BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 5705280.3.1
(980 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CG955485.1|CG955485 MBEGD61TR mth2 Medicago truncatula g... 40 0.34
emb|CR325130.1| mte1-52F15RM1 BAC end, cultivar Jemalong A1... 38 1.4
emb|CR326840.1| mte1-55O15FM1 BAC end, cultivar Jemalong A1... 38 1.4
emb|CR295694.1| mte1-12G15FM1 BAC end, cultivar Jemalong A1... 38 1.4
gb|AW696507.1|AW696507 NF107G11ST1F1087 Developing stem Med... 38 1.4
gb|AL374734.1|AL374734 MtBB08G06R1 MtBB Medicago truncatula... 38 1.4
gb|BE325143.2|BE325143 NF089H04ST1F1032 Developing stem Med... 38 1.4
gb|BI266454.1|BI266454 NF097F06IN1F1059 Insect herbivory Me... 38 1.4
gb|AC146759.29| Medicago truncatula clone mth2-173e19, comp... 38 1.4
gb|CG971751.1|CG971751 MBEDR64TRC mth2 Medicago truncatula ... 36 5.4
emb|CR499612.1| mth2-176D3RM1 BAC end, cultivar Jemalong A1... 36 5.4
gb|AJ388968.1|AJ388968 AJ388968 Medicago truncatula R108 Me... 36 5.4
gb|AW573678.1|AW573678 EST316269 GVN Medicago truncatula cD... 36 5.4
gb|AW574200.1|AW574200 EST316791 GVN Medicago truncatula cD... 36 5.4
gb|AW688674.1|AW688674 NF010C09ST1F1000 Developing stem Med... 36 5.4
gb|AW774358.1|AW774358 EST333509 KV3 Medicago truncatula cD... 36 5.4
gb|AW774359.1|AW774359 EST333510 KV3 Medicago truncatula cD... 36 5.4
gb|AW775283.1|AW775283 EST334348 DSIL Medicago truncatula c... 36 5.4
gb|AW127190.2|AW127190 M110130 GVN Medicago truncatula cDNA... 36 5.4
gb|AW127438.2|AW127438 M110625 DSIL Medicago truncatula cDN... 36 5.4
gb|BE202573.1|BE202573 EST392982 KV1 Medicago truncatula cD... 36 5.4
gb|BE203821.1|BE203821 EST396497 KV0 Medicago truncatula cD... 36 5.4
gb|BE204445.1|BE204445 EST397121 KV0 Medicago truncatula cD... 36 5.4
gb|AL365587.1|AL365587 MtBA01C11F2 MtBA Medicago truncatula... 36 5.4
gb|AL366368.1|AL366368 MtBA07C02F1 MtBA Medicago truncatula... 36 5.4
gb|AL368023.1|AL368023 MtBA21G03F1 MtBA Medicago truncatula... 36 5.4
gb|AL369629.1|AL369629 MtBA32C11F1 MtBA Medicago truncatula... 36 5.4
gb|AL372871.1|AL372871 MtBA54B09F1 MtBA Medicago truncatula... 36 5.4
gb|AL372872.1|AL372872 MtBA54B10F1 MtBA Medicago truncatula... 36 5.4
gb|AL373315.1|AL373315 MtBA57B01F1 MtBA Medicago truncatula... 36 5.4
gb|AL373623.1|AL373623 MtBB01H04F1 MtBB Medicago truncatula... 36 5.4
gb|AL385218.1|AL385218 MtBC27B05F1 MtBC Medicago truncatula... 36 5.4
gb|BF003576.1|BF003576 EST432074 KV1 Medicago truncatula cD... 36 5.4
gb|BF519542.1|BF519542 EST457006 DSIL Medicago truncatula c... 36 5.4
gb|BF519738.1|BF519738 EST457202 DSIL Medicago truncatula c... 36 5.4
gb|BF635066.1|BF635066 NF079B12DT1F1096 Drought Medicago tr... 36 5.4
gb|BF641960.1|BF641960 NF012D11IN1F1091 Insect herbivory Me... 36 5.4
gb|BF642529.1|BF642529 NF060B12IN1F1095 Insect herbivory Me... 36 5.4
gb|BF647040.1|BF647040 NF059H01EC1F1014 Elicited cell cultu... 36 5.4
gb|BF647280.1|BF647280 NF016A11EC1F1084 Elicited cell cultu... 36 5.4
gb|BF647938.1|BF647938 NF038E10EC1F1082 Elicited cell cultu... 36 5.4
gb|BF648351.1|BF648351 NF046F05EC1F1046 Elicited cell cultu... 36 5.4
gb|BF649119.1|BF649119 NF055E02EC1F1017 Elicited cell cultu... 36 5.4
gb|AW697407.2|AW697407 NF118E01ST1F1005 Developing stem Med... 36 5.4
gb|AW690863.2|AW690863 NF035H09ST1F1000 Developing stem Med... 36 5.4
gb|AW693351.2|AW693351 NF063D03ST1F1000 Developing stem Med... 36 5.4
gb|BE249014.2|BE249014 NF037A05DT1F1034 Drought Medicago tr... 36 5.4
gb|BE323584.2|BE323584 NF016C09PL1F1067 Phosphate starved l... 36 5.4
gb|BG448837.1|BG448837 NF002F05IN1F1047 Insect herbivory Me... 36 5.4
gb|BG580636.1|BG580636 EST482363 GVN Medicago truncatula cD... 36 5.4
gb|BG645795.1|BG645795 EST507414 KV3 Medicago truncatula cD... 36 5.4
