BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3829259.2.1
(1019 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE942663.1|BE942663 EST422242 MGHG Medicago truncatula c... 60 4e-007
gb|BE942668.1|BE942668 EST422247 MGHG Medicago truncatula c... 60 4e-007
gb|BE942669.1|BE942669 EST422248 MGHG Medicago truncatula c... 60 4e-007
gb|BG451975.1|BG451975 NF043G10DT1F1081 Drought Medicago tr... 60 4e-007
gb|CA990695.1|CA990695 EST644203 GESD Medicago truncatula c... 60 4e-007
gb|CB894215.1|CB894215 EST647007 HOGA Medicago truncatula c... 60 4e-007
gb|BG644551.1|BG644551 EST506170 KV3 Medicago truncatula cD... 52 9e-005
gb|AC142526.5| Medicago truncatula clone mth2-34h20, comple... 50 4e-004
gb|AL369795.1|AL369795 MtBA33E01R1 MtBA Medicago truncatula... 44 0.023
gb|AW695008.2|AW695008 NF082D09ST1F1077 Developing stem Med... 44 0.023
gb|BG588912.1|BG588912 EST490721 MHRP- Medicago truncatula ... 44 0.023
gb|BI268967.1|BI268967 NF002C05IR1F1037 Irradiated Medicago... 44 0.023
gb|BQ147135.1|BQ147135 NF034A07FL1F1052 Developing flower M... 44 0.023
gb|BQ147412.1|BQ147412 NF040C12FL1F1097 Developing flower M... 44 0.023
gb|BQ148664.1|BQ148664 NF080C11FL1F1086 Developing flower M... 44 0.023
gb|BQ153640.1|BQ153640 NF040G08IR1F1067 Irradiated Medicago... 44 0.023
gb|BQ164834.1|BQ164834 EST610703 KVKC Medicago truncatula c... 44 0.023
gb|CB894140.1|CB894140 EST646932 HOGA Medicago truncatula c... 44 0.023
gb|CG975624.1|CG975624 MBEGW24TR mth2 Medicago truncatula g... 42 0.091
gb|AW690371.1|AW690371 NF032G03ST1F1000 Developing stem Med... 42 0.091
gb|AW774538.1|AW774538 EST333689 KV3 Medicago truncatula cD... 42 0.091
gb|AW775957.1|AW775957 EST335022 DSIL Medicago truncatula c... 42 0.091
gb|AW776383.1|AW776383 EST335448 DSIL Medicago truncatula c... 42 0.091
gb|BF635019.1|BF635019 NF078G09DT1F1071 Drought Medicago tr... 42 0.091
gb|BF639756.1|BF639756 NF018B01IN1F1010 Insect herbivory Me... 42 0.091
gb|BF644263.1|BF644263 NF061G08EC1F1067 Elicited cell cultu... 42 0.091
gb|BG455279.1|BG455279 NF046E05PL1F1037 Phosphate starved l... 42 0.091
gb|BG644768.1|BG644768 EST506387 KV3 Medicago truncatula cD... 42 0.091
gb|BG647665.1|BG647665 EST509284 HOGA Medicago truncatula c... 42 0.091
gb|BI270061.1|BI270061 NF004F06FL1F1059 Developing flower M... 42 0.091
gb|BI270893.1|BI270893 NF005D06FL1F1058 Developing flower M... 42 0.091
gb|BI271421.1|BI271421 NF051D11FL1F1094 Developing flower M... 42 0.091
gb|BQ147578.1|BQ147578 NF044D05FL1F1045 Developing flower M... 42 0.091
gb|CB892692.1|CB892692 EST645484 HOGA Medicago truncatula c... 42 0.091
gb|CB893909.1|CB893909 EST646701 HOGA Medicago truncatula c... 42 0.091
gb|CB894137.1|CB894137 EST646929 HOGA Medicago truncatula c... 42 0.091
gb|CX529201.1|CX529201 s13dNF06C03MJ018_244460 Methyl Jasmo... 42 0.091
gb|CX529558.1|CX529558 s13dNF97F10MJ079_245167 Methyl Jasmo... 42 0.091
gb|CX534889.1|CX534889 s13dNF0MC11MJ086_336181 Methyl Jasmo... 42 0.091
gb|CX542541.1|CX542541 s13dNF57F05GS047_474300 Germinating ... 42 0.091
gb|CG959525.1|CG959525 MBELU93TF mth2 Medicago truncatula g... 40 0.36
gb|BQ123438.1|BQ123438 EST609014 GLSD Medicago truncatula c... 40 0.36
emb|CR936368.12| M.truncatula DNA sequence from clone MTH2-... 40 0.36
>gb|BE942663.1|BE942663 EST422242 MGHG Medicago truncatula cDNA clone pMGHG-9G13, mRNA
sequence
Length = 551
