BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAC22h02.sg.3.6
(2204 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF638558.1|BF638558 NF054E05PL1F1037 Phosphate starved l... 129 1e-027
gb|BG450609.1|BG450609 NF034B11DT1F1093 Drought Medicago tr... 129 1e-027
gb|BI273042.1|BI273042 NF043D10FL1F1089 Developing flower M... 129 1e-027
gb|CX520187.1|CX520187 s13dNF41G02VI008_444426 Virus-Infect... 129 1e-027
gb|DW018510.1|DW018510 EST1227471 MTY Medicago truncatula c... 129 1e-027
gb|BF636750.1|BF636750 NF002C02LF1F1007 Developing leaf Med... 115 2e-023
gb|BF641880.1|BF641880 NF057B03IN1F1028 Insect herbivory Me... 111 3e-022
gb|AL388077.1|AL388077 MtBC46E03F1 MtBC Medicago truncatula... 105 2e-020
gb|AW257369.1|AW257369 EST305506 KV2 Medicago truncatula cD... 82 2e-013
gb|BE323861.2|BE323861 NF009E07PL1F1051 Phosphate starved l... 74 6e-011
gb|BG454826.1|BG454826 NF106H06LF1F1057 Developing leaf Med... 72 2e-010
gb|BQ137320.1|BQ137320 NF062A09ST1F1000 Developing stem Med... 72 2e-010
gb|BF634479.1|BF634479 NF061E09DT1F1070 Drought Medicago tr... 68 3e-009
gb|AC127169.13| Medicago truncatula clone mth2-36n3, comple... 64 5e-008
gb|AL383136.1|AL383136 MtBC12A08F1 MtBC Medicago truncatula... 62 2e-007
gb|BF518435.1|BF518435 EST455882 DSIL Medicago truncatula c... 62 2e-007
gb|BQ140650.1|BQ140650 NF038E10PH1F1083 Phoma-infected Medi... 58 3e-006
>gb|BF638558.1|BF638558 NF054E05PL1F1037 Phosphate starved leaf Medicago truncatula cDNA
clone NF054E05PL 5', mRNA sequence
Length = 690
Score = 129 bits (65), Expect = 1e-027
Identities = 116/133 (87%)
Strand = Plus / Plus
Query: 1340 ttgagtgcaaccatgctactctatctggacacagctgccatcatgaattggagactgcac 1399
|||||||||||||||| ||||||||||| ||||| ||||||||||| | || ||||||
Sbjct: 147 ttgagtgcaaccatgccactctatctggtcacagttgccatcatgagcttgaaactgcaa 206
Query: 1400 ggattaatgggctgcttggaaatatcgatgcaaacactggtgatcctcaagttggttggg 1459
|||| ||||| | | || |||||||||||||| |||||||||||||||||||||||||
Sbjct: 207 ggatcaatggattattgggtaatatcgatgcaaatactggtgatcctcaagttggttggg 266
Query: 1460 acacagatcagtt 1472
|||| ||||||||
Sbjct: 267 acacggatcagtt 279
Score = 81.8 bits (41), Expect = 2e-013
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 1522 aatggtggacttgcacctggtggtttcaactttgatgccaaattgcggagggaaagtact 1581
||||||||| ||||||| ||||| |||||||||||||||||||||||||| || || ||
Sbjct: 329 aatggtggaattgcaccaggtggattcaactttgatgccaaattgcggagagagagcaca 388
Query: 1582 gatgttgaggacatgtt 1598
|||||||| ||| ||||
Sbjct: 389 gatgttgaagacttgtt 405
>gb|BG450609.1|BG450609 NF034B11DT1F1093 Drought Medicago truncatula cDNA clone NF034B11DT
5', mRNA sequence
Length = 669
Score = 129 bits (65), Expect = 1e-027
Identities = 116/133 (87%)
Strand = Plus / Plus
Query: 1340 ttgagtgcaaccatgctactctatctggacacagctgccatcatgaattggagactgcac 1399
