BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.12
(694 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AU082347.1|AU082347 AU082347 Rice callus Oryza sativa (j... 394 e-107
gb|AU082408.1|AU082408 AU082408 Rice panicle shorter than 3... 392 e-107
gb|AU097679.1|AU097679 AU097679 Rice root Oryza sativa (jap... 392 e-107
gb|CV728820.1|CV728820 FLO--01-F13.b1 Rice flower lambda ph... 392 e-107
dbj|AP002522.1| Oryza sativa (japonica cultivar-group) geno... 392 e-107
dbj|AP003045.2| Oryza sativa (japonica cultivar-group) geno... 392 e-107
gb|AACV01000209.1| Oryza sativa (japonica cultivar-group) c... 392 e-107
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 392 e-107
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 392 e-107
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 392 e-107
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 392 e-107
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 392 e-107
gb|AU097673.1|AU097673 AU097673 Rice panicle shorter than 3... 391 e-106
gb|CB670862.1|CB670862 OSJNEe04C16.f OSJNEe Oryza sativa (j... 391 e-106
gb|CO436072.1|CO436072 OsMR994 5MT resistant rice mutant cD... 391 e-106
gb|AC098832.3| Oryza sativa (japonica cultivar-group) chrom... 391 e-106
gb|AC104284.2| Oryza sativa (japonica cultivar-group) chrom... 391 e-106
dbj|AP002540.2| Oryza sativa (japonica cultivar-group) geno... 391 e-106
gb|AACV01000195.1| Oryza sativa (japonica cultivar-group) c... 391 e-106
gb|AACV01012743.1| Oryza sativa (japonica cultivar-group) c... 391 e-106
ref|XM_475912.1| Oryza sativa (japonica cultivar-group), p... 391 e-106
ref|NT_107222.1| Oryza sativa (japonica cultivar-group) 391 e-106
ref|NM_184374.1| Oryza sativa (japonica cultivar-group), mRNA 391 e-106
ref|NM_184399.1| Oryza sativa (japonica cultivar-group), mRNA 391 e-106
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 391 e-106
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 391 e-106
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 391 e-106
gb|AU032007.1|AU032007 AU032007 Rice root Oryza sativa (jap... 387 e-105
gb|AU097681.1|AU097681 AU097681 Rice root Oryza sativa (jap... 387 e-105
gb|CB662156.1|CB662156 OSJNEd05O18.f OSJNEd Oryza sativa (j... 387 e-105
gb|CB662157.1|CB662157 OSJNEd05O18.r OSJNEd Oryza sativa (j... 387 e-105
gb|CF278594.1|CF278594 14ETL--04-I24.b1 Rice etiolated leaf... 387 e-105
gb|CF291302.1|CF291302 14ROOT--01-K20.b1 Rice root plasmid ... 387 e-105
gb|CF292227.1|CF292227 14ROOT--02-P16.b1 Rice root plasmid ... 387 e-105
gb|CF297134.1|CF297134 30DGS--07-M18.b1 Rice leaf plasmid c... 387 e-105
gb|CF333473.1|CF333473 JMT--02-G04.b1 AtJMT-overexpressing ... 387 e-105
gb|CV731987.1|CV731987 FLO--06-E06.g1 Rice flower lambda ph... 387 e-105
gb|AACV01000215.1| Oryza sativa (japonica cultivar-group) c... 387 e-105
ref|NM_184407.1| Oryza sativa (japonica cultivar-group), mRNA 387 e-105
gb|AU097675.1|AU097675 AU097675 Rice immature leaf includin... 385 e-104
gb|CA998897.1|CA998897 S345N_D05 Rice cold stress germinati... 385 e-104
gb|CF307934.1|CF307934 ABF--01-I21.b1 ABF3-overexpressing t... 385 e-104
gb|CB670863.1|CB670863 OSJNEe04C16.r OSJNEe Oryza sativa (j... 383 e-104
gb|CF292148.1|CF292148 14ROOT--02-N19.b1 Rice root plasmid ... 383 e-104
gb|CV728225.1|CV728225 14Salt--06-N03.g1 Salt treated rice ... 383 e-104
gb|CV732516.1|CV732516 FLO--07-A10.b1 Rice flower lambda ph... 383 e-104
gb|CF290908.1|CF290908 14ROOT--01-B24.g1 Rice root plasmid ... 379 e-102
gb|CF291164.1|CF291164 14ROOT--01-H18.g1 Rice root plasmid ... 379 e-102
gb|CF292040.1|CF292040 14ROOT--02-L10.b1 Rice root plasmid ... 379 e-102
gb|AU031069.1|AU031069 AU031069 Rice cDNA from immature lea... 377 e-102
gb|AU082356.1|AU082356 AU082356 Rice callus Oryza sativa (j... 377 e-102
gb|AU097668.1|AU097668 AU097668 Rice callus Oryza sativa (j... 377 e-102
gb|CF292090.1|CF292090 14ROOT--02-M12.g1 Rice root plasmid ... 377 e-102
gb|CF333577.1|CF333577 JMT--02-I13.b1 AtJMT-overexpressing ... 377 e-102
gb|CV733415.1|CV733415 FLO--08-F04.g1 Rice flower lambda ph... 377 e-102
ref|NM_184405.1| Oryza sativa (japonica cultivar-group), mRNA 377 e-102
gb|AU070936.1|AU070936 AU070936 Rice cDNA from young root O... 375 e-101
gb|AU092503.1|AU092503 AU092503 Rice callus Oryza sativa (j... 375 e-101
gb|CA998848.1|CA998848 S345M_G12 Rice cold stress germinati... 375 e-101
gb|CF290947.1|CF290947 14ROOT--01-D01.b1 Rice root plasmid ... 375 e-101
gb|CF291163.1|CF291163 14ROOT--01-H18.b1 Rice root plasmid ... 375 e-101
gb|CF296221.1|CF296221 30DGS--06-H23.b1 Rice leaf plasmid c... 375 e-101
gb|CV730234.1|CV730234 FLO--03-K21.g1 Rice flower lambda ph... 375 e-101
gb|BP184585.1|BP184585 BP184585 pNS rice panicle cDNA, flow... 375 e-101
gb|BP184926.1|BP184926 BP184926 pNS rice callus cDNA Oryza ... 375 e-101
gb|AACV01000194.1| Oryza sativa (japonica cultivar-group) c... 375 e-101
gb|AACV01000214.1| Oryza sativa (japonica cultivar-group) c... 375 e-101
ref|NM_184371.1| Oryza sativa (japonica cultivar-group), mRNA 375 e-101
ref|NM_184403.1| Oryza sativa (japonica cultivar-group), mRNA 375 e-101
ref|NM_184409.1| Oryza sativa (japonica cultivar-group), mRNA 375 e-101
gb|CA755827.1|CA755827 BR030029000_PLATE_B12_90_096.ab1 OA ... 373 e-101
gb|CV729266.1|CV729266 FLO--02-A05.b1 Rice flower lambda ph... 373 e-101
gb|AU097674.1|AU097674 AU097674 Rice immature leaf includin... 369 1e-099
gb|CF292189.1|CF292189 14ROOT--02-O19.b1 Rice root plasmid ... 369 1e-099
gb|CA756225.1|CA756225 BR030038000_PLATE_A05_33_035.ab1 OA ... 367 5e-099
gb|CV730588.1|CV730588 FLO--04-D06.b1 Rice flower lambda ph... 367 5e-099
gb|CV731643.1|CV731643 FLO--05-M07.g1 Rice flower lambda ph... 367 5e-099
gb|AU029407.1|AU029407 AU029407 Rice panicle shorter than 3... 365 2e-098
gb|AU058394.1|AU058394 AU058394 Oryza sativa Nipponbare imm... 363 8e-098
gb|CV728821.1|CV728821 FLO--01-F13.g1 Rice flower lambda ph... 363 8e-098
gb|AU057602.2|AU057602 AU057602 Oryza sativa mature leaf Ni... 363 8e-098
gb|C27274.1|C27274 C27274 Rice callus cDNA Oryza sativa (ja... 361 3e-097
gb|CF280347.1|CF280347 14ETL--06-P18.b1 Rice etiolated leaf... 361 3e-097
gb|CV728178.1|CV728178 14Salt--06-L23.b1 Salt treated rice ... 359 1e-096
gb|AU057603.1|AU057603 AU057603 Oryza sativa mature leaf Ni... 357 5e-096
gb|AU030153.2|AU030153 AU030153 Rice cDNA from immature lea... 357 5e-096
gb|AU031294.1|AU031294 AU031294 Rice cDNA from immature lea... 355 2e-095
gb|CF281758.1|CF281758 14ETL--08-P04.g1 Rice etiolated leaf... 351 3e-094
gb|AU031202.1|AU031202 AU031202 Rice cDNA from immature lea... 349 1e-093
gb|CF281520.1|CF281520 14ETL--08-J17.b1 Rice etiolated leaf... 349 1e-093
gb|CF291327.1|CF291327 14ROOT--01-L08.g1 Rice root plasmid ... 347 5e-093
gb|AU097680.2|AU097680 AU097680 Rice root Oryza sativa (jap... 347 5e-093
gb|CB661775.1|CB661775 OSJNEd05B14.f OSJNEd Oryza sativa (j... 345 2e-092
gb|CF291303.1|CF291303 14ROOT--01-K20.g1 Rice root plasmid ... 345 2e-092
gb|CF334827.1|CF334827 JMT--04-E05.b1 AtJMT-overexpressing ... 345 2e-092
gb|CO435616.1|CO435616 OsMR682 5MT resistant rice mutant cD... 345 2e-092
gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbar... 345 2e-092
gb|AACV01006345.1| Oryza sativa (japonica cultivar-group) c... 345 2e-092
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 345 2e-092
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 345 2e-092
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 345 2e-092
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 345 2e-092
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 345 2e-092
gb|AU091836.1|AU091836 AU091836 Rice callus Oryza sativa (j... 343 8e-092
gb|AU183294.1|AU183294 AU183294 Rice cDNA from immature lea... 341 3e-091
gb|C73984.2|C73984 C73984 Rice panicle shorter than 3cm Ory... 339 1e-090
gb|CF281757.1|CF281757 14ETL--08-P04.b1 Rice etiolated leaf... 339 1e-090
gb|CF290907.1|CF290907 14ROOT--01-B24.b1 Rice root plasmid ... 339 1e-090
gb|CF313653.1|CF313653 HD--01-N17.g1 OsHDAC1-overexpressing... 339 1e-090
gb|CF333474.1|CF333474 JMT--02-G04.g1 AtJMT-overexpressing ... 339 1e-090
gb|C74070.1|C74070 C74070 Rice panicle shorter than 3cm Ory... 337 5e-090
gb|AU029435.1|AU029435 AU029435 Rice panicle shorter than 3... 335 2e-089
gb|AU068669.1|AU068669 AU068669 Rice callus Oryza sativa (j... 335 2e-089
gb|AU068670.1|AU068670 AU068670 Rice callus Oryza sativa (j... 335 2e-089
gb|AU076129.1|AU076129 AU076129 Rice panicle shorter than 3... 335 2e-089
gb|AU097671.1|AU097671 AU097671 Rice panicle shorter than 3... 335 2e-089
gb|AU097672.1|AU097672 AU097672 Rice panicle shorter than 3... 335 2e-089
gb|CF290925.1|CF290925 14ROOT--01-C11.g1 Rice root plasmid ... 335 2e-089
gb|CF318598.1|CF318598 HD--08-M15.g1 OsHDAC1-overexpressing... 335 2e-089
gb|CF338483.1|CF338483 RCL1--01-N06.g1 Regenerated callus l... 335 2e-089
gb|CF338741.1|CF338741 RCL1--02-K06.g1 Regenerated callus l... 335 2e-089
gb|CF339512.1|CF339512 RCL1--05-B11.g1 Regenerated callus l... 335 2e-089
gb|CF339642.1|CF339642 RCL1--05-I03.g1 Regenerated callus l... 335 2e-089
gb|CF339736.1|CF339736 RCL1--05-M18.g1 Regenerated callus l... 335 2e-089
gb|CF339787.1|CF339787 RCL1--05-O24.g1 Regenerated callus l... 335 2e-089
gb|CF340036.1|CF340036 RCL1--06-M03.g1 Regenerated callus l... 335 2e-089
gb|CF340228.1|CF340228 RCL1--07-F18.g1 Regenerated callus l... 335 2e-089
gb|CF340525.1|CF340525 RCL1--08-E24.g1 Regenerated callus l... 335 2e-089
gb|CF340729.1|CF340729 RCL1--08-P04.g1 Regenerated callus l... 335 2e-089
gb|CV724027.1|CV724027 root--05-J06.g1 Rice root lambda pha... 335 2e-089
gb|CV727429.1|CV727429 14Salt--05-J04.b1 Salt treated rice ... 335 2e-089
gb|CV731425.1|CV731425 FLO--05-H09.b1 Rice flower lambda ph... 335 2e-089
gb|CV733073.1|CV733073 FLO--07-N06.b1 Rice flower lambda ph... 335 2e-089
dbj|AP004620.3| Oryza sativa (japonica cultivar-group) geno... 335 2e-089
gb|AACV01018772.1| Oryza sativa (japonica cultivar-group) c... 335 2e-089
ref|XM_483094.1| Oryza sativa (japonica cultivar-group), mRNA 335 2e-089
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 335 2e-089
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 335 2e-089
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 335 2e-089
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 335 2e-089
gb|AU182734.1|AU182734 AU182734 Rice panicle shorter than 3... 333 7e-089
gb|CV725853.1|CV725853 14Salt--03-C23.b1 Salt treated rice ... 333 7e-089
gb|CV730589.1|CV730589 FLO--04-D06.g1 Rice flower lambda ph... 333 7e-089
gb|CF292149.1|CF292149 14ROOT--02-N19.g1 Rice root plasmid ... 331 3e-088
gb|CV725979.1|CV725979 14Salt--03-G01.b1 Salt treated rice ... 331 3e-088
gb|CV731986.1|CV731986 FLO--06-E06.b1 Rice flower lambda ph... 329 1e-087
gb|CF291429.1|CF291429 14ROOT--01-N15.b1 Rice root plasmid ... 327 5e-087
gb|CF313968.1|CF313968 HD--02-E24.g1 OsHDAC1-overexpressing... 327 5e-087
gb|CV725854.1|CV725854 14Salt--03-C23.g1 Salt treated rice ... 327 5e-087
gb|CV733163.1|CV733163 FLO--07-P07.b1 Rice flower lambda ph... 327 5e-087
gb|CV734119.1|CV734119 FLO--09-F11.b1 Rice flower lambda ph... 327 5e-087
gb|CF279531.1|CF279531 14ETL--05-N20.b1 Rice etiolated leaf... 325 2e-086
gb|CV728989.1|CV728989 FLO--01-J16.g1 Rice flower lambda ph... 325 2e-086
gb|CF292089.1|CF292089 14ROOT--02-M12.b1 Rice root plasmid ... 323 7e-086
gb|CV725902.1|CV725902 14Salt--03-E01.b1 Salt treated rice ... 323 7e-086
gb|CF338330.1|CF338330 RCL1--01-F18.g1 Regenerated callus l... 321 3e-085
gb|CF340422.1|CF340422 RCL1--07-P17.g1 Regenerated callus l... 321 3e-085
gb|CV727985.1|CV727985 14Salt--06-G22.b1 Salt treated rice ... 321 3e-085
gb|CV729576.1|CV729576 FLO--02-J14.b1 Rice flower lambda ph... 321 3e-085
gb|AU076128.1|AU076128 AU076128 Rice panicle shorter than 3... 319 1e-084
gb|CV727430.1|CV727430 14Salt--05-J04.g1 Salt treated rice ... 319 1e-084
gb|CV732517.1|CV732517 FLO--07-A10.g1 Rice flower lambda ph... 319 1e-084
gb|AU062984.1|AU062984 AU062984 Rice callus Oryza sativa (j... 317 4e-084
gb|AU097676.1|AU097676 AU097676 Rice immature leaf includin... 317 4e-084
gb|AU097677.1|AU097677 AU097677 Rice cDNA from immature lea... 317 4e-084
gb|CV729459.1|CV729459 FLO--02-F22.b1 Rice flower lambda ph... 315 2e-083
gb|AU070851.1|AU070851 AU070851 Rice cDNA from young root O... 313 7e-083
gb|CV721027.1|CV721027 YBH--02-K11.b1 Rice before heading y... 313 7e-083
gb|CV725903.1|CV725903 14Salt--03-E01.g1 Salt treated rice ... 309 1e-081
gb|CV731642.1|CV731642 FLO--05-M07.b1 Rice flower lambda ph... 307 4e-081
gb|CV729577.1|CV729577 FLO--02-J14.g1 Rice flower lambda ph... 305 2e-080
gb|CF292220.1|CF292220 14ROOT--02-P12.g1 Rice root plasmid ... 303 7e-080
gb|CV729874.1|CV729874 FLO--03-C07.b1 Rice flower lambda ph... 303 7e-080
gb|AU097683.1|AU097683 AU097683 Rice cDNA from young root O... 299 1e-078
gb|CV727137.1|CV727137 14Salt--05-C06.g1 Salt treated rice ... 297 4e-078
gb|CF293430.1|CF293430 30DGS--02-J22.b1 Rice leaf plasmid c... 295 2e-077
gb|CV721437.1|CV721437 YBH--04-C03.b1 Rice before heading y... 295 2e-077
gb|CV729210.1|CV729210 FLO--01-O23.b1 Rice flower lambda ph... 295 2e-077
gb|CV729413.1|CV729413 FLO--02-E17.b1 Rice flower lambda ph... 295 2e-077
gb|CV731556.1|CV731556 FLO--05-K07.b1 Rice flower lambda ph... 295 2e-077
gb|CV720894.1|CV720894 YBH--02-D09.b1 Rice before heading y... 293 6e-077
gb|CV729191.1|CV729191 FLO--01-O12.b1 Rice flower lambda ph... 291 3e-076
gb|C97158.1|C97158 C97158 Rice callus Oryza sativa (japonic... 289 1e-075
gb|AU063158.1|AU063158 AU063158 Rice callus Oryza sativa (j... 289 1e-075
gb|CF339471.1|CF339471 RCL1--04-P13.g1 Regenerated callus l... 289 1e-075
gb|CF338869.1|CF338869 RCL1--03-A13.g1 Regenerated callus l... 287 4e-075
gb|CF340382.1|CF340382 RCL1--07-N17.g1 Regenerated callus l... 287 4e-075
gb|CF340744.1|CF340744 RCL1--08-P20.g1 Regenerated callus l... 287 4e-075
gb|CV734350.1|CV734350 FLO--09-K18.b1 Rice flower lambda ph... 287 4e-075
gb|CV729192.1|CV729192 FLO--01-O12.g1 Rice flower lambda ph... 285 2e-074
gb|CV727136.1|CV727136 14Salt--05-C06.b1 Salt treated rice ... 283 6e-074
gb|CV731957.1|CV731957 FLO--06-D15.b1 Rice flower lambda ph... 283 6e-074
gb|D22681.1|D22681 RICC0893A Rice callus Oryza sativa (japo... 281 2e-073
gb|CV726600.1|CV726600 14Salt--04-F09.g1 Salt treated rice ... 280 1e-072
gb|CV729896.1|CV729896 FLO--03-C19.b1 Rice flower lambda ph... 278 4e-072
gb|CV731426.1|CV731426 FLO--05-H09.g1 Rice flower lambda ph... 278 4e-072
gb|CV733685.1|CV733685 FLO--08-L10.g1 Rice flower lambda ph... 278 4e-072
gb|CV734351.1|CV734351 FLO--09-K18.g1 Rice flower lambda ph... 278 4e-072
gb|AU075448.1|AU075448 AU075448 Rice cDNA from immature lea... 276 2e-071
gb|AU095013.1|AU095013 AU095013 Rice immature leaf includin... 276 2e-071
gb|CV728663.1|CV728663 FLO--01-B21.g1 Rice flower lambda ph... 276 2e-071
gb|CV731958.1|CV731958 FLO--06-D15.g1 Rice flower lambda ph... 276 2e-071
gb|AC117265.2| Oryza sativa (japonica cultivar-group) chrom... 276 2e-071
gb|AACV01012349.1| Oryza sativa (japonica cultivar-group) c... 276 2e-071
ref|XM_475367.1| Oryza sativa (japonica cultivar-group), p... 276 2e-071
ref|NT_107213.1| Oryza sativa (japonica cultivar-group) 276 2e-071
gb|AU097670.1|AU097670 AU097670 Rice panicle (longer than 1... 274 6e-071
gb|AU174701.1|AU174701 AU174701 Rice cDNA from leaf Oryza s... 274 6e-071
gb|CV732640.1|CV732640 FLO--07-D08.b1 Rice flower lambda ph... 274 6e-071
gb|AACV01002648.1| Oryza sativa (japonica cultivar-group) c... 274 6e-071
ref|NM_190523.1| Oryza sativa (japonica cultivar-group), p... 274 6e-071
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 274 6e-071
dbj|AP003231.3| Oryza sativa (japonica cultivar-group) geno... 274 6e-071
dbj|AP003241.3| Oryza sativa (japonica cultivar-group) geno... 274 6e-071
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 274 6e-071
gb|AQ362504.2|AQ362504 nbxb0050G11f CUGI Rice BAC Library O... 272 2e-070
gb|CV725419.1|CV725419 14Salt--02-H24.g1 Salt treated rice ... 272 2e-070
gb|CV731557.1|CV731557 FLO--05-K07.g1 Rice flower lambda ph... 272 2e-070
gb|AACV01001262.1| Oryza sativa (japonica cultivar-group) c... 272 2e-070
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 272 2e-070
dbj|AP003144.1| Oryza sativa (japonica cultivar-group) geno... 272 2e-070
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 272 2e-070
gb|CV733414.1|CV733414 FLO--08-F04.b1 Rice flower lambda ph... 270 9e-070
gb|CV734434.1|CV734434 FLO--09-M20.g1 Rice flower lambda ph... 270 9e-070
gb|AU065894.1|AU065894 AU065894 Rice green shoot Oryza sati... 268 4e-069
gb|CF292228.1|CF292228 14ROOT--02-P16.g1 Rice root plasmid ... 268 4e-069
gb|AU172806.1|AU172806 AU172806 Rice panicle shorter than 3... 266 1e-068
gb|AU064314.2|AU064314 AU064314 Rice panicle (longer than 1... 266 1e-068
gb|CF292041.1|CF292041 14ROOT--02-L10.g1 Rice root plasmid ... 266 1e-068
gb|CF293431.1|CF293431 30DGS--02-J22.g1 Rice leaf plasmid c... 266 1e-068
gb|CV723677.1|CV723677 root--04-G10.g1 Rice root lambda pha... 266 1e-068
gb|CF290948.1|CF290948 14ROOT--01-D01.g1 Rice root plasmid ... 262 2e-067
gb|CA999413.1|CA999413 S234H_C02 Rice cold stress germinati... 258 4e-066
gb|CF325670.1|CF325670 JMT1--03-N20.g1 AtJMT-overexpressing... 258 4e-066
gb|CV734120.1|CV734120 FLO--09-F11.g1 Rice flower lambda ph... 258 4e-066
gb|AU182176.1|AU182176 AU182176 Rice callus (2001) Oryza sa... 252 2e-064
gb|AZ130708.1|AZ130708 OSJNBb0062D13f CUGI Rice BAC Library... 248 3e-063
gb|AU031162.1|AU031162 AU031162 Rice cDNA from immature lea... 248 3e-063
gb|CV721456.1|CV721456 YBH--04-D02.b1 Rice before heading y... 246 1e-062
gb|CV729931.1|CV729931 FLO--03-D14.g1 Rice flower lambda ph... 246 1e-062
gb|CV733074.1|CV733074 FLO--07-N06.g1 Rice flower lambda ph... 244 5e-062
gb|AU057673.1|AU057673 AU057673 Oryza sativa mature leaf Ni... 238 3e-060
gb|CV732641.1|CV732641 FLO--07-D08.g1 Rice flower lambda ph... 238 3e-060
gb|C74089.1|C74089 C74089 Rice panicle shorter than 3cm Ory... 236 1e-059
gb|CF281521.1|CF281521 14ETL--08-J17.g1 Rice etiolated leaf... 234 5e-059
gb|C97239.1|C97239 C97239 Rice callus Oryza sativa (japonic... 232 2e-058
gb|CV733684.1|CV733684 FLO--08-L10.b1 Rice flower lambda ph... 232 2e-058
gb|C98207.1|C98207 C98207 Rice callus Oryza sativa (japonic... 228 3e-057
gb|AU097669.1|AU097669 AU097669 Rice callus Oryza sativa (j... 224 5e-056
gb|C97210.1|C97210 C97210 Rice callus Oryza sativa (japonic... 220 8e-055
gb|CF290924.1|CF290924 14ROOT--01-C11.b1 Rice root plasmid ... 220 8e-055
gb|AU070557.1|AU070557 AU070557 Rice shoot Oryza sativa (ja... 218 3e-054
gb|CF292219.1|CF292219 14ROOT--02-P12.b1 Rice root plasmid ... 216 1e-053
gb|CV733085.1|CV733085 FLO--07-N13.g1 Rice flower lambda ph... 210 7e-052
gb|D48146.2|D48146 RICS14215A Rice green shoot Oryza sativa... 210 7e-052
gb|C97157.1|C97157 C97157 Rice callus Oryza sativa (japonic... 206 1e-050
gb|AU225174.1|AU225174 AU225174 Oryza sativa Koshihikari pi... 202 2e-049
gb|AU062949.2|AU062949 AU062949 Rice callus Oryza sativa (j... 200 7e-049
gb|CV720821.1|CV720821 YBH--01-P10.b1 Rice before heading y... 198 3e-048
gb|D49215.1|D49215 RICS16333A Rice green shoot Oryza sativa... 192 2e-046
gb|AU184845.1|AU184845 AU184845 Rice cDNA from young root O... 192 2e-046
gb|CF312627.1|CF312627 ABF--08-H11.g1 ABF3-overexpressing t... 192 2e-046
gb|CV728224.1|CV728224 14Salt--06-N03.b1 Salt treated rice ... 182 2e-043
gb|C73966.1|C73966 C73966 Rice panicle shorter than 3cm Ory... 178 3e-042
gb|AU092764.1|AU092764 AU092764 Rice callus Oryza sativa (j... 178 3e-042
gb|AQ157995.1|AQ157995 nbxb0010O24f CUGI Rice BAC Library O... 176 1e-041
gb|D23591.1|D23591 RICC3057A Rice callus Oryza sativa (japo... 172 2e-040
gb|CF280348.1|CF280348 14ETL--06-P18.g1 Rice etiolated leaf... 172 2e-040
gb|CF277856.1|CF277856 14ETL--03-I19.b1 Rice etiolated leaf... 168 3e-039
gb|CV731377.1|CV731377 FLO--05-G05.g1 Rice flower lambda ph... 163 2e-037
gb|C74202.1|C74202 C74202 Rice panicle shorter than 3cm Ory... 153 1e-034
gb|D15624.1|D15624 RICC0972A Rice callus Oryza sativa (japo... 153 1e-034
gb|AU064441.1|AU064441 AU064441 Rice panicle shorter than 3... 153 1e-034
gb|CF277857.1|CF277857 14ETL--03-I19.g1 Rice etiolated leaf... 147 9e-033
gb|CV728988.1|CV728988 FLO--01-J16.b1 Rice flower lambda ph... 147 9e-033
gb|CF339158.1|CF339158 RCL1--03-P11.g1 Regenerated callus l... 145 4e-032
gb|AQ868678.1|AQ868678 nbeb0030B11r CUGI Rice BAC Library (... 143 1e-031
gb|D40363.1|D40363 RICS2285A Rice shoot Oryza sativa (japon... 141 6e-031
gb|D25082.1|D25082 RICR3125A Rice root Oryza sativa (japoni... 141 6e-031
gb|C27926.1|C27926 C27926 Rice callus cDNA Oryza sativa (ja... 135 4e-029
gb|AU082915.1|AU082915 AU082915 Rice callus Oryza sativa (j... 135 4e-029
dbj|AK059159.1| Oryza sativa (japonica cultivar-group) cDNA... 135 4e-029
gb|D22526.1|D22526 RICC0138B Rice callus Oryza sativa (japo... 133 1e-028
gb|AU095590.1|AU095590 AU095590 Rice cDNA from young root O... 133 1e-028
gb|AU058172.1|AU058172 AU058172 Oryza sativa Nipponbare imm... 129 2e-027
gb|CF315774.1|CF315774 HD--04-N03.b1 OsHDAC1-overexpressing... 129 2e-027
gb|CV725777.1|CV725777 14Salt--03-B01.g1 Salt treated rice ... 129 2e-027
gb|CV731376.1|CV731376 FLO--05-G05.b1 Rice flower lambda ph... 129 2e-027
gb|AU058305.1|AU058305 AU058305 Oryza sativa Nipponbare imm... 125 3e-026
gb|D47132.1|D47132 RICS12273A Rice green shoot Oryza sativa... 123 1e-025
gb|D24618.1|D24618 RICR2259A Rice root Oryza sativa (japoni... 119 2e-024
gb|C27000.1|C27000 C27000 Rice callus cDNA Oryza sativa (ja... 117 8e-024
gb|C27445.1|C27445 C27445 Rice callus cDNA Oryza sativa (ja... 113 1e-022
gb|C74297.1|C74297 C74297 Rice panicle shorter than 3cm Ory... 113 1e-022
gb|AU062423.1|AU062423 AU062423 Rice callus Oryza sativa (j... 113 1e-022
gb|D22527.1|D22527 RICC0138A Rice callus Oryza sativa (japo... 111 5e-022
gb|D23046.1|D23046 RICC2090A Rice callus Oryza sativa (japo... 105 3e-020
gb|AU058177.1|AU058177 AU058177 Oryza sativa Nipponbare imm... 105 3e-020
