BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCH22b04.yg.2.1
(457 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF004745.1|BF004745 EST433243 KV1 Medicago truncatula cD... 129 2e-028
gb|BG457201.1|BG457201 NF100C04PL1F1024 Phosphate starved l... 129 2e-028
gb|CA917270.1|CA917270 EST641417 GPOD Medicago truncatula c... 129 2e-028
gb|AW773865.1|AW773865 EST332851 KV3 Medicago truncatula cD... 123 1e-026
gb|CB892629.1|CB892629 EST645421 HOGA Medicago truncatula c... 115 3e-024
gb|BG646791.1|BG646791 EST508410 HOGA Medicago truncatula c... 100 2e-019
gb|CG974294.1|CG974294 MBECJ03TR mth2 Medicago truncatula g... 96 3e-018
gb|AW573887.1|AW573887 EST316478 GVN Medicago truncatula cD... 96 3e-018
gb|AW776134.1|AW776134 EST335199 DSIL Medicago truncatula c... 96 3e-018
gb|BQ165762.1|BQ165762 EST611631 KVKC Medicago truncatula c... 96 3e-018
gb|AC141866.11| Medicago truncatula clone mth2-12p22, compl... 96 3e-018
gb|CX533662.1|CX533662 s13dNF0KC03MJ018_320475 Methyl Jasmo... 90 2e-016
gb|CX534322.1|CX534322 s13dNF0KC03MJ018_322401 Methyl Jasmo... 90 2e-016
gb|DW016398.1|DW016398 EST1225359 MTY Medicago truncatula c... 86 3e-015
gb|BF639193.1|BF639193 NF094G11PL1F1086 Phosphate starved l... 70 2e-010
gb|CX527781.1|CX527781 s13dNF47C10AT082_516074 Aphid-Infect... 64 1e-008
gb|BQ140170.1|BQ140170 NF029G06PH1F1051 Phoma-infected Medi... 56 3e-006
emb|CR509054.1| mth4-7D16RM1 BAC end, cultivar Jemalong A17... 44 0.010
gb|BG448346.1|BG448346 NF070C12EC1F1087 Elicited cell cultu... 44 0.010
gb|AW776858.1|AW776858 EST335923 DSIL Medicago truncatula c... 42 0.040
gb|BI267612.1|BI267612 NF112G05IN1F1040 Insect herbivory Me... 42 0.040
gb|CX539214.1|CX539214 s13dNF62D12GS094_461688 Germinating ... 42 0.040
gb|AC149801.3| Medicago truncatula chromosome 2 BAC clone m... 42 0.040
>gb|BF004745.1|BF004745 EST433243 KV1 Medicago truncatula cDNA clone pKV1-18D7, mRNA
sequence
Length = 517
Score = 129 bits (65), Expect = 2e-028
Identities = 263/329 (79%)
Strand = Plus / Plus
Query: 40 tctttggcaagtcggaagaagctgcttcgagctcagaccgagcgggagatcctgcagtcc 99
||||| |||||||| |||||| | ||||| |||||||| || ||||| || || |||||
Sbjct: 77 tctttagcaagtcgtaagaagttacttcgtgctcagacggaacgggaaattcttcagtca 136
Query: 100 ctggaccatccatttctaccaaccctgtatactcactttgagacagacaagttttcatgc 159
|| ||||| |||||||| ||||| |||| ||||| |||||||| || || ||||| |||
Sbjct: 137 cttgaccacccatttctcccaactttgtacactcattttgagacggagaaattttcgtgc 196
Query: 160 ttggttatggaattctgccctggaggggatcttcacactcttcgccaaaggcagcctgga 219
||||| |||||||||||||| || || || || || |||||||| || | || || ||
Sbjct: 197 ttggtgatggaattctgcccgggtggagacctccatactcttcggcagaaacaaccaggg 256
Query: 220 aaatatttttcagagcaagcagcaaagttctatgtagctgaggtgctccttgcattggaa 279
|| ||||| | ||||| |||| || || ||||| || ||||| || || ||| ||||
Sbjct: 257 aagcattttcctgagcaggcagtgaaattttatgtggcagaggtcctactggcaatggag 316
Query: 280 tacctgcatatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgttcgg 339