|||||||||||||||| ||||||||||| ||||| ||||||||||| | || ||||||
Sbjct: 309 ttgagtgcaaccatgccactctatctggtcacagttgccatcatgagcttgaaactgcaa 368
Query: 1400 ggattaatgggctgcttggaaatatcgatgcaaacactggtgatcctcaagttggttggg 1459
|||| ||||| | | || |||||||||||||| |||||||||||||||||||||||||
Sbjct: 369 ggatcaatggattattgggtaatatcgatgcaaatactggtgatcctcaagttggttggg 428
Query: 1460 acacagatcagtt 1472
|||| ||||||||
Sbjct: 429 acacggatcagtt 441
Score = 85.7 bits (43), Expect = 1e-014
Identities = 187/235 (79%)
Strand = Plus / Plus
Query: 1045 caagttaagaaagctttggaggtcactcactacctaggtggtgaaaactatgtgttctgg 1104
||||| |||||||| |||||||| || || || | || || ||||| |||||||| |||
Sbjct: 14 caagtgaagaaagccttggaggtgacacattatttggggggagaaaattatgtgttttgg 73
Query: 1105 ggtggaagagagggttaccaaactcttctgaatactgatatgaagagagaacttgaccat 1164
|| || |||||||||||||| ||||| |||| || |||||| | |||| ||| | |||
Sbjct: 74 ggcggtcgagagggttaccaatctcttttgaacacagatatggaacgagagcttaatcat 133
Query: 1165 ctggctaactttcttcaagctgctgttgactacaagaagaagattggattcaacggaaca 1224
|||||| ||| || |||||||||||| |||| |||||||| |||||||| || |||
Sbjct: 134 ttggctagattttttgaagctgctgttgcacacaaaaagaagatcggattcaatgggaca 193
Query: 1225 ctattgatagagcctaaaccacaggaaccaacaaaacaccagtatgactgggatg 1279
| || || || || || ||||| ||||| |||||||| |||||||| |||||||
Sbjct: 194 tttttaattgaaccaaagccacaagaacctacaaaacatcagtatgattgggatg 248
Score = 81.8 bits (41), Expect = 2e-013
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 1522 aatggtggacttgcacctggtggtttcaactttgatgccaaattgcggagggaaagtact 1581
||||||||| ||||||| ||||| |||||||||||||||||||||||||| || || ||
Sbjct: 491 aatggtggaattgcaccaggtggattcaactttgatgccaaattgcggagagagagcaca 550
Query: 1582 gatgttgaggacatgtt 1598
|||||||| ||| ||||
Sbjct: 551 gatgttgaagacttgtt 567
>gb|BI273042.1|BI273042 NF043D10FL1F1089 Developing flower Medicago truncatula cDNA clone
NF043D10FL 5', mRNA sequence
Length = 694
Score = 129 bits (65), Expect = 1e-027
Identities = 116/133 (87%)
Strand = Plus / Plus
Query: 1340 ttgagtgcaaccatgctactctatctggacacagctgccatcatgaattggagactgcac 1399
|||||||||||||||| ||||||||||| ||||| ||||||||||| | || ||||||
Sbjct: 38 ttgagtgcaaccatgccactctatctggtcacagttgccatcatgagcttgaaactgcaa 97
Query: 1400 ggattaatgggctgcttggaaatatcgatgcaaacactggtgatcctcaagttggttggg 1459
|||| ||||| | | || |||||||||||||| |||||||||||||||||||||||||
Sbjct: 98 ggatcaatggattattgggtaatatcgatgcaaatactggtgatcctcaagttggttggg 157
Query: 1460 acacagatcagtt 1472
|||| ||||||||
Sbjct: 158 acacggatcagtt 170
Score = 75.8 bits (38), Expect = 1e-011
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 1525 ggtggacttgcacctggtggtttcaactttgatgccaaattgcggagggaaagtactgat 1584
|||||| ||||||| ||||| |||||||||||||||||||||||||| || || || |||
Sbjct: 344 ggtggaattgcaccaggtggattcaactttgatgccaaattgcggagagagagcacagat 403
Query: 1585 gttgaggacatgtt 1598
||||| ||| ||||
