BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3204398.2.1
(666 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX542314.1|CX542314 s13dNF82D03GS026_467944 Germinating ... 58 1e-006
gb|BE124894.1|BE124894 EST393929 GVN Medicago truncatula cD... 56 4e-006
gb|BE240576.1|BE240576 EST404625 MHRP- Medicago truncatula ... 56 4e-006
gb|BG644962.1|BG644962 EST506581 KV3 Medicago truncatula cD... 56 4e-006
gb|BQ165199.1|BQ165199 EST611068 KVKC Medicago truncatula c... 56 4e-006
gb|BQ165337.1|BQ165337 EST611206 KVKC Medicago truncatula c... 56 4e-006
gb|CB891505.1|CB891505 EST648474 KV3 Medicago truncatula cD... 56 4e-006
gb|CA922366.1|CA922366 EST640084 MTUS Medicago truncatula c... 56 4e-006
gb|BF633802.1|BF633802 NF066C10DT1F1081 Drought Medicago tr... 52 6e-005
gb|BG582575.1|BG582575 EST484320 GVN Medicago truncatula cD... 52 6e-005
gb|CA920234.1|CA920234 EST637952 MTUS Medicago truncatula c... 52 6e-005
gb|CX530147.1|CX530147 s13dNF44H02MJ025_246329 Methyl Jasmo... 52 6e-005
gb|CG922842.1|CG922842 MBEAQ22TR mth2 Medicago truncatula g... 48 0.001
emb|CR499620.1| mth2-176D11RM1 BAC end, cultivar Jemalong A... 46 0.004
gb|AL389091.1|AL389091 MtBC52G02F1 MtBC Medicago truncatula... 44 0.015
gb|AL389092.1|AL389092 MtBC52G02R1 MtBC Medicago truncatula... 44 0.015
gb|AW257533.1|AW257533 EST305670 KV2 Medicago truncatula cD... 42 0.059
gb|BE240062.1|BE240062 EST404111 MHRP- Medicago truncatula ... 42 0.059
gb|BG588238.1|BG588238 EST490047 MHRP- Medicago truncatula ... 42 0.059
gb|DW016236.1|DW016236 EST1225197 MTY Medicago truncatula c... 42 0.059
gb|AC140545.26| Medicago truncatula clone mth2-11g18, compl... 42 0.059
gb|CG919545.1|CG919545 MBEFO44TR mth2 Medicago truncatula g... 40 0.23
gb|CG920736.1|CG920736 MBENP20TF mth2 Medicago truncatula g... 40 0.23
gb|CG923276.1|CG923276 MBEEX29TFB mth2 Medicago truncatula ... 40 0.23
gb|CG927519.1|CG927519 MBEGF12TR mth2 Medicago truncatula g... 40 0.23
gb|CG933030.1|CG933030 MBEJH55TR mth2 Medicago truncatula g... 40 0.23
gb|CG936005.1|CG936005 MBEJK59TF mth2 Medicago truncatula g... 40 0.23
gb|CG937213.1|CG937213 MBEKA48TFB mth2 Medicago truncatula ... 40 0.23
gb|CG938133.1|CG938133 MBELT31TFB mth2 Medicago truncatula ... 40 0.23
gb|CG940259.1|CG940259 MBEMB69TR mth2 Medicago truncatula g... 40 0.23
gb|CG942813.1|CG942813 MBELL36TF mth2 Medicago truncatula g... 40 0.23
gb|CG951621.1|CG951621 MBEMT51TF mth2 Medicago truncatula g... 40 0.23
gb|CG953001.1|CG953001 MBEGI32TFB mth2 Medicago truncatula ... 40 0.23
gb|CG953385.1|CG953385 MBECI45TF mth2 Medicago truncatula g... 40 0.23
gb|CG953414.1|CG953414 MBEML22TF mth2 Medicago truncatula g... 40 0.23
gb|CG953555.1|CG953555 MBEDW35TRC mth2 Medicago truncatula ... 40 0.23
gb|CG955574.1|CG955574 MBEFO70TF mth2 Medicago truncatula g... 40 0.23
gb|CG957414.1|CG957414 MBEHW76TR mth2 Medicago truncatula g... 40 0.23
gb|CG957813.1|CG957813 MBEJA71TF mth2 Medicago truncatula g... 40 0.23
gb|CG958029.1|CG958029 MBEJQ45TFB mth2 Medicago truncatula ... 40 0.23
gb|CG958228.1|CG958228 MBEII67TR mth2 Medicago truncatula g... 40 0.23
gb|CG961700.1|CG961700 MBEKQ87TF mth2 Medicago truncatula g... 40 0.23
gb|CG962274.1|CG962274 MBEEU84TFB mth2 Medicago truncatula ... 40 0.23
gb|CG963620.1|CG963620 MBEID55TR mth2 Medicago truncatula g... 40 0.23
gb|CG964136.1|CG964136 MBEKB88TRB mth2 Medicago truncatula ... 40 0.23
gb|CG964173.1|CG964173 MBEBH01TF mth2 Medicago truncatula g... 40 0.23