gb|AU029901.1|AU029901 AU029901 Rice cDNA from immature lea... 103 1e-019
gb|C74145.1|C74145 C74145 Rice panicle shorter than 3cm Ory... 101 5e-019
gb|D23918.1|D23918 RICR0573A Rice root Oryza sativa (japoni... 101 5e-019
gb|AU030152.1|AU030152 AU030152 Rice cDNA from immature lea... 101 5e-019
gb|CF278595.1|CF278595 14ETL--04-I24.g1 Rice etiolated leaf... 100 2e-018
gb|CF334828.1|CF334828 JMT--04-E05.g1 AtJMT-overexpressing ... 98 8e-018
gb|CV729460.1|CV729460 FLO--02-F22.g1 Rice flower lambda ph... 98 8e-018
gb|CV729554.1|CV729554 FLO--02-I20.b1 Rice flower lambda ph... 98 8e-018
gb|AU174702.1|AU174702 AU174702 Rice cDNA from leaf Oryza s... 96 3e-017
gb|CV725556.1|CV725556 14Salt--02-L07.b1 Salt treated rice ... 96 3e-017
gb|C97215.2|C97215 C97215 Rice callus Oryza sativa (japonic... 96 3e-017
gb|AU096554.1|AU096554 AU096554 Rice green shoot Oryza sati... 94 1e-016
gb|AU097667.1|AU097667 AU097667 Rice callus Oryza sativa (j... 94 1e-016
gb|CV729930.1|CV729930 FLO--03-D14.b1 Rice flower lambda ph... 94 1e-016
gb|CV730130.1|CV730130 FLO--03-I07.b1 Rice flower lambda ph... 90 2e-015
dbj|AP004558.3| Oryza sativa (japonica cultivar-group) geno... 86 3e-014
dbj|AP004665.4| Oryza sativa (japonica cultivar-group) geno... 86 3e-014
gb|AACV01018587.1| Oryza sativa (japonica cultivar-group) c... 86 3e-014
gb|AU062951.1|AU062951 AU062951 Rice callus Oryza sativa (j... 84 1e-013
gb|AU064386.1|AU064386 AU064386 Rice panicle shorter than 3... 84 1e-013
gb|D23468.1|D23468 RICC2857A Rice callus Oryza sativa (japo... 80 2e-012
gb|AU063733.1|AU063733 AU063733 Rice callus Oryza sativa (j... 80 2e-012
dbj|AK108119.1| Oryza sativa (japonica cultivar-group) cDNA... 80 2e-012
gb|AQ161058.1|AQ161058 nbxb0006M04f CUGI Rice BAC Library O... 78 7e-012
gb|CV727986.1|CV727986 14Salt--06-G22.g1 Salt treated rice ... 78 7e-012
ref|XM_482672.1| Oryza sativa (japonica cultivar-group), mRNA 78 7e-012
gb|CV733627.1|CV733627 FLO--08-K01.g1 Rice flower lambda ph... 76 3e-011
gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbar... 74 1e-010
dbj|AP003918.3| Oryza sativa (japonica cultivar-group) geno... 74 1e-010
gb|AACV01006503.1| Oryza sativa (japonica cultivar-group) c... 74 1e-010
gb|AACV01017940.1| Oryza sativa (japonica cultivar-group) c... 74 1e-010
dbj|AP005390.2| Oryza sativa (japonica cultivar-group) geno... 74 1e-010
gb|AU097666.1|AU097666 AU097666 Rice callus Oryza sativa (j... 72 4e-010
dbj|AP005069.2| Oryza sativa (japonica cultivar-group) geno... 72 4e-010
ref|NT_107237.1| Oryza sativa (japonica cultivar-group) 72 4e-010
dbj|AP006164.2| Oryza sativa (japonica cultivar-group) geno... 72 4e-010
dbj|AP006166.3| Oryza sativa (japonica cultivar-group) geno... 72 4e-010
gb|AACV01013677.1| Oryza sativa (japonica cultivar-group) c... 72 4e-010
gb|AACV01020855.1| Oryza sativa (japonica cultivar-group) c... 72 4e-010
ref|NT_107179.1| Oryza sativa (japonica cultivar-group) 72 4e-010
gb|CH401245.1| Oryza sativa (japonica cultivar-group) chrom... 72 4e-010
gb|CH401210.1| Oryza sativa (japonica cultivar-group) chrom... 72 4e-010
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 72 4e-010
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 72 4e-010
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 72 4e-010
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 72 4e-010
emb|AL731874.4|CNS08C8E Oryza sativa chromosome 12, . BAC O... 68 7e-009
gb|AC135914.2| Oryza sativa (japonica cultivar-group) chrom... 68 7e-009
gb|AC136226.2| Oryza sativa (japonica cultivar-group) chrom... 68 7e-009
ref|NT_079833.2| Oryza sativa (japonica cultivar-group) 68 7e-009
gb|AACV01011154.1| Oryza sativa (japonica cultivar-group) c... 68 7e-009
gb|AACV01011256.1| Oryza sativa (japonica cultivar-group) c... 68 7e-009
ref|NT_107225.1| Oryza sativa (japonica cultivar-group) 68 7e-009
gb|CH401192.1| Oryza sativa (japonica cultivar-group) chrom... 68 7e-009
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 68 7e-009
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 68 7e-009
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 68 7e-009
gb|AACV01002319.1| Oryza sativa (japonica cultivar-group) c... 66 3e-008
dbj|AP002972.3| Oryza sativa (japonica cultivar-group) geno... 66 3e-008
gb|D39530.1|D39530 RICS0937A Rice shoot Oryza sativa (japon... 62 4e-007
gb|CF279284.1|CF279284 14ETL--05-I13.b1 Rice etiolated leaf... 62 4e-007
gb|AC139174.3| Oryza sativa chromosome 3 BAC OSJNBb0065L20 ... 60 2e-006
gb|AACV01005126.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
gb|AACV01007551.1| Oryza sativa (japonica cultivar-group) c... 60 2e-006
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 60 2e-006
ref|NT_107185.1| Oryza sativa (japonica cultivar-group) 60 2e-006
dbj|AP004160.2| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
dbj|AP005885.3| Oryza sativa (japonica cultivar-group) geno... 60 2e-006
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 60 2e-006
gb|CF315295.1|CF315295 HD--04-C15.g1 OsHDAC1-overexpressing... 58 7e-006
gb|AC137921.2| Oryza sativa chromosome 3 BAC OSJNBa0027H16 ... 58 7e-006
gb|AC129224.2| Oryza sativa (japonica cultivar-group) chrom... 58 7e-006
gb|AC120888.2| Oryza sativa (japonica cultivar-group) chrom... 58 7e-006
ref|NT_107135.1| Oryza sativa (japonica cultivar-group) 58 7e-006
gb|AACV01007221.1| Oryza sativa (japonica cultivar-group) c... 58 7e-006
gb|AACV01020975.1| Oryza sativa (japonica cultivar-group) c... 58 7e-006
gb|AACV01023698.1| Oryza sativa (japonica cultivar-group) c... 58 7e-006
ref|NT_080061.1| Oryza sativa (japonica cultivar-group) chr... 58 7e-006
ref|XM_463083.1| Oryza sativa (japonica cultivar-group), mRNA 58 7e-006
ref|NT_107174.1| Oryza sativa (japonica cultivar-group) 58 7e-006
gb|CH401266.1| Oryza sativa (japonica cultivar-group) chrom... 58 7e-006
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 58 7e-006
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 58 7e-006
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 58 7e-006
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 58 7e-006
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 58 7e-006
gb|CF279532.1|CF279532 14ETL--05-N20.g1 Rice etiolated leaf... 56 3e-005
gb|CF338670.1|CF338670 RCL1--02-G18.g1 Regenerated callus l... 56 3e-005
gb|AC108883.1| Genomic sequence for (japonica cultivar-grou... 54 1e-004
gb|AC145127.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
gb|AC134341.2| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
gb|AACV01010945.1| Oryza sativa (japonica cultivar-group) c... 54 1e-004
gb|AACV01025707.1| Oryza sativa (japonica cultivar-group) C... 54 1e-004
ref|NT_080060.1| Oryza sativa (japonica cultivar-group) chr... 54 1e-004
ref|NT_107216.1| Oryza sativa (japonica cultivar-group) 54 1e-004
gb|CH401300.1| Oryza sativa (japonica cultivar-group) scaff... 54 1e-004
gb|AC166065.1| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
gb|AC079632.4| Oryza sativa (japonica cultivar-group) chrom... 54 1e-004
emb|AL831801.4|CNS08CAE Oryza sativa chromosome 12, . BAC O... 52 4e-004
dbj|AP005286.3| Oryza sativa (japonica cultivar-group) geno... 52 4e-004
dbj|AP005532.3| Oryza sativa (japonica cultivar-group) geno... 52 4e-004
dbj|AP003808.3| Oryza sativa (japonica cultivar-group) geno... 52 4e-004
gb|AACV01003979.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
gb|AACV01004890.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
gb|AACV01016138.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
gb|AACV01019447.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
gb|AACV01021331.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
gb|AACV01024399.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
ref|NT_080065.1| Oryza sativa (japonica cultivar-group) chr... 52 4e-004
ref|NT_107079.1| Oryza sativa (japonica cultivar-group) 52 4e-004
dbj|AP005839.3| Oryza sativa (japonica cultivar-group) geno... 52 4e-004
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 52 4e-004
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 52 4e-004
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 52 4e-004
gb|CH401274.1| Oryza sativa (japonica cultivar-group) chrom... 52 4e-004
gb|CH401253.1| Oryza sativa (japonica cultivar-group) chrom... 52 4e-004
gb|CH401241.1| Oryza sativa (japonica cultivar-group) chrom... 52 4e-004
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 52 4e-004
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 52 4e-004
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 52 4e-004
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 52 4e-004
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 52 4e-004
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 52 4e-004
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 52 4e-004
gb|AC083945.3| Oryza sativa (japonica cultivar-group) chrom... 52 4e-004
gb|AQ870965.1|AQ870965 nbeb0041J05r CUGI Rice BAC Library (... 50 0.002
gb|CA755693.1|CA755693 BR030026001_BR030_B03_18_025.ab1 OA ... 50 0.002
gb|CF313652.1|CF313652 HD--01-N17.b1 OsHDAC1-overexpressing... 50 0.002
gb|CF315294.1|CF315294 HD--04-C15.b1 OsHDAC1-overexpressing... 50 0.002
gb|AC104714.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|AC104715.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
dbj|AK106505.1| Oryza sativa (japonica cultivar-group) cDNA... 50 0.002
gb|AC087851.4|AC087851 Oryza sativa chromosome 3 BAC OSJNBb... 50 0.002
gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 ... 50 0.002
gb|AC130603.2| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
ref|NT_107078.1| Oryza sativa (japonica cultivar-group) 50 0.002
dbj|AP006162.2| Oryza sativa (japonica cultivar-group) geno... 50 0.002
gb|AACV01007661.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01007758.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01012563.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01012890.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01017932.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
gb|AACV01020566.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
dbj|AP002837.2| Oryza sativa (japonica cultivar-group) geno... 50 0.002
ref|NT_107217.1| Oryza sativa (japonica cultivar-group) 50 0.002
ref|NT_079916.2| Oryza sativa (japonica cultivar-group) 50 0.002
dbj|AP001389.1| Oryza sativa (japonica cultivar-group) geno... 50 0.002
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 50 0.002
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
dbj|AP004631.1| Oryza sativa (japonica cultivar-group) chro... 48 0.006
dbj|AP004465.3| Oryza sativa (japonica cultivar-group) geno... 48 0.006
gb|AC130727.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.006
emb|AL731583.2|OSJN00231 Oryza sativa genomic DNA, chromoso... 48 0.006
dbj|AP004461.3| Oryza sativa (japonica cultivar-group) geno... 48 0.006
gb|AC130728.2| Oryza sativa (japonica cultivar-group) chrom... 48 0.006
gb|AC108501.2| Oryza sativa (japonica cultivar-group) chrom... 48 0.006
dbj|AP005740.3| Oryza sativa (japonica cultivar-group) geno... 48 0.006
ref|NT_107211.1| Oryza sativa (japonica cultivar-group) 48 0.006
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 48 0.006
dbj|AP003622.3| Oryza sativa (japonica cultivar-group) geno... 48 0.006
gb|AACV01002285.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
gb|AACV01009048.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
gb|AACV01012051.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
gb|AACV01012819.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
gb|AACV01014439.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
gb|AACV01017271.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
gb|AACV01018311.1| Oryza sativa (japonica cultivar-group) c... 48 0.006
ref|NT_079855.2| Oryza sativa (japonica cultivar-group) 48 0.006
gb|AC136217.4| Oryza sativa (japonica cultivar-group) chrom... 48 0.006
dbj|AP003142.2| Oryza sativa (japonica cultivar-group) geno... 48 0.006
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.006
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.006
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.006
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.006
emb|AL731604.3|OSJN00247 Oryza sativa genomic DNA, chromoso... 48 0.006
gb|AC165371.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.006
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 48 0.006
gb|AC123524.2| Oryza sativa (japonica cultivar-group) chrom... 46 0.025
gb|AC134256.4| Oryza sativa (japonica cultivar-group), comp... 46 0.025
dbj|AP004801.3| Oryza sativa (japonica cultivar-group) geno... 46 0.025
ref|NT_079878.2| Oryza sativa (japonica cultivar-group) 46 0.025
ref|NT_107119.1| Oryza sativa (japonica cultivar-group) 46 0.025
ref|NT_107144.1| Oryza sativa (japonica cultivar-group) 46 0.025
ref|NT_107091.1| Oryza sativa (japonica cultivar-group), co... 46 0.025
dbj|AP002953.2| Oryza sativa (japonica cultivar-group) geno... 46 0.025
dbj|AP005929.3| Oryza sativa (japonica cultivar-group) geno... 46 0.025
gb|AACV01000906.1| Oryza sativa (japonica cultivar-group) c... 46 0.025
gb|AACV01001477.1| Oryza sativa (japonica cultivar-group) c... 46 0.025
gb|AACV01003786.1| Oryza sativa (japonica cultivar-group) c... 46 0.025
gb|AACV01008409.1| Oryza sativa (japonica cultivar-group) c... 46 0.025
gb|AACV01014110.1| Oryza sativa (japonica cultivar-group) c... 46 0.025
gb|AACV01019132.1| Oryza sativa (japonica cultivar-group) c... 46 0.025
gb|AACV01022622.1| Oryza sativa (japonica cultivar-group) c... 46 0.025
gb|AACV01022882.1| Oryza sativa (japonica cultivar-group) c... 46 0.025
gb|AACV01023287.1| Oryza sativa (japonica cultivar-group) c... 46 0.025
gb|AACV01029660.1| Oryza sativa (japonica cultivar-group) C... 46 0.025
ref|NT_079961.2| Oryza sativa (japonica cultivar-group) 46 0.025
ref|NT_107076.1| Oryza sativa (japonica cultivar-group) 46 0.025
>gb|AU082347.1|AU082347 AU082347 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C51832, mRNA sequence
Length = 618
Score = 394 bits (199), Expect = e-107
Identities = 273/298 (91%)
Strand = Plus / Minus
Query: 180 aatctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggc 239
|||||||| || |||||||| || || |||||||||||||| ||||| |||||||||||
Sbjct: 455 aatctaagcngaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 396
Query: 240 gagctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtggg 299
|||||||||||| ||||| ||||| || ||||| || |||||||| ||||||||||||||
Sbjct: 395 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 336
Query: 300 cttcttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgtt 359
|||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 335 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgtt 276
Query: 360 gatgaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctg 419
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 275 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 216
Query: 420 cttcagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||| |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 215 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 158
Score = 75.8 bits (38), Expect = 3e-011
Identities = 92/110 (83%), Gaps = 10/110 (9%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| ||||||||||||||||||||| ||||||| ||| |
Sbjct: 109 gggagacgcttctccgccttgggcttcttccccgccaaggccttctcggccttctccgcc 50
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgcctt 623
||||||||||||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 49 gcgggctcctcctccgcgggcttcttcgccgccgg-ttcttctccgcctt 1
>gb|AU082408.1|AU082408 AU082408 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30641, mRNA sequence
Length = 688
Score = 392 bits (198), Expect = e-107
Identities = 273/298 (91%)
Strand = Plus / Minus
Query: 180 aatctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggc 239
|||||||| || |||||||| || || |||||||||||||| ||||| |||||||||||
Sbjct: 521 aatctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 462
Query: 240 gagctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtggg 299
|||||||||||| ||||| ||||| || ||||| || |||||||| ||||||||||||||
Sbjct: 461 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 402
Query: 300 cttcttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgtt 359
|||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 401 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgtt 342
Query: 360 gatgaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctg 419
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 341 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 282
Query: 420 cttcagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||| |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 281 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 224
Score = 107 bits (54), Expect = 8e-021
Identities = 108/126 (85%), Gaps = 10/126 (7%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| ||||||||||||||||||||| |||||||| ||| |
Sbjct: 175 gggagacgcttctccgccttgggcttcttccccgccagggccttctcggccttctccgcc 116
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgcctt-gggcgccat 632
||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 115 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttggggcgccat 56
Query: 633 cgatgc 638
|||||
Sbjct: 55 ggatgc 50
>gb|AU097679.1|AU097679 AU097679 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0573, mRNA sequence
Length = 690
Score = 392 bits (198), Expect = e-107
Identities = 273/298 (91%)
Strand = Plus / Minus
Query: 180 aatctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggc 239
|||||||| || |||||||| || || |||||||||||||| ||||| |||||||||||
Sbjct: 517 aatctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 458
Query: 240 gagctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtggg 299
|||||||||||| ||||| ||||| || ||||| || |||||||| ||||||||||||||
Sbjct: 457 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 398
Query: 300 cttcttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgtt 359
|||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 397 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgtt 338
Query: 360 gatgaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctg 419
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 337 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 278
Query: 420 cttcagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||| |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 277 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 220
Score = 83.8 bits (42), Expect = 1e-013
Identities = 104/125 (83%), Gaps = 10/125 (8%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| ||||||||||||||||||||| |||||||| ||| |
Sbjct: 172 gggagacgcttctccgccttgggcttcttccccgccagggccttctcggccttctccgcc 113
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||| ||||| ||||||||||| | ||||||||||||| ||||||||||||
Sbjct: 112 gcgggctcctc-tccgcgggcttcttcgccgncggcttcttctcccgcttgggcgccatg 54
Query: 634 gatgc 638
|||||
Sbjct: 53 gatgc 49
>gb|CV728820.1|CV728820 FLO--01-F13.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--01-F13,
mRNA sequence
Length = 472
Score = 392 bits (198), Expect = e-107
Identities = 273/298 (91%)
Strand = Plus / Plus
Query: 180 aatctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggc 239
|||||||| || |||||||| || || |||||||||||||| ||||| |||||||||||
Sbjct: 158 aatctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 217
Query: 240 gagctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtggg 299
|||||||||||| ||||| ||||| || ||||| || |||||||| ||||||||||||||
Sbjct: 218 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 277
Query: 300 cttcttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgtt 359
|||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 278 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgtt 337
Query: 360 gatgaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctg 419
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 338 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 397
Query: 420 cttcagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||| |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 398 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 455
>dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0009G03
Length = 163526
Score = 392 bits (198), Expect = e-107
Identities = 273/298 (91%)
Strand = Plus / Plus
Query: 180 aatctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggc 239
|||||||| || |||||||| || || |||||||||||||| ||||| |||||||||||
Sbjct: 124909 aatctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 124968
Query: 240 gagctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtggg 299
|||||||||||| ||||| ||||| || ||||| || |||||||| ||||||||||||||
Sbjct: 124969 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 125028
Query: 300 cttcttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgtt 359
|||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 125029 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgtt 125088
Query: 360 gatgaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctg 419
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 125089 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 125148
Query: 420 cttcagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||| |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 125149 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 125206
Score = 387 bits (195), Expect = e-105
Identities = 270/295 (91%)
Strand = Plus / Plus
Query: 183 ctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgag 242
|||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 162275 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 162334
Query: 243 ctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggctt 302
||||||||| ||||| ||||| || | ||| || |||||||| |||||||||||||||||
Sbjct: 162335 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 162394
Query: 303 cttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgat 362
|||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 162395 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 162454
