BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCN21b10.yg.2.1
(574 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BM778939.1|BM778939 EST589514 KV2 Medicago truncatula cD... 123 2e-026
gb|BG451837.1|BG451837 NF101B02DT1F1013 Drought Medicago tr... 96 4e-018
gb|CG963332.1|CG963332 MBEEP63TRB mth2 Medicago truncatula ... 86 4e-015
gb|CG976296.1|CG976296 MBEEP74TRB mth2 Medicago truncatula ... 86 4e-015
gb|AC144478.20| Medicago truncatula clone mth2-20b20, compl... 86 4e-015
gb|AC127428.38| Medicago truncatula clone mth2-36c19, WORKI... 86 4e-015
emb|CR497910.1| mth2-174G23FM1 BAC end, cultivar Jemalong A... 58 8e-007
emb|CR503078.1| mth2-180J23FM1 BAC end, cultivar Jemalong A... 58 8e-007
gb|AJ499470.1|AJ499470 AJ499470 MTGIM Medicago truncatula c... 50 2e-004
gb|AJ500111.1|AJ500111 AJ500111 MTGIM Medicago truncatula c... 48 8e-004
gb|AJ500539.1|AJ500539 AJ500539 MTGIM Medicago truncatula c... 48 8e-004
gb|AJ846298.1|AJ846298 AJ846298 MtSCF Medicago truncatula c... 48 8e-004
gb|AJ846446.1|AJ846446 AJ846446 MtSCF Medicago truncatula c... 48 8e-004
gb|AJ547991.1|AJ547991 AJ547991 MTAPHEU Medicago truncatula... 46 0.003
gb|AJ846390.1|AJ846390 AJ846390 MtSCF Medicago truncatula c... 46 0.003
gb|AJ500185.1|AJ500185 AJ500185 MTGIM Medicago truncatula c... 44 0.013
gb|AJ500456.1|AJ500456 AJ500456 MTGIM Medicago truncatula c... 44 0.013
gb|AJ499175.1|AJ499175 AJ499175 MTGIM Medicago truncatula c... 44 0.013
gb|AJ848580.1|AJ848580 AJ848580 MtSN4 Medicago truncatula c... 44 0.013
gb|AJ848660.1|AJ848660 AJ848660 MtSN4 Medicago truncatula c... 44 0.013
gb|AJ500088.1|AJ500088 AJ500088 MTGIM Medicago truncatula c... 42 0.050
gb|AJ500181.1|AJ500181 AJ500181 MTGIM Medicago truncatula c... 42 0.050
gb|AJ500823.1|AJ500823 AJ500823 MTGIM Medicago truncatula c... 42 0.050
gb|AJ499522.1|AJ499522 AJ499522 MTGIM Medicago truncatula c... 42 0.050
gb|AJ499618.1|AJ499618 AJ499618 MTGIM Medicago truncatula c... 42 0.050
gb|AJ499688.1|AJ499688 AJ499688 MTGIM Medicago truncatula c... 42 0.050
gb|AJ548370.1|AJ548370 AJ548370 MTAPHEU Medicago truncatula... 42 0.050
gb|AJ846302.1|AJ846302 AJ846302 MtSCF Medicago truncatula c... 42 0.050
gb|AJ846340.1|AJ846340 AJ846340 MtSCF Medicago truncatula c... 42 0.050
gb|AJ846354.1|AJ846354 AJ846354 MtSCF Medicago truncatula c... 42 0.050
gb|AJ846468.1|AJ846468 AJ846468 MtSCF Medicago truncatula c... 42 0.050
gb|AJ846716.1|AJ846716 AJ846716 MtSN0 Medicago truncatula c... 42 0.050
gb|AJ500217.1|AJ500217 AJ500217 MTGIM Medicago truncatula c... 40 0.20
gb|AJ500301.1|AJ500301 AJ500301 MTGIM Medicago truncatula c... 40 0.20
gb|AJ500566.1|AJ500566 AJ500566 MTGIM Medicago truncatula c... 40 0.20
gb|AJ500595.1|AJ500595 AJ500595 MTGIM Medicago truncatula c... 40 0.20
gb|AJ500711.1|AJ500711 AJ500711 MTGIM Medicago truncatula c... 40 0.20
gb|AJ499808.1|AJ499808 AJ499808 MTGIM Medicago truncatula c... 40 0.20