gb|CG970543.1|CG970543 MBELI28TF mth2 Medicago truncatula g... 40 0.23
gb|CG974317.1|CG974317 MBEGE77TF mth2 Medicago truncatula g... 40 0.23
emb|CR328364.1| mte1-57I6FM1 BAC end, cultivar Jemalong A17... 40 0.23
emb|CR329604.1| mte1-59G3FM1 BAC end, cultivar Jemalong A17... 40 0.23
emb|CR329813.1| mte1-59I12FM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR342455.1| mte1-75O11FM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR342463.1| mte1-75O19RM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR347749.1| mte1-81B2FM1 BAC end, cultivar Jemalong A17... 40 0.23
emb|CR348226.1| mte1-82I14RM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR349294.1| mte1-83F14FM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR350063.1| mte1-84L4FM1 BAC end, cultivar Jemalong A17... 40 0.23
emb|CR350624.1| mte1-85P13RM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR351264.1| mte1-86L15RM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR479074.1| mth2-189C9FM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR479221.1| mth2-189A6FM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR480083.1| mth2-190H14FM1 BAC end, cultivar Jemalong A... 40 0.23
emb|CR480359.1| mth2-192E2FM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR480591.1| mth2-192N1FM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR486257.1| mth2-155H9RM2 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR487398.1| mth2-156M21RM1 BAC end, cultivar Jemalong A... 40 0.23
emb|CR487731.1| mth2-156L21RM1 BAC end, cultivar Jemalong A... 40 0.23
emb|CR488917.1| mth2-159C22FM1 BAC end, cultivar Jemalong A... 40 0.23
emb|CR489357.1| mth2-159L4RM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR490710.1| mth2-161F2FM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR490901.1| mth2-164E13RM1 BAC end, cultivar Jemalong A... 40 0.23
emb|CR490961.1| mth2-164K3RM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR491605.1| mth2-165E19RM1 BAC end, cultivar Jemalong A... 40 0.23
emb|CR493230.1| mth2-167O14FM1 BAC end, cultivar Jemalong A... 40 0.23
emb|CR494031.1| mth2-143D23RM1 BAC end, cultivar Jemalong A... 40 0.23
emb|CR497309.1| mth2-173C6FM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR499819.1| mth2-176H4FM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR500962.1| mth2-178B17FM1 BAC end, cultivar Jemalong A... 40 0.23
emb|CR294985.1| mte1-11G17RM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR295461.1| mte1-11D12FM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR299091.1| mte1-16L12RM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR300446.1| mte1-18F14RM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR300788.1| mte1-19E16RM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR303593.1| mte1-22D1FM1 BAC end, cultivar Jemalong A17... 40 0.23
emb|CR303798.1| mte1-22H10FM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR304973.1| mte1-24M16FM2 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR308626.1| mte1-3O3RM1 BAC end, cultivar Jemalong A17 ... 40 0.23
emb|CR310301.1| mte1-31H18RM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR311805.1| mte1-34G9FM1 BAC end, cultivar Jemalong A17... 40 0.23
emb|CR313725.1| mte1-36L22FM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR317579.1| mte1-42I15FM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR317875.1| mte1-42L15RM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR318333.1| mte1-43O6RM1 BAC end, cultivar Jemalong A17... 40 0.23