Query: 363 gaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgctt 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 162455 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 162514
Query: 423 cagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||||||||| || ||||||| ||||||||
Sbjct: 162515 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 162569
Score = 377 bits (190), Expect = e-102
Identities = 259/282 (91%)
Strand = Plus / Plus
Query: 196 aacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccgggaagg 255
||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 149349 aacttggtgacggccttcgtgccctcggagacggcgtgcttggcgagctcgccggggagg 149408
Query: 256 acaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtagcgc 315
|| ||||| || ||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 149409 acgaggcggacggaggtctgaatctcccgggaggtgatggtgggcttcttgttgtagcgg 149468
Query: 316 gcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttcatg 375
|| |||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149469 gcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttcatg 149528
Query: 376 atggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttgaag 435
||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 149529 atggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttgaag 149588
Query: 436 atgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||| || ||||||| ||||||||
Sbjct: 149589 atgtagatcttgtaggtctcgacgctcttcttccccttcttc 149630
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Plus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 142733 gtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 142792
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || | ||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 142793 aggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgtag 142852
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
||||| |||||||| | ||| |||||||||||||||||||| || |||||||||||||||
Sbjct: 142853 cgcgcgagcttggcggactctccggcgagcttctcgaagatatcattgatgaaggagttc 142912
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 142913 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 142972
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 142973 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 143017
Score = 137 bits (69), Expect = 9e-030
Identities = 110/125 (88%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
|||||||||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 143066 gggaggcgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 143125
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 143126 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatg 143185
Query: 634 gatgc 638
|||||
Sbjct: 143186 gatgc 143190
Score = 129 bits (65), Expect = 2e-027
Identities = 109/125 (87%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 162618 gggagacgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 162677
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 162678 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 162737
Query: 634 gatgc 638
|||||
Sbjct: 162738 gatgc 162742
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 149679 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctctgcc 149738
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 149739 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 149798
Query: 634 gatgc 638
|||||
Sbjct: 149799 gatgc 149803
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| ||||||||||||||||||||| |||||||| ||| |
Sbjct: 125255 gggagacgcttctccgccttgggcttcttccccgccagggccttctcggccttctccgcc 125314
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 125315 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatg 125374
Query: 634 gatgc 638
|||||
Sbjct: 125375 gatgc 125379
>dbj|AP003045.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0030H07
Length = 168253
Score = 392 bits (198), Expect = e-107
Identities = 273/298 (91%)
Strand = Plus / Plus
Query: 180 aatctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggc 239
|||||||| || |||||||| || || |||||||||||||| ||||| |||||||||||
Sbjct: 26230 aatctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 26289
Query: 240 gagctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtggg 299
|||||||||||| ||||| ||||| || ||||| || |||||||| ||||||||||||||
Sbjct: 26290 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 26349
Query: 300 cttcttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgtt 359
|||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 26350 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgtt 26409
Query: 360 gatgaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctg 419
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 26410 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 26469
Query: 420 cttcagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||| |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 26470 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 26527
Score = 387 bits (195), Expect = e-105
Identities = 270/295 (91%)
Strand = Plus / Plus
Query: 183 ctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgag 242
|||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 63596 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 63655
Query: 243 ctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggctt 302
||||||||| ||||| ||||| || | ||| || |||||||| |||||||||||||||||
Sbjct: 63656 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 63715
Query: 303 cttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgat 362
|||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 63716 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 63775
Query: 363 gaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgctt 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 63776 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 63835
Query: 423 cagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||||||||| || ||||||| ||||||||
Sbjct: 63836 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 63890
Score = 377 bits (190), Expect = e-102
Identities = 259/282 (91%)
Strand = Plus / Plus
Query: 196 aacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccgggaagg 255
||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 50670 aacttggtgacggccttcgtgccctcggagacggcgtgcttggcgagctcgccggggagg 50729
Query: 256 acaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtagcgc 315
|| ||||| || ||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 50730 acgaggcggacggaggtctgaatctcccgggaggtgatggtgggcttcttgttgtagcgg 50789
Query: 316 gcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttcatg 375
|| |||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50790 gcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttcatg 50849
Query: 376 atggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttgaag 435
||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 50850 atggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttgaag 50909
Query: 436 atgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||| || ||||||| ||||||||
Sbjct: 50910 atgtagatcttgtaggtctcgacgctcttcttccccttcttc 50951
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| || || |||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 78643 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 78584
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 78583 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 78524
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 78523 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 78464
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 78463 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 78404
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 78403 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 78359
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Plus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 44054 gtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 44113
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || | ||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 44114 aggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgtag 44173
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
||||| |||||||| | ||| |||||||||||||||||||| || |||||||||||||||
Sbjct: 44174 cgcgcgagcttggcggactctccggcgagcttctcgaagatatcattgatgaaggagttc 44233
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 44234 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 44293
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 44294 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 44338
Score = 137 bits (69), Expect = 9e-030
Identities = 110/125 (88%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
|||||||||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 44387 gggaggcgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 44446
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 44447 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatg 44506
Query: 634 gatgc 638
|||||
Sbjct: 44507 gatgc 44511
Score = 129 bits (65), Expect = 2e-027
Identities = 109/125 (87%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 63939 gggagacgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 63998
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 63999 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 64058
Query: 634 gatgc 638
|||||
Sbjct: 64059 gatgc 64063
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| ||||||||||||||||| |||||||||||| ||| |
Sbjct: 78304 gggagccgcttctccgccttgggcttcttcccggccggggccttctcggccttctccgcc 78245
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 78244 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 78185
Query: 634 gatgc 638
|||||
Sbjct: 78184 gatgc 78180
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 51000 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctctgcc 51059
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 51060 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 51119
Query: 634 gatgc 638
|||||
Sbjct: 51120 gatgc 51124
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| ||||||||||||||||||||| |||||||| ||| |
Sbjct: 26576 gggagacgcttctccgccttgggcttcttccccgccagggccttctcggccttctccgcc 26635
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 26636 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatg 26695
Query: 634 gatgc 638
|||||
Sbjct: 26696 gatgc 26700
>gb|AACV01000209.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000209, whole
genome shotgun sequence
Length = 13647
Score = 392 bits (198), Expect = e-107
Identities = 273/298 (91%)
Strand = Plus / Minus
Query: 180 aatctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggc 239
|||||||| || |||||||| || || |||||||||||||| ||||| |||||||||||
Sbjct: 1849 aatctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 1790
Query: 240 gagctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtggg 299
|||||||||||| ||||| ||||| || ||||| || |||||||| ||||||||||||||
Sbjct: 1789 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 1730
Query: 300 cttcttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgtt 359
|||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 1729 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgtt 1670
Query: 360 gatgaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctg 419
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1669 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 1610
Query: 420 cttcagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||| |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 1609 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 1552
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| ||||||||||||||||||||| |||||||| ||| |
Sbjct: 1503 gggagacgcttctccgccttgggcttcttccccgccagggccttctcggccttctccgcc 1444
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1443 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatg 1384
Query: 634 gatgc 638
|||||
Sbjct: 1383 gatgc 1379
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 392 bits (198), Expect = e-107
Identities = 273/298 (91%)
Strand = Plus / Plus
Query: 180 aatctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggc 239
|||||||| || |||||||| || || |||||||||||||| ||||| |||||||||||
Sbjct: 2817034 aatctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 2817093
Query: 240 gagctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtggg 299
|||||||||||| ||||| ||||| || ||||| || |||||||| ||||||||||||||
Sbjct: 2817094 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 2817153
Query: 300 cttcttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgtt 359
|||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 2817154 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgtt 2817213
Query: 360 gatgaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctg 419
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2817214 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 2817273
Query: 420 cttcagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||| |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2817274 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2817331
Score = 391 bits (197), Expect = e-106
Identities = 263/285 (92%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2684055 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 2683996
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 2683995 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 2683936
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| | ||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 2683935 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 2683876
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 2683875 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 2683816
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2683815 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2683771
Score = 387 bits (195), Expect = e-105
Identities = 270/295 (91%)
Strand = Plus / Plus
Query: 183 ctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgag 242
|||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 2854400 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 2854459
Query: 243 ctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggctt 302
||||||||| ||||| ||||| || | ||| || |||||||| |||||||||||||||||
Sbjct: 2854460 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 2854519
Query: 303 cttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgat 362
|||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 2854520 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 2854579
Query: 363 gaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgctt 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2854580 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 2854639
Query: 423 cagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||||||||| || ||||||| ||||||||
Sbjct: 2854640 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 2854694
Score = 377 bits (190), Expect = e-102
Identities = 259/282 (91%)
Strand = Plus / Plus
Query: 196 aacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccgggaagg 255
||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 2841474 aacttggtgacggccttcgtgccctcggagacggcgtgcttggcgagctcgccggggagg 2841533
Query: 256 acaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtagcgc 315
|| ||||| || ||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2841534 acgaggcggacggaggtctgaatctcccgggaggtgatggtgggcttcttgttgtagcgg 2841593
Query: 316 gcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttcatg 375
|| |||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2841594 gcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttcatg 2841653
Query: 376 atggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttgaag 435
||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 2841654 atggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttgaag 2841713
Query: 436 atgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||| || ||||||| ||||||||
Sbjct: 2841714 atgtagatcttgtaggtctcgacgctcttcttccccttcttc 2841755
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| || || |||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 2869447 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 2869388
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 2869387 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2869328
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2869327 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 2869268
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 2869267 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2869208
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2869207 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2869163
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Plus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 2834858 gtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2834917
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || | ||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 2834918 aggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgtag 2834977
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
||||| |||||||| | ||| |||||||||||||||||||| || |||||||||||||||
Sbjct: 2834978 cgcgcgagcttggcggactctccggcgagcttctcgaagatatcattgatgaaggagttc 2835037
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 2835038 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2835097
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2835098 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2835142
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
||||| || |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 2671732 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2671673
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 2671672 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2671613
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| | ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2671612 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 2671553
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 2671552 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 2671493
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2671492 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2671448
Score = 274 bits (138), Expect = 6e-071
Identities = 270/314 (85%)
Strand = Plus / Plus
Query: 184 taagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagc 243
||||| || |||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 36088103 taagacgacgtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcgagc 36088162
Query: 244 tcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttc 303
|||||||| ||||| ||||| || ||||| || ||||| || ||||||||||| ||||||
Sbjct: 36088163 tcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtcggcttc 36088222
Query: 304 ttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatg 363
||||||||||| || || ||| ||||| |||||||||||||||||| |||||||||
Sbjct: 36088223 ttgttgtagcgggcgagacgggcggcctcctgggcgagcttctcgaagatatcgttgatg 36088282
Query: 364 aaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgcttc 423
|| ||||||||||| |||||||||||||| || || ||||| ||||| || ||||||||
Sbjct: 36088283 aacgagttcatgatcgacatggccttggacgatatcccgatatcgggatgcacctgcttg 36088342
Query: 424 agcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttcttaccc 483
|| |||||||| ||||||||||| || || || || |||||| ||||||||||| |||
Sbjct: 36088343 aggaccttgaaaatgtagatcttataagtttcgacgctcttcttggccttcttcttcccc 36088402
Query: 484 ttcttgtcgccgcc 497
||||| ||||||||
Sbjct: 36088403 ttcttctcgccgcc 36088416
Score = 272 bits (137), Expect = 2e-070
Identities = 224/253 (88%)
Strand = Plus / Plus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 17500452 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 17500511
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| | ||||| || |||||| | |||||||||||||||||
Sbjct: 17500512 aggacgaggcggacggaggtctagatctcgcgggaggtggcgatgggcttcttgttgtag 17500571
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || || | ||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 17500572 cgggcgaggtgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttc 17500631
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
||||| |||||||||||||| |||||||||||||| ||||| ||||||||||| ||||||
Sbjct: 17500632 atgatcgacatggccttggaggagatgccgatgtccgggtgcacctgcttcaggaccttg 17500691
Query: 433 aagatgtagatct 445
|||||||||||||
Sbjct: 17500692 aagatgtagatct 17500704
Score = 137 bits (69), Expect = 9e-030
Identities = 110/125 (88%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
|||||||||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 2835191 gggaggcgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 2835250
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2835251 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatg 2835310
Query: 634 gatgc 638
|||||
Sbjct: 2835311 gatgc 2835315
Score = 129 bits (65), Expect = 2e-027
Identities = 109/125 (87%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 2854743 gggagacgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 2854802
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2854803 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 2854862
Query: 634 gatgc 638
|||||
Sbjct: 2854863 gatgc 2854867
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| ||||||||||||||||| |||||||||||| ||| |
Sbjct: 2869108 gggagccgcttctccgccttgggcttcttcccggccggggccttctcggccttctccgcc 2869049
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2869048 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 2868989
Query: 634 gatgc 638
|||||
Sbjct: 2868988 gatgc 2868984
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 2841804 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctctgcc 2841863
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2841864 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 2841923
Query: 634 gatgc 638
|||||
Sbjct: 2841924 gatgc 2841928
