BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAF11h01.xg.2.1
(328 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL377155.1|AL377155 MtBB29G01R1 MtBB Medicago truncatula... 74 8e-012
gb|BI272689.1|BI272689 NF024D06FL1F1057 Developing flower M... 74 8e-012
gb|CA990579.1|CA990579 EST644087 GESD Medicago truncatula c... 74 8e-012
gb|CX538323.1|CX538323 s13dNF80A11GS081_459898 Germinating ... 74 8e-012
gb|AC174296.3| Medicago truncatula clone mth2-72l21, WORKIN... 74 8e-012
gb|CA990438.1|CA990438 EST643946 GESD Medicago truncatula c... 66 2e-009
gb|CA990448.1|CA990448 EST643956 GESD Medicago truncatula c... 66 2e-009
gb|AJ500454.1|AJ500454 AJ500454 MTGIM Medicago truncatula c... 50 1e-004
gb|AJ500492.1|AJ500492 AJ500492 MTGIM Medicago truncatula c... 50 1e-004
gb|AJ499744.1|AJ499744 AJ499744 MTGIM Medicago truncatula c... 48 5e-004
gb|AJ864417.1|AJ864417 AJ864417 Medicago truncatula cv. J5 ... 48 5e-004
gb|AJ864424.1|AJ864424 AJ864424 Medicago truncatula cv. J5 ... 48 5e-004
gb|AJ500082.1|AJ500082 AJ500082 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500141.1|AJ500141 AJ500141 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500179.1|AJ500179 AJ500179 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500199.1|AJ500199 AJ500199 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500204.1|AJ500204 AJ500204 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500466.1|AJ500466 AJ500466 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500542.1|AJ500542 AJ500542 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500564.1|AJ500564 AJ500564 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500591.1|AJ500591 AJ500591 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500633.1|AJ500633 AJ500633 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500879.1|AJ500879 AJ500879 MTGIM Medicago truncatula c... 46 0.002
gb|AJ500908.1|AJ500908 AJ500908 MTGIM Medicago truncatula c... 46 0.002
gb|AJ499430.1|AJ499430 AJ499430 MTGIM Medicago truncatula c... 46 0.002
gb|AJ499636.1|AJ499636 AJ499636 MTGIM Medicago truncatula c... 46 0.002
gb|AJ499752.1|AJ499752 AJ499752 MTGIM Medicago truncatula c... 46 0.002
gb|AJ499762.1|AJ499762 AJ499762 MTGIM Medicago truncatula c... 46 0.002
gb|AJ499814.1|AJ499814 AJ499814 MTGIM Medicago truncatula c... 46 0.002
gb|AJ499850.1|AJ499850 AJ499850 MTGIM Medicago truncatula c... 46 0.002
gb|AJ548235.1|AJ548235 AJ548235 MTAPHEU Medicago truncatula... 46 0.002
gb|AJ846898.1|AJ846898 AJ846898 MtSTW Medicago truncatula c... 46 0.002
gb|AJ621860.1|AJ621860 AJ621860 Medicago truncatula J5 root... 46 0.002
gb|AJ864411.1|AJ864411 AJ864411 Medicago truncatula cv. J5 ... 46 0.002
gb|BE319818.2|BE319818 NF022C11RT1F1082 Developing root Med... 44 0.007
gb|AJ500058.1|AJ500058 AJ500058 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500142.1|AJ500142 AJ500142 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500169.1|AJ500169 AJ500169 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500181.1|AJ500181 AJ500181 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500279.1|AJ500279 AJ500279 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500313.1|AJ500313 AJ500313 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500321.1|AJ500321 AJ500321 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500346.1|AJ500346 AJ500346 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500388.1|AJ500388 AJ500388 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500399.1|AJ500399 AJ500399 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500430.1|AJ500430 AJ500430 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500506.1|AJ500506 