat 2928927
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| |||||||| |||||||| |||||||||||||||||||||| | ||
Sbjct: 2914670 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 2914729
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2914730 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2914789
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2914790 gggcgccat 2914798
Score = 105 bits (53), Expect = 4e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| |||||||| |||||||| |||||||||||||||||||||| | ||
Sbjct: 2895171 cttgccggcggggaggcgcttctccgccttgggcttcttccccgccggggccttctcggc 2895230
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| || || ||||||||||| |||||
Sbjct: 2895231 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 2895290
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2895291 gggcgccat 2895299
Score = 105 bits (53), Expect = 4e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggc--------- 617
|||||| |||||||| |||||||| |||||||||||||||||||| | |||
Sbjct: 2730663 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2730604
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2730603 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgcctt 2730544
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2730543 gggcgccat 2730535
Score = 97.6 bits (49), Expect = 9e-018
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggccttctccg- 625
|||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||| |
Sbjct: 2901728 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2901787
Query: 626 --------ccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2901788 cttctctgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2901847
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2901848 gggcgccat 2901856
Score = 97.6 bits (49), Expect = 9e-018
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggcc-------- 618
|||||| |||||||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 2874523 cttgccggcggggagacgcttctccgccttgggcttcttccccgccagggccttctcggc 2874582
Query: 619 -ttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
||||||||||| ||||||||||| || |||||||| || || ||||||||||| |||||
Sbjct: 2874583 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 2874642
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2874643 gggcgccat 2874651
Score = 97.6 bits (49), Expect = 9e-018
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggc--------- 617
|||||| |||||||| |||||||| |||||||||||||||||||| | |||
Sbjct: 2743172 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2743113
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
||||||||| || ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2743112 cttctccgctgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2743053
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2743052 gggcgccat 2743044
Score = 85.7 bits (43), Expect = 3e-014
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 250 aacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcg 300
|||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 2901465 aacttggtgacggccttcgtgccctcggagacggcgtgcttggcgagctcg 2901515
Score = 61.9 bits (31), Expect = 5e-007
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 471 ctgcttcagcaccttgaagatgtagatcttgtacgtctc 509
|||||| |||||||||||||||||||||||||| |||||
Sbjct: 2901629 ctgcttgagcaccttgaagatgtagatcttgtaggtctc 2901667
Score = 42.1 bits (21), Expect = 0.44
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 397 ttctcgaagatgtcgttgatgaaggagtt 425
|||| |||||||||||||||||| |||||
Sbjct: 75413 ttcttgaagatgtcgttgatgaatgagtt 75441
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 377 bits (190), Expect = e-102
Identities = 265/290 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| || || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2929384 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 2929325
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 2929324 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2929265
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 2929264 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 2929205
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 2929204 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2929145
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccc 536
||||||||||||||||| ||||| || |||||| ||||||||| ||||
Sbjct: 2929144 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 2929095
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2730986 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2730927
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 2730926 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2730867
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| | |||| | || |||||||||||||||||||||||||||||||||
Sbjct: 2730866 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 2730807
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| || || ||||| |||||||| |||||||||
Sbjct: 2730806 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 2730747
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttc 531
||||||||||||||||| ||||| || |||||| |||||||||
Sbjct: 2730746 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2730702
Score = 373 bits (188), Expect = e-100
Identities = 245/264 (92%)
Strand = Plus / Plus
Query: 246 agtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccggg 305
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2914346 agtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccggg 2914405
Query: 306 gaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgta 365
||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 2914406 gaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgta 2914465
Query: 366 ccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagtt 425
|| || |||||||| ||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 2914466 gcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagtt 2914525
Query: 426 catgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcacctt 485
||||||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||
Sbjct: 2914526 catgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcacctt 2914585
Query: 486 gaagatgtagatcttgtacgtctc 509
|||||||||||||||||| |||||
Sbjct: 2914586 gaagatgtagatcttgtaggtctc 2914609
Score = 367 bits (185), Expect = 6e-099
Identities = 260/285 (91%)
Strand = Plus / Plus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2874200 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2874259