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| ||||||||||||||||||||| |||||||| ||| |
Sbjct: 2817380 gggagacgcttctccgccttgggcttcttccccgccagggccttctcggccttctccgcc 2817439
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2817440 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatg 2817499
Query: 634 gatgc 638
|||||
Sbjct: 2817500 gatgc 2817504
Score = 121 bits (61), Expect = 5e-025
Identities = 114/133 (85%), Gaps = 9/133 (6%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 2671399 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctccgcc 2671340
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 2671339 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgccttgggcgccatg 2671280
Query: 634 gatgcggctgctg 646
||||| |||||||
Sbjct: 2671279 gatgccgctgctg 2671267
Score = 119 bits (60), Expect = 2e-024
Identities = 113/132 (85%), Gaps = 9/132 (6%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 2683722 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctccgct 2683663
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2683662 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 2683603
Query: 634 gatgcggctgct 645
| ||| ||||||
Sbjct: 2683602 gctgccgctgct 2683591
Score = 65.9 bits (33), Expect = 3e-008
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 582 ctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatcg 634
||||||| | ||||||||| | || ||||||||||||||||||||||||||||
Sbjct: 36088471 ctcctccaccggcttcttctccgcgggcttcttctccgccttgggcgccatcg 36088523
Score = 65.9 bits (33), Expect = 3e-008
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 340 agcttctcgaagatgtcgttgatgaaggagttcatgatggacatggcct 388
||||||||||| | ||||||||||||||| |||||||| ||||||||||
Sbjct: 31022797 agcttctcgaaaacgtcgttgatgaaggatttcatgatagacatggcct 31022845
Score = 54.0 bits (27), Expect = 1e-004
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 592 ggcttcttcgcagccggcttcttctccgccttgggcgccatcg 634
||||||||| | ||||||||||||| ||||||||||||||||
Sbjct: 17500800 ggcttcttctccaccggcttcttctctgccttgggcgccatcg 17500842
Score = 52.0 bits (26), Expect = 4e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 529 cgcttctcggccttgggcttcttccccgcc 558
|||||||||||||||||||||||| |||||
Sbjct: 36088439 cgcttctcggccttgggcttcttctccgcc 36088468
Score = 52.0 bits (26), Expect = 4e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 462 cttcttcgccttcttcttacccttcttgtcgccg 495
|||||||||||||||| | |||||||||||||||
Sbjct: 17500712 cttcttcgccttcttcctccccttcttgtcgccg 17500745
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 418 tgcttcagcaccttgaagatgtagatcttgta 449
|||||| ||||||||||||||| |||||||||
Sbjct: 30557189 tgcttctgcaccttgaagatgttgatcttgta 30557158
Score = 46.1 bits (23), Expect = 0.025
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 426 caccttgaagatgtagatcttgtaggt 452
|||||||||||||||||||| ||||||
Sbjct: 20130056 caccttgaagatgtagatctcgtaggt 20130030
Score = 46.1 bits (23), Expect = 0.025
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 424 agcaccttgaagatgtagatcttgtag 450
|||||||||||||| ||||||||||||
Sbjct: 12267585 agcaccttgaagatatagatcttgtag 12267559
Score = 42.1 bits (21), Expect = 0.39
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 419 gcttcagcaccttgaagatgtagatcttgtaggtctc 455
||||| |||||| || ||||||||||||||||||||
Sbjct: 20130107 gcttctgcacctataaaatgtagatcttgtaggtctc 20130071
Score = 42.1 bits (21), Expect = 0.39
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 343 ttctcgaagatgtcgttgatgaaggagtt 371
|||| |||||||||||||||||| |||||
Sbjct: 78061 ttcttgaagatgtcgttgatgaatgagtt 78089
>ref|NT_036312.3| Oryza sativa (japonica cultivar-group)
Length = 10050053
Score = 392 bits (198), Expect = e-107
Identities = 273/298 (91%)
Strand = Plus / Plus
Query: 180 aatctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggc 239
|||||||| || |||||||| || || |||||||||||||| ||||| |||||||||||
Sbjct: 2817034 aatctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 2817093
Query: 240 gagctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtggg 299
|||||||||||| ||||| ||||| || ||||| || |||||||| ||||||||||||||
Sbjct: 2817094 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 2817153
Query: 300 cttcttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgtt 359
|||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 2817154 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgtt 2817213
Query: 360 gatgaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctg 419
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2817214 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 2817273
Query: 420 cttcagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||| |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2817274 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2817331
Score = 391 bits (197), Expect = e-106
Identities = 263/285 (92%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2684055 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 2683996
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 2683995 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 2683936
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| | ||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 2683935 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 2683876
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 2683875 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 2683816
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2683815 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2683771
Score = 387 bits (195), Expect = e-105
Identities = 270/295 (91%)
Strand = Plus / Plus
Query: 183 ctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgag 242
|||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 2854400 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 2854459
Query: 243 ctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggctt 302
||||||||| ||||| ||||| || | ||| || |||||||| |||||||||||||||||
Sbjct: 2854460 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 2854519
Query: 303 cttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgat 362
|||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 2854520 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 2854579
Query: 363 gaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgctt 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2854580 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 2854639
Query: 423 cagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||||||||| || ||||||| ||||||||
Sbjct: 2854640 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 2854694
Score = 377 bits (190), Expect = e-102
Identities = 259/282 (91%)
Strand = Plus / Plus
Query: 196 aacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccgggaagg 255
||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 2841474 aacttggtgacggccttcgtgccctcggagacggcgtgcttggcgagctcgccggggagg 2841533
Query: 256 acaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtagcgc 315
|| ||||| || ||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2841534 acgaggcggacggaggtctgaatctcccgggaggtgatggtgggcttcttgttgtagcgg 2841593
Query: 316 gcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttcatg 375
|| |||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2841594 gcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttcatg 2841653
Query: 376 atggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttgaag 435
||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 2841654 atggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttgaag 2841713
Query: 436 atgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||| || ||||||| ||||||||
Sbjct: 2841714 atgtagatcttgtaggtctcgacgctcttcttccccttcttc 2841755
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| || || |||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 2869447 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 2869388
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 2869387 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2869328
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2869327 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 2869268
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 2869267 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2869208
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2869207 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2869163
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Plus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 2834858 gtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2834917
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || | ||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 2834918 aggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgtag 2834977
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
||||| |||||||| | ||| |||||||||||||||||||| || |||||||||||||||
Sbjct: 2834978 cgcgcgagcttggcggactctccggcgagcttctcgaagatatcattgatgaaggagttc 2835037
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 2835038 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2835097
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2835098 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2835142
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
||||| || |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 2671732 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2671673
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 2671672 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2671613
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| | ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2671612 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 2671553
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 2671552 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 2671493
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2671492 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2671448
Score = 137 bits (69), Expect = 9e-030
Identities = 110/125 (88%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
|||||||||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 2835191 gggaggcgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 2835250
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2835251 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatg 2835310
Query: 634 gatgc 638
|||||
Sbjct: 2835311 gatgc 2835315
Score = 129 bits (65), Expect = 2e-027
Identities = 109/125 (87%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 2854743 gggagacgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 2854802
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2854803 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 2854862
Query: 634 gatgc 638
|||||
Sbjct: 2854863 gatgc 2854867
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| ||||||||||||||||| |||||||||||| ||| |
Sbjct: 2869108 gggagccgcttctccgccttgggcttcttcccggccggggccttctcggccttctccgcc 2869049
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2869048 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 2868989
Query: 634 gatgc 638
|||||
Sbjct: 2868988 gatgc 2868984
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 2841804 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctctgcc 2841863
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2841864 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 2841923
Query: 634 gatgc 638
|||||
Sbjct: 2841924 gatgc 2841928
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| ||||||||||||||||||||| |||||||| ||| |
Sbjct: 2817380 gggagacgcttctccgccttgggcttcttccccgccagggccttctcggccttctccgcc 2817439
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2817440 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatg 2817499
Query: 634 gatgc 638
|||||
Sbjct: 2817500 gatgc 2817504
Score = 121 bits (61), Expect = 5e-025
Identities = 114/133 (85%), Gaps = 9/133 (6%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 2671399 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctccgcc 2671340
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 2671339 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgccttgggcgccatg 2671280
Query: 634 gatgcggctgctg 646
||||| |||||||
Sbjct: 2671279 gatgccgctgctg 2671267
Score = 119 bits (60), Expect = 2e-024
Identities = 113/132 (85%), Gaps = 9/132 (6%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 2683722 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctccgct 2683663
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2683662 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 2683603
Query: 634 gatgcggctgct 645
| ||| ||||||
Sbjct: 2683602 gctgccgctgct 2683591
Score = 42.1 bits (21), Expect = 0.39
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 343 ttctcgaagatgtcgttgatgaaggagtt 371
|||| |||||||||||||||||| |||||
Sbjct: 78061 ttcttgaagatgtcgttgatgaatgagtt 78089
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 392 bits (198), Expect = e-107
Identities = 273/298 (91%)
Strand = Plus / Plus
Query: 180 aatctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggc 239
|||||||| || |||||||| || || |||||||||||||| ||||| |||||||||||
Sbjct: 2874187 aatctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 2874246
Query: 240 gagctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtggg 299
|||||||||||| ||||| ||||| || ||||| || |||||||| ||||||||||||||
Sbjct: 2874247 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 2874306
Query: 300 cttcttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgtt 359
|||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 2874307 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgtt 2874366
Query: 360 gatgaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctg 419
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2874367 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 2874426
Query: 420 cttcagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||| |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2874427 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2874484
Score = 391 bits (197), Expect = e-106
Identities = 263/285 (92%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2743495 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 2743436
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 2743435 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 2743376
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| | ||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 2743375 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 2743316
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 2743315 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 2743256
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2743255 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2743211
Score = 387 bits (195), Expect = e-105
Identities = 270/295 (91%)
Strand = Plus / Plus
Query: 183 ctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgag 242
|||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 2914337 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 2914396
Query: 243 ctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggctt 302
||||||||| ||||| ||||| || | ||| || |||||||| |||||||||||||||||
Sbjct: 2914397 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 2914456
Query: 303 cttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgat 362
|||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 2914457 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 2914516
Query: 363 gaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgctt 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2914517 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 2914576
Query: 423 cagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||||||||| || ||||||| ||||||||
Sbjct: 2914577 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 2914631
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| || || |||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 2929384 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 2929325
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 2929324 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2929265
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2929264 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 2929205
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 2929204 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2929145
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2929144 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2929100
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Plus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 2894848 gtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2894907
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || | ||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 2894908 aggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgtag 2894967
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
||||| |||||||| | ||| |||||||||||||||||||| || |||||||||||||||
Sbjct: 2894968 cgcgcgagcttggcggactctccggcgagcttctcgaagatatcattgatgaaggagttc 2895027
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 2895028 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2895087
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2895088 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2895132
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
||||| || |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 2730986 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2730927
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 2730926 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2730867
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| | ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2730866 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 2730807
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 2730806 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 2730747
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2730746 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2730702
Score = 137 bits (69), Expect = 9e-030
Identities = 110/125 (88%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
|||||||||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 2895181 gggaggcgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 2895240
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2895241 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatg 2895300
Query: 634 gatgc 638
|||||
Sbjct: 2895301 gatgc 2895305
Score = 129 bits (65), Expect = 2e-027
Identities = 109/125 (87%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 2914680 gggagacgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 2914739
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2914740 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 2914799
Query: 634 gatgc 638
|||||
Sbjct: 2914800 gatgc 2914804
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| ||||||||||||||||| |||||||||||| ||| |
Sbjct: 2929045 gggagccgcttctccgccttgggcttcttcccggccggggccttctcggccttctccgcc 2928986
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2928985 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 2928926
Query: 634 gatgc 638
|||||
Sbjct: 2928925 gatgc 2928921
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 2901738 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctctgcc 2901797
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2901798 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 2901857
Query: 634 gatgc 638
|||||
Sbjct: 2901858 gatgc 2901862
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| ||||||||||||||||||||| |||||||| ||| |
Sbjct: 2874533 gggagacgcttctccgccttgggcttcttccccgccagggccttctcggccttctccgcc 2874592
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2874593 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatg 2874652
Query: 634 gatgc 638
|||||
Sbjct: 2874653 gatgc 2874657
Score = 121 bits (61), Expect = 5e-025
Identities = 114/133 (85%), Gaps = 9/133 (6%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 2730653 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctccgcc 2730594
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 2730593 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgccttgggcgccatg 2730534
Query: 634 gatgcggctgctg 646
||||| |||||||
Sbjct: 2730533 gatgccgctgctg 2730521
Score = 119 bits (60), Expect = 2e-024
Identities = 113/132 (85%), Gaps = 9/132 (6%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 2743162 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctccgct 2743103
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2743102 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 2743043
Query: 634 gatgcggctgct 645
| ||| ||||||
Sbjct: 2743042 gctgccgctgct 2743031
Score = 73.8 bits (37), Expect = 1e-010
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 403 atgtcggggtggacctgcttcagcaccttgaagatgtagatcttgtaggtctc 455
||||||||||| || ||||| ||||||||||||||||||||||||||||||||
Sbjct: 2901616 atgtcggggtgaac-tgcttgagcaccttgaagatgtagatcttgtaggtctc 2901667
Score = 69.9 bits (35), Expect = 2e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 196 aacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcg 246
||||| ||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 2901465 aacttggtgacggccttcgtgccctcggagacggcgtgcttggcgagctcg 2901515
Score = 42.1 bits (21), Expect = 0.39
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 343 ttctcgaagatgtcgttgatgaaggagtt 371
|||| |||||||||||||||||| |||||
Sbjct: 75413 ttcttgaagatgtcgttgatgaatgagtt 75441
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 392 bits (198), Expect = e-107
Identities = 273/298 (91%)
Strand = Plus / Plus
Query: 180 aatctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggc 239
|||||||| || |||||||| || || |||||||||||||| ||||| |||||||||||
Sbjct: 2874187 aatctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 2874246
Query: 240 gagctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtggg 299