AJ500506 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500507.1|AJ500507 AJ500507 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500541.1|AJ500541 AJ500541 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500579.1|AJ500579 AJ500579 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500615.1|AJ500615 AJ500615 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500743.1|AJ500743 AJ500743 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500744.1|AJ500744 AJ500744 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500747.1|AJ500747 AJ500747 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500758.1|AJ500758 AJ500758 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500761.1|AJ500761 AJ500761 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500834.1|AJ500834 AJ500834 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500841.1|AJ500841 AJ500841 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500874.1|AJ500874 AJ500874 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500875.1|AJ500875 AJ500875 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500913.1|AJ500913 AJ500913 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500916.1|AJ500916 AJ500916 MTGIM Medicago truncatula c... 44 0.007
gb|AJ500940.1|AJ500940 AJ500940 MTGIM Medicago truncatula c... 44 0.007
gb|AJ499251.1|AJ499251 AJ499251 MTGIM Medicago truncatula c... 44 0.007
gb|AJ499345.1|AJ499345 AJ499345 MTGIM Medicago truncatula c... 44 0.007
gb|AJ499543.1|AJ499543 AJ499543 MTGIM Medicago truncatula c... 44 0.007
gb|AJ499628.1|AJ499628 AJ499628 MTGIM Medicago truncatula c... 44 0.007
gb|AJ499713.1|AJ499713 AJ499713 MTGIM Medicago truncatula c... 44 0.007
gb|AJ499723.1|AJ499723 AJ499723 MTGIM Medicago truncatula c... 44 0.007
gb|AJ499771.1|AJ499771 AJ499771 MTGIM Medicago truncatula c... 44 0.007
gb|AJ499788.1|AJ499788 AJ499788 MTGIM Medicago truncatula c... 44 0.007
gb|AJ499978.1|AJ499978 AJ499978 MTGIM Medicago truncatula c... 44 0.007
gb|AJ499991.1|AJ499991 AJ499991 MTGIM Medicago truncatula c... 44 0.007
gb|AJ846438.1|AJ846438 AJ846438 MtSCF Medicago truncatula c... 42 0.028
gb|AJ864414.1|AJ864414 AJ864414 Medicago truncatula cv. J5 ... 42 0.028
gb|AJ864442.1|AJ864442 AJ864442 Medicago truncatula cv. J5 ... 42 0.028
gb|AJ500201.1|AJ500201 AJ500201 MTGIM Medicago truncatula c... 40 0.11
gb|AJ500217.1|AJ500217 AJ500217 MTGIM Medicago truncatula c... 40 0.11
gb|AJ500483.1|AJ500483 AJ500483 MTGIM Medicago truncatula c... 40 0.11
gb|AJ500711.1|AJ500711 AJ500711 MTGIM Medicago truncatula c... 40 0.11
gb|AJ500850.1|AJ500850 AJ500850 MTGIM Medicago truncatula c... 40 0.11
gb|BG581102.1|BG581102 EST482832 GVN Medicago truncatula cD... 38 0.44
gb|AJ500151.1|AJ500151 AJ500151 MTGIM Medicago truncatula c... 38 0.44
gb|AJ500306.1|AJ500306 AJ500306 MTGIM Medicago truncatula c... 38 0.44
gb|AJ500573.1|AJ500573 AJ500573 MTGIM Medicago truncatula c... 38 0.44
gb|AJ500679.1|AJ500679 AJ500679 MTGIM Medicago truncatula c... 38 0.44
gb|AJ500847.1|AJ500847 AJ500847 MTGIM Medicago truncatula c... 38 0.44
gb|AJ499513.1|AJ499513 AJ499513 MTGIM Medicago truncatula c... 38 0.44
gb|AJ499675.1|AJ499675 AJ499675 MTGIM Medicago truncatula c... 38 0.44
gb|AJ848780.1|AJ848780 AJ848780 MtSN4 Medicago truncatula c... 38 0.44
>gb|AL377155.1|AL377155 MtBB29G01R1 MtBB Medicago truncatula cDNA clone MtBB29G01 T7, mRNA
sequence
Length = 527
Score = 73.8 bits (37), Expect = 8e-012
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 30 gctgatgcttggattatagccaagacccattacatgccatgacttatccagtggctt 86
|||||||||||||||||| ||||| |||| ||||||||||| ||||||||||||||
Sbjct: 148 gctgatgcttggattataaccaagtcccaaaacatgccatgatttatccagtggctt 92