||||| || |||||||||||| |||||||||||||||| ||||| ||||| || ||| ||
Sbjct: 317 tacctacacatgcttgggattgtataccgtgatcttaagccagaaaatgttcttgttagg 376
Query: 340 gaagatggccacatcatgctgtcggactt 368
|| ||||| || || ||||| || |||||
Sbjct: 377 gatgatggacatattatgctctccgactt 405
>gb|BG457201.1|BG457201 NF100C04PL1F1024 Phosphate starved leaf Medicago truncatula cDNA
clone NF100C04PL 5', mRNA sequence
Length = 650
Score = 129 bits (65), Expect = 2e-028
Identities = 263/329 (79%)
Strand = Plus / Plus
Query: 40 tctttggcaagtcggaagaagctgcttcgagctcagaccgagcgggagatcctgcagtcc 99
||||| |||||||| |||||| | ||||| |||||||| || ||||| || || |||||
Sbjct: 35 tctttagcaagtcgtaagaagttacttcgtgctcagacggaacgggaaattcttcagtca 94
Query: 100 ctggaccatccatttctaccaaccctgtatactcactttgagacagacaagttttcatgc 159
|| ||||| |||||||| ||||| |||| ||||| |||||||| || || ||||| |||
Sbjct: 95 cttgaccacccatttctcccaactttgtacactcattttgagacggagaaattttcgtgc 154
Query: 160 ttggttatggaattctgccctggaggggatcttcacactcttcgccaaaggcagcctgga 219
||||| |||||||||||||| || || || || || |||||||| || | || || ||
Sbjct: 155 ttggtgatggaattctgcccgggtggagacctccatactcttcggcagaaacaaccaggg 214
Query: 220 aaatatttttcagagcaagcagcaaagttctatgtagctgaggtgctccttgcattggaa 279
|| ||||| | ||||| |||| || || ||||| || ||||| || || ||| ||||
Sbjct: 215 aagcattttcctgagcaggcagtgaaattttatgtggcagaggtcctactggcaatggag 274
Query: 280 tacctgcatatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgttcgg 339
||||| || |||||||||||| |||||||||||||||| ||||| ||||| || ||| ||
Sbjct: 275 tacctacacatgcttgggattgtataccgtgatcttaagccagaaaatgttcttgttagg 334
Query: 340 gaagatggccacatcatgctgtcggactt 368
|| ||||| || || ||||| || |||||
Sbjct: 335 gatgatggacatattatgctctccgactt 363
>gb|CA917270.1|CA917270 EST641417 GPOD Medicago truncatula cDNA clone GPOD-35L11, mRNA
sequence
Length = 823
Score = 129 bits (65), Expect = 2e-028
Identities = 263/329 (79%)
Strand = Plus / Plus
Query: 40 tctttggcaagtcggaagaagctgcttcgagctcagaccgagcgggagatcctgcagtcc 99
||||| |||||||| |||||| | ||||| |||||||| || ||||| || || |||||
Sbjct: 307 tctttagcaagtcgtaagaagttacttcgtgctcagacggaacgggaaattcttcagtca 366
Query: 100 ctggaccatccatttctaccaaccctgtatactcactttgagacagacaagttttcatgc 159
|| ||||| |||||||| ||||| |||| ||||| |||||||| || || ||||| |||
Sbjct: 367 cttgaccacccatttctcccaactttgtacactcattttgagacggagaaattttcgtgc 426
Query: 160 ttggttatggaattctgccctggaggggatcttcacactcttcgccaaaggcagcctgga 219
||||| |||||||||||||| || || || || || |||||||| || | || || ||
Sbjct: 427 ttggtgatggaattctgcccgggtggagacctccatactcttcggcagaaacaaccaggg 486
Query: 220 aaatatttttcagagcaagcagcaaagttctatgtagctgaggtgctccttgcattggaa 279
|| ||||| | ||||| |||| || || ||||| || ||||| || || ||| ||||
Sbjct: 487 aagcattttcctgagcaggcagtgaaattttatgtggcagaggtcctactggcaatggag 546
Query: 280 tacctgcatatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgttcgg 339
||||| || |||||||||||| |||||||||||||||| ||||| ||||| || ||| ||
Sbjct: 547 tacctacacatgcttgggattgtataccgtgatcttaagccagaaaatgttcttgttagg 606