gb|AJ499960.1|AJ499960 AJ499960 MTGIM Medicago truncatula c... 40 0.20
gb|AJ548142.1|AJ548142 AJ548142 MTAPHEU Medicago truncatula... 40 0.20
gb|AJ845902.1|AJ845902 AJ845902 MtSNF Medicago truncatula c... 40 0.20
gb|AJ846304.1|AJ846304 AJ846304 MtSCF Medicago truncatula c... 40 0.20
gb|AJ846328.1|AJ846328 AJ846328 MtSCF Medicago truncatula c... 40 0.20
gb|AJ846329.1|AJ846329 AJ846329 MtSCF Medicago truncatula c... 40 0.20
gb|AJ846333.1|AJ846333 AJ846333 MtSCF Medicago truncatula c... 40 0.20
gb|AJ846353.1|AJ846353 AJ846353 MtSCF Medicago truncatula c... 40 0.20
gb|AJ846376.1|AJ846376 AJ846376 MtSCF Medicago truncatula c... 40 0.20
gb|AJ846383.1|AJ846383 AJ846383 MtSCF Medicago truncatula c... 40 0.20
gb|AJ846429.1|AJ846429 AJ846429 MtSCF Medicago truncatula c... 40 0.20
gb|AJ846448.1|AJ846448 AJ846448 MtSCF Medicago truncatula c... 40 0.20
gb|AJ846460.1|AJ846460 AJ846460 MtSCF Medicago truncatula c... 40 0.20
gb|AJ846496.1|AJ846496 AJ846496 MtSCF Medicago truncatula c... 40 0.20
gb|AJ846528.1|AJ846528 AJ846528 MtSCF Medicago truncatula c... 40 0.20
gb|AJ846544.1|AJ846544 AJ846544 MtSCF Medicago truncatula c... 40 0.20
gb|AJ846557.1|AJ846557 AJ846557 MtSCF Medicago truncatula c... 40 0.20
gb|AJ846559.1|AJ846559 AJ846559 MtSCF Medicago truncatula c... 40 0.20
gb|AJ846625.1|AJ846625 AJ846625 MtSN0 Medicago truncatula c... 40 0.20
gb|AJ846631.1|AJ846631 AJ846631 MtSN0 Medicago truncatula c... 40 0.20
gb|AJ846671.1|AJ846671 AJ846671 MtSN0 Medicago truncatula c... 40 0.20
gb|AJ846685.1|AJ846685 AJ846685 MtSN0 Medicago truncatula c... 40 0.20
gb|AJ846691.1|AJ846691 AJ846691 MtSN0 Medicago truncatula c... 40 0.20
gb|AJ846699.1|AJ846699 AJ846699 MtSN0 Medicago truncatula c... 40 0.20
gb|AJ846707.1|AJ846707 AJ846707 MtSN0 Medicago truncatula c... 40 0.20
gb|AJ846710.1|AJ846710 AJ846710 MtSN0 Medicago truncatula c... 40 0.20
gb|AJ846729.1|AJ846729 AJ846729 MtSN0 Medicago truncatula c... 40 0.20
gb|AJ846750.1|AJ846750 AJ846750 MtSN0 Medicago truncatula c... 40 0.20
gb|AJ846760.1|AJ846760 AJ846760 MtSN0 Medicago truncatula c... 40 0.20
gb|AJ846778.1|AJ846778 AJ846778 MtSN0 Medicago truncatula c... 40 0.20
gb|AJ846792.1|AJ846792 AJ846792 MtSN0 Medicago truncatula c... 40 0.20
gb|AJ846797.1|AJ846797 AJ846797 MtSN0 Medicago truncatula c... 40 0.20
gb|AJ846812.1|AJ846812 AJ846812 MtSN0 Medicago truncatula c... 40 0.20
gb|AJ846834.1|AJ846834 AJ846834 MtSN0 Medicago truncatula c... 40 0.20
gb|CX525575.1|CX525575 s13dNF24F07AT063_479784 Aphid-Infect... 40 0.20
gb|AJ621860.1|AJ621860 AJ621860 Medicago truncatula J5 root... 40 0.20
gb|AJ864417.1|AJ864417 AJ864417 Medicago truncatula cv. J5 ... 40 0.20
>gb|BM778939.1|BM778939 EST589514 KV2 Medicago truncatula cDNA clone pKV2-20A8, mRNA
sequence
Length = 675
Score = 123 bits (62), Expect = 2e-026
Identities = 170/206 (82%)
Strand = Plus / Plus
Query: 30 cgattctttgttgcactgaattcgaggaaggaggtcaatgtaatgttgaagaaagaagca 89