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 2874260 aggacgaggcggacggaggtctggatctcccgtgaggtgatggtgggcttcttgttgtag 2874319
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| | |||| | || |||||||||||||||||||||||||||||||||
Sbjct: 2874320 cgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 2874379
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 2874380 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2874439
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttc 531
||||||||||||||||| ||||| || |||||| |||||||||
Sbjct: 2874440 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2874484
Score = 359 bits (181), Expect = 1e-096
Identities = 268/297 (90%)
Strand = Plus / Plus
Query: 235 gcctaggagctagtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcg 294
||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 2894836 gcctaggaggaagtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcg 2894895
Query: 295 agctcgccggggaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggc 354
|||||||||||||||||||||||||||| |||||||||||| ||||| |||||||| |||
Sbjct: 2894896 agctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggc 2894955
Query: 355 ttcttgttgtaccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttg 414
||||||||||| ||||| |||||||| | ||| | || |||||||||||||| || |||
Sbjct: 2894956 ttcttgttgtagcgcgcgagcttggcggactctccggcgagcttctcgaagatatcattg 2895015
Query: 415 atgaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgc 474
|||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 2895016 atgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgc 2895075
Query: 475 ttcagcaccttgaagatgtagatcttgtacgtctccaccgacttctttgccttcttc 531
|| |||||||||||||||||||||||||| ||||| || |||||| |||||||||
Sbjct: 2895076 ttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2895132
Score = 347 bits (175), Expect = 6e-093
Identities = 262/291 (90%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||| || |||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2743495 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 2743436
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 2743435 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 2743376
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| | ||| | || ||||||||||||||||| |||||||||||||||
Sbjct: 2743375 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 2743316
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 2743315 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 2743256
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttcccc 537
||||||||||||||||| ||||| || |||||| ||||||||| |||||
Sbjct: 2743255 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctcccc 2743205
Score = 343 bits (173), Expect = 9e-092
Identities = 233/253 (92%)
Strand = Plus / Plus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17079155 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 17079214
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
|||||||||||||||||||||| |||||||||||| ||| | | ||||||||||||||
Sbjct: 17079215 aggacgaggcggacggaggtctagatctcgcgggaggtggcgatgggcttcttgttgtag 17079274
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || || | ||| |||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 17079275 cgggcgaggtgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttc 17079334
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||| |||||||||||||| |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 17079335 atgatcgacatggccttggaggagatgccgatgtccgggtgcacctgcttcaggaccttg 17079394
Query: 487 aagatgtagatct 499
|||||||||||||
Sbjct: 17079395 aagatgtagatct 17079407
Score = 305 bits (154), Expect = 2e-080
Identities = 265/302 (87%)
Strand = Plus / Plus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 35483380 gtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 35483439
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 35483440 aggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtcggcttcttgttgtag 35483499
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || || ||| |||||| || |||||||||||||| ||||||||||| ||||||
Sbjct: 35483500 cgggcgagacgggcggcctcctgggcgagcttctcgaagatatcgttgatgaacgagttc 35483559
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||| ||||||||||||||||| || || || || || ||||||||||| || ||||||
Sbjct: 35483560 atgatcgacatggccttggacgatatcccgatatcgggatgcacctgcttgaggaccttg 35483619
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
|| ||||||||||| || || || || |||||| ||||||||||||||||||||||||
Sbjct: 35483620 aaaatgtagatcttataagtttcgacgctcttcttggccttcttcttccccttcttctcg 35483679
Query: 547 cc 548
||
Sbjct: 35483680 cc 35483681
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| ||||||||||||||||| ||||||||||||||||| |||| | ||
Sbjct: 2929055 cttgccggcggggagccgcttctccgccttgggcttcttcccggccggggccttctcggc 2928996
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2928995 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2928936
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2928935 gggcgccat 2928927
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| |||||||| |||||||| |||||||||||||||||||||| | ||
Sbjct: 2914670 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 2914729
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2914730 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2914789
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2914790 gggcgccat 2914798
Score = 105 bits (53), Expect = 4e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| |||||||| |||||||| |||||||||||||||||||||| | ||
Sbjct: 2895171 cttgccggcggggaggcgcttctccgccttgggcttcttccccgccggggccttctcggc 2895230
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| || || ||||||||||| |||||
Sbjct: 2895231 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 2895290
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2895291 gggcgccat 2895299
Score = 105 bits (53), Expect = 4e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggc--------- 617
|||||| |||||||| |||||||| |||||||||||||||||||| | |||
Sbjct: 2730663 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2730604
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2730603 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgcctt 2730544
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2730543 gggcgccat 2730535
Score = 97.6 bits (49), Expect = 9e-018
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggccttctccg- 625
|||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||| |