gb|BG646411.1|BG646411 EST508030 HOGA Medicago truncatula c... 36 5.4
gb|BG646530.1|BG646530 EST508149 HOGA Medicago truncatula c... 36 5.4
gb|BG646728.1|BG646728 EST508347 HOGA Medicago truncatula c... 36 5.4
gb|BG648652.1|BG648652 EST510271 HOGA Medicago truncatula c... 36 5.4
gb|BI267132.1|BI267132 NF097C11IN1F1086 Insect herbivory Me... 36 5.4
gb|BI270978.1|BI270978 NF007H09FL1F1080 Developing flower M... 36 5.4
gb|BI308176.1|BI308176 EST529586 GPOD Medicago truncatula c... 36 5.4
gb|BM779882.1|BM779882 EST590458 KV2 Medicago truncatula cD... 36 5.4
gb|BQ123916.1|BQ123916 EST609492 GLSD Medicago truncatula c... 36 5.4
gb|BQ124278.1|BQ124278 EST609854 GLSD Medicago truncatula c... 36 5.4
gb|BQ138442.1|BQ138442 NF003C06PH1F1040 Phoma-infected Medi... 36 5.4
gb|BQ140836.1|BQ140836 NF043E08PH1F1067 Phoma-infected Medi... 36 5.4
gb|AJ501045.1|AJ501045 AJ501045 MTAMP Medicago truncatula c... 36 5.4
gb|CA918190.1|CA918190 EST642337 GPOD Medicago truncatula c... 36 5.4
gb|CB892372.1|CB892372 EST649341 KV3 Medicago truncatula cD... 36 5.4
gb|CB895138.1|CB895138 EST647930 HOGA Medicago truncatula c... 36 5.4
gb|CX525384.1|CX525384 s13dNF18E12AT099_479402 Aphid-Infect... 36 5.4
gb|CX526063.1|CX526063 s13dNF33H01AT016_509870 Aphid-Infect... 36 5.4
gb|CX527498.1|CX527498 s13dNF43C06AT050_515508 Aphid-Infect... 36 5.4
gb|CX531260.1|CX531260 s13dNF24D05MJ043_248637 Methyl Jasmo... 36 5.4
gb|CX534276.1|CX534276 s13dNF0JF01MJ011_322311 Methyl Jasmo... 36 5.4
gb|DW018045.1|DW018045 EST1227006 MTY Medicago truncatula c... 36 5.4
gb|AC127674.21| Medicago truncatula clone mth2-20a12, WORKI... 36 5.4
emb|CT033768.1| Medicago truncatula chromosome 5 clone mte1... 36 5.4
>gb|CG955485.1|CG955485 MBEGD61TR mth2 Medicago truncatula genomic clone 48L2, DNA sequence
Length = 876
Score = 40.1 bits (20), Expect = 0.34
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 519 caacacaaacgacacaaaac 538
||||||||||||||||||||
Sbjct: 218 caacacaaacgacacaaaac 237
>emb|CR325130.1| mte1-52F15RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 445
Score = 38.2 bits (19), Expect = 1.4
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 301 tgtgcttccttttgctcta 319
|||||||||||||||||||
Sbjct: 290 tgtgcttccttttgctcta 308
>emb|CR326840.1| mte1-55O15FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 723
Score = 38.2 bits (19), Expect = 1.4
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 521 acacaaacgacacaaaacctcaa 543
|||||||||||| ||||||||||
Sbjct: 304 acacaaacgacaaaaaacctcaa 326
>emb|CR295694.1| mte1-12G15FM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 876
Score = 38.2 bits (19), Expect = 1.4
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 521 acacaaacgacacaaaacctcaa 543
|||||||||||| ||||||||||
Sbjct: 300 acacaaacgacaaaaaacctcaa 322
>gb|AW696507.1|AW696507 NF107G11ST1F1087 Developing stem Medicago truncatula cDNA clone
NF107G11ST 5', mRNA sequence
Length = 659
Score = 38.2 bits (19), Expect = 1.4
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 301 tgtgcttccttttgctcta 319
|||||||||||||||||||
Sbjct: 457 tgtgcttccttttgctcta 439
>gb|AL374734.1|AL374734 MtBB08G06R1 MtBB Medicago truncatula cDNA clone MtBB08G06 T7, mRNA
sequence
Length = 417
Score = 38.2 bits (19), Expect = 1.4
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 77 tcggaaacagcatgcttgg 95
|||||||||||||||||||
Sbjct: 161 tcggaaacagcatgcttgg 143
>gb|BE325143.2|BE325143 NF089H04ST1F1032 Developing stem Medicago truncatula cDNA clone
NF089H04ST 5', mRNA sequence
Length = 463
Score = 38.2 bits (19), Expect = 1.4
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 301 tgtgcttccttttgctcta 319
|||||||||||||||||||
Sbjct: 291 tgtgcttccttttgctcta 273
>gb|BI266454.1|BI266454 NF097F06IN1F1059 Insect herbivory Medicago truncatula cDNA clone