||||||||||||||| ||||| | || ||||| || |||| | || ||| ||| || ||
Sbjct: 208 cgattctttgttgcattgaatccaagaaaggaagtaaatgcagtgctgaggaaggaggct 267
Query: 90 gaatactttggagacattgtcattttgccatttatagaccgctatgagctggttgttctt 149
| || ||||| || |||||||||||||| ||||| |||||||||||||| ||||| ||
Sbjct: 268 gcttattttggtgatattgtcattttgccctttatggaccgctatgagcttgttgtgatt 327
Query: 150 aagacaattgctatctgtgagtatggggtccagaacttgactgctgcaaacatcatgaaa 209
|| || |||||||||||||||| |||| | || || ||||||||||| | |||||||||
Sbjct: 328 aaaaccattgctatctgtgagtttgggattcaaaatgtgactgctgcacatatcatgaaa 387
Query: 210 tgtgacgatgatacatttgtgagagt 235
||||||||||| || ||||| |||||
Sbjct: 388 tgtgacgatgacacttttgtaagagt 413
>gb|BG451837.1|BG451837 NF101B02DT1F1013 Drought Medicago truncatula cDNA clone NF101B02DT
5', mRNA sequence
Length = 663
Score = 95.6 bits (48), Expect = 4e-018
Identities = 99/116 (85%)
Strand = Plus / Minus
Query: 120 tttatagaccgctatgagctggttgttcttaagacaattgctatctgtgagtatggggtc 179
||||| |||||||||||||| ||||| |||| || |||||||||||||||| |||| |
Sbjct: 661 tttatggaccgctatgagcttgttgtgattaaaaccattgctatctgtgagtttgggatt 602
Query: 180 cagaacttgactgctgcaaacatcatgaaatgtgacgatgatacatttgtgagagt 235
|| || ||||||||||| | |||||||||||||||||||| || ||||| |||||
Sbjct: 601 caaaatgtgactgctgcacatatcatgaaatgtgacgatgacacttttgtaagagt 546
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 468 atggaagatgtaagcatggg 487
||||||||||||||||||||
Sbjct: 313 atggaagatgtaagcatggg 294
>gb|CG963332.1|CG963332 MBEEP63TRB mth2 Medicago truncatula genomic clone 39L6, DNA
sequence
Length = 827
Score = 85.7 bits (43), Expect = 4e-015
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 96 tttggagacattgtcattttgccatttatagaccgctatgagctggttgttcttaagaca 155
||||| || |||||||||||||| ||||| |||||||||||||| ||||| |||| ||
Sbjct: 548 tttggtgatattgtcattttgccctttatggaccgctatgagcttgttgtgattaaaacc 489
Query: 156 attgctatctgtgagtatggggt 178
|||||||||||||||| ||||||
Sbjct: 488 attgctatctgtgagtttggggt 466
Score = 58.0 bits (29), Expect = 8e-007
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 187 tgactgctgcaaacatcatgaaatgtgacgatgatacatttgtgagagt 235
||||||||||| | |||||||||||||||||||| || ||||| |||||
Sbjct: 328 tgactgctgcacatatcatgaaatgtgacgatgacacttttgtaagagt 280
>gb|CG976296.1|CG976296 MBEEP74TRB mth2 Medicago truncatula genomic clone 39N4, DNA
sequence
Length = 888
Score = 85.7 bits (43), Expect = 4e-015
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 96 tttggagacattgtcattttgccatttatagaccgctatgagctggttgttcttaagaca 155
||||| || |||||||||||||| ||||| |||||||||||||| ||||| |||| ||
Sbjct: 642 tttggtgatattgtcattttgccctttatggaccgctatgagcttgttgtgattaaaacc 583
Query: 156 attgctatctgtgagtatggggt 178
|||||||||||||||| ||||||
Sbjct: 582 attgctatctgtgagtttggggt 560
Score = 58.0 bits (29), Expect = 8e-007
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 187 tgactgctgcaaacatcatgaaatgtgacgatgatacatttgtgagagt 235