Sbjct: 2901728 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2901787
Query: 626 --------ccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2901788 cttctctgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2901847
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2901848 gggcgccat 2901856
Score = 97.6 bits (49), Expect = 9e-018
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggcc-------- 618
|||||| |||||||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 2874523 cttgccggcggggagacgcttctccgccttgggcttcttccccgccagggccttctcggc 2874582
Query: 619 -ttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
||||||||||| ||||||||||| || |||||||| || || ||||||||||| |||||
Sbjct: 2874583 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 2874642
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2874643 gggcgccat 2874651
Score = 97.6 bits (49), Expect = 9e-018
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggc--------- 617
|||||| |||||||| |||||||| |||||||||||||||||||| | |||
Sbjct: 2743172 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2743113
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
||||||||| || ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2743112 cttctccgctgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2743053
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2743052 gggcgccat 2743044
Score = 85.7 bits (43), Expect = 3e-014
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 250 aacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcg 300
|||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 2901465 aacttggtgacggccttcgtgccctcggagacggcgtgcttggcgagctcg 2901515
Score = 65.9 bits (33), Expect = 3e-008
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 394 agcttctcgaagatgtcgttgatgaaggagttcatgatggacatggcct 442
||||||||||| | ||||||||||||||| |||||||| ||||||||||
Sbjct: 30573944 agcttctcgaaaacgtcgttgatgaaggatttcatgatagacatggcct 30573992
Score = 61.9 bits (31), Expect = 5e-007
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 471 ctgcttcagcaccttgaagatgtagatcttgtacgtctc 509
|||||| |||||||||||||||||||||||||| |||||
Sbjct: 2901629 ctgcttgagcaccttgaagatgtagatcttgtaggtctc 2901667
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 658 gcgggcttcttctcggccttgggcgccat 686
|||||||||||||| ||||||||||||||
Sbjct: 35483761 gcgggcttcttctccgccttgggcgccat 35483789
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 472 tgcttcagcaccttgaagatgtagatcttgtac 504
|||||| ||||||||||||||| ||||||||||
Sbjct: 30140117 tgcttctgcaccttgaagatgttgatcttgtac 30140085
Score = 46.1 bits (23), Expect = 0.028
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 582 ccgcttctcagccttgggcttcttccccgcc 612
||||||||| ||||||||||||||| |||||
Sbjct: 35483706 ccgcttctcggccttgggcttcttctccgcc 35483736
Score = 46.1 bits (23), Expect = 0.028
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 580 agccgcttctcagccttgggcttcttc 606
||||||||||| |||||||||||||||
Sbjct: 17079485 agccgcttctccgccttgggcttcttc 17079511
Score = 44.1 bits (22), Expect = 0.11
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 661 ggcttcttctcggccttgggcgccat 686
||||||||||| ||||||||||||||
Sbjct: 17079518 ggcttcttctctgccttgggcgccat 17079543
Score = 44.1 bits (22), Expect = 0.11
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 478 agcaccttgaagatgtagatcttgta 503
|||||||||||||| |||||||||||
Sbjct: 12266809 agcaccttgaagatatagatcttgta 12266784
Score = 42.1 bits (21), Expect = 0.44
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 397 ttctcgaagatgtcgttgatgaaggagtt 425
|||| |||||||||||||||||| |||||
Sbjct: 75413 ttcttgaagatgtcgttgatgaatgagtt 75441
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 377 bits (190), Expect = e-102
Identities = 265/290 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| || || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2871645 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 2871586
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 2871585 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2871526
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 2871525 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 2871466
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 2871465 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2871406
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccc 536
||||||||||||||||| ||||| || |||||| ||||||||| ||||
Sbjct: 2871405 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctccc 2871356
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2673930 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2673871
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 2673870 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2673811
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| | |||| | || |||||||||||||||||||||||||||||||||
Sbjct: 2673810 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 2673751
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| || || ||||| |||||||| |||||||||
Sbjct: 2673750 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 2673691
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttc 531
||||||||||||||||| ||||| || |||||| |||||||||
Sbjct: 2673690 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2673646
Score = 373 bits (188), Expect = e-100
Identities = 245/264 (92%)
Strand = Plus / Plus
Query: 246 agtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccggg 305
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2856607 agtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccggg 2856666
Query: 306 gaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgta 365
||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 2856667 gaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgta 2856726
Query: 366 ccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagtt 425
|| || |||||||| ||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 2856727 gcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagtt 2856786
Query: 426 catgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcacctt 485
||||||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||
Sbjct: 2856787 catgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcacctt 2856846
Query: 486 gaagatgtagatcttgtacgtctc 509
|||||||||||||||||| |||||
Sbjct: 2856847 gaagatgtagatcttgtaggtctc 2856870
Score = 367 bits (185), Expect = 6e-099
Identities = 260/285 (91%)
Strand = Plus / Plus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| || || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2819245 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2819304