Sbjct: 404 gttgaagacttgtt 417
>gb|CX520187.1|CX520187 s13dNF41G02VI008_444426 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 463
Score = 129 bits (65), Expect = 1e-027
Identities = 116/133 (87%)
Strand = Plus / Plus
Query: 1340 ttgagtgcaaccatgctactctatctggacacagctgccatcatgaattggagactgcac 1399
|||||||||||||||| ||||||||||| ||||| ||||||||||| | || ||||||
Sbjct: 104 ttgagtgcaaccatgccactctatctggtcacagttgccatcatgagcttgaaactgcaa 163
Query: 1400 ggattaatgggctgcttggaaatatcgatgcaaacactggtgatcctcaagttggttggg 1459
|||| ||||| | | || |||||||||||||| |||||||||||||||||||||||||
Sbjct: 164 ggatcaatggattattgggtaatatcgatgcaaatactggtgatcctcaagttggttggg 223
Query: 1460 acacagatcagtt 1472
|||| ||||||||
Sbjct: 224 acacggatcagtt 236
Score = 81.8 bits (41), Expect = 2e-013
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 1522 aatggtggacttgcacctggtggtttcaactttgatgccaaattgcggagggaaagtact 1581
||||||||| ||||||| ||||| |||||||||||||||||||||||||| || || ||
Sbjct: 286 aatggtggaattgcaccaggtggattcaactttgatgccaaattgcggagagagagcaca 345
Query: 1582 gatgttgaggacatgtt 1598
|||||||| ||| ||||
Sbjct: 346 gatgttgaagacttgtt 362
>gb|DW018510.1|DW018510 EST1227471 MTY Medicago truncatula cDNA clone MTYB745, mRNA sequence
Length = 833
Score = 129 bits (65), Expect = 1e-027
Identities = 116/133 (87%)
Strand = Plus / Plus
Query: 1340 ttgagtgcaaccatgctactctatctggacacagctgccatcatgaattggagactgcac 1399
|||||||||||||||| ||||||||||| ||||| ||||||||||| | || ||||||
Sbjct: 321 ttgagtgcaaccatgccactctatctggtcacagttgccatcatgagcttgaaactgcaa 380
Query: 1400 ggattaatgggctgcttggaaatatcgatgcaaacactggtgatcctcaagttggttggg 1459
|||| ||||| | | || |||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 ggatcaatggattattgggtaatatcgatgcaaatactggtgatcctcaagttggttggg 440
Query: 1460 acacagatcagtt 1472
|||| ||||||||
Sbjct: 441 acacggatcagtt 453
Score = 87.7 bits (44), Expect = 4e-015
Identities = 200/252 (79%)
Strand = Plus / Plus
Query: 1028 atgcttatgcggctgcacaagttaagaaagctttggaggtcactcactacctaggtggtg 1087
|||| ||||| || || ||||| |||||||| |||||||| || || || | || || |
Sbjct: 9 atgcatatgctgcggctcaagtgaagaaagccttggaggtgacacattatttggggggag 68
Query: 1088 aaaactatgtgttctggggtggaagagagggttaccaaactcttctgaatactgatatga 1147
|||| |||||||| ||||| || |||||||||||||| ||||| |||| || ||||||
Sbjct: 69 aaaattatgtgttttggggcggtcgagagggttaccaatctcttttgaacacagatatgg 128
Query: 1148 agagagaacttgaccatctggctaactttcttcaagctgctgttgactacaagaagaaga 1207
| |||| ||| | ||| |||||| ||| || |||||||||||| |||| |||||||
Sbjct: 129 aacgagagcttaatcatttggctagattttttgaagctgctgttgcacacaaaaagaaga 188
Query: 1208 ttggattcaacggaacactattgatagagcctaaaccacaggaaccaacaaaacaccagt 1267
| |||||||| || ||| | || || || || || ||||| ||||| |||||||| ||||
Sbjct: 189 tcggattcaatgggacatttttaattgaaccaaagccacaagaacctacaaaacatcagt 248
Query: 1268 atgactgggatg 1279
|||| |||||||