|||||||||||| ||||| ||||| || ||||| || |||||||| ||||||||||||||
Sbjct: 2874247 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 2874306
Query: 300 cttcttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgtt 359
|||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 2874307 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgtt 2874366
Query: 360 gatgaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctg 419
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2874367 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 2874426
Query: 420 cttcagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||| |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2874427 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2874484
Score = 391 bits (197), Expect = e-106
Identities = 263/285 (92%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2743495 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 2743436
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 2743435 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 2743376
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| | ||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 2743375 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 2743316
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 2743315 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 2743256
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2743255 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2743211
Score = 387 bits (195), Expect = e-105
Identities = 270/295 (91%)
Strand = Plus / Plus
Query: 183 ctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgag 242
|||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 2914337 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 2914396
Query: 243 ctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggctt 302
||||||||| ||||| ||||| || | ||| || |||||||| |||||||||||||||||
Sbjct: 2914397 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 2914456
Query: 303 cttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgat 362
|||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 2914457 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 2914516
Query: 363 gaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgctt 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2914517 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 2914576
Query: 423 cagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||||||||| || ||||||| ||||||||
Sbjct: 2914577 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 2914631
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| || || |||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 2929384 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 2929325
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 2929324 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2929265
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2929264 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 2929205
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 2929204 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2929145
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2929144 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2929100
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Plus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 2894848 gtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2894907
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || | ||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 2894908 aggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgtag 2894967
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
||||| |||||||| | ||| |||||||||||||||||||| || |||||||||||||||
Sbjct: 2894968 cgcgcgagcttggcggactctccggcgagcttctcgaagatatcattgatgaaggagttc 2895027
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 2895028 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2895087
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2895088 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2895132
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
||||| || |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 2730986 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2730927
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 2730926 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2730867
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| | ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2730866 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 2730807
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 2730806 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 2730747
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2730746 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2730702
Score = 274 bits (138), Expect = 6e-071
Identities = 270/314 (85%)
Strand = Plus / Plus
Query: 184 taagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagc 243
||||| || |||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 35483371 taagacgacgtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcgagc 35483430
Query: 244 tcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttc 303
|||||||| ||||| ||||| || ||||| || ||||| || ||||||||||| ||||||
Sbjct: 35483431 tcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtcggcttc 35483490
Query: 304 ttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatg 363
||||||||||| || || ||| ||||| |||||||||||||||||| |||||||||
Sbjct: 35483491 ttgttgtagcgggcgagacgggcggcctcctgggcgagcttctcgaagatatcgttgatg 35483550
Query: 364 aaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgcttc 423
|| ||||||||||| |||||||||||||| || || ||||| ||||| || ||||||||
Sbjct: 35483551 aacgagttcatgatcgacatggccttggacgatatcccgatatcgggatgcacctgcttg 35483610
Query: 424 agcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttcttaccc 483
|| |||||||| ||||||||||| || || || || |||||| ||||||||||| |||
Sbjct: 35483611 aggaccttgaaaatgtagatcttataagtttcgacgctcttcttggccttcttcttcccc 35483670
Query: 484 ttcttgtcgccgcc 497
||||| ||||||||
Sbjct: 35483671 ttcttctcgccgcc 35483684
Score = 272 bits (137), Expect = 2e-070
Identities = 224/253 (88%)
Strand = Plus / Plus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 17079155 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 17079214
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| | ||||| || |||||| | |||||||||||||||||
Sbjct: 17079215 aggacgaggcggacggaggtctagatctcgcgggaggtggcgatgggcttcttgttgtag 17079274
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || || | ||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 17079275 cgggcgaggtgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttc 17079334
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
||||| |||||||||||||| |||||||||||||| ||||| ||||||||||| ||||||
Sbjct: 17079335 atgatcgacatggccttggaggagatgccgatgtccgggtgcacctgcttcaggaccttg 17079394
Query: 433 aagatgtagatct 445
|||||||||||||
Sbjct: 17079395 aagatgtagatct 17079407
Score = 137 bits (69), Expect = 9e-030
Identities = 110/125 (88%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
|||||||||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 2895181 gggaggcgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 2895240
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2895241 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatg 2895300
Query: 634 gatgc 638
|||||
Sbjct: 2895301 gatgc 2895305
Score = 129 bits (65), Expect = 2e-027
Identities = 109/125 (87%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 2914680 gggagacgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 2914739
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2914740 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 2914799
Query: 634 gatgc 638
|||||
Sbjct: 2914800 gatgc 2914804
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| ||||||||||||||||| |||||||||||| ||| |
Sbjct: 2929045 gggagccgcttctccgccttgggcttcttcccggccggggccttctcggccttctccgcc 2928986
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2928985 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 2928926
Query: 634 gatgc 638
|||||
Sbjct: 2928925 gatgc 2928921
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 2901738 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctctgcc 2901797
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2901798 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 2901857
Query: 634 gatgc 638
|||||
Sbjct: 2901858 gatgc 2901862
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| ||||||||||||||||||||| |||||||| ||| |
Sbjct: 2874533 gggagacgcttctccgccttgggcttcttccccgccagggccttctcggccttctccgcc 2874592
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2874593 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatg 2874652
Query: 634 gatgc 638
|||||
Sbjct: 2874653 gatgc 2874657
Score = 121 bits (61), Expect = 5e-025
Identities = 114/133 (85%), Gaps = 9/133 (6%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 2730653 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctccgcc 2730594
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 2730593 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgccttgggcgccatg 2730534
Query: 634 gatgcggctgctg 646
||||| |||||||
Sbjct: 2730533 gatgccgctgctg 2730521
Score = 119 bits (60), Expect = 2e-024
Identities = 113/132 (85%), Gaps = 9/132 (6%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 2743162 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctccgct 2743103
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2743102 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 2743043
Query: 634 gatgcggctgct 645
| ||| ||||||
Sbjct: 2743042 gctgccgctgct 2743031
Score = 73.8 bits (37), Expect = 1e-010
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 403 atgtcggggtggacctgcttcagcaccttgaagatgtagatcttgtaggtctc 455
||||||||||| || ||||| ||||||||||||||||||||||||||||||||
Sbjct: 2901616 atgtcggggtgaac-tgcttgagcaccttgaagatgtagatcttgtaggtctc 2901667
Score = 69.9 bits (35), Expect = 2e-009
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 196 aacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcg 246
||||| ||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 2901465 aacttggtgacggccttcgtgccctcggagacggcgtgcttggcgagctcg 2901515
Score = 65.9 bits (33), Expect = 3e-008
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 582 ctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatcg 634
||||||| | ||||||||| | || ||||||||||||||||||||||||||||
Sbjct: 35483739 ctcctccaccggcttcttctccgcgggcttcttctccgccttgggcgccatcg 35483791
Score = 65.9 bits (33), Expect = 3e-008
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 340 agcttctcgaagatgtcgttgatgaaggagttcatgatggacatggcct 388
||||||||||| | ||||||||||||||| |||||||| ||||||||||
Sbjct: 30573944 agcttctcgaaaacgtcgttgatgaaggatttcatgatagacatggcct 30573992
Score = 54.0 bits (27), Expect = 1e-004
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 592 ggcttcttcgcagccggcttcttctccgccttgggcgccatcg 634
||||||||| | ||||||||||||| ||||||||||||||||
Sbjct: 17079503 ggcttcttctccaccggcttcttctctgccttgggcgccatcg 17079545
Score = 52.0 bits (26), Expect = 4e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 529 cgcttctcggccttgggcttcttccccgcc 558
|||||||||||||||||||||||| |||||
Sbjct: 35483707 cgcttctcggccttgggcttcttctccgcc 35483736
Score = 52.0 bits (26), Expect = 4e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 462 cttcttcgccttcttcttacccttcttgtcgccg 495
|||||||||||||||| | |||||||||||||||
Sbjct: 17079415 cttcttcgccttcttcctccccttcttgtcgccg 17079448
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 418 tgcttcagcaccttgaagatgtagatcttgta 449
|||||| ||||||||||||||| |||||||||
Sbjct: 30140117 tgcttctgcaccttgaagatgttgatcttgta 30140086
Score = 46.1 bits (23), Expect = 0.025
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 426 caccttgaagatgtagatcttgtaggt 452
|||||||||||||||||||| ||||||
Sbjct: 19722175 caccttgaagatgtagatctcgtaggt 19722149
Score = 46.1 bits (23), Expect = 0.025
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 424 agcaccttgaagatgtagatcttgtag 450
|||||||||||||| ||||||||||||
Sbjct: 12266809 agcaccttgaagatatagatcttgtag 12266783
Score = 42.1 bits (21), Expect = 0.39
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 419 gcttcagcaccttgaagatgtagatcttgtaggtctc 455
||||| |||||| || ||||||||||||||||||||
Sbjct: 19722226 gcttctgcacctataaaatgtagatcttgtaggtctc 19722190
Score = 42.1 bits (21), Expect = 0.39
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 343 ttctcgaagatgtcgttgatgaaggagtt 371
|||| |||||||||||||||||| |||||
Sbjct: 75413 ttcttgaagatgtcgttgatgaatgagtt 75441
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 392 bits (198), Expect = e-107
Identities = 273/298 (91%)
Strand = Plus / Plus
Query: 180 aatctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggc 239
|||||||| || |||||||| || || |||||||||||||| ||||| |||||||||||
Sbjct: 2819232 aatctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 2819291
Query: 240 gagctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtggg 299
|||||||||||| ||||| ||||| || ||||| || |||||||| ||||||||||||||
Sbjct: 2819292 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 2819351
Query: 300 cttcttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgtt 359
|||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||||||
Sbjct: 2819352 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgtt 2819411
Query: 360 gatgaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctg 419
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2819412 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 2819471
Query: 420 cttcagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||| |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2819472 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2819529
Score = 391 bits (197), Expect = e-106
Identities = 263/285 (92%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2686253 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 2686194
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 2686193 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 2686134
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| | ||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 2686133 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 2686074
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 2686073 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 2686014
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2686013 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2685969
Score = 387 bits (195), Expect = e-105
Identities = 270/295 (91%)
Strand = Plus / Plus
Query: 183 ctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgag 242
|||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 2856598 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 2856657
Query: 243 ctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggctt 302
||||||||| ||||| ||||| || | ||| || |||||||| |||||||||||||||||
Sbjct: 2856658 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 2856717
Query: 303 cttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgat 362
|||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 2856718 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 2856777
Query: 363 gaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgctt 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2856778 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 2856837
Query: 423 cagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||||||||| || ||||||| ||||||||
Sbjct: 2856838 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 2856892
Score = 377 bits (190), Expect = e-102
Identities = 259/282 (91%)
Strand = Plus / Plus
Query: 196 aacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccgggaagg 255
||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 2843672 aacttggtgacggccttcgtgccctcggagacggcgtgcttggcgagctcgccggggagg 2843731
Query: 256 acaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtagcgc 315
|| ||||| || ||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2843732 acgaggcggacggaggtctgaatctcccgggaggtgatggtgggcttcttgttgtagcgg 2843791
Query: 316 gcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttcatg 375
|| |||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2843792 gcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttcatg 2843851
Query: 376 atggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttgaag 435
||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 2843852 atggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttgaag 2843911
Query: 436 atgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||| || ||||||| ||||||||
Sbjct: 2843912 atgtagatcttgtaggtctcgacgctcttcttccccttcttc 2843953
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| || || |||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 2871645 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 2871586
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 2871585 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2871526
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2871525 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 2871466
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 2871465 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2871406
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2871405 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2871361
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Plus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 2837056 gtgaacttggtaacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2837115
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || | ||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 2837116 aggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgtag 2837175
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
||||| |||||||| | ||| |||||||||||||||||||| || |||||||||||||||
Sbjct: 2837176 cgcgcgagcttggcggactctccggcgagcttctcgaagatatcattgatgaaggagttc 2837235
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 2837236 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 2837295
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2837296 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2837340
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
||||| || |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 2673930 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 2673871
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 2673870 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 2673811
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| | ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2673810 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 2673751
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 2673750 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 2673691
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2673690 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 2673646
Score = 274 bits (138), Expect = 6e-071
Identities = 270/314 (85%)
Strand = Plus / Plus
Query: 184 taagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagc 243
||||| || |||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 36007433 taagacgacgtgaacttggtgacggccttggtgccctcagagacggcgtgcttggcgagc 36007492
Query: 244 tcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttc 303
|||||||| ||||| ||||| || ||||| || ||||| || ||||||||||| ||||||
Sbjct: 36007493 tcgccggggaggacgaggcgcaccgaggtctggatctcgcgggaggtgatggtcggcttc 36007552
Query: 304 ttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatg 363
||||||||||| || || ||| ||||| |||||||||||||||||| |||||||||
Sbjct: 36007553 ttgttgtagcgggcgagacgggcggcctcctgggcgagcttctcgaagatatcgttgatg 36007612
Query: 364 aaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgcttc 423
|| ||||||||||| |||||||||||||| || || ||||| ||||| || ||||||||
Sbjct: 36007613 aacgagttcatgatcgacatggccttggacgatatcccgatatcgggatgcacctgcttg 36007672
Query: 424 agcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttcttaccc 483
|| |||||||| ||||||||||| || || || || |||||| ||||||||||| |||
Sbjct: 36007673 aggaccttgaaaatgtagatcttataagtttcgacgctcttcttggccttcttcttcccc 36007732
Query: 484 ttcttgtcgccgcc 497
||||| ||||||||
Sbjct: 36007733 ttcttctcgccgcc 36007746
Score = 272 bits (137), Expect = 2e-070
Identities = 224/253 (88%)
Strand = Plus / Plus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 17421735 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 17421794
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| | ||||| || |||||| | |||||||||||||||||
Sbjct: 17421795 aggacgaggcggacggaggtctagatctcgcgggaggtggcgatgggcttcttgttgtag 17421854
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || || | ||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 17421855 cgggcgaggtgggcggcctcctgcgcgagcttctcgaagatgtcgttgatgaaggagttc 17421914
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
||||| |||||||||||||| |||||||||||||| ||||| ||||||||||| ||||||
Sbjct: 17421915 atgatcgacatggccttggaggagatgccgatgtccgggtgcacctgcttcaggaccttg 17421974
Query: 433 aagatgtagatct 445
|||||||||||||
Sbjct: 17421975 aagatgtagatct 17421987
Score = 137 bits (69), Expect = 9e-030
Identities = 110/125 (88%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
|||||||||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 2837389 gggaggcgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 2837448
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2837449 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatg 2837508
Query: 634 gatgc 638
|||||
Sbjct: 2837509 gatgc 2837513
Score = 129 bits (65), Expect = 2e-027
Identities = 109/125 (87%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 2856941 gggagacgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 2857000
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2857001 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 2857060
Query: 634 gatgc 638
|||||
Sbjct: 2857061 gatgc 2857065