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||| || || |||||||| ||||||||||||||
Sbjct: 2819305 aggacgaggcggacggaggtctggatctcccgtgaggtgatggtgggcttcttgttgtag 2819364
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
||||| |||||||| | |||| | || |||||||||||||||||||||||||||||||||
Sbjct: 2819365 cgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 2819424
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 2819425 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2819484
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttc 531
||||||||||||||||| ||||| || |||||| |||||||||
Sbjct: 2819485 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2819529
Score = 359 bits (181), Expect = 1e-096
Identities = 268/297 (90%)
Strand = Plus / Plus
Query: 235 gcctaggagctagtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcg 294
||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 2837044 gcctaggaggaagtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcg 2837103
Query: 295 agctcgccggggaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggc 354
|||||||||||||||||||||||||||| |||||||||||| ||||| |||||||| |||
Sbjct: 2837104 agctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggc 2837163
Query: 355 ttcttgttgtaccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttg 414
||||||||||| ||||| |||||||| | ||| | || |||||||||||||| || |||
Sbjct: 2837164 ttcttgttgtagcgcgcgagcttggcggactctccggcgagcttctcgaagatatcattg 2837223
Query: 415 atgaaggagttcatgatggacatggccttggacgagatgccaatgtccgggtgcacctgc 474
|||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 2837224 atgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgc 2837283
Query: 475 ttcagcaccttgaagatgtagatcttgtacgtctccaccgacttctttgccttcttc 531
|| |||||||||||||||||||||||||| ||||| || |||||| |||||||||
Sbjct: 2837284 ttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2837340
Score = 357 bits (180), Expect = 6e-096
Identities = 240/260 (92%)
Strand = Plus / Plus
Query: 250 aacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccggggagg 309
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2843672 aacttggtgacggccttcgtgccctcggagacggcgtgcttggcgagctcgccggggagg 2843731
Query: 310 acgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtaccgc 369
|||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||| ||
Sbjct: 2843732 acgaggcggacggaggtctgaatctcccgggaggtgatggtgggcttcttgttgtagcgg 2843791
Query: 370 gccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttcatg 429
|| |||||||| | |||| | || ||||||||||||||||||||||||||||||||||||
Sbjct: 2843792 gcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttcatg 2843851
Query: 430 atggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttgaag 489
||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||||||
Sbjct: 2843852 atggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttgaag 2843911
Query: 490 atgtagatcttgtacgtctc 509
|||||||||||||| |||||
Sbjct: 2843912 atgtagatcttgtaggtctc 2843931
Score = 347 bits (175), Expect = 6e-093
Identities = 262/291 (90%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||| || |||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2686253 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 2686194
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 2686193 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 2686134
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| | ||| | || ||||||||||||||||| |||||||||||||||
Sbjct: 2686133 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 2686074
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 2686073 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 2686014
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttcccc 537
||||||||||||||||| ||||| || |||||| ||||||||| |||||
Sbjct: 2686013 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctcccc 2685963
Score = 343 bits (173), Expect = 9e-092
Identities = 233/253 (92%)
Strand = Plus / Plus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17421735 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 17421794
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
|||||||||||||||||||||| |||||||||||| ||| | | ||||||||||||||
Sbjct: 17421795 aggacgaggcggacggaggtctagatctcgcgggaggtggcgatgggcttcttgttgtag 17421854
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || || | ||| |||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 17421855 cgggcgaggtgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttc 17421914
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||| |||||||||||||| |||||||| ||||||||||||||||||||||| ||||||
Sbjct: 17421915 atgatcgacatggccttggaggagatgccgatgtccgggtgcacctgcttcaggaccttg 17421974
Query: 487 aagatgtagatct 499
|||||||||||||
Sbjct: 17421975 aagatgtagatct 17421987
Score = 305 bits (154), Expect = 2e-080
Identities = 265/302 (87%)
Strand = Plus / Plus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 36007442 gtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 36007501
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 36007502 aggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtcggcttcttgttgtag 36007561
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || || ||| |||||| || |||||||||||||| ||||||||||| ||||||
Sbjct: 36007562 cgggcgagacgggcggcctcctgggcgagcttctcgaagatatcgttgatgaacgagttc 36007621
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||| ||||||||||||||||| || || || || || ||||||||||| || ||||||
Sbjct: 36007622 atgatcgacatggccttggacgatatcccgatatcgggatgcacctgcttgaggaccttg 36007681
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttcttctcg 546
|| ||||||||||| || || || || |||||| ||||||||||||||||||||||||
Sbjct: 36007682 aaaatgtagatcttataagtttcgacgctcttcttggccttcttcttccccttcttctcg 36007741
Query: 547 cc 548
||
Sbjct: 36007742 cc 36007743
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| ||||||||||||||||| ||||||||||||||||| |||| | ||
Sbjct: 2871316 cttgccggcggggagccgcttctccgccttgggcttcttcccggccggggccttctcggc 2871257
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2871256 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2871197
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2871196 gggcgccat 2871188
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| |||||||| |||||||| |||||||||||||||||||||| | ||
Sbjct: 2856931 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 2856990
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2856991 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2857050