>gb|BI272689.1|BI272689 NF024D06FL1F1057 Developing flower Medicago truncatula cDNA clone
NF024D06FL 5', mRNA sequence
Length = 724
Score = 73.8 bits (37), Expect = 8e-012
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 30 gctgatgcttggattatagccaagacccattacatgccatgacttatccagtggctt 86
|||||||||||||||||| ||||| |||| ||||||||||| ||||||||||||||
Sbjct: 341 gctgatgcttggattataaccaagtcccaaaacatgccatgatttatccagtggctt 285
>gb|CA990579.1|CA990579 EST644087 GESD Medicago truncatula cDNA clone GESD-29M9, mRNA
sequence
Length = 679
Score = 73.8 bits (37), Expect = 8e-012
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 30 gctgatgcttggattatagccaagacccattacatgccatgacttatccagtggctt 86
|||||||||||||||||| ||||| |||| ||||||||||| ||||||||||||||
Sbjct: 454 gctgatgcttggattataaccaagtcccaaaacatgccatgatttatccagtggctt 398
>gb|CX538323.1|CX538323 s13dNF80A11GS081_459898 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 661
Score = 73.8 bits (37), Expect = 8e-012
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 30 gctgatgcttggattatagccaagacccattacatgccatgacttatccagtggctt 86
|||||||||||||||||| ||||| |||| ||||||||||| ||||||||||||||
Sbjct: 604 gctgatgcttggattataaccaagtcccaaaacatgccatgatttatccagtggctt 548
>gb|AC174296.3| Medicago truncatula clone mth2-72l21, WORKING DRAFT SEQUENCE, 9
unordered pieces
Length = 114521
Score = 73.8 bits (37), Expect = 8e-012
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 30 gctgatgcttggattatagccaagacccattacatgccatgacttatccagtggctt 86
|||||||||||||||||| ||||| |||| ||||||||||| ||||||||||||||
Sbjct: 51212 gctgatgcttggattataaccaagtcccaaaacatgccatgatttatccagtggctt 51156
>gb|CA990438.1|CA990438 EST643946 GESD Medicago truncatula cDNA clone GESD-28N7, mRNA
sequence
Length = 182
Score = 65.9 bits (33), Expect = 2e-009
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 30 gctgatgcttggattatagccaagacccattacatgccatgacttatccagtggctt 86
|||||||||||||||||| |||| |||| ||||||||||| ||||||||||||||
Sbjct: 81 gctgatgcttggattataaccaaatcccaaaacatgccatgatttatccagtggctt 25
>gb|CA990448.1|CA990448 EST643956 GESD Medicago truncatula cDNA clone GESD-28P9, mRNA
sequence
Length = 695
Score = 65.9 bits (33), Expect = 2e-009
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 30 gctgatgcttggattatagccaagacccattacatgccatgacttatccagtggctt 86
|||||||||||||||||| |||| |||| ||||||||||| ||||||||||||||
Sbjct: 320 gctgatgcttggattataaccaaatcccaaaacatgccatgatttatccagtggctt 264
>gb|AJ500454.1|AJ500454 AJ500454 MTGIM Medicago truncatula cDNA clone mtgmacc120016e11,
mRNA sequence
Length = 323
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 304 ctgtacctcggccgcgaccacgcta 328
|||||||||||||||||||||||||
Sbjct: 299 ctgtacctcggccgcgaccacgcta 323
>gb|AJ500492.1|AJ500492 AJ500492 MTGIM Medicago truncatula cDNA clone mtgmacc120017a03,
mRNA sequence
Length = 291
Score = 50.1 bits (25), Expect = 1e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 304 ctgtacctcggccgcgaccacgcta 328
|||||||||||||||||||||||||
Sbjct: 267 ctgtacctcggccgcgaccacgcta 291
>gb|AJ499744.1|AJ499744 AJ499744 MTGIM Medicago truncatula cDNA clone mtgmacc120008a04,
mRNA sequence
Length = 337
Score = 48.1 bits (24), Expect = 5e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 305 tgtacctcggccgcgaccacgcta 328
||||||||||||||||||||||||
Sbjct: 314 tgtacctcggccgcgaccacgcta 337
>gb|AJ864417.1|AJ864417 AJ864417 Medicago truncatula cv. J5 root Medicago truncatula cDNA
clone MtPfEs361, mRNA sequence
Length = 593
Score = 48.1 bits (24), Expect = 5e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 305 tgtacctcggccgcgaccacgcta 328
||||||||||||||||||||||||
Sbjct: 503 tgtacctcggccgcgaccacgcta 526