Sbjct: 249 atgattgggatg 260
Score = 81.8 bits (41), Expect = 2e-013
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 1522 aatggtggacttgcacctggtggtttcaactttgatgccaaattgcggagggaaagtact 1581
||||||||| ||||||| ||||| |||||||||||||||||||||||||| || || ||
Sbjct: 503 aatggtggaattgcaccaggtggattcaactttgatgccaaattgcggagagagagcaca 562
Query: 1582 gatgttgaggacatgtt 1598
|||||||| ||| ||||
Sbjct: 563 gatgttgaagacttgtt 579
>gb|BF636750.1|BF636750 NF002C02LF1F1007 Developing leaf Medicago truncatula cDNA clone
NF002C02LF 5', mRNA sequence
Length = 561
Score = 115 bits (58), Expect = 2e-023
Identities = 116/134 (86%), Gaps = 1/134 (0%)
Strand = Plus / Plus
Query: 1340 ttgagtgcaaccatgctactctatctggacacagctgccatcatgaattggagactgcac 1399
|||||||||||||||| ||||||||||| ||||| ||||||||||| | || ||||||
Sbjct: 393 ttgagtgcaaccatgccactctatctggtcacagttgccatcatgagcttgaaactgcaa 452
Query: 1400 ggattaatgggctgcttggaaatatcgatgcaaacactggtgatcctc-aagttggttgg 1458
|||| ||||| | | || |||||||||||||| ||||||||||||| |||||||||||
Sbjct: 453 ggatcaatggattattgggtaatatcgatgcaaatactggtgatcctcaaagttggttgg 512
Query: 1459 gacacagatcagtt 1472
||||| ||||||||
Sbjct: 513 gacacggatcagtt 526
Score = 103 bits (52), Expect = 6e-020
Identities = 242/304 (79%), Gaps = 1/304 (0%)
Strand = Plus / Plus
Query: 977 tgcatcctcgttacatgcatggcgct-gctactagcccagaggttaaagtatatgcttat 1035
||||||||||||| |||||||| ||| ||||||||| | ||| | ||| ||||| |||
Sbjct: 29 tgcatcctcgttatatgcatggtgctagctactagctccgagttagcagtgtatgcatat 88
Query: 1036 gcggctgcacaagttaagaaagctttggaggtcactcactacctaggtggtgaaaactat 1095
|| || || ||||| |||||||| |||||||| || || || | || || ||||| |||
Sbjct: 89 gctgcggctcaagtgaagaaagccttggaggtgacacattatttggggggagaaaattat 148
Query: 1096 gtgttctggggtggaagagagggttaccaaactcttctgaatactgatatgaagagagaa 1155
||||| ||||| || |||||||||||||| ||||| |||| || |||||| | ||||
Sbjct: 149 gtgttttggggcggtcgagagggttaccaatctcttttgaacacagatatggaacgagag 208
Query: 1156 cttgaccatctggctaactttcttcaagctgctgttgactacaagaagaagattggattc 1215
||| | ||| |||||| ||| || |||||||||||| |||| |||||||| ||||||
Sbjct: 209 cttaatcatttggctagattttttgaagctgctgttgcacacaaaaagaagatcggattc 268
Query: 1216 aacggaacactattgatagagcctaaaccacaggaaccaacaaaacaccagtatgactgg 1275
|| || ||| | || || || || || ||||| ||||| |||||||| |||||||| |||
Sbjct: 269 aatgggacatttttaattgaaccaaagccacaagaacctacaaaacatcagtatgattgg 328
Query: 1276 gatg 1279
||||
Sbjct: 329 gatg 332
>gb|BF641880.1|BF641880 NF057B03IN1F1028 Insect herbivory Medicago truncatula cDNA clone
NF057B03IN 5', mRNA sequence
Length = 654
Score = 111 bits (56), Expect = 3e-022
Identities = 241/303 (79%)
Strand = Plus / Plus
Query: 977 tgcatcctcgttacatgcatggcgctgctactagcccagaggttaaagtatatgcttatg 1036
||||||||||||| |||||||| |||||||||||| | ||| | ||| ||||| ||||
Sbjct: 264 tgcatcctcgttatatgcatggtgctgctactagctccgagttagcagtgtatgcatatg 323