||||||||||| | |||||||||||||||||||| || ||||| |||||
Sbjct: 422 tgactgctgcacatatcatgaaatgtgacgatgacacttttgtaagagt 374
>gb|AC144478.20| Medicago truncatula clone mth2-20b20, complete sequence
Length = 144248
Score = 85.7 bits (43), Expect = 4e-015
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 96 tttggagacattgtcattttgccatttatagaccgctatgagctggttgttcttaagaca 155
||||| || |||||||||||||| ||||| |||||||||||||| ||||| |||| ||
Sbjct: 7846 tttggtgatattgtcattttgccctttatggaccgctatgagcttgttgtgattaaaacc 7787
Query: 156 attgctatctgtgagtatggggt 178
|||||||||||||||| ||||||
Sbjct: 7786 attgctatctgtgagtttggggt 7764
Score = 58.0 bits (29), Expect = 8e-007
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 187 tgactgctgcaaacatcatgaaatgtgacgatgatacatttgtgagagt 235
||||||||||| | |||||||||||||||||||| || ||||| |||||
Sbjct: 7626 tgactgctgcacatatcatgaaatgtgacgatgacacttttgtaagagt 7578
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 468 atggaagatgtaagcatggg 487
||||||||||||||||||||
Sbjct: 6667 atggaagatgtaagcatggg 6648
>gb|AC127428.38| Medicago truncatula clone mth2-36c19, WORKING DRAFT SEQUENCE, 3 ordered
pieces
Length = 274828
Score = 85.7 bits (43), Expect = 4e-015
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 96 tttggagacattgtcattttgccatttatagaccgctatgagctggttgttcttaagaca 155
||||| || |||||||||||||| ||||| |||||||||||||| ||||| |||| ||
Sbjct: 274190 tttggtgatattgtcattttgccctttatggaccgctatgagcttgttgtgattaaaacc 274249
Query: 156 attgctatctgtgagtatggggt 178
|||||||||||||||| ||||||
Sbjct: 274250 attgctatctgtgagtttggggt 274272
Score = 58.0 bits (29), Expect = 8e-007
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 187 tgactgctgcaaacatcatgaaatgtgacgatgatacatttgtgagagt 235
||||||||||| | |||||||||||||||||||| || ||||| |||||
Sbjct: 274410 tgactgctgcacatatcatgaaatgtgacgatgacacttttgtaagagt 274458
>emb|CR497910.1| mth2-174G23FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 483
Score = 58.0 bits (29), Expect = 8e-007
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 187 tgactgctgcaaacatcatgaaatgtgacgatgatacatttgtgagagt 235
||||||||||| | |||||||||||||||||||| || ||||| |||||
Sbjct: 424 tgactgctgcacatatcatgaaatgtgacgatgacacttttgtaagagt 376
>emb|CR503078.1| mth2-180J23FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 569
Score = 58.0 bits (29), Expect = 8e-007
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 187 tgactgctgcaaacatcatgaaatgtgacgatgatacatttgtgagagt 235
||||||||||| | |||||||||||||||||||| || ||||| |||||
Sbjct: 424 tgactgctgcacatatcatgaaatgtgacgatgacacttttgtaagagt 376
>gb|AJ499470.1|AJ499470 AJ499470 MTGIM Medicago truncatula cDNA clone mtgmacc120004f05,
mRNA sequence
Length = 128
Score = 50.1 bits (25), Expect = 2e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 2 cggccgcccgggcaggtacgcgggg 26
|||||||||||||||||||||||||
Sbjct: 6 cggccgcccgggcaggtacgcgggg 30