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2857051 gggcgccat 2857059
Score = 105 bits (53), Expect = 4e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| |||||||| |||||||| |||||||||||||||||||||| | ||
Sbjct: 2837379 cttgccggcggggaggcgcttctccgccttgggcttcttccccgccggggccttctcggc 2837438
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| || || ||||||||||| |||||
Sbjct: 2837439 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 2837498
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2837499 gggcgccat 2837507
Score = 105 bits (53), Expect = 4e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggc--------- 617
|||||| |||||||| |||||||| |||||||||||||||||||| | |||
Sbjct: 2673607 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2673548
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2673547 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgcctt 2673488
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2673487 gggcgccat 2673479
Score = 97.6 bits (49), Expect = 9e-018
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggccttctccg- 625
|||||| |||||||| |||||||| |||||||||||||||||||| | ||||||||| |
Sbjct: 2843992 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2844051
Query: 626 --------ccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2844052 cttctctgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2844111
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2844112 gggcgccat 2844120
Score = 97.6 bits (49), Expect = 9e-018
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggcc-------- 618
|||||| |||||||| |||||||| ||||||||||||||||||||| ||||
Sbjct: 2819568 cttgccggcggggagacgcttctccgccttgggcttcttccccgccagggccttctcggc 2819627
Query: 619 -ttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
||||||||||| ||||||||||| || |||||||| || || ||||||||||| |||||
Sbjct: 2819628 cttctccgccgcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgcctt 2819687
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2819688 gggcgccat 2819696
Score = 97.6 bits (49), Expect = 9e-018
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggc--------- 617
|||||| |||||||| |||||||| |||||||||||||||||||| | |||
Sbjct: 2685930 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 2685871
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
||||||||| || ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 2685870 cttctccgctgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 2685811
Query: 678 gggcgccat 686
|||||||||
Sbjct: 2685810 gggcgccat 2685802
Score = 65.9 bits (33), Expect = 3e-008
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 394 agcttctcgaagatgtcgttgatgaaggagttcatgatggacatggcct 442
||||||||||| | ||||||||||||||| |||||||| ||||||||||
Sbjct: 30942127 agcttctcgaaaacgtcgttgatgaaggatttcatgatagacatggcct 30942175
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 658 gcgggcttcttctcggccttgggcgccat 686
|||||||||||||| ||||||||||||||
Sbjct: 36007823 gcgggcttcttctccgccttgggcgccat 36007851
Score = 50.1 bits (25), Expect = 0.002
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 472 tgcttcagcaccttgaagatgtagatcttgtac 504
|||||| ||||||||||||||| ||||||||||
Sbjct: 30476519 tgcttctgcaccttgaagatgttgatcttgtac 30476487
Score = 46.1 bits (23), Expect = 0.028
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 582 ccgcttctcagccttgggcttcttccccgcc 612
||||||||| ||||||||||||||| |||||
Sbjct: 36007768 ccgcttctcggccttgggcttcttctccgcc 36007798
Score = 46.1 bits (23), Expect = 0.028
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 580 agccgcttctcagccttgggcttcttc 606
||||||||||| |||||||||||||||
Sbjct: 17422065 agccgcttctccgccttgggcttcttc 17422091
Score = 44.1 bits (22), Expect = 0.11
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 661 ggcttcttctcggccttgggcgccat 686
||||||||||| ||||||||||||||
Sbjct: 17422098 ggcttcttctctgccttgggcgccat 17422123
Score = 44.1 bits (22), Expect = 0.11
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 478 agcaccttgaagatgtagatcttgta 503
|||||||||||||| |||||||||||
Sbjct: 12269803 agcaccttgaagatatagatcttgta 12269778
Score = 42.1 bits (21), Expect = 0.44
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 397 ttctcgaagatgtcgttgatgaaggagtt 425
|||| |||||||||||||||||| |||||
Sbjct: 80259 ttcttgaagatgtcgttgatgaatgagtt 80287
>gb|CA755827.1|CA755827 BR030029000_PLATE_B12_90_096.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030029000_PLATE_B12_90_096.ab1 similar to putative
histone H2B [Oryza sativa (japonica cultivar-group)],
mRNA sequence
Length = 636
Score = 375 bits (189), Expect = e-101
Identities = 246/266 (92%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 490 gtgaacttggtgacggccttggtgccctcggagacggcgtgctnggcgagctcgccgggg 431
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 430 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 371
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||| ||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 370 cgggcgagctnggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 311
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| || ||||||
Sbjct: 310 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 251
Query: 487 aagatgtagatcttgtacgtctccac 512
||||||||||||| ||| ||||||||
Sbjct: 250 aagatgtagatctngtaggtctccac 225
Score = 137 bits (69), Expect = 1e-029
Identities = 107/119 (89%), Gaps = 3/119 (2%)
Strand = Plus / Minus
Query: 571 cccgcggggagccgcttctcagccttgggcttcttccccgccgt---ggccttctccgcc 627
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 160 cccgcggggagccgcttctccgccttgggcttcttccccgccgccggggccttctccgcc 101
Query: 628 gccggctcctcctcggcaggcttcttggcggcgggcttcttctcggccttgggcgccat 686
|| ||||||||||| || |||||||| || || ||||||||||| ||||||||||||||
Sbjct: 100 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 42
>gb|CV730234.1|CV730234 FLO--03-K21.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--03-K21,
mRNA sequence
Length = 531
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 423
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 422 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 363
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| | |||| | || |||||||||||||||||||||||||||||||||
Sbjct: 362 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 303
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| || || ||||| |||||||| |||||||||
Sbjct: 302 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 243
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttc 531