Query: 340 gaagatggccacatcatgctgtcggactt 368
|| ||||| || || ||||| || |||||
Sbjct: 607 gatgatggacatattatgctctccgactt 635
>gb|AW773865.1|AW773865 EST332851 KV3 Medicago truncatula cDNA clone pKV3-16M2, mRNA
sequence
Length = 649
Score = 123 bits (62), Expect = 1e-026
Identities = 233/290 (80%)
Strand = Plus / Plus
Query: 40 tctttggcaagtcggaagaagctgcttcgagctcagaccgagcgggagatcctgcagtcc 99
||||| |||||||| |||||| | ||||| |||||||| || ||||| || || |||||
Sbjct: 337 tctttagcaagtcgtaagaagttacttcgtgctcagacggaacgggaaattcttcagtca 396
Query: 100 ctggaccatccatttctaccaaccctgtatactcactttgagacagacaagttttcatgc 159
|| ||||| |||||||| ||||| |||| ||||| |||||||| || || ||||| |||
Sbjct: 397 cttgaccacccatttctcccaactttgtacactcattttgagacggagaaattttcgtgc 456
Query: 160 ttggttatggaattctgccctggaggggatcttcacactcttcgccaaaggcagcctgga 219
||||| |||||||||||||| || || || || || |||||||| || | || || ||
Sbjct: 457 ttggtgatggaattctgcccgggtggagacctccatactcttcggcagaaacaaccaggg 516
Query: 220 aaatatttttcagagcaagcagcaaagttctatgtagctgaggtgctccttgcattggaa 279
|| ||||| | ||||| |||| || || ||||| || ||||| || || ||| ||||
Sbjct: 517 aagcattttcctgagcaggcagtgaaattttatgtggcagaggtcctactggcaatggag 576
Query: 280 tacctgcatatgcttgggattatataccgtgatcttaaaccagagaatgt 329
||||| || |||||||||||| |||||||||||||||| ||||| |||||
Sbjct: 577 tacctacacatgcttgggattgtataccgtgatcttaagccagaaaatgt 626
>gb|CB892629.1|CB892629 EST645421 HOGA Medicago truncatula cDNA clone HOGA-19E14, mRNA
sequence
Length = 779
Score = 115 bits (58), Expect = 3e-024
Identities = 232/290 (80%)
Strand = Plus / Plus
Query: 40 tctttggcaagtcggaagaagctgcttcgagctcagaccgagcgggagatcctgcagtcc 99
||||| |||||||| ||| || | ||||| |||||||| || ||||| || || |||||
Sbjct: 482 tctttagcaagtcgtaaggagttacttcgtgctcagacggaacgggaaattcttcagtca 541
Query: 100 ctggaccatccatttctaccaaccctgtatactcactttgagacagacaagttttcatgc 159
|| ||||| |||||||| ||||| |||| ||||| |||||||| || || ||||| |||
Sbjct: 542 cttgaccacccatttctcccaactttgtacactcattttgagacggagaaattttcgtgc 601
Query: 160 ttggttatggaattctgccctggaggggatcttcacactcttcgccaaaggcagcctgga 219
||||| |||||||||||||| || || || || || |||||||| || | || || ||
Sbjct: 602 ttggtgatggaattctgcccgggtggagacctccatactcttcggcagaaacaaccaggg 661
Query: 220 aaatatttttcagagcaagcagcaaagttctatgtagctgaggtgctccttgcattggaa 279
|| ||||| | ||||| |||| || || ||||| || ||||| || || ||| ||||
Sbjct: 662 aagcattttcctgagcaggcagtgaaattttatgtggcagaggtcctactggcaatggag 721
Query: 280 tacctgcatatgcttgggattatataccgtgatcttaaaccagagaatgt 329
||||| || |||||||||||| |||||||||||||||| ||||| |||||
Sbjct: 722 tacctacacatgcttgggattgtataccgtgatcttaagccagaaaatgt 771
>gb|BG646791.1|BG646791 EST508410 HOGA Medicago truncatula cDNA clone pHOGA-9H2 5' end,
mRNA sequence
Length = 729
Score = 99.6 bits (50), Expect = 2e-019
Identities = 230/290 (79%)
Strand = Plus / Plus
Query: 40 tctttggcaagtcggaagaagctgcttcgagctcagaccgagcgggagatcctgcagtcc 99
||||| |||||||| |||||| | ||||| |||||||| || ||||| || || |||||