>gb|AJ500111.1|AJ500111 AJ500111 MTGIM Medicago truncatula cDNA clone mtgmacc120012g12,
mRNA sequence
Length = 398
Score = 48.1 bits (24), Expect = 8e-004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 2 cggccgcccgggcaggtacgcggg 25
||||||||||||||||||||||||
Sbjct: 397 cggccgcccgggcaggtacgcggg 374
>gb|AJ500539.1|AJ500539 AJ500539 MTGIM Medicago truncatula cDNA clone mtgmacc120017e07,
mRNA sequence
Length = 489
Score = 48.1 bits (24), Expect = 8e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 2 cggccgcccgggcaggtacgcggg 25
||||||||||||||||||||||||
Sbjct: 4 cggccgcccgggcaggtacgcggg 27
>gb|AJ846298.1|AJ846298 AJ846298 MtSCF Medicago truncatula cDNA clone MtCF01B12S6, mRNA
sequence
Length = 775
Score = 48.1 bits (24), Expect = 8e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 gcccgggcaggtacgcgggggctc 30
||||||||||||||||||||||||
Sbjct: 1 gcccgggcaggtacgcgggggctc 24
>gb|AJ846446.1|AJ846446 AJ846446 MtSCF Medicago truncatula cDNA clone MtCF02O17S6, mRNA
sequence
Length = 710
Score = 48.1 bits (24), Expect = 8e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 7 gcccgggcaggtacgcgggggctc 30
||||||||||||||||||||||||
Sbjct: 1 gcccgggcaggtacgcgggggctc 24
>gb|AJ547991.1|AJ547991 AJ547991 MTAPHEU Medicago truncatula cDNA clone mtaehac110005g06,
mRNA sequence
Length = 590
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 6 cgcccgggcaggtacgcgggggc 28
|||||||||||||||||||||||
Sbjct: 590 cgcccgggcaggtacgcgggggc 568
>gb|AJ846390.1|AJ846390 AJ846390 MtSCF Medicago truncatula cDNA clone MtCF02E09S6, mRNA
sequence
Length = 272
Score = 46.1 bits (23), Expect = 0.003
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 7 gcccgggcaggtacgcgggggct 29
|||||||||||||||||||||||
Sbjct: 1 gcccgggcaggtacgcgggggct 23
>gb|AJ500185.1|AJ500185 AJ500185 MTGIM Medicago truncatula cDNA clone mtgmacc120013f07,
mRNA sequence
Length = 557
Score = 44.1 bits (22), Expect = 0.013
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtacgcgggg 26
||||| ||||||||||||||||||||
Sbjct: 5 gcggctgcccgggcaggtacgcgggg 30
>gb|AJ500456.1|AJ500456 AJ500456 MTGIM Medicago truncatula cDNA clone mtgmacc120016f01,
mRNA sequence
Length = 310
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 4 gccgcccgggcaggtacgcggg 25
||||||||||||||||||||||
Sbjct: 310 gccgcccgggcaggtacgcggg 289
>gb|AJ499175.1|AJ499175 AJ499175 MTGIM Medicago truncatula cDNA clone mtgmacc120001a07,
mRNA sequence
Length = 366
Score = 44.1 bits (22), Expect = 0.013
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggtacgcggg 25
||| |||||||||||||||||||||
Sbjct: 361 gcgnccgcccgggcaggtacgcggg 337
>gb|AJ848580.1|AJ848580 AJ848580 MtSN4 Medicago truncatula cDNA clone MtN409E05N2, mRNA
sequence
Length = 93
Score = 44.1 bits (22), Expect = 0.013
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 7 gcccgggcaggtacgcgggggc 28
||||||||||||||||||||||
Sbjct: 93 gcccgggcaggtacgcgggggc 72