NF097F06IN 5', mRNA sequence
Length = 586
Score = 38.2 bits (19), Expect = 1.4
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 301 tgtgcttccttttgctcta 319
|||||||||||||||||||
Sbjct: 404 tgtgcttccttttgctcta 386
>gb|AC146759.29| Medicago truncatula clone mth2-173e19, complete sequence
Length = 133602
Score = 38.2 bits (19), Expect = 1.4
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 518 acaacacaaacgacacaaa 536
|||||||||||||||||||
Sbjct: 101376 acaacacaaacgacacaaa 101358
>gb|CG971751.1|CG971751 MBEDR64TRC mth2 Medicago truncatula genomic clone 34K8, DNA
sequence
Length = 944
Score = 36.2 bits (18), Expect = 5.4
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 957 acttgcaaagacaaggca 974
||||||||||||||||||
Sbjct: 71 acttgcaaagacaaggca 88
>emb|CR499612.1| mth2-176D3RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 752
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 235 gaacaagttcacacctctggattgta 210
>gb|AJ388968.1|AJ388968 AJ388968 Medicago truncatula R108 Medicago truncatula cDNA clone
MtNo341, mRNA sequence
Length = 614
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 203 gaacaagttcacacctctggattgta 178
>gb|AW573678.1|AW573678 EST316269 GVN Medicago truncatula cDNA clone pGVN-47L6, mRNA
sequence
Length = 679
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 190 gaacaagttcacacctctggattgta 165
>gb|AW574200.1|AW574200 EST316791 GVN Medicago truncatula cDNA clone pGVN-51N1, mRNA
sequence
Length = 672
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 222 gaacaagttcacacctctggattgta 197
>gb|AW688674.1|AW688674 NF010C09ST1F1000 Developing stem Medicago truncatula cDNA clone
NF010C09ST 5', mRNA sequence
Length = 374
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 219 gaacaagttcacacctctggattgta 194
>gb|AW774358.1|AW774358 EST333509 KV3 Medicago truncatula cDNA clone pKV3-22G12, mRNA
sequence
Length = 663
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 174 gaacaagttcacacctctggattgta 149
>gb|AW774359.1|AW774359 EST333510 KV3 Medicago truncatula cDNA clone pKV3-22G14, mRNA
sequence
Length = 590
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 155 gaacaagttcacacctctggattgta 130
>gb|AW775283.1|AW775283 EST334348 DSIL Medicago truncatula cDNA clone pDSIL-1C13, mRNA
sequence
Length = 680
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 191 gaacaagttcacacctctggattgta 166
>gb|AW127190.2|AW127190 M110130 GVN Medicago truncatula cDNA clone N153, mRNA sequence
Length = 401
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 233 gaacaagttcacacctctggattgta 208
>gb|AW127438.2|AW127438 M110625 DSIL Medicago truncatula cDNA clone IL160, mRNA sequence
Length = 346
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 263 gaacaagttcacacctctggattgta 238
>gb|BE202573.1|BE202573 EST392982 KV1 Medicago truncatula cDNA clone pKV1-13M3, mRNA
sequence
Length = 617
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 225 gaacaagttcacacctctggattgta 200
>gb|BE203821.1|BE203821 EST396497 KV0 Medicago truncatula cDNA clone pKV0-11J21, mRNA
sequence
Length = 564
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 200 gaacaagttcacacctctggattgta 175
>gb|BE204445.1|BE204445 EST397121 KV0 Medicago truncatula cDNA clone pKV0-16C22, mRNA
sequence
Length = 497
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 211 gaacaagttcacacctctggattgta 186
>gb|AL365587.1|AL365587 MtBA01C11F2 MtBA Medicago truncatula cDNA clone MtBA01C11 T3, mRNA
sequence
Length = 469
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 207 gaacaagttcacacctctggattgta 182
>gb|AL366368.1|AL366368 MtBA07C02F1 MtBA Medicago truncatula cDNA clone MtBA07C02 T3, mRNA
sequence
Length = 469
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 217 gaacaagttcacacctctggattgta 192