Score = 60.0 bits (30), Expect = 4e-007
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 626 attttctttccagaagccttctcaaatgcattgactatctccaacactgatgttcctttt 685
|||||||||||||| ||||||||||| || | || |||||||| ||||||||||| |||
Sbjct: 412 attttctttccagatgccttctcaaaagctctaaccatctccaaaactgatgttcccttt 353
Query: 686 cc 687
||
Sbjct: 352 cc 351
>gb|BE942668.1|BE942668 EST422247 MGHG Medicago truncatula cDNA clone pMGHG-9G23, mRNA
sequence
Length = 630
Score = 60.0 bits (30), Expect = 4e-007
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 626 attttctttccagaagccttctcaaatgcattgactatctccaacactgatgttcctttt 685
|||||||||||||| ||||||||||| || | || |||||||| ||||||||||| |||
Sbjct: 415 attttctttccagatgccttctcaaaagctctaaccatctccaaaactgatgttcccttt 356
Query: 686 cc 687
||
Sbjct: 355 cc 354
>gb|BE942669.1|BE942669 EST422248 MGHG Medicago truncatula cDNA clone pMGHG-9I1, mRNA
sequence
Length = 614
Score = 60.0 bits (30), Expect = 4e-007
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 626 attttctttccagaagccttctcaaatgcattgactatctccaacactgatgttcctttt 685
|||||||||||||| ||||||||||| || | || |||||||| ||||||||||| |||
Sbjct: 399 attttctttccagatgccttctcaaaagctctaaccatctccaaaactgatgttcccttt 340
Query: 686 cc 687
||
Sbjct: 339 cc 338
>gb|BG451975.1|BG451975 NF043G10DT1F1081 Drought Medicago truncatula cDNA clone NF043G10DT
5', mRNA sequence
Length = 635
Score = 60.0 bits (30), Expect = 4e-007
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 626 attttctttccagaagccttctcaaatgcattgactatctccaacactgatgttcctttt 685
|||||||||||||| ||||||||||| || | || |||||||| ||||||||||| |||
Sbjct: 440 attttctttccagatgccttctcaaaagctctaaccatctccaaaactgatgttcccttt 381
Query: 686 cc 687
||
Sbjct: 380 cc 379
>gb|CA990695.1|CA990695 EST644203 GESD Medicago truncatula cDNA clone GESD-29H3, mRNA
sequence
Length = 697
Score = 60.0 bits (30), Expect = 4e-007
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 626 attttctttccagaagccttctcaaatgcattgactatctccaacactgatgttcctttt 685
|||||||||||||| ||||||||||| || | || |||||||| ||||||||||| |||
Sbjct: 511 attttctttccagatgccttctcaaaagctctaaccatctccaaaactgatgttcccttt 570
Query: 686 cc 687
||
Sbjct: 571 cc 572
>gb|CB894215.1|CB894215 EST647007 HOGA Medicago truncatula cDNA clone HOGA-30O14, mRNA
sequence
Length = 788
Score = 60.0 bits (30), Expect = 4e-007
Identities = 54/62 (87%)
Strand = Plus / Minus
Query: 626 attttctttccagaagccttctcaaatgcattgactatctccaacactgatgttcctttt 685
|||||||||||||| ||||||||||| || | || |||||||| ||||||||||| |||
Sbjct: 480 attttctttccagatgccttctcaaaagctctaaccatctccaaaactgatgttcccttt 421
Query: 686 cc 687
||
Sbjct: 420 cc 419
>gb|BG644551.1|BG644551 EST506170 KV3 Medicago truncatula cDNA clone pKV3-37J19 5' end,
mRNA sequence
Length = 738
Score = 52.0 bits (26), Expect = 9e-005
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 855 ctgccaactgcaatttgctgaacgaagggcataaggttgttaggagttcc 904
||||||||||||| ||||||||| || ||||| |||||||| ||| ||||
Sbjct: 377 ctgccaactgcaacttgctgaacaaaaggcatgaggttgttgggaattcc 328
Score = 40.1 bits (20), Expect = 0.36
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 626 attttctttccagaagccttctcaaatgcattgactatctccaacactgatgttcctttt 685
|||||||||||||| |||| ||||| || || |||||||| ||||||||||| |||
Sbjct: 599 attttctttccagaggcctgttcaaaagctgcaaccatctccaaaactgatgttcccttt 540
Query: 686 ccggttcc 693
|| |||||
Sbjct: 539 cctgttcc 532