Query: 1037 cggctgcacaagttaagaaagctttggaggtcactcactacctaggtggtgaaaactatg 1096
| || || ||||| |||||||| |||||||| || || || | || || ||||| ||||
Sbjct: 324 ctgcggctcaagtgaagaaagccttggaggtgacacattatttggggggagaaaattatg 383
Query: 1097 tgttctggggtggaagagagggttaccaaactcttctgaatactgatatgaagagagaac 1156
|||| ||||| || |||||||||||||| ||||| |||| || |||||| | |||| |
Sbjct: 384 tgttttggggcggtcgagagggttaccaatctcttttgaacacagatatggaacgagagc 443
Query: 1157 ttgaccatctggctaactttcttcaagctgctgttgactacaagaagaagattggattca 1216
|| | ||| |||||| ||| || |||||||||||| |||| |||||||| |||||||
Sbjct: 444 ttaatcatttggctagattttttgaagctgctgttgcacacaaaaagaagatcggattca 503
Query: 1217 acggaacactattgatagagcctaaaccacaggaaccaacaaaacaccagtatgactggg 1276
| || ||| | || || || || || ||||| ||||| |||||||| || ||||| ||||
Sbjct: 504 atgggacatttttaattgaaccaaagccacaagaacctacaaaacatcantatgattggg 563
Query: 1277 atg 1279
|||
Sbjct: 564 atg 566
Score = 60.0 bits (30), Expect = 8e-007
Identities = 96/118 (81%)
Strand = Plus / Plus
Query: 771 catggctaagagaagaatgagagctcactttgagttcatggagaagttgggagttgacaa 830
||||||||| |||||||||||||| | ||||||||||| | || | ||||| ||
Sbjct: 58 catggctaaaagaagaatgagagcaaattttgagttcataaacaaacttggagtcgattt 117
Query: 831 atggtgcttccatgacagggatattgccccggatgggaagactcttgaagaaacaaat 888
||||||||||| ||||||||||| || || |||||||||||| |||| ||| |||||
Sbjct: 118 ctggtgcttccacgacagggatatagctcctgatgggaagactattgaggaatcaaat 175
>gb|AL388077.1|AL388077 MtBC46E03F1 MtBC Medicago truncatula cDNA clone MtBC46E03 T3, mRNA
sequence
Length = 450
Score = 105 bits (53), Expect = 2e-020
Identities = 104/121 (85%)
Strand = Plus / Plus
Query: 1352 atgctactctatctggacacagctgccatcatgaattggagactgcacggattaatgggc 1411
|||| ||||||||||| ||||| ||||||||||| | || |||||| |||| |||||
Sbjct: 1 atgccactctatctggtcacagttgccatcatgagcttgaaactgcaaggatcaatggat 60
Query: 1412 tgcttggaaatatcgatgcaaacactggtgatcctcaagttggttgggacacagatcagt 1471
| | || |||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 61 tattgggtaatatcgatgcaaatactggtgatcctcaagttggttgggacacggatcagt 120
Query: 1472 t 1472
|
Sbjct: 121 t 121
Score = 81.8 bits (41), Expect = 2e-013
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 1522 aatggtggacttgcacctggtggtttcaactttgatgccaaattgcggagggaaagtact 1581
||||||||| ||||||| ||||| |||||||||||||||||||||||||| || || ||
Sbjct: 171 aatggtggaattgcaccaggtggattcaactttgatgccaaattgcggagagagagcaca 230
Query: 1582 gatgttgaggacatgtt 1598
|||||||| ||| ||||
Sbjct: 231 gatgttgaagacttgtt 247
>gb|AW257369.1|AW257369 EST305506 KV2 Medicago truncatula cDNA clone KV2-9M14, mRNA sequence
Length = 667
Score = 81.8 bits (41), Expect = 2e-013
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 1522 aatggtggacttgcacctggtggtttcaactttgatgccaaattgcggagggaaagtact 1581
||||||||| ||||||| ||||| |||||||||||||||||||||||||| || || ||