Sbjct: 435 tctttagcaagtcgtaagaagttacttcgtgctcagacggaacgggaaattcttcagtca 494
Query: 100 ctggaccatccatttctaccaaccctgtatactcactttgagacagacaagttttcatgc 159
|| ||||| |||||||| ||||| |||| ||||| |||||||| || || ||||| |||
Sbjct: 495 cttgaccacccatttctcccaactttgtacactcattttgagacggagaaattttcgtgc 554
Query: 160 ttggttatggaattctgccctggaggggatcttcacactcttcgccaaaggcagcctgga 219
||||| |||||||||||||| || || || || || |||||||| || | || || ||
Sbjct: 555 ttggtgatggaattctgcccgggtggagacctccatactcttcggcagaaacaaccaggg 614
Query: 220 aaatatttttcagagcaagcagcaaagttctatgtagctgaggtgctccttgcattggaa 279
|| ||||| | ||||| |||| || || ||||| || ||||| || || | ||||
Sbjct: 615 aagcattttcctgagcaggcagtgaaattttatgtggcagaggtcctactgggcatggag 674
Query: 280 tacctgcatatgcttgggattatataccgtgatcttaaaccagagaatgt 329
||||| || |||||||||||| |||||||||||||| | ||||| |||||
Sbjct: 675 tacctacacatgcttgggattgtataccgtgatctttagccagaaaatgt 724
>gb|CG974294.1|CG974294 MBECJ03TR mth2 Medicago truncatula genomic clone 26A6, DNA sequence
Length = 913
Score = 95.6 bits (48), Expect = 3e-018
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 40 tctttggcaagtcggaagaagctgcttcgagctcagaccgagcgggagatcctgcagtcc 99
||||| |||||||| |||||| | ||||| |||||||| || ||||| || || |||||
Sbjct: 878 tctttagcaagtcgtaagaagttacttcgtgctcagacggaacgggaaattcttcagtca 819
Query: 100 ctggaccatccatttctaccaaccctgtatactcactttgagacagacaagttttcatgc 159
|| ||||| |||||||| ||||| |||| ||||| |||||||| || || ||||| |||
Sbjct: 818 cttgaccacccatttctcccaactttgtacactcattttgagacggagaaattttcgtgc 759
Query: 160 ttggttatggaattctgccc 179
||||| ||||||||||||||
Sbjct: 758 ttggtgatggaattctgccc 739
>gb|AW573887.1|AW573887 EST316478 GVN Medicago truncatula cDNA clone pGVN-49K22, mRNA
sequence
Length = 531
Score = 95.6 bits (48), Expect = 3e-018
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 40 tctttggcaagtcggaagaagctgcttcgagctcagaccgagcgggagatcctgcagtcc 99
||||| |||||||| |||||| | ||||| |||||||| || ||||| || || |||||
Sbjct: 355 tctttagcaagtcgtaagaagttacttcgtgctcagacggaacgggaaattcttcagtca 414
Query: 100 ctggaccatccatttctaccaaccctgtatactcactttgagacagacaagttttcatgc 159
|| ||||| |||||||| ||||| |||| ||||| |||||||| || || ||||| |||
Sbjct: 415 cttgaccacccatttctcccaactttgtacactcattttgagacggagaaattttcgtgc 474
Query: 160 ttggttatggaattctgccc 179
||||| ||||||||||||||
Sbjct: 475 ttggtgatggaattctgccc 494
>gb|AW776134.1|AW776134 EST335199 DSIL Medicago truncatula cDNA clone pDSIL-6M19, mRNA
sequence
Length = 614
Score = 95.6 bits (48), Expect = 3e-018
Identities = 243/308 (78%)
Strand = Plus / Plus
Query: 73 cagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccctgtatact 132
||||||||| | ||||| ||||||| || || ||||||||| |||| | |||| ||
Sbjct: 114 cagaccgagagagagatattgcagtctctcgatcatccatttttaccttcattgtacaca 173
Query: 133 cactttgagacagacaagttttcatgcttggttatggaattctgccctggaggggatctt 192
|||||||||||||| || || |||||||||||||| || || ||||| |||||||||
Sbjct: 174 cactttgagacagaatcattctcttgcttggttatggagttttgtcctggtggggatctt 233