>gb|AC142526.5| Medicago truncatula clone mth2-34h20, complete sequence
Length = 113622
Score = 50.1 bits (25), Expect = 4e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 631 ctttccagaagccttctcaaatgcattgactatctccaacactgatgttccttttcc 687
||||||||| ||||||||||| || | || |||||||| ||||||||||| |||||
Sbjct: 39563 ctttccagatgccttctcaaaagctctaaccatctccaaaactgatgttccctttcc 39619
>gb|AL369795.1|AL369795 MtBA33E01R1 MtBA Medicago truncatula cDNA clone MtBA33E01 T7, mRNA
sequence
Length = 541
Score = 44.1 bits (22), Expect = 0.023
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 626 attttctttccagaagccttctcaaatgca 655
|||||||| |||||||| ||||||||||||
Sbjct: 37 attttcttgccagaagctttctcaaatgca 8
>gb|AW695008.2|AW695008 NF082D09ST1F1077 Developing stem Medicago truncatula cDNA clone
NF082D09ST 5', mRNA sequence
Length = 584
Score = 44.1 bits (22), Expect = 0.023
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 626 attttctttccagaagccttctcaaatgca 655
|||||||| |||||||| ||||||||||||
Sbjct: 449 attttcttgccagaagctttctcaaatgca 478
>gb|BG588912.1|BG588912 EST490721 MHRP- Medicago truncatula cDNA clone pMHRP-57N2, mRNA
sequence
Length = 679
Score = 44.1 bits (22), Expect = 0.023
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 626 attttctttccagaagccttctcaaatgca 655
|||||||| |||||||| ||||||||||||
Sbjct: 219 attttcttgccagaagctttctcaaatgca 190
>gb|BI268967.1|BI268967 NF002C05IR1F1037 Irradiated Medicago truncatula cDNA clone
NF002C05IR 5', mRNA sequence
Length = 326
Score = 44.1 bits (22), Expect = 0.023
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 626 attttctttccagaagccttctcaaatgca 655
|||||||| |||||||| ||||||||||||
Sbjct: 227 attttcttgccagaagctttctcaaatgca 198
>gb|BQ147135.1|BQ147135 NF034A07FL1F1052 Developing flower Medicago truncatula cDNA clone
NF034A07FL 5', mRNA sequence
Length = 567
Score = 44.1 bits (22), Expect = 0.023
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 626 attttctttccagaagccttctcaaatgca 655
|||||||| |||||||| ||||||||||||
Sbjct: 163 attttcttgccagaagctttctcaaatgca 134
>gb|BQ147412.1|BQ147412 NF040C12FL1F1097 Developing flower Medicago truncatula cDNA clone
NF040C12FL 5', mRNA sequence
Length = 586
Score = 44.1 bits (22), Expect = 0.023
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 626 attttctttccagaagccttctcaaatgca 655
|||||||| |||||||| ||||||||||||
Sbjct: 123 attttcttgccagaagctttctcaaatgca 94
>gb|BQ148664.1|BQ148664 NF080C11FL1F1086 Developing flower Medicago truncatula cDNA clone
NF080C11FL 5', mRNA sequence
Length = 635
Score = 44.1 bits (22), Expect = 0.023
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 626 attttctttccagaagccttctcaaatgca 655
|||||||| |||||||| ||||||||||||
Sbjct: 246 attttcttgccagaagctttctcaaatgca 217
>gb|BQ153640.1|BQ153640 NF040G08IR1F1067 Irradiated Medicago truncatula cDNA clone
NF040G08IR 5', mRNA sequence
Length = 803
Score = 44.1 bits (22), Expect = 0.023
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 626 attttctttccagaagccttctcaaatgca 655
|||||||| |||||||| ||||||||||||
Sbjct: 162 attttcttgccagaagctttctcaaatgca 133
>gb|BQ164834.1|BQ164834 EST610703 KVKC Medicago truncatula cDNA clone pKVKC-2A5, mRNA
sequence
Length = 175
Score = 44.1 bits (22), Expect = 0.023
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 626 attttctttccagaagccttctcaaa 651
|||||||||||||| |||||||||||