Sbjct: 622 aatggtggaattgcaccaggtggattcaactttgatgccaaattgcggagagagagcaca 563
Query: 1582 gatgttgaggacatgtt 1598
|||||||| ||| ||||
Sbjct: 562 gatgttgaagacttgtt 546
>gb|BE323861.2|BE323861 NF009E07PL1F1051 Phosphate starved leaf Medicago truncatula cDNA
clone NF009E07PL 5', mRNA sequence
Length = 471
Score = 73.8 bits (37), Expect = 6e-011
Identities = 199/253 (78%)
Strand = Plus / Plus
Query: 636 gattctcggtaagaagatgaaggattggatgcgcttcagtgttgcgttctggcacacgtt 695
|||||| || |||||||||||||||||| | | || |||||||| || ||||| || ||
Sbjct: 7 gattcttgggaagaagatgaaggattggttcagatttagtgttgcattttggcatacatt 66
Query: 696 ccgtggtactggcgctgatcctttcggtgctcctacaaagacttggccttgggaggacgg 755
|||||| || || | ||| || || ||||| ||||| || |||||| ||||| || ||
Sbjct: 67 ccgtggaacaggtgttgacccatttggtgcacctaccaaatattggccatgggaagatgg 126
Query: 756 cacaaattctttggccatggctaagagaagaatgagagctcactttgagttcatggagaa 815
|| ||||| || ||||||||| |||||||||||||| | ||||||||||| | ||
Sbjct: 127 taccaattcattaagcatggctaaaagaagaatgagagcaaattttgagttcataaacaa 186
Query: 816 gttgggagttgacaaatggtgcttccatgacagggatattgccccggatgggaagactct 875
| ||||| || ||||||||||| ||||||||||| || || |||||||||||| |
Sbjct: 187 acttggagtcgatttctggtgcttccacgacagggatatagctcctgatgggaagactat 246
Query: 876 tgaagaaacaaat 888
||| ||| |||||
Sbjct: 247 tgaggaatcaaat 259
Score = 54.0 bits (27), Expect = 5e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 977 tgcatcctcgttacatgcatggcgctgctactagc 1011
||||||||||||| |||||||| ||||||||||||
Sbjct: 348 tgcatcctcgttatatgcatggtgctgctactagc 382
>gb|BG454826.1|BG454826 NF106H06LF1F1057 Developing leaf Medicago truncatula cDNA clone
NF106H06LF 5', mRNA sequence
Length = 675
Score = 71.9 bits (36), Expect = 2e-010
Identities = 198/252 (78%)
Strand = Plus / Plus
Query: 637 attctcggtaagaagatgaaggattggatgcgcttcagtgttgcgttctggcacacgttc 696
||||| || |||||||||||||||||| | | || |||||||| || ||||| || |||
Sbjct: 302 attcttgggaagaagatgaaggattggttcagatttagtgttgcattttggcatacattc 361
Query: 697 cgtggtactggcgctgatcctttcggtgctcctacaaagacttggccttgggaggacggc 756
||||| || || | ||| || || ||||| ||||| || |||||| ||||| || ||
Sbjct: 362 cgtggaacaggtgttgacccatttggtgcacctaccaaatattggccatgggaagatggt 421
Query: 757 acaaattctttggccatggctaagagaagaatgagagctcactttgagttcatggagaag 816
|| ||||| || ||||||||| |||||||||||||| | ||||||||||| | ||
Sbjct: 422 accaattcattaagcatggctaaaagaagaatgagagcaaattttgagttcataaacaaa 481
Query: 817 ttgggagttgacaaatggtgcttccatgacagggatattgccccggatgggaagactctt 876
| ||||| || ||||||||||| ||||||||||| || || |||||||||||| ||
Sbjct: 482 cttggagtcgatttctggtgcttccacgacagggatatagctcctgatgggaagactatt 541
Query: 877 gaagaaacaaat 888
|| ||| |||||
Sbjct: 542 gaggaatcaaat 553
>gb|BQ137320.1|BQ137320 NF062A09ST1F1000 Developing stem Medicago truncatula cDNA clone
NF062A09ST 5', mRNA sequence
Length = 940