>gb|AL368023.1|AL368023 MtBA21G03F1 MtBA Medicago truncatula cDNA clone MtBA21G03 T3, mRNA
sequence
Length = 509
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 220 gaacaagttcacacctctggattgta 195
>gb|AL369629.1|AL369629 MtBA32C11F1 MtBA Medicago truncatula cDNA clone MtBA32C11 T3, mRNA
sequence
Length = 467
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 217 gaacaagttcacacctctggattgta 192
>gb|AL372871.1|AL372871 MtBA54B09F1 MtBA Medicago truncatula cDNA clone MtBA54B09 T3, mRNA
sequence
Length = 421
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 202 gaacaagttcacacctctggattgta 177
>gb|AL372872.1|AL372872 MtBA54B10F1 MtBA Medicago truncatula cDNA clone MtBA54B10 T3, mRNA
sequence
Length = 233
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 186 gaacaagttcacacctctggattgta 161
>gb|AL373315.1|AL373315 MtBA57B01F1 MtBA Medicago truncatula cDNA clone MtBA57B01 T3, mRNA
sequence
Length = 451
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 180 gaacaagttcacacctctggattgta 155
>gb|AL373623.1|AL373623 MtBB01H04F1 MtBB Medicago truncatula cDNA clone MtBB01H04 T3, mRNA
sequence
Length = 469
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 217 gaacaagttcacacctctggattgta 192
>gb|AL385218.1|AL385218 MtBC27B05F1 MtBC Medicago truncatula cDNA clone MtBC27B05 T3, mRNA
sequence
Length = 453
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 191 gaacaagttcacacctctggattgta 166
>gb|BF003576.1|BF003576 EST432074 KV1 Medicago truncatula cDNA clone pKV1-7H2, mRNA
sequence
Length = 586
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 218 gaacaagttcacacctctggattgta 193
>gb|BF519542.1|BF519542 EST457006 DSIL Medicago truncatula cDNA clone pDSIL-21C13, mRNA
sequence
Length = 399
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 146 gaacaagttcacacctctggattgta 121
>gb|BF519738.1|BF519738 EST457202 DSIL Medicago truncatula cDNA clone pDSIL-21F21, mRNA
sequence
Length = 610
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 219 gaacaagttcacacctctggattgta 194
>gb|BF635066.1|BF635066 NF079B12DT1F1096 Drought Medicago truncatula cDNA clone NF079B12DT
5', mRNA sequence
Length = 690
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 224 gaacaagttcacacctctggattgta 199
>gb|BF641960.1|BF641960 NF012D11IN1F1091 Insect herbivory Medicago truncatula cDNA clone
NF012D11IN 5', mRNA sequence
Length = 566
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 64 gaacaagttcacacctctggattgta 39
>gb|BF642529.1|BF642529 NF060B12IN1F1095 Insect herbivory Medicago truncatula cDNA clone
NF060B12IN 5', mRNA sequence
Length = 673
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 207 gaacaagttcacacctctggattgta 182
>gb|BF647040.1|BF647040 NF059H01EC1F1014 Elicited cell culture Medicago truncatula cDNA
clone NF059H01EC 5', mRNA sequence
Length = 325
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 226 gaacaagttcacacctctggattgta 201
>gb|BF647280.1|BF647280 NF016A11EC1F1084 Elicited cell culture Medicago truncatula cDNA
clone NF016A11EC 5', mRNA sequence
Length = 462
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 216 gaacaagttcacacctctggattgta 191
>gb|BF647938.1|BF647938 NF038E10EC1F1082 Elicited cell culture Medicago truncatula cDNA
clone NF038E10EC 5', mRNA sequence
Length = 546
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 309 gaacaagttcacacctctggattgta 284
>gb|BF648351.1|BF648351 NF046F05EC1F1046 Elicited cell culture Medicago truncatula cDNA
clone NF046F05EC 5', mRNA sequence
Length = 453
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 216 gaacaagttcacacctctggattgta 191
>gb|BF649119.1|BF649119 NF055E02EC1F1017 Elicited cell culture Medicago truncatula cDNA
clone NF055E02EC 5', mRNA sequence
Length = 422