Sbjct: 140 attttctttccagatgccttctcaaa 165
>gb|CB894140.1|CB894140 EST646932 HOGA Medicago truncatula cDNA clone HOGA-30O9, mRNA
sequence
Length = 413
Score = 44.1 bits (22), Expect = 0.023
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 626 attttctttccagaagccttctcaaatgca 655
|||||||| |||||||| ||||||||||||
Sbjct: 400 attttcttgccagaagctttctcaaatgca 371
>gb|CG975624.1|CG975624 MBEGW24TR mth2 Medicago truncatula genomic clone 53D23, DNA
sequence
Length = 762
Score = 42.1 bits (21), Expect = 0.091
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 942 ccaactggattaaagtacctaagcaaaatgatattccattc 982
||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 559 ccaactggattgaagtatctcagtaaaatgatcttccattc 599
>gb|AW690371.1|AW690371 NF032G03ST1F1000 Developing stem Medicago truncatula cDNA clone
NF032G03ST 5', mRNA sequence
Length = 614
Score = 42.1 bits (21), Expect = 0.091
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 942 ccaactggattaaagtacctaagcaaaatgatattccattc 982
||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 416 ccaactggattgaagtatctcagtaaaatgatcttccattc 376
>gb|AW774538.1|AW774538 EST333689 KV3 Medicago truncatula cDNA clone pKV3-22L16, mRNA
sequence
Length = 651
Score = 42.1 bits (21), Expect = 0.091
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 942 ccaactggattaaagtacctaagcaaaatgatattccattc 982
||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 568 ccaactggattgaagtatctcagtaaaatgatcttccattc 528
>gb|AW775957.1|AW775957 EST335022 DSIL Medicago truncatula cDNA clone pDSIL-3J7, mRNA
sequence
Length = 690
Score = 42.1 bits (21), Expect = 0.091
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 942 ccaactggattaaagtacctaagcaaaatgatattccattc 982
||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 413 ccaactggattgaagtatctcagtaaaatgatcttccattc 373
>gb|AW776383.1|AW776383 EST335448 DSIL Medicago truncatula cDNA clone pDSIL-7B12, mRNA
sequence
Length = 583
Score = 42.1 bits (21), Expect = 0.091
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 942 ccaactggattaaagtacctaagcaaaatgatattccattc 982
||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 332 ccaactggattgaagtatctcagtaaaatgatcttccattc 292
>gb|BF635019.1|BF635019 NF078G09DT1F1071 Drought Medicago truncatula cDNA clone NF078G09DT
5', mRNA sequence
Length = 694
Score = 42.1 bits (21), Expect = 0.091
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 942 ccaactggattaaagtacctaagcaaaatgatattccattc 982
||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 460 ccaactggattgaagtatctcagtaaaatgatcttccattc 420
>gb|BF639756.1|BF639756 NF018B01IN1F1010 Insect herbivory Medicago truncatula cDNA clone
NF018B01IN 5', mRNA sequence
Length = 282
Score = 42.1 bits (21), Expect = 0.091
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 942 ccaactggattaaagtacctaagcaaaatgatattccattc 982
||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 260 ccaactggattgaagtatctcagtaaaatgatcttccattc 220
>gb|BF644263.1|BF644263 NF061G08EC1F1067 Elicited cell culture Medicago truncatula cDNA
clone NF061G08EC 5', mRNA sequence
Length = 620
Score = 42.1 bits (21), Expect = 0.091
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 942 ccaactggattaaagtacctaagcaaaatgatattccattc 982
||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 488 ccaactggattgaagtatctcagtaaaatgatcttccattc 448