>gb|AJ864424.1|AJ864424 AJ864424 Medicago truncatula cv. J5 root Medicago truncatula cDNA
clone MtPfEs224, mRNA sequence
Length = 673
Score = 48.1 bits (24), Expect = 5e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 305 tgtacctcggccgcgaccacgcta 328
||||||||||||||||||||||||
Sbjct: 630 tgtacctcggccgcgaccacgcta 653
>gb|AJ500082.1|AJ500082 AJ500082 MTGIM Medicago truncatula cDNA clone mtgmacc120012d08,
mRNA sequence
Length = 181
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 306 gtacctcggccgcgaccacgcta 328
|||||||||||||||||||||||
Sbjct: 159 gtacctcggccgcgaccacgcta 181
>gb|AJ500141.1|AJ500141 AJ500141 MTGIM Medicago truncatula cDNA clone mtgmacc120013b10,
mRNA sequence
Length = 141
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 306 gtacctcggccgcgaccacgcta 328
|||||||||||||||||||||||
Sbjct: 119 gtacctcggccgcgaccacgcta 141
>gb|AJ500179.1|AJ500179 AJ500179 MTGIM Medicago truncatula cDNA clone mtgmacc120013f01,
mRNA sequence
Length = 355
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 306 gtacctcggccgcgaccacgcta 328
|||||||||||||||||||||||
Sbjct: 333 gtacctcggccgcgaccacgcta 355
>gb|AJ500199.1|AJ500199 AJ500199 MTGIM Medicago truncatula cDNA clone mtgmacc120013g10,
mRNA sequence
Length = 217
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 306 gtacctcggccgcgaccacgcta 328
|||||||||||||||||||||||
Sbjct: 195 gtacctcggccgcgaccacgcta 217
>gb|AJ500204.1|AJ500204 AJ500204 MTGIM Medicago truncatula cDNA clone mtgmacc120013h03,
mRNA sequence
Length = 337
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 306 gtacctcggccgcgaccacgcta 328
|||||||||||||||||||||||
Sbjct: 315 gtacctcggccgcgaccacgcta 337
>gb|AJ500466.1|AJ500466 AJ500466 MTGIM Medicago truncatula cDNA clone mtgmacc120016f12,
mRNA sequence
Length = 169
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 305 tgtacctcggccgcgaccacgct 327
|||||||||||||||||||||||
Sbjct: 23 tgtacctcggccgcgaccacgct 1
>gb|AJ500542.1|AJ500542 AJ500542 MTGIM Medicago truncatula cDNA clone mtgmacc120017e10,
mRNA sequence
Length = 302
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 306 gtacctcggccgcgaccacgcta 328
|||||||||||||||||||||||
Sbjct: 280 gtacctcggccgcgaccacgcta 302
>gb|AJ500564.1|AJ500564 AJ500564 MTGIM Medicago truncatula cDNA clone mtgmacc120017g08,
mRNA sequence
Length = 319
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 306 gtacctcggccgcgaccacgcta 328
|||||||||||||||||||||||
Sbjct: 297 gtacctcggccgcgaccacgcta 319
>gb|AJ500591.1|AJ500591 AJ500591 MTGIM Medicago truncatula cDNA clone mtgmacc120018b01,
mRNA sequence
Length = 303
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 306 gtacctcggccgcgaccacgcta 328
|||||||||||||||||||||||
Sbjct: 281 gtacctcggccgcgaccacgcta 303
>gb|AJ500633.1|AJ500633 AJ500633 MTGIM Medicago truncatula cDNA clone mtgmacc120018e08,
mRNA sequence
Length = 203
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 306 gtacctcggccgcgaccacgcta 328
|||||||||||||||||||||||
Sbjct: 181 gtacctcggccgcgaccacgcta 203
>gb|AJ500879.1|AJ500879 AJ500879 MTGIM Medicago truncatula cDNA clone mtgmacc120021b11,
mRNA sequence
Length = 332
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 306 gtacctcggccgcgaccacgcta 328
|||||||||||||||||||||||
Sbjct: 310 gtacctcggccgcgaccacgcta 332
>gb|AJ500908.1|AJ500908 AJ500908 MTGIM Medicago truncatula cDNA clone mtgmacc120021e07,
mRNA sequence
Length = 308
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 306 gtacctcggccgcgaccacgcta 328
|||||||||||||||||||||||
Sbjct: 286 gtacctcggccgcgaccacgcta 308
>gb|AJ499430.1|AJ499430 AJ499430 MTGIM Medicago truncatula cDNA clone mtgmacc120004b10,
mRNA sequence
Length = 169