>gb|AJ848660.1|AJ848660 AJ848660 MtSN4 Medicago truncatula cDNA clone MtN410G17N2, mRNA
sequence
Length = 122
Score = 44.1 bits (22), Expect = 0.013
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 7 gcccgggcaggtacgcgggggctcga 32
|||||||||||||||||||| |||||
Sbjct: 122 gcccgggcaggtacgcggggtctcga 97
>gb|AJ500088.1|AJ500088 AJ500088 MTGIM Medicago truncatula cDNA clone mtgmacc120012e05,
mRNA sequence
Length = 114
Score = 42.1 bits (21), Expect = 0.050
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtacgcggg 25
|||| ||||||||||||||||||||
Sbjct: 5 gcgggcgcccgggcaggtacgcggg 29
>gb|AJ500181.1|AJ500181 AJ500181 MTGIM Medicago truncatula cDNA clone mtgmacc120013f03,
mRNA sequence
Length = 614
Score = 42.1 bits (21), Expect = 0.050
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggtacg 21
|||||||||||||||||||||
Sbjct: 223 gcggccgcccgggcaggtacg 203
>gb|AJ500823.1|AJ500823 AJ500823 MTGIM Medicago truncatula cDNA clone mtgmacc120020f01,
mRNA sequence
Length = 605
Score = 42.1 bits (21), Expect = 0.050
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 cgcccgggcaggtacgcgggg 26
|||||||||||||||||||||
Sbjct: 1 cgcccgggcaggtacgcgggg 21
>gb|AJ499522.1|AJ499522 AJ499522 MTGIM Medicago truncatula cDNA clone mtgmacc120005c05,
mRNA sequence
Length = 469
Score = 42.1 bits (21), Expect = 0.050
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 cgcccgggcaggtacgcgggg 26
|||||||||||||||||||||
Sbjct: 9 cgcccgggcaggtacgcgggg 29
>gb|AJ499618.1|AJ499618 AJ499618 MTGIM Medicago truncatula cDNA clone mtgmacc120006d04,
mRNA sequence
Length = 173
Score = 42.1 bits (21), Expect = 0.050
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 cgcccgggcaggtacgcgggg 26
|||||||||||||||||||||
Sbjct: 9 cgcccgggcaggtacgcgggg 29
>gb|AJ499688.1|AJ499688 AJ499688 MTGIM Medicago truncatula cDNA clone mtgmacc120007c09,
mRNA sequence
Length = 335
Score = 42.1 bits (21), Expect = 0.050
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 cgcccgggcaggtacgcgggg 26
|||||||||||||||||||||
Sbjct: 9 cgcccgggcaggtacgcgggg 29
>gb|AJ548370.1|AJ548370 AJ548370 MTAPHEU Medicago truncatula cDNA clone mtaehac110006h05,
mRNA sequence
Length = 518
Score = 42.1 bits (21), Expect = 0.050
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 6 cgcccgggcaggtacgcgggg 26
|||||||||||||||||||||
Sbjct: 518 cgcccgggcaggtacgcgggg 498
>gb|AJ846302.1|AJ846302 AJ846302 MtSCF Medicago truncatula cDNA clone MtCF01B18S6, mRNA
sequence
Length = 476
Score = 42.1 bits (21), Expect = 0.050
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 gcccgggcaggtacgcggggg 27
|||||||||||||||||||||
Sbjct: 1 gcccgggcaggtacgcggggg 21
>gb|AJ846340.1|AJ846340 AJ846340 MtSCF Medicago truncatula cDNA clone MtCF01J22S6, mRNA
sequence
Length = 688
Score = 42.1 bits (21), Expect = 0.050
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 gcccgggcaggtacgcggggg 27
|||||||||||||||||||||
Sbjct: 1 gcccgggcaggtacgcggggg 21