Query: 193 cacactcttcgccaaaggcagcctggaaaatatttttcagagcaagcagcaaagttctat 252
|| | || | ||||| || ||||| |||||||||||||| || || |||| ||| |||
Sbjct: 234 catgcactcaggcaaagacaacctgggaaatatttttcagaacatgctgcaaggttttat 293
Query: 253 gtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatataccgtgat 312
||||| || || |||||||| ||||| ||| |||| |||||||| || || ||| | ||
Sbjct: 294 gtagcagaagttctccttgctttggagtacttgcacatgcttggaatcatctacagagac 353
Query: 313 cttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctgtcggacttcgat 372
||||| || ||||| || | || | |||||||| ||||| ||||| ||||| ||||||
Sbjct: 354 cttaagcccgagaacgtgttggtgagagaagatggtcacataatgctatcggatttcgat 413
Query: 373 ctatctct 380
|| |||||
Sbjct: 414 ctctctct 421
>gb|BQ165762.1|BQ165762 EST611631 KVKC Medicago truncatula cDNA clone pKVKC-11E5, mRNA
sequence
Length = 695
Score = 95.6 bits (48), Expect = 3e-018
Identities = 243/308 (78%)
Strand = Plus / Plus
Query: 73 cagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccctgtatact 132
||||||||| | ||||| ||||||| || || ||||||||| |||| | |||| ||
Sbjct: 102 cagaccgagagagagatattgcagtctctcgatcatccatttttaccttcattgtacaca 161
Query: 133 cactttgagacagacaagttttcatgcttggttatggaattctgccctggaggggatctt 192
|||||||||||||| || || |||||||||||||| || || ||||| |||||||||
Sbjct: 162 cactttgagacagaatcattctcttgcttggttatggagttttgtcctggtggggatctt 221
Query: 193 cacactcttcgccaaaggcagcctggaaaatatttttcagagcaagcagcaaagttctat 252
|| | || | ||||| || ||||| |||||||||||||| || || |||| ||| |||
Sbjct: 222 catgcactcaggcaaagacaacctgggaaatatttttcagaacatgctgcaaggttttat 281
Query: 253 gtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatataccgtgat 312
||||| || || |||||||| ||||| ||| |||| |||||||| || || ||| | ||
Sbjct: 282 gtagcagaagttctccttgctttggagtacttgcacatgcttggaatcatctacagagac 341
Query: 313 cttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctgtcggacttcgat 372
||||| || ||||| || | || | |||||||| ||||| ||||| ||||| ||||||
Sbjct: 342 cttaagcccgagaacgtgttggtgagagaagatggtcacataatgctatcggatttcgat 401
Query: 373 ctatctct 380
|| |||||
Sbjct: 402 ctctctct 409
>gb|AC141866.11| Medicago truncatula clone mth2-12p22, complete sequence
Length = 126907
Score = 95.6 bits (48), Expect = 3e-018
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 40 tctttggcaagtcggaagaagctgcttcgagctcagaccgagcgggagatcctgcagtcc 99
||||| |||||||| |||||| | ||||| |||||||| || ||||| || || |||||
Sbjct: 36212 tctttagcaagtcgtaagaagttacttcgtgctcagacggaacgggaaattcttcagtca 36153
Query: 100 ctggaccatccatttctaccaaccctgtatactcactttgagacagacaagttttcatgc 159
|| ||||| |||||||| ||||| |||| ||||| |||||||| || || ||||| |||
Sbjct: 36152 cttgaccacccatttctcccaactttgtacactcattttgagacggagaaattttcgtgc 36093
Query: 160 ttggttatggaattctgccc 179
||||| ||||||||||||||
Sbjct: 36092 ttggtgatggaattctgccc 36073
Score = 69.9 bits (35), Expect = 2e-010
Identities = 98/119 (82%)
Strand = Plus / Minus
Query: 250 tatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatataccgt 309