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 305 tgtacctcggccgcgaccacgct 327
|||||||||||||||||||||||
Sbjct: 23 tgtacctcggccgcgaccacgct 1
>gb|AJ499636.1|AJ499636 AJ499636 MTGIM Medicago truncatula cDNA clone mtgmacc120006f02,
mRNA sequence
Length = 291
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 306 gtacctcggccgcgaccacgcta 328
|||||||||||||||||||||||
Sbjct: 269 gtacctcggccgcgaccacgcta 291
>gb|AJ499752.1|AJ499752 AJ499752 MTGIM Medicago truncatula cDNA clone mtgmacc120008b01,
mRNA sequence
Length = 321
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 305 tgtacctcggccgcgaccacgct 327
|||||||||||||||||||||||
Sbjct: 23 tgtacctcggccgcgaccacgct 1
>gb|AJ499762.1|AJ499762 AJ499762 MTGIM Medicago truncatula cDNA clone mtgmacc120008b12,
mRNA sequence
Length = 350
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 306 gtacctcggccgcgaccacgcta 328
|||||||||||||||||||||||
Sbjct: 328 gtacctcggccgcgaccacgcta 350
>gb|AJ499814.1|AJ499814 AJ499814 MTGIM Medicago truncatula cDNA clone mtgmacc120008g12,
mRNA sequence
Length = 261
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 306 gtacctcggccgcgaccacgcta 328
|||||||||||||||||||||||
Sbjct: 239 gtacctcggccgcgaccacgcta 261
>gb|AJ499850.1|AJ499850 AJ499850 MTGIM Medicago truncatula cDNA clone mtgmacc120009c12,
mRNA sequence
Length = 338
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 306 gtacctcggccgcgaccacgcta 328
|||||||||||||||||||||||
Sbjct: 316 gtacctcggccgcgaccacgcta 338
>gb|AJ548235.1|AJ548235 AJ548235 MTAPHEU Medicago truncatula cDNA clone mtaehac110002e11,
mRNA sequence
Length = 90
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 306 gtacctcggccgcgaccacgcta 328
|||||||||||||||||||||||
Sbjct: 36 gtacctcggccgcgaccacgcta 14
>gb|AJ846898.1|AJ846898 AJ846898 MtSTW Medicago truncatula cDNA clone MtTW01A03N1, mRNA
sequence
Length = 196
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 306 gtacctcggccgcgaccacgcta 328
|||||||||||||||||||||||
Sbjct: 174 gtacctcggccgcgaccacgcta 196
>gb|AJ621860.1|AJ621860 AJ621860 Medicago truncatula J5 roots Medicago truncatula cDNA
clone MtGmEs470, mRNA sequence
Length = 1151
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 306 gtacctcggccgcgaccacgcta 328
|||||||||||||||||||||||
Sbjct: 527 gtacctcggccgcgaccacgcta 549
>gb|AJ864411.1|AJ864411 AJ864411 Medicago truncatula cv. J5 root Medicago truncatula cDNA
clone MtPfEs313, mRNA sequence
Length = 500
Score = 46.1 bits (23), Expect = 0.002
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 306 gtacctcggccgcgaccacgcta 328
|||||||||||||||||||||||
Sbjct: 75 gtacctcggccgcgaccacgcta 53
>gb|BE319818.2|BE319818 NF022C11RT1F1082 Developing root Medicago truncatula cDNA clone
NF022C11RT 5', mRNA sequence
Length = 552
Score = 44.1 bits (22), Expect = 0.007
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 61 acatgccatgacttatccagtggctt 86
||||||||||| ||||||||||||||
Sbjct: 526 acatgccatgatttatccagtggctt 501
>gb|AJ500058.1|AJ500058 AJ500058 MTGIM Medicago truncatula cDNA clone mtgmacc120012b02,
mRNA sequence
Length = 182
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 306 gtacctcggccgcgaccacgct 327
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500142.1|AJ500142 AJ500142 MTGIM Medicago truncatula cDNA clone mtgmacc120013b11,
mRNA sequence
Length = 198
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 306 gtacctcggccgcgaccacgct 327
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500169.1|AJ500169 AJ500169 MTGIM Medicago truncatula cDNA clone mtgmacc120013e03,
mRNA sequence
Length = 287
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 306 gtacctcggccgcgaccacgct 327