>gb|AJ846354.1|AJ846354 AJ846354 MtSCF Medicago truncatula cDNA clone MtCF01N04S6, mRNA
sequence
Length = 418
Score = 42.1 bits (21), Expect = 0.050
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 gcccgggcaggtacgcggggg 27
|||||||||||||||||||||
Sbjct: 1 gcccgggcaggtacgcggggg 21
>gb|AJ846468.1|AJ846468 AJ846468 MtSCF Medicago truncatula cDNA clone MtCF04E10S6, mRNA
sequence
Length = 650
Score = 42.1 bits (21), Expect = 0.050
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 gcccgggcaggtacgcggggg 27
|||||||||||||||||||||
Sbjct: 1 gcccgggcaggtacgcggggg 21
>gb|AJ846716.1|AJ846716 AJ846716 MtSN0 Medicago truncatula cDNA clone MtN004H17S6, mRNA
sequence
Length = 163
Score = 42.1 bits (21), Expect = 0.050
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 7 gcccgggcaggtacgcggggg 27
|||||||||||||||||||||
Sbjct: 1 gcccgggcaggtacgcggggg 21
>gb|AJ500217.1|AJ500217 AJ500217 MTGIM Medicago truncatula cDNA clone mtgmacc120014a04,
mRNA sequence
Length = 458
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 319 gcggccgcccgggcaggtac 300
>gb|AJ500301.1|AJ500301 AJ500301 MTGIM Medicago truncatula cDNA clone mtgmacc120014h08,
mRNA sequence
Length = 164
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 26 gcggccgcccgggcaggtac 45
>gb|AJ500566.1|AJ500566 AJ500566 MTGIM Medicago truncatula cDNA clone mtgmacc120017g10,
mRNA sequence
Length = 406
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 309 gcggccgcccgggcaggtac 290
>gb|AJ500595.1|AJ500595 AJ500595 MTGIM Medicago truncatula cDNA clone mtgmacc120018b05,
mRNA sequence
Length = 381
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 cgcccgggcaggtacgcggg 25
||||||||||||||||||||
Sbjct: 9 cgcccgggcaggtacgcggg 28
>gb|AJ500711.1|AJ500711 AJ500711 MTGIM Medicago truncatula cDNA clone mtgmacc120019d05,
mRNA sequence
Length = 591
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gcggccgcccgggcaggtac 20
||||||||||||||||||||
Sbjct: 320 gcggccgcccgggcaggtac 339
>gb|AJ499808.1|AJ499808 AJ499808 MTGIM Medicago truncatula cDNA clone mtgmacc120008g06,
mRNA sequence
Length = 530
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 ccgggcaggtacgcgggggc 28
||||||||||||||||||||
Sbjct: 12 ccgggcaggtacgcgggggc 31
>gb|AJ499960.1|AJ499960 AJ499960 MTGIM Medicago truncatula cDNA clone mtgmacc120010g05,
mRNA sequence
Length = 238
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 ccgggcaggtacgcgggggc 28
||||||||||||||||||||
Sbjct: 12 ccgggcaggtacgcgggggc 31
>gb|AJ548142.1|AJ548142 AJ548142 MTAPHEU Medicago truncatula cDNA clone mtaehac110001e06,
mRNA sequence
Length = 78
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 cgcccgggcaggtacgcggg 25
||||||||||||||||||||
Sbjct: 22 cgcccgggcaggtacgcggg 41
>gb|AJ845902.1|AJ845902 AJ845902 MtSNF Medicago truncatula cDNA clone MtNF13D16N2, mRNA
sequence
Length = 213
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 7 gcccgggcaggtacgcgggg 26
||||||||||||||||||||