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| ||||||||||||||||| |||||||||||| ||| |
Sbjct: 2871306 gggagccgcttctccgccttgggcttcttcccggccggggccttctcggccttctccgcc 2871247
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2871246 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 2871187
Query: 634 gatgc 638
|||||
Sbjct: 2871186 gatgc 2871182
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 2844002 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctctgcc 2844061
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2844062 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 2844121
Query: 634 gatgc 638
|||||
Sbjct: 2844122 gatgc 2844126
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| ||||||||||||||||||||| |||||||| ||| |
Sbjct: 2819578 gggagacgcttctccgccttgggcttcttccccgccagggccttctcggccttctccgcc 2819637
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2819638 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatg 2819697
Query: 634 gatgc 638
|||||
Sbjct: 2819698 gatgc 2819702
Score = 121 bits (61), Expect = 5e-025
Identities = 114/133 (85%), Gaps = 9/133 (6%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 2673597 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctccgcc 2673538
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 2673537 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgccttgggcgccatg 2673478
Query: 634 gatgcggctgctg 646
||||| |||||||
Sbjct: 2673477 gatgccgctgctg 2673465
Score = 119 bits (60), Expect = 2e-024
Identities = 113/132 (85%), Gaps = 9/132 (6%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 2685920 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctccgct 2685861
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2685860 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 2685801
Query: 634 gatgcggctgct 645
| ||| ||||||
Sbjct: 2685800 gctgccgctgct 2685789
Score = 65.9 bits (33), Expect = 3e-008
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 582 ctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatcg 634
||||||| | ||||||||| | || ||||||||||||||||||||||||||||
Sbjct: 36007801 ctcctccaccggcttcttctccgcgggcttcttctccgccttgggcgccatcg 36007853
Score = 65.9 bits (33), Expect = 3e-008
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 340 agcttctcgaagatgtcgttgatgaaggagttcatgatggacatggcct 388
||||||||||| | ||||||||||||||| |||||||| ||||||||||
Sbjct: 30942127 agcttctcgaaaacgtcgttgatgaaggatttcatgatagacatggcct 30942175
Score = 54.0 bits (27), Expect = 1e-004
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 592 ggcttcttcgcagccggcttcttctccgccttgggcgccatcg 634
||||||||| | ||||||||||||| ||||||||||||||||
Sbjct: 17422083 ggcttcttctccaccggcttcttctctgccttgggcgccatcg 17422125
Score = 52.0 bits (26), Expect = 4e-004
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 529 cgcttctcggccttgggcttcttccccgcc 558
|||||||||||||||||||||||| |||||
Sbjct: 36007769 cgcttctcggccttgggcttcttctccgcc 36007798
Score = 52.0 bits (26), Expect = 4e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 462 cttcttcgccttcttcttacccttcttgtcgccg 495
|||||||||||||||| | |||||||||||||||
Sbjct: 17421995 cttcttcgccttcttcctccccttcttgtcgccg 17422028
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 418 tgcttcagcaccttgaagatgtagatcttgta 449
|||||| ||||||||||||||| |||||||||
Sbjct: 30476519 tgcttctgcaccttgaagatgttgatcttgta 30476488
Score = 46.1 bits (23), Expect = 0.025
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 426 caccttgaagatgtagatcttgtaggt 452
|||||||||||||||||||| ||||||
Sbjct: 20051339 caccttgaagatgtagatctcgtaggt 20051313
Score = 46.1 bits (23), Expect = 0.025
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 424 agcaccttgaagatgtagatcttgtag 450
|||||||||||||| ||||||||||||
Sbjct: 12269803 agcaccttgaagatatagatcttgtag 12269777
Score = 42.1 bits (21), Expect = 0.39
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 419 gcttcagcaccttgaagatgtagatcttgtaggtctc 455
||||| |||||| || ||||||||||||||||||||
Sbjct: 20051390 gcttctgcacctataaaatgtagatcttgtaggtctc 20051354
Score = 42.1 bits (21), Expect = 0.39
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 343 ttctcgaagatgtcgttgatgaaggagtt 371
|||| |||||||||||||||||| |||||
Sbjct: 80259 ttcttgaagatgtcgttgatgaatgagtt 80287
>gb|AU097673.1|AU097673 AU097673 Rice panicle shorter than 3cm Oryza sativa (japonica
cultivar-group) cDNA clone E30833, mRNA sequence
Length = 697
Score = 391 bits (197), Expect = e-106
Identities = 263/285 (92%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 476 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 417
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 416 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 357
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 356 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 297
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 296 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 237
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 236 aagatgtagatcttgtaggtctccacgctcttcttccccttcttc 192
Score = 77.8 bits (39), Expect = 7e-012
Identities = 105/123 (85%), Gaps = 6/123 (4%)
Strand = Plus / Minus
Query: 518 ccgccgggaggcgcttctcggccttgggcttcttcccc---gccggggccttcgcggcag 574
|||| ||||| |||||||| |||||||||||||||||| |||||||||||| | || |
Sbjct: 146 ccgcggggagccgcttctccgccttgggcttcttccccgccgccggggccttctccgccg 87
Query: 575 cgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatcg 634
|||||||||| || ||||||||||| | |||||||||||||| |||||||||||| |
Sbjct: 86 -nggctcctccttcg-gggcttcttcgccg-cggcttcttctccgncttgggcgccatgg 30
Query: 635 atg 637
|||
Sbjct: 29 atg 27
>gb|CB670862.1|CB670862 OSJNEe04C16.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04C16 5', mRNA sequence
Length = 700
Score = 391 bits (197), Expect = e-106
Identities = 263/285 (92%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 512 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 453
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 452 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 393
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| | ||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 392 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 333
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 332 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 273
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 272 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 228
Score = 119 bits (60), Expect = 2e-024
Identities = 113/132 (85%), Gaps = 9/132 (6%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 179 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctccgct 120
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 119 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 60
Query: 634 gatgcggctgct 645
| ||| ||||||
Sbjct: 59 gctgccgctgct 48
>gb|CO436072.1|CO436072 OsMR994 5MT resistant rice mutant cDNA library Oryza sativa
(japonica cultivar-group) cDNA, mRNA sequence
Length = 885
Score = 391 bits (197), Expect = e-106
Identities = 263/285 (92%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 560 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 501
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 500 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 441
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 381
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 380 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 321
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 320 aagatgtagatcttgtaggtctccacgctcttcttccccttcttc 276
Score = 145 bits (73), Expect = 4e-032
Identities = 111/123 (90%), Gaps = 3/123 (2%)
Strand = Plus / Minus
Query: 518 ccgccgggaggcgcttctcggccttgggcttcttccccgccg---gggccttcgcggcag 574
|||| ||||| |||||||| |||||||||||||||||||||| |||||||| | || |
Sbjct: 229 ccgcggggagccgcttctccgccttgggcttcttccccgccgccggggccttctccgccg 170
Query: 575 cgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatcg 634
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 169 cgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatgg 110
Query: 635 atg 637
|||
Sbjct: 109 atg 107
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08,
complete sequence
Length = 119500
Score = 391 bits (197), Expect = e-106
Identities = 263/285 (92%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 27079 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 27020
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 27019 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 26960
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 26959 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 26900
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 26899 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 26840
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 26839 aagatgtagatcttgtaggtctccacgctcttcttccccttcttc 26795
Score = 145 bits (73), Expect = 4e-032
Identities = 111/123 (90%), Gaps = 3/123 (2%)
Strand = Plus / Minus
Query: 518 ccgccgggaggcgcttctcggccttgggcttcttccccgccg---gggccttcgcggcag 574
|||| ||||| |||||||| |||||||||||||||||||||| |||||||| | || |
Sbjct: 26748 ccgcggggagccgcttctccgccttgggcttcttccccgccgccggggccttctccgccg 26689
Query: 575 cgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatcg 634
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 26688 cgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatgg 26629
Query: 635 atg 637
|||
Sbjct: 26628 atg 26626
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10,
complete sequence
Length = 187034
Score = 391 bits (197), Expect = e-106
Identities = 263/285 (92%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 176397 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 176338
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 176337 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 176278
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 176277 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 176218
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 176217 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 176158
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 176157 aagatgtagatcttgtaggtctccacgctcttcttccccttcttc 176113
Score = 145 bits (73), Expect = 4e-032
Identities = 111/123 (90%), Gaps = 3/123 (2%)
Strand = Plus / Minus
Query: 518 ccgccgggaggcgcttctcggccttgggcttcttccccgccg---gggccttcgcggcag 574
|||| ||||| |||||||| |||||||||||||||||||||| |||||||| | || |
Sbjct: 176066 ccgcggggagccgcttctccgccttgggcttcttccccgccgccggggccttctccgccg 176007
Query: 575 cgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatcg 634
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 176006 cgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatgg 175947
Query: 635 atg 637
|||
Sbjct: 175946 atg 175944
>dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0434B04
Length = 167029
Score = 391 bits (197), Expect = e-106
Identities = 263/285 (92%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 136028 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 135969
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 135968 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 135909
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| | ||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 135908 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 135849
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 135848 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 135789
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 135788 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 135744
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
||||| || |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 123705 gtgaatttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 123646
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 123645 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 123586
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| | ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 123585 cgggcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 123526
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||
Sbjct: 123525 atgatggacatggccttggaggagatgccgatatcggggtggacctgcttgagcaccttg 123466
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 123465 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 123421
Score = 121 bits (61), Expect = 5e-025
Identities = 114/133 (85%), Gaps = 9/133 (6%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 123372 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctccgcc 123313
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 123312 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctctgccttgggcgccatg 123253
Query: 634 gatgcggctgctg 646
||||| |||||||
Sbjct: 123252 gatgccgctgctg 123240
Score = 119 bits (60), Expect = 2e-024
Identities = 113/132 (85%), Gaps = 9/132 (6%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 135695 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctccgct 135636
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 135635 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 135576
Query: 634 gatgcggctgct 645
| ||| ||||||
Sbjct: 135575 gctgccgctgct 135564
>gb|AACV01000195.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000195, whole
genome shotgun sequence
Length = 6165
Score = 391 bits (197), Expect = e-106
Identities = 263/285 (92%)
Strand = Plus / Plus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5304 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 5363
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 5364 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 5423
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| | ||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 5424 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 5483
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 5484 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 5543
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 5544 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 5588
Score = 119 bits (60), Expect = 2e-024
Identities = 113/132 (85%), Gaps = 9/132 (6%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 5637 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctccgct 5696
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5697 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 5756
Query: 634 gatgcggctgct 645
| ||| ||||||
Sbjct: 5757 gctgccgctgct 5768
>gb|AACV01012743.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg012743, whole
genome shotgun sequence
Length = 27501
Score = 391 bits (197), Expect = e-106
Identities = 263/285 (92%)
Strand = Plus / Plus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 19997 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 20056
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 20057 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 20116
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 20117 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 20176
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 20177 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 20236
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 20237 aagatgtagatcttgtaggtctccacgctcttcttccccttcttc 20281
Score = 145 bits (73), Expect = 4e-032
Identities = 111/123 (90%), Gaps = 3/123 (2%)
Strand = Plus / Plus
Query: 518 ccgccgggaggcgcttctcggccttgggcttcttccccgccg---gggccttcgcggcag 574
|||| ||||| |||||||| |||||||||||||||||||||| |||||||| | || |
Sbjct: 20328 ccgcggggagccgcttctccgccttgggcttcttccccgccgccggggccttctccgccg 20387
Query: 575 cgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatcg 634
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 20388 cgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatgg 20447
Query: 635 atg 637
|||
Sbjct: 20448 atg 20450
>ref|XM_475912.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 459
Score = 391 bits (197), Expect = e-106
Identities = 263/285 (92%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 449 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 390
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 389 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 330
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 329 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 270
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 269 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 210
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 209 aagatgtagatcttgtaggtctccacgctcttcttccccttcttc 165
Score = 143 bits (72), Expect = 1e-031
Identities = 107/118 (90%), Gaps = 3/118 (2%)
Strand = Plus / Minus
Query: 518 ccgccgggaggcgcttctcggccttgggcttcttccccgccg---gggccttcgcggcag 574
|||| ||||| |||||||| |||||||||||||||||||||| |||||||| | || |
Sbjct: 118 ccgcggggagccgcttctccgccttgggcttcttccccgccgccggggccttctccgccg 59
Query: 575 cgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccat 632
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 58 cgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 1
>ref|NT_107222.1| Oryza sativa (japonica cultivar-group)
Length = 1298239
Score = 391 bits (197), Expect = e-106
Identities = 263/285 (92%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 27079 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 27020
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 27019 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 26960
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 26959 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 26900
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 26899 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 26840
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 26839 aagatgtagatcttgtaggtctccacgctcttcttccccttcttc 26795
Score = 145 bits (73), Expect = 4e-032
Identities = 111/123 (90%), Gaps = 3/123 (2%)
Strand = Plus / Minus
Query: 518 ccgccgggaggcgcttctcggccttgggcttcttccccgccg---gggccttcgcggcag 574
|||| ||||| |||||||| |||||||||||||||||||||| |||||||| | || |
Sbjct: 26748 ccgcggggagccgcttctccgccttgggcttcttccccgccgccggggccttctccgccg 26689
Query: 575 cgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatcg 634
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 26688 cgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatgg 26629
Query: 635 atg 637
|||
Sbjct: 26628 atg 26626
Score = 48.1 bits (24), Expect = 0.006
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 338 cgagcttctcgaagatgtcgttgatgaa 365
||||||||||| ||||||||||||||||
Sbjct: 991858 cgagcttctcggagatgtcgttgatgaa 991885
>ref|NM_184374.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 462
Score = 391 bits (197), Expect = e-106
Identities = 263/285 (92%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 452 gtgaatttagtgacggccttggtgccctcagagacggcgtgcttggcgagctcgccgggg 393
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 392 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 333
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| | ||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 332 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 273
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 272 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 213
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 212 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 168
Score = 117 bits (59), Expect = 8e-024
Identities = 103/119 (86%), Gaps = 9/119 (7%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 119 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctccgct 60
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccat 632
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 59 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 1
>ref|NM_184399.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 462
Score = 391 bits (197), Expect = e-106
Identities = 263/285 (92%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| || || |||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 452 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 393
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 392 aggacgaggcggacggaggtctggatctcccgtgaggtgatggtgggcttcttgttgtag 333
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
||||| |||||||| | ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 332 cgcgcgagcttggcggactccccggcgagcttctcgaagatgtcgttgatgaaggagttc 273
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 272 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 213
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 212 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 168
Score = 117 bits (59), Expect = 8e-024
Identities = 103/119 (86%), Gaps = 9/119 (7%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| ||||||||||||||||||||| |||||||| ||| |
Sbjct: 119 gggagacgcttctccgccttgggcttcttccccgccagggccttctcggccttctccgcc 60
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccat 632
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 59 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccat 1
>gb|CH401206.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000043 genomic
scaffold, whole genome shotgun sequence
Length = 11965857
Score = 391 bits (197), Expect = e-106
Identities = 263/285 (92%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 10827228 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 10827169
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 10827168 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 10827109
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 10827108 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 10827049
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 10827048 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 10826989
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 10826988 aagatgtagatcttgtaggtctccacgctcttcttccccttcttc 10826944
Score = 276 bits (139), Expect = 2e-071
Identities = 259/299 (86%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 4861003 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 4860944