>gb|BG455279.1|BG455279 NF046E05PL1F1037 Phosphate starved leaf Medicago truncatula cDNA
clone NF046E05PL 5', mRNA sequence
Length = 685
Score = 42.1 bits (21), Expect = 0.091
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 942 ccaactggattaaagtacctaagcaaaatgatattccattc 982
||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 423 ccaactggattgaagtatctcagtaaaatgatcttccattc 383
>gb|BG644768.1|BG644768 EST506387 KV3 Medicago truncatula cDNA clone pKV3-38C18 5' end,
mRNA sequence
Length = 718
Score = 42.1 bits (21), Expect = 0.091
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 942 ccaactggattaaagtacctaagcaaaatgatattccattc 982
||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 545 ccaactggattgaagtatctcagtaaaatgatcttccattc 505
>gb|BG647665.1|BG647665 EST509284 HOGA Medicago truncatula cDNA clone pHOGA-17F13 5' end,
mRNA sequence
Length = 718
Score = 42.1 bits (21), Expect = 0.091
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 942 ccaactggattaaagtacctaagcaaaatgatattccattc 982
||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 569 ccaactggattgaagtatctcagtaaaatgatcttccattc 529
>gb|BI270061.1|BI270061 NF004F06FL1F1059 Developing flower Medicago truncatula cDNA clone
NF004F06FL 5', mRNA sequence
Length = 626
Score = 42.1 bits (21), Expect = 0.091
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 942 ccaactggattaaagtacctaagcaaaatgatattccattc 982
||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 314 ccaactggattgaagtatctcagtaaaatgatcttccattc 274
>gb|BI270893.1|BI270893 NF005D06FL1F1058 Developing flower Medicago truncatula cDNA clone
NF005D06FL 5', mRNA sequence
Length = 566
Score = 42.1 bits (21), Expect = 0.091
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 942 ccaactggattaaagtacctaagcaaaatgatattccattc 982
||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 308 ccaactggattgaagtatctcagtaaaatgatcttccattc 268
>gb|BI271421.1|BI271421 NF051D11FL1F1094 Developing flower Medicago truncatula cDNA clone
NF051D11FL 5', mRNA sequence
Length = 648
Score = 42.1 bits (21), Expect = 0.091
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 942 ccaactggattaaagtacctaagcaaaatgatattccattc 982
||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 459 ccaactggattgaagtatctcagtaaaatgatcttccattc 419
>gb|BQ147578.1|BQ147578 NF044D05FL1F1045 Developing flower Medicago truncatula cDNA clone
NF044D05FL 5', mRNA sequence
Length = 489
Score = 42.1 bits (21), Expect = 0.091
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 942 ccaactggattaaagtacctaagcaaaatgatattccattc 982
||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 479 ccaactggattgaagtatctcagtaaaatgatcttccattc 439
>gb|CB892692.1|CB892692 EST645484 HOGA Medicago truncatula cDNA clone HOGA-19B13, mRNA
sequence
Length = 798
Score = 42.1 bits (21), Expect = 0.091
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 942 ccaactggattaaagtacctaagcaaaatgatattccattc 982
||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 623 ccaactggattgaagtatctcagtaaaatgatcttccattc 583
>gb|CB893909.1|CB893909 EST646701 HOGA Medicago truncatula cDNA clone HOGA-29M8, mRNA
sequence
Length = 384
Score = 42.1 bits (21), Expect = 0.091
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 942 ccaactggattaaagtacctaagcaaaatgatattccattc 982
||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 178 ccaactggattgaagtatctcagtaaaatgatcttccattc 138