||||||||||||||||| ||||| || |||||| |||||||||
Sbjct: 242 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 198
Score = 87.7 bits (44), Expect = 8e-015
Identities = 100/120 (83%), Gaps = 9/120 (7%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggc--------- 617
|||||| |||||||| |||||||| |||||||||||||||||||| | |||
Sbjct: 159 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 100
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 99 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgcctt 40
>dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0434B04
Length = 167029
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123705 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 123646
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 123645 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 123586
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| | |||| | || |||||||||||||||||||||||||||||||||
Sbjct: 123585 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 123526
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| || || ||||| |||||||| |||||||||
Sbjct: 123525 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 123466
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttc 531
||||||||||||||||| ||||| || |||||| |||||||||
Sbjct: 123465 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 123421
Score = 347 bits (175), Expect = 6e-093
Identities = 262/291 (90%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||| || |||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 136028 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 135969
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 135968 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 135909
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| | ||| | || ||||||||||||||||| |||||||||||||||
Sbjct: 135908 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 135849
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 135848 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 135789
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttcccc 537
||||||||||||||||| ||||| || |||||| ||||||||| |||||
Sbjct: 135788 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttcctcccc 135738
Score = 105 bits (53), Expect = 4e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggc--------- 617
|||||| |||||||| |||||||| |||||||||||||||||||| | |||
Sbjct: 123382 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 123323
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 123322 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgcctt 123263
Query: 678 gggcgccat 686
|||||||||
Sbjct: 123262 gggcgccat 123254
Score = 97.6 bits (49), Expect = 9e-018
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggc--------- 617
|||||| |||||||| |||||||| |||||||||||||||||||| | |||
Sbjct: 135705 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 135646
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
||||||||| || ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 135645 cttctccgctgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 135586
Query: 678 gggcgccat 686
|||||||||
Sbjct: 135585 gggcgccat 135577
>gb|AACV01000194.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000194, whole
genome shotgun sequence
Length = 30874
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19327 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 19268
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 19267 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 19208
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| | |||| | || |||||||||||||||||||||||||||||||||
Sbjct: 19207 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 19148
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| || || ||||| |||||||| |||||||||
Sbjct: 19147 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 19088
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttc 531
||||||||||||||||| ||||| || |||||| |||||||||
Sbjct: 19087 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 19043
Score = 105 bits (53), Expect = 4e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggc--------- 617
|||||| |||||||| |||||||| |||||||||||||||||||| | |||
Sbjct: 19004 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 18945
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 18944 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgcctt 18885
Query: 678 gggcgccat 686
|||||||||
Sbjct: 18884 gggcgccat 18876
>ref|NM_184371.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 462
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 393
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 392 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 333
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| | |||| | || |||||||||||||||||||||||||||||||||
Sbjct: 332 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 273
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| || || ||||| |||||||| |||||||||
Sbjct: 272 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 213
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttc 531
||||||||||||||||| ||||| || |||||| |||||||||
Sbjct: 212 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 168
Score = 105 bits (53), Expect = 4e-020
Identities = 109/129 (84%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggc--------- 617
|||||| |||||||| |||||||| |||||||||||||||||||| | |||
Sbjct: 129 cttgccggcggggagacgcttctccgccttgggcttcttccccgcgggggccttctcggc 70
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 69 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgcctt 10
Query: 678 gggcgccat 686
|||||||||
Sbjct: 9 gggcgccat 1
>gb|AU057603.1|AU057603 AU057603 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S21609_2Z, mRNA sequence
Length = 493
Score = 373 bits (188), Expect = e-100
Identities = 244/263 (92%)
Strand = Plus / Minus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
||||||||||| || || ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 271 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 212
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 211 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 152
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || |||||||| ||||| || || |||||||||||||||||||||||||||||||||
Sbjct: 151 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 92
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
|||||||||||||||||||| |||||||| ||||| ||||| |||||||| |||||||||