||||| || ||||| || || ||| |||| ||||| || |||||||||||| ||||||||
Sbjct: 35099 tatgtggcagaggtcctactggcaatggagtacctacacatgcttgggattgtataccgt 35040
Query: 310 gatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgctgtcggactt 368
|||||||| ||||| ||||| || ||| |||| ||||| || || ||||| || |||||
Sbjct: 35039 gatcttaagccagaaaatgttcttgttagggatgatggacatattatgctctccgactt 34981
>gb|CX533662.1|CX533662 s13dNF0KC03MJ018_320475 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 667
Score = 89.7 bits (45), Expect = 2e-016
Identities = 228/289 (78%)
Strand = Plus / Plus
Query: 92 tgcagtccctggaccatccatttctaccaaccctgtatactcactttgagacagacaagt 151
||||||| || || ||||||||| |||| | |||| || |||||||||||||| |
Sbjct: 24 tgcagtctctcgatcatccatttttaccttcattgtacacacactttgagacagaatcat 83
Query: 152 tttcatgcttggttatggaattctgccctggaggggatcttcacactcttcgccaaaggc 211
| || |||||||||||||| || || ||||| ||||||||||| | || | ||||| |
Sbjct: 84 tctcttgcttggttatggagttttgtcctggtggggatcttcatgcactcaggcaaagac 143
Query: 212 agcctggaaaatatttttcagagcaagcagcaaagttctatgtagctgaggtgctccttg 271
| ||||| |||||||||||||| || || |||| ||| |||||||| || || |||||||
Sbjct: 144 aacctgggaaatatttttcagaacatgctgcaaggttttatgtagcagaagttctccttg 203
Query: 272 cattggaatacctgcatatgcttgggattatataccgtgatcttaaaccagagaatgtcc 331
| ||||| ||| |||| |||||||| || || ||| | || ||||| || ||||| ||
Sbjct: 204 ctttggagtacttgcacatgcttggaatcatctacagagaccttaagcccgagaacgtgt 263
Query: 332 tcgttcgggaagatggccacatcatgctgtcggacttcgatctatctct 380
| || | |||||||| ||||| ||||| ||||| |||||||| |||||
Sbjct: 264 tggtgagagaagatggtcacataatgctatcggatttcgatctctctct 312
>gb|CX534322.1|CX534322 s13dNF0KC03MJ018_322401 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 656
Score = 89.7 bits (45), Expect = 2e-016
Identities = 228/289 (78%)
Strand = Plus / Plus
Query: 92 tgcagtccctggaccatccatttctaccaaccctgtatactcactttgagacagacaagt 151
||||||| || || ||||||||| |||| | |||| || |||||||||||||| |
Sbjct: 24 tgcagtctctcgatcatccatttttaccttcattgtacacacactttgagacagaatcat 83
Query: 152 tttcatgcttggttatggaattctgccctggaggggatcttcacactcttcgccaaaggc 211
| || |||||||||||||| || || ||||| ||||||||||| | || | ||||| |
Sbjct: 84 tctcttgcttggttatggagttttgtcctggtggggatcttcatgcactcaggcaaagac 143
Query: 212 agcctggaaaatatttttcagagcaagcagcaaagttctatgtagctgaggtgctccttg 271
| ||||| |||||||||||||| || || |||| ||| |||||||| || || |||||||
Sbjct: 144 aacctgggaaatatttttcagaacatgctgcaaggttttatgtagcagaagttctccttg 203
Query: 272 cattggaatacctgcatatgcttgggattatataccgtgatcttaaaccagagaatgtcc 331
| ||||| ||| |||| |||||||| || || ||| | || ||||| || ||||| ||
Sbjct: 204 ctttggagtacttgcacatgcttggaatcatctacagagaccttaagcccgagaacgtgt 263
Query: 332 tcgttcgggaagatggccacatcatgctgtcggacttcgatctatctct 380
| || | |||||||| ||||| ||||| ||||| |||||||| |||||
Sbjct: 264 tggtgagagaagatggtcacataatgctatcggatttcgatctctctct 312
>gb|DW016398.1|DW016398 EST1225359 MTY Medicago truncatula cDNA clone MTYAG70, mRNA
sequence
Length = 780
Score = 85.7 bits (43), Expect = 3e-015