Sbjct: 213 gcccgggcaggtacgcgggg 194
>gb|AJ846304.1|AJ846304 AJ846304 MtSCF Medicago truncatula cDNA clone MtCF01C09S6, mRNA
sequence
Length = 520
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 gcccgggcaggtacgcgggg 26
||||||||||||||||||||
Sbjct: 1 gcccgggcaggtacgcgggg 20
>gb|AJ846328.1|AJ846328 AJ846328 MtSCF Medicago truncatula cDNA clone MtCF01H08S6, mRNA
sequence
Length = 488
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 gcccgggcaggtacgcgggg 26
||||||||||||||||||||
Sbjct: 1 gcccgggcaggtacgcgggg 20
>gb|AJ846329.1|AJ846329 AJ846329 MtSCF Medicago truncatula cDNA clone MtCF01H21S6, mRNA
sequence
Length = 481
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 gcccgggcaggtacgcgggg 26
||||||||||||||||||||
Sbjct: 1 gcccgggcaggtacgcgggg 20
>gb|AJ846333.1|AJ846333 AJ846333 MtSCF Medicago truncatula cDNA clone MtCF01I19S6, mRNA
sequence
Length = 295
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 gcccgggcaggtacgcgggg 26
||||||||||||||||||||
Sbjct: 1 gcccgggcaggtacgcgggg 20
>gb|AJ846353.1|AJ846353 AJ846353 MtSCF Medicago truncatula cDNA clone MtCF01M22S6, mRNA
sequence
Length = 435
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 gcccgggcaggtacgcgggg 26
||||||||||||||||||||
Sbjct: 1 gcccgggcaggtacgcgggg 20
>gb|AJ846376.1|AJ846376 AJ846376 MtSCF Medicago truncatula cDNA clone MtCF02C16S6, mRNA
sequence
Length = 506
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 gcccgggcaggtacgcgggg 26
||||||||||||||||||||
Sbjct: 1 gcccgggcaggtacgcgggg 20
>gb|AJ846383.1|AJ846383 AJ846383 MtSCF Medicago truncatula cDNA clone MtCF02D12S6, mRNA
sequence
Length = 575
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 gcccgggcaggtacgcgggg 26
||||||||||||||||||||
Sbjct: 1 gcccgggcaggtacgcgggg 20
>gb|AJ846429.1|AJ846429 AJ846429 MtSCF Medicago truncatula cDNA clone MtCF02L13S6, mRNA
sequence
Length = 565
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 gcccgggcaggtacgcgggg 26
||||||||||||||||||||
Sbjct: 1 gcccgggcaggtacgcgggg 20
>gb|AJ846448.1|AJ846448 AJ846448 MtSCF Medicago truncatula cDNA clone MtCF02P17S6, mRNA
sequence
Length = 296
Score = 40.1 bits (20), Expect = 0.20
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 gcccgggcaggtacgcgggg 26
||||||||||||||||||||
Sbjct: 1 gcccgggcaggtacgcgggg 20
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 127,178
Number of Sequences: 392609
Number of extensions: 127178
Number of successful extensions: 9956
Number of sequences better than 0.5: 77
Number of HSP's better than 0.5 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9853
Number of HSP's gapped (non-prelim): 102
length of query: 574
length of database: 441,732,993
effective HSP length: 19
effective length of query: 555
effective length of database: 434,273,422
effective search space: 241021749210
effective search space used: 241021749210
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)