Score = 71.9 bits (36), Expect = 2e-010
Identities = 135/168 (80%)
Strand = Plus / Plus
Query: 1112 gagagggttaccaaactcttctgaatactgatatgaagagagaacttgaccatctggcta 1171
|||||||||||||| ||||| |||| || |||||| | |||| ||| | ||| ||||||
Sbjct: 184 gagagggttaccaatctcttttgaacacagatatggaacgagagcttaatcatttggcta 243
Query: 1172 actttcttcaagctgctgttgactacaagaagaagattggattcaacggaacactattga 1231
||| || |||||||||||| |||| |||||||| |||||||| || ||| | || |
Sbjct: 244 gattttttgaagctgctgttgcacacaaaaagaagatcggattcaatgggacatttttaa 303
Query: 1232 tagagcctaaaccacaggaaccaacaaaacaccagtatgactgggatg 1279
| || || || ||||| ||||| |||||||| |||||||| |||||||
Sbjct: 304 ttgaaccaaagccacaagaacctacaaaacatcagtatgattgggatg 351
Score = 67.9 bits (34), Expect = 3e-009
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 1340 ttgagtgcaaccatgctactctatctggacacagctgccatcatga 1385
|||||||||||||||| ||||||||||| ||||| |||||||||||
Sbjct: 412 ttgagtgcaaccatgccactctatctggtcacagttgccatcatga 457
>gb|BF634479.1|BF634479 NF061E09DT1F1070 Drought Medicago truncatula cDNA clone NF061E09DT
5', mRNA sequence
Length = 682
Score = 67.9 bits (34), Expect = 3e-009
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 1522 aatggtggacttgcacctggtggtttcaactttgatgccaaattgc 1567
||||||||| ||||||| ||||| ||||||||||||||||||||||
Sbjct: 38 aatggtggaattgcaccaggtggattcaactttgatgccaaattgc 83
>gb|AC127169.13| Medicago truncatula clone mth2-36n3, complete sequence
Length = 124554
Score = 63.9 bits (32), Expect = 5e-008
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 1420 aatatcgatgcaaacactggtgatcctcaagttggt 1455
|||||||||||||| |||||||||||||||||||||
Sbjct: 86090 aatatcgatgcaaatactggtgatcctcaagttggt 86055
Score = 60.0 bits (30), Expect = 8e-007
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 1525 ggtggacttgcacctggtggtttcaactttgatgccaaattg 1566
|||||| ||||||| ||||| |||||||||||||||||||||
Sbjct: 85749 ggtggaattgcaccaggtggattcaactttgatgccaaattg 85708
Score = 54.0 bits (27), Expect = 5e-005
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 832 tggtgcttccatgacagggatattgccccggatgggaagactcttga 878
||||||||||| ||||||||||| || || |||||||||||| ||||
Sbjct: 88242 tggtgcttccacgacagggatatagctcctgatgggaagactattga 88196
Score = 52.0 bits (26), Expect = 2e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 977 tgcatcctcgttacatgcatggcgctgctactag 1010
||||||||||||| |||||||| |||||||||||
Sbjct: 87688 tgcatcctcgttatatgcatggtgctgctactag 87655
Score = 52.0 bits (26), Expect = 2e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 1340 ttgagtgcaaccatgctactctatctggacacag 1373
|||||||||||||||| ||||||||||| |||||
Sbjct: 86278 ttgagtgcaaccatgccactctatctggtcacag 86245
Score = 48.1 bits (24), Expect = 0.003
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 1087 gaaaactatgtgttctggggtggaagagagggttaccaaactcttctgaatactgatatg 1146