Sbjct: 91 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 32
Query: 487 aagatgtagatcttgtacgtctc 509
||||||||||||||||| |||||
Sbjct: 31 aagatgtagatcttgtangtctc 9
>gb|CB662156.1|CB662156 OSJNEd05O18.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05O18 5', mRNA sequence
Length = 702
Score = 373 bits (188), Expect = e-100
Identities = 245/264 (92%)
Strand = Plus / Minus
Query: 246 agtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccggg 305
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 agtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccggg 442
Query: 306 gaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgta 365
||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 441 gaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgta 382
Query: 366 ccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagtt 425
|| || |||||||| ||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 381 gcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagtt 322
Query: 426 catgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcacctt 485
||||||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||
Sbjct: 321 catgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcacctt 262
Query: 486 gaagatgtagatcttgtacgtctc 509
|||||||||||||||||| |||||
Sbjct: 261 gaagatgtagatcttgtaggtctc 238
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| |||||||| |||||||| |||||||||||||||||||||| | ||
Sbjct: 177 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 118
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 117 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 58
Query: 678 gggcgccat 686
|||||||||
Sbjct: 57 gggcgccat 49
>gb|CB662157.1|CB662157 OSJNEd05O18.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05O18 3', mRNA sequence
Length = 827
Score = 373 bits (188), Expect = e-100
Identities = 245/264 (92%)
Strand = Plus / Plus
Query: 246 agtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccggg 305
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 254 agtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccggg 313
Query: 306 gaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgta 365
||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 314 gaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgta 373
Query: 366 ccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagtt 425
|| || |||||||| ||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 374 gcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagtt 433
Query: 426 catgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcacctt 485
||||||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||
Sbjct: 434 catgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcacctt 493
Query: 486 gaagatgtagatcttgtacgtctc 509
|||||||||||||||||| |||||
Sbjct: 494 gaagatgtagatcttgtaggtctc 517
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| |||||||| |||||||| |||||||||||||||||||||| | ||
Sbjct: 578 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 637
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 638 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 697
Query: 678 gggcgccat 686
|||||||||
Sbjct: 698 gggcgccat 706
>gb|CF278594.1|CF278594 14ETL--04-I24.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--04-I24, mRNA sequence
Length = 567
Score = 373 bits (188), Expect = e-100
Identities = 245/264 (92%)
Strand = Plus / Minus
Query: 246 agtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccggg 305
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 526 agtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccggg 467
Query: 306 gaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgta 365
||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 466 gaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgta 407
Query: 366 ccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagtt 425
|| || |||||||| ||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 406 gcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagtt 347
Query: 426 catgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcacctt 485
||||||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||
Sbjct: 346 catgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcacctt 287
Query: 486 gaagatgtagatcttgtacgtctc 509
|||||||||||||||||| |||||
Sbjct: 286 gaagatgtagatcttgtaggtctc 263
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| |||||||| |||||||| |||||||||||||||||||||| | ||
Sbjct: 202 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 143
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 142 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 83
Query: 678 gggcgccat 686
|||||||||
Sbjct: 82 gggcgccat 74
>gb|CF279531.1|CF279531 14ETL--05-N20.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--05-N20, mRNA sequence
Length = 554
Score = 373 bits (188), Expect = e-100
Identities = 269/296 (90%)
Strand = Plus / Plus
Query: 247 gtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccgggg 306
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 gtgaacttggtgaccgccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 229
Query: 307 aggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgtac 366
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 230 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 289
Query: 367 cgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagttc 426
|| || || ||| |||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 290 cgggcgaggcgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttc 349
Query: 427 atgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcaccttg 486
||||| |||||||||||||| ||||| || ||||||||||||||||||||||| ||||||
Sbjct: 350 atgatcgacatggccttggaggagattccgatgtccgggtgcacctgcttcaggaccttg 409
Query: 487 aagatgtagatcttgtacgtctccaccgacttctttgccttcttcttccccttctt 542
|||||||| |||||||| ||||| || |||||| ||||||||| ||||||||||
Sbjct: 410 aagatgtaaatcttgtaggtctcgacgctcttcttcgccttcttcctccccttctt 465
Score = 67.9 bits (34), Expect = 8e-009
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 580 agccgcttctcagccttgggcttcttccccgccgtggccttctccg 625
||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct: 509 agccgcttctccgccttgggcttcttccccgccggcgccttctccg 554
>gb|CF291163.1|CF291163 14ROOT--01-H18.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-H18, mRNA sequence
Length = 532
Score = 373 bits (188), Expect = e-100
Identities = 245/264 (92%)
Strand = Plus / Minus
Query: 246 agtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccggg 305