>gb|CB894137.1|CB894137 EST646929 HOGA Medicago truncatula cDNA clone HOGA-30O3, mRNA
sequence
Length = 579
Score = 42.1 bits (21), Expect = 0.091
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 942 ccaactggattaaagtacctaagcaaaatgatattccattc 982
||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 319 ccaactggattgaagtatctcagtaaaatgatcttccattc 279
>gb|CX529201.1|CX529201 s13dNF06C03MJ018_244460 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 645
Score = 42.1 bits (21), Expect = 0.091
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 942 ccaactggattaaagtacctaagcaaaatgatattccattc 982
||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 392 ccaactggattgaagtatctcagtaaaatgatcttccattc 352
>gb|CX529558.1|CX529558 s13dNF97F10MJ079_245167 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 606
Score = 42.1 bits (21), Expect = 0.091
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 942 ccaactggattaaagtacctaagcaaaatgatattccattc 982
||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 437 ccaactggattgaagtatctcagtaaaatgatcttccattc 397
>gb|CX534889.1|CX534889 s13dNF0MC11MJ086_336181 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 550
Score = 42.1 bits (21), Expect = 0.091
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 942 ccaactggattaaagtacctaagcaaaatgatattccattc 982
||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 492 ccaactggattgaagtatctcagtaaaatgatcttccattc 452
>gb|CX542541.1|CX542541 s13dNF57F05GS047_474300 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 507
Score = 42.1 bits (21), Expect = 0.091
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 942 ccaactggattaaagtacctaagcaaaatgatattccattc 982
||||||||||| ||||| || || |||||||| ||||||||
Sbjct: 312 ccaactggattgaagtatctcagtaaaatgatcttccattc 272
>gb|CG959525.1|CG959525 MBELU93TF mth2 Medicago truncatula genomic clone 83O17, DNA
sequence
Length = 862
Score = 40.1 bits (20), Expect = 0.36
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 662 atctccaacactgatgttccttttccggttcc 693
|||||||| ||||||||||| ||||| |||||
Sbjct: 344 atctccaaaactgatgttccctttcctgttcc 313
>gb|BQ123438.1|BQ123438 EST609014 GLSD Medicago truncatula cDNA clone pGLSD-32A16, mRNA
sequence
Length = 112
Score = 40.1 bits (20), Expect = 0.36
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 662 atctccaacactgatgttccttttccggttcc 693
|||||||| ||||||||||| ||||| |||||
Sbjct: 107 atctccaaaactgatgttccctttcctgttcc 76
>emb|CR936368.12| M.truncatula DNA sequence from clone MTH2-4O11 on chromosome 3,
complete sequence
Length = 140262
Score = 40.1 bits (20), Expect = 0.36
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 55 atttcaaaagaaatactaataata 78
|||||||||||||| |||||||||
Sbjct: 3097 atttcaaaagaaatgctaataata 3120
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 312,074
Number of Sequences: 392609
Number of extensions: 312074
Number of successful extensions: 24581
Number of sequences better than 0.5: 43
Number of HSP's better than 0.5 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 24506
Number of HSP's gapped (non-prelim): 75
length of query: 1019
length of database: 441,732,993
effective HSP length: 20
effective length of query: 999
effective length of database: 433,880,813
effective search space: 433446932187
effective search space used: 433446932187
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)