Identities = 182/227 (80%), Gaps = 1/227 (0%)
Strand = Plus / Plus
Query: 73 cagaccgagcgggagatcctgcagtccctggaccatccatttctaccaaccctgtatact 132
||||||||| | ||||| ||||||| || || ||||||||| |||| | |||| ||
Sbjct: 528 cagaccgagagagagatattgcagtctctcgatcatccatttttaccttcattgtacaca 587
Query: 133 cactttgagacagacaagttttcatgcttggttatggaattctgccctgga-ggggatct 191
|||||||||||||| || || |||||||||||||| || || ||||| ||||||||
Sbjct: 588 cactttgagacagaatcattctcttgcttggttatggagttttgtcctgggtggggatct 647
Query: 192 tcacactcttcgccaaaggcagcctggaaaatatttttcagagcaagcagcaaagttcta 251
||| | || | ||||| || ||||| |||||||||||||| || ||||||| ||| ||
Sbjct: 648 tcatgcactcaggcaaagacaacctgggaaatatttttcagaacatgcagcaaggtttta 707
Query: 252 tgtagctgaggtgctccttgcattggaatacctgcatatgcttggga 298
|||||| || || |||||||| ||||| ||| |||| ||||||||||
Sbjct: 708 tgtagcagaagttctccttgctttggagtacttgcacatgcttggga 754
>gb|BF639193.1|BF639193 NF094G11PL1F1086 Phosphate starved leaf Medicago truncatula cDNA
clone NF094G11PL 5', mRNA sequence
Length = 668
Score = 69.9 bits (35), Expect = 2e-010
Identities = 110/135 (81%)
Strand = Plus / Plus
Query: 225 tttttcagagcaagcagcaaagttctatgtagctgaggtgctccttgcattggaatacct 284
||||||||||| |||||||| ||| ||||| ||||| || || ||||| ||||| ||| |
Sbjct: 113 tttttcagagccagcagcaaggttttatgttgctgaagtccttcttgctttggagtactt 172
Query: 285 gcatatgcttgggattatataccgtgatcttaaaccagagaatgtcctcgttcgggaaga 344
||| ||||| || || | ||||||||||| ||||||||||| | || ||||| |||||
Sbjct: 173 gcacatgctcggagttgtttaccgtgatctgaaaccagagaacattcttgttcgagaaga 232
Query: 345 tggccacatcatgct 359
|| ||||| |||||
Sbjct: 233 cggtcacattatgct 247
>gb|CX527781.1|CX527781 s13dNF47C10AT082_516074 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 640
Score = 63.9 bits (32), Expect = 1e-008
Identities = 95/116 (81%)
Strand = Plus / Plus
Query: 55 aagaagctgcttcgagctcagaccgagcgggagatcctgcagtccctggaccatccattt 114
||||||||| || |||| ||||| || ||||||| |||||| |||||||||||||||
Sbjct: 102 aagaagctgattagagcgcagacagaaagggagatattgcagttgctggaccatccattt 161
Query: 115 ctaccaaccctgtatactcactttgagacagacaagttttcatgcttggttatgga 170
||||| | |||||||| || |||||||| |||| || ||||| ||||| |||||
Sbjct: 162 ctacctatgctgtatacacattttgagaccgacagattctcatgtttggtaatgga 217
>gb|BQ140170.1|BQ140170 NF029G06PH1F1051 Phoma-infected Medicago truncatula cDNA clone
NF029G06PH 5', mRNA sequence
Length = 628
Score = 56.0 bits (28), Expect = 3e-006
Identities = 110/136 (80%), Gaps = 1/136 (0%)
Strand = Plus / Plus
Query: 225 tttttcagagcaagcagcaaagttctatgtagctgaggtgctccttgcattggaatacct 284
||||||||||| |||||||| ||| ||||| ||||| || || ||||| ||||| ||| |
Sbjct: 438 tttttcagagccagcagcaaggttttatgttgctgaagtccttcttgctttggagtactt 497
Query: 285 gcatatgcttgg-gattatataccgtgatcttaaaccagagaatgtcctcgttcgggaag 343
||| ||||| || | | | ||||||||||| ||||||||||| | || ||||| ||||
Sbjct: 498 gcacatgctcggagttgttttaccgtgatctgaaaccagagaacattcttgttcgagaag 557
Query: 344 atggccacatcatgct 359
| || ||||| |||||
Sbjct: 558 acggtcacattatgct 573