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 527 agtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccggg 468
Query: 306 gaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgta 365
||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 467 gaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgta 408
Query: 366 ccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagtt 425
|| || |||||||| ||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 407 gcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagtt 348
Query: 426 catgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcacctt 485
||||||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||
Sbjct: 347 catgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcacctt 288
Query: 486 gaagatgtagatcttgtacgtctc 509
|||||||||||||||||| |||||
Sbjct: 287 gaagatgtagatcttgtaagtctc 264
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| |||||||| |||||||| |||||||||||||||||||||| | ||
Sbjct: 203 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 144
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 143 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 84
Query: 678 gggcgccat 686
|||||||||
Sbjct: 83 gggcgccat 75
>gb|CF291164.1|CF291164 14ROOT--01-H18.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-H18, mRNA sequence
Length = 594
Score = 373 bits (188), Expect = e-100
Identities = 245/264 (92%)
Strand = Plus / Plus
Query: 246 agtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccggg 305
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 209 agtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccggg 268
Query: 306 gaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgta 365
||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 269 gaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgta 328
Query: 366 ccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagtt 425
|| || |||||||| ||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 329 gcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagtt 388
Query: 426 catgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcacctt 485
||||||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||
Sbjct: 389 catgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcacctt 448
Query: 486 gaagatgtagatcttgtacgtctc 509
|||||||||||||||||| |||||
Sbjct: 449 gaagatgtagatcttgtaagtctc 472
Score = 81.8 bits (41), Expect = 5e-013
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtggccttctc 623
|||||| |||||||| |||||||| |||||||||||||||||||||| |||||||||
Sbjct: 533 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctc 589
>gb|CF292148.1|CF292148 14ROOT--02-N19.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-N19, mRNA sequence
Length = 549
Score = 373 bits (188), Expect = e-100
Identities = 245/264 (92%)
Strand = Plus / Minus
Query: 246 agtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccggg 305
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 544 agtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccggg 485
Query: 306 gaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgta 365
||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 484 gaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgta 425
Query: 366 ccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagtt 425
|| || |||||||| ||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 424 gcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagtt 365
Query: 426 catgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcacctt 485
||||||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||
Sbjct: 364 catgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcacctt 305
Query: 486 gaagatgtagatcttgtacgtctc 509
|||||||||||||||||| |||||
Sbjct: 304 gaagatgtagatcttgtaggtctc 281
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| |||||||| |||||||| |||||||||||||||||||||| | ||
Sbjct: 220 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 161
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 160 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 101
Query: 678 gggcgccat 686
|||||||||
Sbjct: 100 gggcgccat 92
>gb|CF292227.1|CF292227 14ROOT--02-P16.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-P16, mRNA sequence
Length = 623
Score = 373 bits (188), Expect = e-100
Identities = 245/264 (92%)
Strand = Plus / Minus
Query: 246 agtgaacttggtgacggctttggtgccctcggagacggcgtgcttggcgagctcgccggg 305
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 535 agtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccggg 476
Query: 306 gaggacgaggcggacggaggtctggatctcgcgggacgtgatggtaggcttcttgttgta 365
||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 475 gaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgta 416
Query: 366 ccgcgccagcttggccgcctccgccgccagcttctcgaagatgtcgttgatgaaggagtt 425
|| || |||||||| ||||| || || ||||||||||||||||||||||||||||||||
Sbjct: 415 gcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagtt 356
Query: 426 catgatggacatggccttggacgagatgccaatgtccgggtgcacctgcttcagcacctt 485
||||||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||
Sbjct: 355 catgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcacctt 296
Query: 486 gaagatgtagatcttgtacgtctc 509
|||||||||||||||||| |||||
Sbjct: 295 gaagatgtagatcttgtaggtctc 272
Score = 113 bits (57), Expect = 1e-022
Identities = 110/129 (85%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 567 cttgcccgcggggagccgcttctcagccttgggcttcttccccgccgtg---------gc 617
|||||| |||||||| |||||||| |||||||||||||||||||||| | ||
Sbjct: 211 cttgccggcggggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 152
Query: 618 cttctccgccgccggctcctcctcggcaggcttcttggcggcgggcttcttctcggcctt 677
|||||||||||| ||||||||||| || |||||||| ||||| ||||||||||| |||||
Sbjct: 151 cttctccgccgcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgcctt 92
Query: 678 gggcgccat 686
|||||||||
Sbjct: 91 gggcgccat 83
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,570,022
Number of Sequences: 438736
Number of extensions: 1570022
Number of successful extensions: 22124
Number of sequences better than 0.5: 634
Number of HSP's better than 0.5 without gapping: 721
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 15195
Number of HSP's gapped (non-prelim): 6801
length of query: 777
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 756
effective length of database: 2,791,206,460
effective search space: 2110152083760
effective search space used: 2110152083760
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)