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500181.1|AJ500181 AJ500181 MTGIM Medicago truncatula cDNA clone mtgmacc120013f03,
mRNA sequence
Length = 614
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 306 gtacctcggccgcgaccacgct 327
||||||||||||||||||||||
Sbjct: 248 gtacctcggccgcgaccacgct 227
>gb|AJ500279.1|AJ500279 AJ500279 MTGIM Medicago truncatula cDNA clone mtgmacc120014f08,
mRNA sequence
Length = 113
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 306 gtacctcggccgcgaccacgct 327
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500313.1|AJ500313 AJ500313 MTGIM Medicago truncatula cDNA clone mtgmacc120015a09,
mRNA sequence
Length = 317
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 306 gtacctcggccgcgaccacgct 327
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500321.1|AJ500321 AJ500321 MTGIM Medicago truncatula cDNA clone mtgmacc120015b05,
mRNA sequence
Length = 233
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 306 gtacctcggccgcgaccacgct 327
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500346.1|AJ500346 AJ500346 MTGIM Medicago truncatula cDNA clone mtgmacc120015d06,
mRNA sequence
Length = 317
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 306 gtacctcggccgcgaccacgct 327
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500388.1|AJ500388 AJ500388 MTGIM Medicago truncatula cDNA clone mtgmacc120015h02,
mRNA sequence
Length = 156
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 306 gtacctcggccgcgaccacgct 327
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500399.1|AJ500399 AJ500399 MTGIM Medicago truncatula cDNA clone mtgmacc120016a01,
mRNA sequence
Length = 315
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 306 gtacctcggccgcgaccacgct 327
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500430.1|AJ500430 AJ500430 MTGIM Medicago truncatula cDNA clone mtgmacc120016c11,
mRNA sequence
Length = 345
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 306 gtacctcggccgcgaccacgct 327
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500506.1|AJ500506 AJ500506 MTGIM Medicago truncatula cDNA clone mtgmacc120017b07,
mRNA sequence
Length = 337
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 306 gtacctcggccgcgaccacgct 327
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500507.1|AJ500507 AJ500507 MTGIM Medicago truncatula cDNA clone mtgmacc120017b08,
mRNA sequence
Length = 247
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 306 gtacctcggccgcgaccacgct 327
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500541.1|AJ500541 AJ500541 MTGIM Medicago truncatula cDNA clone mtgmacc120017e09,
mRNA sequence
Length = 294
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 306 gtacctcggccgcgaccacgct 327
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
>gb|AJ500579.1|AJ500579 AJ500579 MTGIM Medicago truncatula cDNA clone mtgmacc120017h12,
mRNA sequence
Length = 210
Score = 44.1 bits (22), Expect = 0.007
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 306 gtacctcggccgcgaccacgct 327
||||||||||||||||||||||
Sbjct: 22 gtacctcggccgcgaccacgct 1
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 51,505
Number of Sequences: 392609
Number of extensions: 51505
Number of successful extensions: 3937
Number of sequences better than 0.5: 91
Number of HSP's better than 0.5 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3840
Number of HSP's gapped (non-prelim): 97
length of query: 328
length of database: 441,732,993
effective HSP length: 19
effective length of query: 309
effective length of database: 434,273,422
effective search space: 134190487398
effective search space used: 134190487398
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)