>emb|CR509054.1| mth4-7D16RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 401
Score = 44.1 bits (22), Expect = 0.010
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 222 atatttttcagagcaagcagca 243
||||||||||||||||||||||
Sbjct: 70 atatttttcagagcaagcagca 49
>gb|BG448346.1|BG448346 NF070C12EC1F1087 Elicited cell culture Medicago truncatula cDNA
clone NF070C12EC 5', mRNA sequence
Length = 541
Score = 44.1 bits (22), Expect = 0.010
Identities = 88/110 (80%)
Strand = Plus / Plus
Query: 250 tatgtagctgaggtgctccttgcattggaatacctgcatatgcttgggattatataccgt 309
||||| ||||| || || ||||| ||||| ||| |||| ||||| || || | ||||||
Sbjct: 15 tatgttgctgaagtccttcttgctttggagtacttgcacatgctcggagttgtttaccgt 74
Query: 310 gatcttaaaccagagaatgtcctcgttcgggaagatggccacatcatgct 359
||||| ||||||||||| | || ||||| ||||| || ||||| |||||
Sbjct: 75 gatctgaaaccagagaacattcttgttcgagaagacggtcacattatgct 124
>gb|AW776858.1|AW776858 EST335923 DSIL Medicago truncatula cDNA clone pDSIL-16I8, mRNA
sequence
Length = 678
Score = 42.1 bits (21), Expect = 0.040
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 313 cttaaaccagagaatgtcctc 333
|||||||||||||||||||||
Sbjct: 274 cttaaaccagagaatgtcctc 294
>gb|BI267612.1|BI267612 NF112G05IN1F1040 Insect herbivory Medicago truncatula cDNA clone
NF112G05IN 5', mRNA sequence
Length = 348
Score = 42.1 bits (21), Expect = 0.040
Identities = 64/77 (83%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 293 ttgggattatatacc-gtgatcttaaaccagagaatgtcctcgttcgggaagatggccac 351
|||||||| |||||| |||||||||| ||||| ||||| || ||| |||| ||||| ||
Sbjct: 1 ttgggattgtatacccgtgatcttaagccagaaaatgttcttgttagggatgatggacat 60
Query: 352 atcatgctgtcggactt 368
|| ||||| || |||||
Sbjct: 61 attatgctctccgactt 77
>gb|CX539214.1|CX539214 s13dNF62D12GS094_461688 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 611
Score = 42.1 bits (21), Expect = 0.040
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 313 cttaaaccagagaatgtcctc 333
|||||||||||||||||||||
Sbjct: 372 cttaaaccagagaatgtcctc 392
>gb|AC149801.3| Medicago truncatula chromosome 2 BAC clone mth2-32i15, complete
sequence
Length = 96221
Score = 42.1 bits (21), Expect = 0.040
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 313 cttaaaccagagaatgtcctc 333
|||||||||||||||||||||
Sbjct: 22754 cttaaaccagagaatgtcctc 22774
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 102,081
Number of Sequences: 392609
Number of extensions: 102081
Number of successful extensions: 7339
Number of sequences better than 0.5: 23
Number of HSP's better than 0.5 without gapping: 22
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 7297
Number of HSP's gapped (non-prelim): 33
length of query: 457
length of database: 441,732,993
effective HSP length: 19
effective length of query: 438
effective length of database: 434,273,422
effective search space: 190211758836
effective search space used: 190211758836
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)