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 209 gaacaagttcacacctctggattgta 184
>gb|AW697407.2|AW697407 NF118E01ST1F1005 Developing stem Medicago truncatula cDNA clone
NF118E01ST 5', mRNA sequence
Length = 341
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 62 gaacaagttcacacctctggattgta 37
>gb|AW690863.2|AW690863 NF035H09ST1F1000 Developing stem Medicago truncatula cDNA clone
NF035H09ST 5', mRNA sequence
Length = 493
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 246 gaacaagttcacacctctggattgta 221
>gb|AW693351.2|AW693351 NF063D03ST1F1000 Developing stem Medicago truncatula cDNA clone
NF063D03ST 5', mRNA sequence
Length = 376
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 216 gaacaagttcacacctctggattgta 191
>gb|BE249014.2|BE249014 NF037A05DT1F1034 Drought Medicago truncatula cDNA clone NF037A05DT
5', mRNA sequence
Length = 374
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 213 gaacaagttcacacctctggattgta 188
>gb|BE323584.2|BE323584 NF016C09PL1F1067 Phosphate starved leaf Medicago truncatula cDNA
clone NF016C09PL 5', mRNA sequence
Length = 281
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 219 gaacaagttcacacctctggattgta 194
>gb|BG448837.1|BG448837 NF002F05IN1F1047 Insect herbivory Medicago truncatula cDNA clone
NF002F05IN 5', mRNA sequence
Length = 381
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 219 gaacaagttcacacctctggattgta 194
>gb|BG580636.1|BG580636 EST482363 GVN Medicago truncatula cDNA clone pGVN-61I21 5' end,
mRNA sequence
Length = 614
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 218 gaacaagttcacacctctggattgta 193
>gb|BG645795.1|BG645795 EST507414 KV3 Medicago truncatula cDNA clone pKV3-47J9 5' end, mRNA
sequence
Length = 698
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 209 gaacaagttcacacctctggattgta 184
>gb|BG646411.1|BG646411 EST508030 HOGA Medicago truncatula cDNA clone pHOGA-7B10 5' end,
mRNA sequence
Length = 590
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 126 gaacaagttcacacctctggattgta 101
>gb|BG646530.1|BG646530 EST508149 HOGA Medicago truncatula cDNA clone pHOGA-9G3 5' end,
mRNA sequence
Length = 356
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 72 gaacaagttcacacctctggattgta 47
>gb|BG646728.1|BG646728 EST508347 HOGA Medicago truncatula cDNA clone pHOGA-9L11 5' end,
mRNA sequence
Length = 652
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 160 gaacaagttcacacctctggattgta 135
>gb|BG648652.1|BG648652 EST510271 HOGA Medicago truncatula cDNA clone pHOGA-23K20 5' end,
mRNA sequence
Length = 624
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 188 gaacaagttcacacctctggattgta 163
>gb|BI267132.1|BI267132 NF097C11IN1F1086 Insect herbivory Medicago truncatula cDNA clone
NF097C11IN 5', mRNA sequence
Length = 429
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 218 gaacaagttcacacctctggattgta 193
>gb|BI270978.1|BI270978 NF007H09FL1F1080 Developing flower Medicago truncatula cDNA clone
NF007H09FL 5', mRNA sequence
Length = 441
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 225 gaacaagttcacacctctggattgta 200
>gb|BI308176.1|BI308176 EST529586 GPOD Medicago truncatula cDNA clone pGPOD-2I4 5' end,
mRNA sequence
Length = 723
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 40 gaacaagttcacacctctggattgta 15
>gb|BM779882.1|BM779882 EST590458 KV2 Medicago truncatula cDNA clone pKV2-53G8, mRNA
sequence
Length = 717
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 202 gaacaagttcacacctctggattgta 177
>gb|BQ123916.1|BQ123916 EST609492 GLSD Medicago truncatula cDNA clone pGLSD-33F2, mRNA
sequence
Length = 527
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 166 gaacaagttcacacctctggattgta 141
>gb|BQ124278.1|BQ124278 EST609854 GLSD Medicago truncatula cDNA clone pGLSD-34H20, mRNA