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| || ||||||||||| || ||||| || |||||||| |||||||||||||||||
Sbjct: 4860943 aggacgagacgaacagaggtctggatctcgcgggaggtgattgtgggcttcttgttgtac 4860884
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
| |||||| | || ||||| ||||||||||||| |||||||||| |||||| |||
Sbjct: 4860883 ctggcaagcctcgcggcctcctgctcgagcttctcgaaaatgtcgttgacgaaggaattc 4860824
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||| || ||||| || || |||||||| |||||||||
Sbjct: 4860823 atgatggacatggccttggaggagattcctatgtctggatgcacctgcttgagcaccttg 4860764
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttcttacccttcttgtc 491
||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 4860763 aagatgtagattttataggtctccacgcttttcttcgccttcttcttccccttcttgtc 4860705
Score = 145 bits (73), Expect = 4e-032
Identities = 111/123 (90%), Gaps = 3/123 (2%)
Strand = Plus / Minus
Query: 518 ccgccgggaggcgcttctcggccttgggcttcttccccgccg---gggccttcgcggcag 574
|||| ||||| |||||||| |||||||||||||||||||||| |||||||| | || |
Sbjct: 10826897 ccgcggggagccgcttctccgccttgggcttcttccccgccgccggggccttctccgccg 10826838
Query: 575 cgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatcg 634
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 10826837 cgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatgg 10826778
Query: 635 atg 637
|||
Sbjct: 10826777 atg 10826775
Score = 63.9 bits (32), Expect = 1e-007
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 582 ctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
|||||| |||||||||||| | |||||||||||||||||||| ||| |||||
Sbjct: 4860632 ctcctctgctggcttcttctctgccggcttcttctccgccttcggcaccatc 4860581
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 426 caccttgaagatgtagatcttgtaggtct 454
||||||||||||||||||||||| |||||
Sbjct: 7877597 caccttgaagatgtagatcttgttggtct 7877625
Score = 48.1 bits (24), Expect = 0.006
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 338 cgagcttctcgaagatgtcgttgatgaa 365
||||||||||| ||||||||||||||||
Sbjct: 11772113 cgagcttctcggagatgtcgttgatgaa 11772140
Score = 48.1 bits (24), Expect = 0.006
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 338 cgagcttctcgaagatgtcgttgatgaa 365
|||||||||||||||||||||| |||||
Sbjct: 849359 cgagcttctcgaagatgtcgttaatgaa 849332
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 391 bits (197), Expect = e-106
Identities = 263/285 (92%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 28127541 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 28127482
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 28127481 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 28127422
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 28127421 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 28127362
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 28127361 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 28127302
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 28127301 aagatgtagatcttgtaggtctccacgctcttcttccccttcttc 28127257
Score = 276 bits (139), Expect = 2e-071
Identities = 259/299 (86%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 22161316 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 22161257
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| || ||||||||||| || ||||| || |||||||| |||||||||||||||||
Sbjct: 22161256 aggacgagacgaacagaggtctggatctcgcgggaggtgattgtgggcttcttgttgtac 22161197
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
| |||||| | || ||||| ||||||||||||| |||||||||| |||||| |||
Sbjct: 22161196 ctggcaagcctcgcggcctcctgctcgagcttctcgaaaatgtcgttgacgaaggaattc 22161137
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||| || ||||| || || |||||||| |||||||||
Sbjct: 22161136 atgatggacatggccttggaggagattcctatgtctggatgcacctgcttgagcaccttg 22161077
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttcttacccttcttgtc 491
||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 22161076 aagatgtagattttataggtctccacgcttttcttcgccttcttcttccccttcttgtc 22161018
Score = 145 bits (73), Expect = 4e-032
Identities = 111/123 (90%), Gaps = 3/123 (2%)
Strand = Plus / Minus
Query: 518 ccgccgggaggcgcttctcggccttgggcttcttccccgccg---gggccttcgcggcag 574
|||| ||||| |||||||| |||||||||||||||||||||| |||||||| | || |
Sbjct: 28127210 ccgcggggagccgcttctccgccttgggcttcttccccgccgccggggccttctccgccg 28127151
Query: 575 cgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatcg 634
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 28127150 cgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatgg 28127091
Query: 635 atg 637
|||
Sbjct: 28127090 atg 28127088
Score = 67.9 bits (34), Expect = 7e-009
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 343 ttctcgaagatgtcgttgatgaaggagttcatgatgga 380
|||||||||||||| |||||||||||||||||||||||
Sbjct: 8223364 ttctcgaagatgtcattgatgaaggagttcatgatgga 8223401
Score = 67.9 bits (34), Expect = 7e-009
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 416 cctgcttcagcaccttgaagatgtagatcttgtaggtctcca 457
|||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 6814313 cctgcttctgcaccttgaagatgtagatattgtaggtctcca 6814354
Score = 63.9 bits (32), Expect = 1e-007
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 582 ctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
|||||| |||||||||||| | |||||||||||||||||||| ||| |||||
Sbjct: 22160945 ctcctctgctggcttcttctctgccggcttcttctccgccttcggcaccatc 22160894
Score = 54.0 bits (27), Expect = 1e-004
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 339 gagcttctcgaagatgtcgttgatgaa 365
|||||||||||||||||||||||||||
Sbjct: 3719855 gagcttctcgaagatgtcgttgatgaa 3719881
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 426 caccttgaagatgtagatcttgtaggtct 454
||||||||||||||||||||||| |||||
Sbjct: 25177910 caccttgaagatgtagatcttgttggtct 25177938
Score = 48.1 bits (24), Expect = 0.006
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 338 cgagcttctcgaagatgtcgttgatgaa 365
||||||||||| ||||||||||||||||
Sbjct: 29072426 cgagcttctcggagatgtcgttgatgaa 29072453
Score = 48.1 bits (24), Expect = 0.006
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 338 cgagcttctcgaagatgtcgttgatgaa 365
|||||||||||||||||||||| |||||
Sbjct: 18149672 cgagcttctcgaagatgtcgttaatgaa 18149645
Score = 48.1 bits (24), Expect = 0.006
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 427 accttgaagatgtagatcttgtaggtctccac 458
|||||||| ||||| |||||||||||||||||
Sbjct: 8223447 accttgaatatgtaaatcttgtaggtctccac 8223478
Score = 44.1 bits (22), Expect = 0.099
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 340 agcttctcgaagatgtcgttgatgaa 365
||||||||||||||||| ||||||||
Sbjct: 6128351 agcttctcgaagatgtctttgatgaa 6128326
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 391 bits (197), Expect = e-106
Identities = 263/285 (92%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 28392155 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 28392096
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 28392095 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 28392036
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 28392035 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 28391976
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 28391975 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 28391916
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 28391915 aagatgtagatcttgtaggtctccacgctcttcttccccttcttc 28391871
Score = 276 bits (139), Expect = 2e-071
Identities = 259/299 (86%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 22480461 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 22480402
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| || ||||||||||| || ||||| || |||||||| |||||||||||||||||
Sbjct: 22480401 aggacgagacgaacagaggtctggatctcgcgggaggtgattgtgggcttcttgttgtac 22480342
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
| |||||| | || ||||| ||||||||||||| |||||||||| |||||| |||
Sbjct: 22480341 ctggcaagcctcgcggcctcctgctcgagcttctcgaaaatgtcgttgacgaaggaattc 22480282
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||| || ||||| || || |||||||| |||||||||
Sbjct: 22480281 atgatggacatggccttggaggagattcctatgtctggatgcacctgcttgagcaccttg 22480222
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttcttacccttcttgtc 491
||||||||||| || ||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 22480221 aagatgtagattttataggtctccacgcttttcttcgccttcttcttccccttcttgtc 22480163
Score = 145 bits (73), Expect = 4e-032
Identities = 111/123 (90%), Gaps = 3/123 (2%)
Strand = Plus / Minus
Query: 518 ccgccgggaggcgcttctcggccttgggcttcttccccgccg---gggccttcgcggcag 574
|||| ||||| |||||||| |||||||||||||||||||||| |||||||| | || |
Sbjct: 28391824 ccgcggggagccgcttctccgccttgggcttcttccccgccgccggggccttctccgccg 28391765
Query: 575 cgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatcg 634
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 28391764 cgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatgg 28391705
Query: 635 atg 637
|||
Sbjct: 28391704 atg 28391702
Score = 67.9 bits (34), Expect = 7e-009
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 416 cctgcttcagcaccttgaagatgtagatcttgtaggtctcca 457
|||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 6896155 cctgcttctgcaccttgaagatgtagatattgtaggtctcca 6896196
Score = 63.9 bits (32), Expect = 1e-007
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 582 ctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
|||||| |||||||||||| | |||||||||||||||||||| ||| |||||
Sbjct: 22480090 ctcctctgctggcttcttctctgccggcttcttctccgccttcggcaccatc 22480039
Score = 54.0 bits (27), Expect = 1e-004
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 339 gagcttctcgaagatgtcgttgatgaa 365
|||||||||||||||||||||||||||
Sbjct: 3720743 gagcttctcgaagatgtcgttgatgaa 3720769
Score = 50.1 bits (25), Expect = 0.002
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 426 caccttgaagatgtagatcttgtaggtct 454
||||||||||||||||||||||| |||||
Sbjct: 25447111 caccttgaagatgtagatcttgttggtct 25447139
Score = 48.1 bits (24), Expect = 0.006
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 338 cgagcttctcgaagatgtcgttgatgaa 365
||||||||||| ||||||||||||||||
Sbjct: 29356934 cgagcttctcggagatgtcgttgatgaa 29356961
Score = 48.1 bits (24), Expect = 0.006
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 338 cgagcttctcgaagatgtcgttgatgaa 365
|||||||||||||||||||||| |||||
Sbjct: 18422090 cgagcttctcgaagatgtcgttaatgaa 18422063
Score = 44.1 bits (22), Expect = 0.099
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 340 agcttctcgaagatgtcgttgatgaa 365
||||||||||||||||| ||||||||
Sbjct: 6238958 agcttctcgaagatgtctttgatgaa 6238933
>gb|AU032007.1|AU032007 AU032007 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3125_8Z, mRNA sequence
Length = 581
Score = 387 bits (195), Expect = e-105
Identities = 262/285 (91%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 363 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 304
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 303 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 244
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 243 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 184
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 183 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 124
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 123 aagatgtagatcttgtaggtctccangntcttcttccccttcttc 79
>gb|AU097681.1|AU097681 AU097681 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0745, mRNA sequence
Length = 707
Score = 387 bits (195), Expect = e-105
Identities = 272/298 (91%)
Strand = Plus / Minus
Query: 180 aatctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggc 239
|||||||| || |||||||| || || |||||||||||||| ||||| |||||||||||
Sbjct: 540 aatctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 481
Query: 240 gagctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtggg 299
|||||||||||| ||||| ||||| || ||||| || |||||||| ||||||||||||||
Sbjct: 480 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 421
Query: 300 cttcttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgtt 359
|||||||||||||||||| |||||||| | ||| ||||||||||| ||||||||||||||
Sbjct: 420 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttntcgaagatgtcgtt 361
Query: 360 gatgaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctg 419
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 360 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 301
Query: 420 cttcagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||| |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 300 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 243
Score = 67.9 bits (34), Expect = 7e-009
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcggc 572
||||| |||||||| ||||||||||||||||||||| |||||||| ||||
Sbjct: 194 gggagacgcttctccgccttgggcttcttccccgccagggccttctcggc 145
>gb|CB662156.1|CB662156 OSJNEd05O18.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05O18 5', mRNA sequence
Length = 702
Score = 387 bits (195), Expect = e-105
Identities = 270/295 (91%)
Strand = Plus / Minus
Query: 183 ctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgag 242
|||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 510 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 451
Query: 243 ctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggctt 302
||||||||| ||||| ||||| || | ||| || |||||||| |||||||||||||||||
Sbjct: 450 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 391
Query: 303 cttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgat 362
|||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 390 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 331
Query: 363 gaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgctt 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 330 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 271
Query: 423 cagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||||||||| || ||||||| ||||||||
Sbjct: 270 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 216
Score = 129 bits (65), Expect = 2e-027
Identities = 109/125 (87%), Gaps = 9/125 (7%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 167 gggagacgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 108
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 107 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 48
Query: 634 gatgc 638
|||||
Sbjct: 47 gatgc 43
>gb|CB662157.1|CB662157 OSJNEd05O18.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd05O18 3', mRNA sequence
Length = 827
Score = 387 bits (195), Expect = e-105
Identities = 270/295 (91%)
Strand = Plus / Plus
Query: 183 ctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgag 242
|||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 245 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 304
Query: 243 ctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggctt 302
||||||||| ||||| ||||| || | ||| || |||||||| |||||||||||||||||
Sbjct: 305 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 364
Query: 303 cttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgat 362
|||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 365 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 424
Query: 363 gaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgctt 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 425 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 484
Query: 423 cagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||||||||| || ||||||| ||||||||
Sbjct: 485 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 539
Score = 129 bits (65), Expect = 2e-027
Identities = 109/125 (87%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 588 gggagacgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 647
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 648 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 707
Query: 634 gatgc 638
|||||
Sbjct: 708 gatgc 712
>gb|CF278594.1|CF278594 14ETL--04-I24.b1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--04-I24, mRNA sequence
Length = 567
Score = 387 bits (195), Expect = e-105
Identities = 270/295 (91%)
Strand = Plus / Minus
Query: 183 ctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgag 242
|||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 535 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 476
Query: 243 ctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggctt 302
||||||||| ||||| ||||| || | ||| || |||||||| |||||||||||||||||
Sbjct: 475 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 416
Query: 303 cttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgat 362
|||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 415 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 356
Query: 363 gaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgctt 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 355 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 296
Query: 423 cagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||||||||| || ||||||| ||||||||
Sbjct: 295 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 241
Score = 129 bits (65), Expect = 2e-027
Identities = 109/125 (87%), Gaps = 9/125 (7%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 192 gggagacgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 133
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 132 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 73
Query: 634 gatgc 638
|||||
Sbjct: 72 gatgc 68
>gb|CF291302.1|CF291302 14ROOT--01-K20.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-K20, mRNA sequence
Length = 552
Score = 387 bits (195), Expect = e-105
Identities = 272/298 (91%)
Strand = Plus / Minus
Query: 180 aatctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggc 239
|||||||| || |||||||| || || |||||||||||||| ||||| |||||||||||
Sbjct: 544 aatctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 485
Query: 240 gagctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtggg 299
|||||||||||| ||||| ||||| || ||||| || |||||||| ||||||||||||||
Sbjct: 484 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 425
Query: 300 cttcttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgtt 359
|||||||||||||||||| |||||||| | ||| ||||||||||||| ||||||||||||
Sbjct: 424 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctngaagatgtcgtt 365
Query: 360 gatgaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctg 419
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 364 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 305
Query: 420 cttcagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||| |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 304 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 247
Score = 129 bits (65), Expect = 2e-027
Identities = 109/125 (87%), Gaps = 9/125 (7%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 198 gggagacgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 139
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 138 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatg 79
Query: 634 gatgc 638
|||||
Sbjct: 78 gatgc 74
>gb|CF292227.1|CF292227 14ROOT--02-P16.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-P16, mRNA sequence
Length = 623
Score = 387 bits (195), Expect = e-105
Identities = 270/295 (91%)
Strand = Plus / Minus
Query: 183 ctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgag 242
|||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 544 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 485
Query: 243 ctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggctt 302
||||||||| ||||| ||||| || | ||| || |||||||| |||||||||||||||||
Sbjct: 484 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 425
Query: 303 cttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgat 362
|||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 424 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 365
Query: 363 gaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgctt 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 364 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 305
Query: 423 cagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||||||||| || ||||||| ||||||||
Sbjct: 304 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 250
Score = 129 bits (65), Expect = 2e-027
Identities = 109/125 (87%), Gaps = 9/125 (7%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 201 gggagacgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 142
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 141 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 82
Query: 634 gatgc 638
|||||
Sbjct: 81 gatgc 77
>gb|CF297134.1|CF297134 30DGS--07-M18.b1 Rice leaf plasmid cDNA library I (30DGS) Oryza
sativa (japonica cultivar-group) cDNA clone
30DGS--07-M18, mRNA sequence
Length = 559
Score = 387 bits (195), Expect = e-105
Identities = 272/298 (91%)
Strand = Plus / Minus
Query: 180 aatctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggc 239
|||||||| || |||||||| || || |||||||||||||| ||||| |||||||||||
Sbjct: 543 aatctaagcggaggtgaacttggtcacagccttggtgccctcggagacggcgtgcttggc 484
Query: 240 gagctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtggg 299
|||||||||||| ||||| ||||| || ||||| || |||||||| ||||||||||||||
Sbjct: 483 gagctcgccggggaggacgaggcggacggaggtctggatctcccgtgaggtgatggtggg 424
Query: 300 cttcttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgtt 359
|||||||||||||||||| |||||||| | ||| ||||||||||||| ||||||||||||
Sbjct: 423 cttcttgttgtagcgcgcgagcttggcggactccccggcgagcttctngaagatgtcgtt 364
Query: 360 gatgaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctg 419
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 363 gatgaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctg 304
Query: 420 cttcagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||| |||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 303 cttgagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 246
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| ||||||||||||||||||||| |||||||| ||| |
Sbjct: 197 gggagacgcttctccgccttgggcttcttccccgccagggccttctcggccttctccgcc 138
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 137 gcgggctcctcctccgcgggcttcttcgccgccggcttcttctccgccttgggcgccatg 78