||||| |||||||| ||||| || |||||||||||||| ||||| |||| || ||||||
Sbjct: 87399 gaaaattatgtgttttggggcggtcgagagggttaccaatctcttttgaacacagatatg 87340
>gb|AL383136.1|AL383136 MtBC12A08F1 MtBC Medicago truncatula cDNA clone MtBC12A08 T3, mRNA
sequence
Length = 139
Score = 61.9 bits (31), Expect = 2e-007
Identities = 76/91 (83%)
Strand = Plus / Plus
Query: 977 tgcatcctcgttacatgcatggcgctgctactagcccagaggttaaagtatatgcttatg 1036
||||||||||||| |||||||| |||||||||||| | ||| | ||| ||||| ||||
Sbjct: 19 tgcatcctcgttatatgcatggtgctgctactagctccgagttagcagtgtatgcatatg 78
Query: 1037 cggctgcacaagttaagaaagctttggaggt 1067
| || || ||||| |||||||| ||||||||
Sbjct: 79 ctgcggctcaagtgaagaaagccttggaggt 109
>gb|BF518435.1|BF518435 EST455882 DSIL Medicago truncatula cDNA clone pDSIL-5E9, mRNA
sequence
Length = 547
Score = 61.9 bits (31), Expect = 2e-007
Identities = 106/131 (80%)
Strand = Plus / Plus
Query: 1087 gaaaactatgtgttctggggtggaagagagggttaccaaactcttctgaatactgatatg 1146
||||| |||||||| ||||| || |||||||||||||| ||||| |||| || ||||||
Sbjct: 140 gaaaattatgtgttttggggcggtcgagagggttaccaatctcttttgaacacagatatg 199
Query: 1147 aagagagaacttgaccatctggctaactttcttcaagctgctgttgactacaagaagaag 1206
| |||| ||| | ||| |||||| ||| || |||||||||||| |||| ||||||
Sbjct: 200 gaacgagagcttaatcatttggctagattttttgaagctgctgttgcacacaaaaagaag 259
Query: 1207 attggattcaa 1217
|| ||||||||
Sbjct: 260 atcggattcaa 270
>gb|BQ140650.1|BQ140650 NF038E10PH1F1083 Phoma-infected Medicago truncatula cDNA clone
NF038E10PH 5', mRNA sequence
Length = 488
Score = 58.0 bits (29), Expect = 3e-006
Identities = 137/173 (79%)
Strand = Plus / Plus
Query: 637 attctcggtaagaagatgaaggattggatgcgcttcagtgttgcgttctggcacacgttc 696
||||| || |||||||||||||||||| | | || |||||||| || ||||| || |||
Sbjct: 302 attcttgggaagaagatgaaggattggttcagatttagtgttgcattttggcatacattc 361
Query: 697 cgtggtactggcgctgatcctttcggtgctcctacaaagacttggccttgggaggacggc 756
||||| || || | ||| || || ||||| ||||| || |||||| ||||| || ||
Sbjct: 362 cgtggaacaggtgttgacccatttggtgcacctaccaaatattggccatgggaagatggt 421
Query: 757 acaaattctttggccatggctaagagaagaatgagagctcactttgagttcat 809
|| ||||| || ||||||||| |||||||||||||| | |||||||||||
Sbjct: 422 accaattcattaagcatggctaaaagaagaatgagagcaaattttgagttcat 474
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 479,894
Number of Sequences: 392609
Number of extensions: 479894
Number of successful extensions: 34493
Number of sequences better than 0.5: 17
Number of HSP's better than 0.5 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34426
Number of HSP's gapped (non-prelim): 54
length of query: 2204
length of database: 441,732,993
effective HSP length: 20
effective length of query: 2184
effective length of database: 433,880,813
effective search space: 947595695592
effective search space used: 947595695592
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)