sequence
Length = 627
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 191 gaacaagttcacacctctggattgta 166
>gb|BQ138442.1|BQ138442 NF003C06PH1F1040 Phoma-infected Medicago truncatula cDNA clone
NF003C06PH 5', mRNA sequence
Length = 541
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 210 gaacaagttcacacctctggattgta 185
>gb|BQ140836.1|BQ140836 NF043E08PH1F1067 Phoma-infected Medicago truncatula cDNA clone
NF043E08PH 5', mRNA sequence
Length = 427
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 226 gaacaagttcacacctctggattgta 201
>gb|AJ501045.1|AJ501045 AJ501045 MTAMP Medicago truncatula cDNA clone mtgmadc120002b01,
mRNA sequence
Length = 652
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 249 gaacaagttcacacctctggattgta 224
>gb|CA918190.1|CA918190 EST642337 GPOD Medicago truncatula cDNA clone GPOD-38D21, mRNA
sequence
Length = 753
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 189 gaacaagttcacacctctggattgta 164
>gb|CB892372.1|CB892372 EST649341 KV3 Medicago truncatula cDNA clone KV3-54E13, mRNA
sequence
Length = 688
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 186 gaacaagttcacacctctggattgta 161
>gb|CB895138.1|CB895138 EST647930 HOGA Medicago truncatula cDNA clone HOGA-33P13, mRNA
sequence
Length = 530
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 113 gaacaagttcacacctctggattgta 88
>gb|CX525384.1|CX525384 s13dNF18E12AT099_479402 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 531
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 221 gaacaagttcacacctctggattgta 196
>gb|CX526063.1|CX526063 s13dNF33H01AT016_509870 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 605
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 192 gaacaagttcacacctctggattgta 167
>gb|CX527498.1|CX527498 s13dNF43C06AT050_515508 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 628
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 215 gaacaagttcacacctctggattgta 190
>gb|CX531260.1|CX531260 s13dNF24D05MJ043_248637 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 606
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 214 gaacaagttcacacctctggattgta 189
>gb|CX534276.1|CX534276 s13dNF0JF01MJ011_322311 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 629
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 213 gaacaagttcacacctctggattgta 188
>gb|DW018045.1|DW018045 EST1227006 MTY Medicago truncatula cDNA clone MTYB157, mRNA
sequence
Length = 712
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 246 gaacaagttcacacctctggattgta 221
>gb|AC127674.21| Medicago truncatula clone mth2-20a12, WORKING DRAFT SEQUENCE, 6
unordered pieces
Length = 126913
Score = 36.2 bits (18), Expect = 5.4
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 516 gaacaacacaaacgacac 533
||||||||||||||||||
Sbjct: 2343 gaacaacacaaacgacac 2326
>emb|CT033768.1| Medicago truncatula chromosome 5 clone mte1-72b19, WORKING DRAFT
SEQUENCE
Length = 121254
Score = 36.2 bits (18), Expect = 5.4
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 228 gaacaagttcacagctctgggttgta 253
||||||||||||| |||||| |||||
Sbjct: 72311 gaacaagttcacacctctggattgta 72286
Database: Mt_nucl_with_EST.fasta
Posted date: May 2, 2006 2:46 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 193,100
Number of Sequences: 392609
Number of extensions: 193100
Number of successful extensions: 14125
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 14036
Number of HSP's gapped (non-prelim): 89
length of query: 980
length of database: 441,732,993
effective HSP length: 20
effective length of query: 960
effective length of database: 433,880,813
effective search space: 416525580480
effective search space used: 416525580480
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)