emb|CR319398.1| mte1-45C21RM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR320351.1| mte1-46M16RM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR322177.1| mte1-49M14RM1 BAC end, cultivar Jemalong A1... 40 0.23
emb|CR508547.1| mth4-7C11FM1 BAC end, cultivar Jemalong A17... 40 0.23
emb|CR513020.1| mth4-37L4FM1 BAC end, cultivar Jemalong A17... 40 0.23
emb|CR962983.1| mth4-12H21FM1 BAC end, cultivar Jemalong A1... 40 0.23
gb|AJ847501.1|AJ847501 AJ847501 MtSTA Medicago truncatula c... 40 0.23
gb|AC146555.5| Medicago truncatula clone mth2-10p14, comple... 40 0.23
gb|AC146704.8| Medicago truncatula clone mth2-107f11, compl... 40 0.23
gb|AC125474.16| Medicago truncatula clone mth2-16l11, compl... 40 0.23
gb|AC144893.15| Medicago truncatula clone mth2-29d23, compl... 40 0.23
gb|AC137552.11| Medicago truncatula clone mth2-9k5, complet... 40 0.23
gb|AC135959.22| Medicago truncatula clone mth2-26j19, compl... 40 0.23
gb|AC144727.11| Medicago truncatula clone mth2-8n1, complet... 40 0.23
gb|AC140720.21| Medicago truncatula clone mth2-17l10, compl... 40 0.23
gb|AC135415.27| Medicago truncatula clone mth2-10b9, comple... 40 0.23
gb|AC122171.21| Medicago truncatula clone mth2-23b18, compl... 40 0.23
gb|AC122728.32| Medicago truncatula clone mth2-22l4, comple... 40 0.23
gb|AC145767.28| Medicago truncatula clone mth2-11f1, comple... 40 0.23
gb|AC151598.2| Medicago truncatula chromosome 2 BAC clone m... 40 0.23
gb|AC121246.26| Medicago truncatula clone mth2-35m8, comple... 40 0.23
gb|AC139355.8| Medicago truncatula clone mth2-36o3, complet... 40 0.23
gb|AC138465.22| Medicago truncatula clone mth2-23h19, WORKI... 40 0.23
gb|AC148359.37| Medicago truncatula clone mth2-22k11, compl... 40 0.23
gb|AC140550.31| Medicago truncatula clone mth2-54a24, compl... 40 0.23
gb|AC140549.12| Medicago truncatula clone mth2-28o14, compl... 40 0.23
gb|AC146703.19| Medicago truncatula clone mth2-22o12, WORKI... 40 0.23
emb|CT009484.8| M.truncatula DNA sequence from clone MTH2-6... 40 0.23
gb|AC169667.1| Medicago truncatula chromosome 2 clone mth2-... 40 0.23
emb|CT025840.2| Medicago truncatula chromosome 5 clone mth4... 40 0.23
gb|AC149495.23| Medicago truncatula clone mth2-117o14, WORK... 40 0.23
gb|AC119409.25| Medicago truncatula clone mth2-10i9, comple... 40 0.23
gb|AC157757.24| Medicago truncatula clone mth2-16j22, compl... 40 0.23
gb|AC148763.14| Medicago truncatula clone mth2-29o24, compl... 40 0.23
emb|CT030245.4| Medicago truncatula chromosome 3 clone MTH2... 40 0.23
gb|AC148719.23| Medicago truncatula clone mth2-41m14, WORKI... 40 0.23
gb|AC169177.4| Medicago truncatula chromosome 7 BAC clone m... 40 0.23
gb|AC150877.14| Medicago truncatula clone mth2-167e16, WORK... 40 0.23
gb|AC175049.1| Medicago truncatula chromosome 7 clone mth2-... 40 0.23
gb|AC153162.5| Medicago truncatula clone mth2-58d22, WORKIN... 40 0.23
gb|AC175028.4| Medicago truncatula clone mth2-7e22, WORKING... 40 0.23
gb|AC174283.4| Medicago truncatula clone mth2-19m5, WORKING... 40 0.23
gb|AC174305.4| Medicago truncatula clone mth2-108j24, WORKI... 40 0.23
gb|AC171168.2| Medicago truncatula chromosome 2 clone mth2-... 40 0.23
gb|AC174336.3| Medicago truncatula clone mth2-157o10, WORKI... 40 0.23
gb|AC150445.20| Medicago truncatula clone mth2-101h21, WORK... 40 0.23
gb|AC175027.3| Medicago truncatula clone mth2-102d9, WORKIN... 40 0.23
emb|CT030253.7| Medicago truncatula chromosome 3 clone MTH2... 40 0.23