Query: 634 gatgc 638
|||||
Sbjct: 77 gatgc 73
>gb|CF333473.1|CF333473 JMT--02-G04.b1 AtJMT-overexpressing transgenic rice plasmid cDNA
library (JMT) Oryza sativa (japonica cultivar-group)
cDNA clone JMT--02-G04, mRNA sequence
Length = 610
Score = 387 bits (195), Expect = e-105
Identities = 270/295 (91%)
Strand = Plus / Minus
Query: 183 ctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgag 242
|||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 554 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 495
Query: 243 ctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggctt 302
||||||||| ||||| ||||| || | ||| || |||||||| |||||||||||||||||
Sbjct: 494 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 435
Query: 303 cttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgat 362
|||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 434 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 375
Query: 363 gaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgctt 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 374 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 315
Query: 423 cagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||||||||| || ||||||| ||||||||
Sbjct: 314 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 260
Score = 129 bits (65), Expect = 2e-027
Identities = 109/125 (87%), Gaps = 9/125 (7%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 211 gggagacgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 152
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 151 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 92
Query: 634 gatgc 638
|||||
Sbjct: 91 gatgc 87
>gb|CV731987.1|CV731987 FLO--06-E06.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--06-E06,
mRNA sequence
Length = 493
Score = 387 bits (195), Expect = e-105
Identities = 270/295 (91%)
Strand = Plus / Plus
Query: 183 ctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgag 242
|||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 198 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 257
Query: 243 ctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggctt 302
||||||||| ||||| ||||| || | ||| || |||||||| |||||||||||||||||
Sbjct: 258 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 317
Query: 303 cttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgat 362
|||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 318 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 377
Query: 363 gaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgctt 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 378 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 437
Query: 423 cagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||||||||| || ||||||| ||||||||
Sbjct: 438 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 492
>gb|AACV01000215.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000215, whole
genome shotgun sequence
Length = 50442
Score = 387 bits (195), Expect = e-105
Identities = 270/295 (91%)
Strand = Plus / Plus
Query: 183 ctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgag 242
|||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 12722 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 12781
Query: 243 ctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggctt 302
||||||||| ||||| ||||| || | ||| || |||||||| |||||||||||||||||
Sbjct: 12782 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 12841
Query: 303 cttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgat 362
|||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 12842 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 12901
Query: 363 gaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgctt 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 12902 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 12961
Query: 423 cagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||||||||| || ||||||| ||||||||
Sbjct: 12962 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 13016
Score = 375 bits (189), Expect = e-101
Identities = 261/285 (91%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| || || |||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 27769 gtgaacttggtcacagccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 27710
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 27709 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 27650
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 27649 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 27590
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 27589 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 27530
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 27529 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 27485
Score = 129 bits (65), Expect = 2e-027
Identities = 109/125 (87%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 13065 gggagacgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 13124
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 13125 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 13184
Query: 634 gatgc 638
|||||
Sbjct: 13185 gatgc 13189
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| ||||||||||||||||| |||||||||||| ||| |
Sbjct: 27430 gggagccgcttctccgccttgggcttcttcccggccggggccttctcggccttctccgcc 27371
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 27370 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 27311
Query: 634 gatgc 638
|||||
Sbjct: 27310 gatgc 27306
Score = 121 bits (61), Expect = 5e-025
Identities = 108/125 (86%), Gaps = 9/125 (7%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 123 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctctgcc 182
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 183 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 242
Query: 634 gatgc 638
|||||
Sbjct: 243 gatgc 247
Score = 73.8 bits (37), Expect = 1e-010
Identities = 50/53 (94%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 403 atgtcggggtggacctgcttcagcaccttgaagatgtagatcttgtaggtctc 455
||||||||||| || ||||| ||||||||||||||||||||||||||||||||
Sbjct: 1 atgtcggggtgaac-tgcttgagcaccttgaagatgtagatcttgtaggtctc 52
>ref|NM_184407.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 462
Score = 387 bits (195), Expect = e-105
Identities = 270/295 (91%)
Strand = Plus / Minus
Query: 183 ctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgag 242
|||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 462 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 403
Query: 243 ctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggctt 302
||||||||| ||||| ||||| || | ||| || |||||||| |||||||||||||||||
Sbjct: 402 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 343
Query: 303 cttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgat 362
|||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 342 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 283
Query: 363 gaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgctt 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 282 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 223
Query: 423 cagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||||||||| || ||||||| ||||||||
Sbjct: 222 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 168
Score = 125 bits (63), Expect = 3e-026
Identities = 104/119 (87%), Gaps = 9/119 (7%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 119 gggagacgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 60
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccat 632
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 59 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccat 1
>gb|AU097675.1|AU097675 AU097675 Rice immature leaf including apical meristem (under long
day condition) Oryza sativa (japonica cultivar-group)
cDNA clone E50407, mRNA sequence
Length = 474
Score = 385 bits (194), Expect = e-104
Identities = 253/273 (92%)
Strand = Plus / Minus
Query: 183 ctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgag 242
|||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 275 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 216
Query: 243 ctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggctt 302
||||||||| ||||| ||||| || | ||| || ||| |||| |||||||||||||||||
Sbjct: 215 ctcgccggggaggacgaggcggacggcggtctggatcncccgggaggtgatggtgggctt 156
Query: 303 cttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgat 362
|||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 155 cttgttgtagcgggcgagcttggcagcctcggcggcgagcttctcgaagatgtcgttgat 96
Query: 363 gaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgctt 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 95 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 36
Query: 423 cagcaccttgaagatgtagatcttgtaggtctc 455
||||||||||||||||||||||||||||||||
Sbjct: 35 gagcaccttgaagatgtagatcttgtaggtctc 3
>gb|CA998897.1|CA998897 S345N_D05 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 460
Score = 385 bits (194), Expect = e-104
Identities = 248/266 (93%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 274 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 215
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 214 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 155
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 154 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 95
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 94 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 35
Query: 433 aagatgtagatcttgtaggtctccac 458
||||||||||||||||||||||||||
Sbjct: 34 aagatgtagatcttgtaggtctccac 9
>gb|CF307934.1|CF307934 ABF--01-I21.b1 ABF3-overexpressing transgenic rice plasmid cDNA
library (ABF) Oryza sativa (japonica cultivar-group)
cDNA clone ABF--01-I21, mRNA sequence
Length = 504
Score = 385 bits (194), Expect = e-104
Identities = 248/266 (93%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 315 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcgagctcgccgggg 256
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || ||||| || |||||||||||||||||||||||||||
Sbjct: 255 aggacgaggcggacggaggtctggatctcgcgggaggtgatggtgggcttcttgttgtag 196
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 195 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 136
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 135 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagaaccttg 76
Query: 433 aagatgtagatcttgtaggtctccac 458
||||||||||||||||||||||||||
Sbjct: 75 aagatgtagatcttgtaggtctccac 50
>gb|CB670863.1|CB670863 OSJNEe04C16.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe04C16 3', mRNA sequence
Length = 729
Score = 383 bits (193), Expect = e-104
Identities = 262/285 (91%)
Strand = Plus / Plus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 189 gtgaatttagtgacggccttggtgccctcaaagacggcgtgcttggcgagctcgccgggg 248
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 249 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 308
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| | ||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 309 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 368
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 369 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 428
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 429 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 473
Score = 119 bits (60), Expect = 2e-024
Identities = 113/132 (85%), Gaps = 9/132 (6%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||| ||||||||| ||| |
Sbjct: 522 gggagacgcttctccgccttgggcttcttccccgcgggggccttctcggccttctccgct 581
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 582 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 641
Query: 634 gatgcggctgct 645
| ||| ||||||
Sbjct: 642 gctgccgctgct 653
>gb|CF292148.1|CF292148 14ROOT--02-N19.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-N19, mRNA sequence
Length = 549
Score = 383 bits (193), Expect = e-104
Identities = 262/285 (91%)
Strand = Plus / Minus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
|||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||||||
Sbjct: 543 gtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaagctcgccgggg 484
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || | ||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 483 aggacgaggcggacggcggtctggatctcccgggaggtgatggtgggcttcttgttgtag 424
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 423 cgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgatgaaggagttc 364
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 363 atgatggacatggccttggaggagatgccgatgtcggggtggacctgcttgagcaccttg 304
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||| ||||||||
Sbjct: 303 aagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 259
Score = 129 bits (65), Expect = 2e-027
Identities = 109/125 (87%), Gaps = 9/125 (7%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 210 gggagacgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 151
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 150 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 91
Query: 634 gatgc 638
|||||
Sbjct: 90 gatgc 86
>gb|CV728225.1|CV728225 14Salt--06-N03.g1 Salt treated rice leaf lambda phage cDNA library
(14Salt) Oryza sativa (japonica cultivar-group) cDNA
clone 14Salt--06-N03, mRNA sequence
Length = 490
Score = 383 bits (193), Expect = e-104
Identities = 262/285 (91%)
Strand = Plus / Plus
Query: 193 gtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgagctcgccggga 252
||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 124 gtgaatttagtgacggccttggtgccctcatagacggcgtgcttggcgagctcgccgggg 183
Query: 253 aggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggcttcttgttgtag 312
||||| ||||| || ||||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 184 aggacgaggcggacggaggtctggatctcccgggaggtgatggtgggcttcttgttgtag 243
Query: 313 cgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgatgaaggagttc 372
|| || |||||||| | ||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 244 cgggcgagcttggcggactctccggcgagcttctcgaagatgtcattgatgaaggagttc 303
Query: 373 atgatggacatggccttggaagagatgccgatgtcggggtggacctgcttcagcaccttg 432
|||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||
Sbjct: 304 atgatggacatggccttggaggagatgccgatgtcggggtgaacctgcttgagcaccttg 363
Query: 433 aagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 364 aagatgtagatcttgtaggtctcgacgctcttcttcgccttcttc 408
Score = 52.0 bits (26), Expect = 4e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccg 556
||||| |||||||| |||||||||||||||||||
Sbjct: 457 gggagacgcttctccgccttgggcttcttccccg 490
>gb|CV732516.1|CV732516 FLO--07-A10.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--07-A10,
mRNA sequence
Length = 509
Score = 383 bits (193), Expect = e-104
Identities = 253/273 (92%)
Strand = Plus / Plus
Query: 183 ctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgag 242
|||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 233 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 292
Query: 243 ctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggctt 302
||||||||| ||||| ||||| || | ||| || |||||||| |||||||||||||||||
Sbjct: 293 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 352
Query: 303 cttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgat 362
|||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 353 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 412
Query: 363 gaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgctt 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 413 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 472
Query: 423 cagcaccttgaagatgtagatcttgtaggtctc 455
||||||||||||||||||||||||||||||||
Sbjct: 473 gagcaccttgaagatgtagatcttgtaggtctc 505
>gb|CF290908.1|CF290908 14ROOT--01-B24.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-B24, mRNA sequence
Length = 531
Score = 379 bits (191), Expect = e-102
Identities = 269/295 (91%)
Strand = Plus / Plus
Query: 183 ctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgag 242
|||||| || |||||||| | |||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 214 ctaagaggaagtgaacttggggacggccttggtgccctcggagacggcgtgcttggcaag 273
Query: 243 ctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggctt 302
||||||||| ||||||||||| || | ||| || |||||||| |||||||||||||||||
Sbjct: 274 ctcgccggggaggacaaggcggacggcggtctggatctcccgggaggtgatggtgggctt 333
Query: 303 cttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgat 362
|||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 334 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 393
Query: 363 gaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgctt 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 394 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 453
Query: 423 cagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
||||||||||||||||| |||||||||||||| || ||||||| ||||||||
Sbjct: 454 gagcaccttgaagatgtaaatcttgtaggtctcgacgctcttcttccccttcttc 508
>gb|CF291164.1|CF291164 14ROOT--01-H18.g1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--01-H18, mRNA sequence
Length = 594
Score = 379 bits (191), Expect = e-102
Identities = 269/295 (91%)
Strand = Plus / Plus
Query: 183 ctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgag 242
|||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 200 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 259
Query: 243 ctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggctt 302
||||||||| ||||| ||||| || | ||| || |||||||| |||||||||||||||||
Sbjct: 260 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 319
Query: 303 cttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgat 362
|||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 320 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 379
Query: 363 gaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgctt 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 380 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 439
Query: 423 cagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||| ||||| || ||||||| ||||||||
Sbjct: 440 gagcaccttgaagatgtagatcttgtaagtctcgacgctcttcttccccttcttc 494
Score = 75.8 bits (38), Expect = 3e-011
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcggc 572
||||| |||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 543 gggagacgcttctccgccttgggcttcttccccgccggggccttctcggc 592
>gb|CF292040.1|CF292040 14ROOT--02-L10.b1 Rice root plasmid cDNA library (14ROOT) Oryza
sativa (japonica cultivar-group) cDNA clone
14ROOT--02-L10, mRNA sequence
Length = 624
Score = 379 bits (191), Expect = e-102
Identities = 269/295 (91%)
Strand = Plus / Minus
Query: 183 ctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgag 242
|||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 536 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 477
Query: 243 ctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggctt 302
||||||||| ||||| ||||| || | ||| || | |||||| |||||||||||||||||
Sbjct: 476 ctcgccggggaggacgaggcggacggcggtctggacctcccgggaggtgatggtgggctt 417
Query: 303 cttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgat 362
|||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 416 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 357
Query: 363 gaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgctt 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 356 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 297
Query: 423 cagcaccttgaagatgtagatcttgtaggtctccaccgacttcttcgccttcttc 477
|||||||||||||||||||||||||||||||| || ||||||| ||||||||
Sbjct: 296 gagcaccttgaagatgtagatcttgtaggtctcgacgctcttcttccccttcttc 242
Score = 129 bits (65), Expect = 2e-027
Identities = 109/125 (87%), Gaps = 9/125 (7%)
Strand = Plus / Minus
Query: 523 gggaggcgcttctcggccttgggcttcttccccgccggggccttcgcgg---------ca 573
||||| |||||||| |||||||||||||||||||||||||||||| ||| |
Sbjct: 193 gggagacgcttctccgccttgggcttcttccccgccggggccttctcggccttctccgcc 134
Query: 574 gcgggctcctcctccgctggcttcttcgcagccggcttcttctccgccttgggcgccatc 633
||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 133 gcgggctcctcctccgcgggcttcttcgcggccggcttcttctccgccttgggcgccatg 74
Query: 634 gatgc 638
|||||
Sbjct: 73 gatgc 69
>gb|AU031069.1|AU031069 AU031069 Rice cDNA from immature leaf including apical meristem
Oryza sativa (japonica cultivar-group) cDNA clone
E60725_2Z, mRNA sequence
Length = 441
Score = 377 bits (190), Expect = e-102
Identities = 252/273 (92%)
Strand = Plus / Minus
Query: 183 ctaagatgatgtgaacttagtgacggccttggtgccctcagagacagcgtgcttggcgag 242
|||||| || |||||||| |||||||||||||||||||| ||||| ||||||||||| ||
Sbjct: 322 ctaagaggaagtgaacttggtgacggccttggtgccctcggagacggcgtgcttggcaag 263
Query: 243 ctcgccgggaaggacaaggcgaacagaggtttgaatctcccgagaggtgatggtgggctt 302
||||||||| ||||| ||||| || | ||| || |||||||| |||||||||||||||||
Sbjct: 262 ctcgccggggaggacgaggcggacggcggtctggatctcccgggaggtgatggtgggctt 203
Query: 303 cttgttgtagcgcgcaagcttggcagcctcgccggcgagcttctcgaagatgtcgttgat 362
|||||||||||| || |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 202 cttgttgtagcgggcgagcttggcggcctcggcggcgagcttctcgaagatgtcgttgat 143
Query: 363 gaaggagttcatgatggacatggccttggaagagatgccgatgtcggggtggacctgctt 422
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 142 gaaggagttcatgatggacatggccttggaggagatgccgatgtcggggtggacctgctt 83
Query: 423 cagcaccttgaagatgtagatcttgtaggtctc 455
||||||||| ||||||||||||||||||||||
Sbjct: 82 gagcaccttgnagatgtagatcttgtaggtctc 50
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,184,170
Number of Sequences: 438736
Number of extensions: 1184170
Number of successful extensions: 10272
Number of sequences better than 0.5: 555
Number of HSP's better than 0.5 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5929
Number of HSP's gapped (non-prelim): 4113
length of query: 694
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 673
effective length of database: 2,791,206,460
effective search space: 1878481947580
effective search space used: 1878481947580
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)