gb|AC144404.34| Medicago truncatula clone mth2-19f21, WORKI... 40 0.23
gb|AC166744.9| Medicago truncatula clone mth2-69h7, WORKING... 40 0.23
gb|AC171619.8| Medicago truncatula clone mth2-160a1, WORKIN... 40 0.23
gb|AC150877.15| Medicago truncatula clone mth2-167e16, WORK... 40 0.23
>gb|CX542314.1|CX542314 s13dNF82D03GS026_467944 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 551
Score = 58.0 bits (29), Expect = 1e-006
Identities = 119/149 (79%)
Strand = Plus / Plus
Query: 55 ccagcaaagtattttgcaaagctcttacgaaaggccatgaaaggtctaggcactgatgac 114
||||||||||||||||||||| | || ||||| ||||||||| |||| ||| ||||
Sbjct: 325 ccagcaaagtattttgcaaaggtgttgtataaggcaatgaaaggtttagggactaatgat 384
Query: 115 aagacacttataagggttgtggtgacgaggactgaaattgatatgcaatatatcaaggca 174
| ||||| |||||||| | || || |||||||| ||||||||| |||| ||||| ||
Sbjct: 385 accacactcataagggtcatcgtaacaaggactgagattgatatgaaatacatcaaagct 444
Query: 175 gagtacttcaagaagtataagaagccatt 203
|| || |||||| ||||||||| ||||
Sbjct: 445 gaatatgccaagaaatataagaagacatt 473
>gb|BE124894.1|BE124894 EST393929 GVN Medicago truncatula cDNA clone pGVN-68D13, mRNA
sequence
Length = 490
Score = 56.0 bits (28), Expect = 4e-006
Identities = 94/116 (81%)
Strand = Plus / Plus
Query: 55 ccagcaaagtattttgcaaagctcttacgaaaggccatgaaaggtctaggcactgatgac 114
||||||||||||||||||||| | || ||||| ||||||||| | || ||| ||||
Sbjct: 71 ccagcaaagtattttgcaaaggtgttgtataaggcgatgaaaggtatggggactaatgat 130
Query: 115 aagacacttataagggttgtggtgacgaggactgaaattgatatgcaatatatcaa 170
| ||||| |||||||| | || || |||||||| ||||||||||| ||||||||
Sbjct: 131 agcacactcataagggtcattgtaacaaggactgagattgatatgcagtatatcaa 186
>gb|BE240576.1|BE240576 EST404625 MHRP- Medicago truncatula cDNA clone pMHRP-45L4, mRNA
sequence
Length = 415
Score = 56.0 bits (28), Expect = 4e-006
Identities = 94/116 (81%)
Strand = Plus / Plus
Query: 55 ccagcaaagtattttgcaaagctcttacgaaaggccatgaaaggtctaggcactgatgac 114
||||||||||||||||||||| | || ||||| ||||||||| | || ||| ||||
Sbjct: 158 ccagcaaagtattttgcaaaggtgttgtataaggcgatgaaaggtatggggactaatgat 217
Query: 115 aagacacttataagggttgtggtgacgaggactgaaattgatatgcaatatatcaa 170
| ||||| |||||||| | || || |||||||| ||||||||||| ||||||||
Sbjct: 218 agcacactcataagggtcattgtaacaaggactgagattgatatgcagtatatcaa 273
>gb|BG644962.1|BG644962 EST506581 KV3 Medicago truncatula cDNA clone pKV3-38H22 5' end,
mRNA sequence
Length = 788
Score = 56.0 bits (28), Expect = 4e-006
Identities = 94/116 (81%)
Strand = Plus / Minus
Query: 55 ccagcaaagtattttgcaaagctcttacgaaaggccatgaaaggtctaggcactgatgac 114
||||||||||||||||||||| | || ||||| ||||||||| | || ||| ||||
Sbjct: 419 ccagcaaagtattttgcaaaggtgttgtataaggcgatgaaaggtatggggactaatgat 360
Query: 115 aagacacttataagggttgtggtgacgaggactgaaattgatatgcaatatatcaa 170
| ||||| |||||||| | || || |||||||| ||||||||||| ||||||||
Sbjct: 359 agcacactcataagggtcattgtaacaaggactgagattgatatgcagtatatcaa 304
>gb|BQ165199.1|BQ165199 EST611068 KVKC Medicago truncatula cDNA clone pKVKC-6G8, mRNA
sequence
Length = 780
Score = 56.0 bits (28), Expect = 4e-006
Identities = 94/116 (81%)
Strand = Plus / Minus
Query: 55 ccagcaaagtattttgcaaagctcttacgaaaggccatgaaaggtctaggcactgatgac 114
||||||||||||||||||||| | || ||||| ||||||||| | || ||| ||||
Sbjct: 419 ccagcaaagtattttgcaaaggtgttgtataaggcgatgaaaggtatggggactaatgat 360
Query: 115 aagacacttataagggttgtggtgacgaggactgaaattgatatgcaatatatcaa 170
| ||||| |||||||| | || || |||||||| ||||||||||| ||||||||
Sbjct: 359 agcacactcataagggtcattgtaacaaggactgagattgatatgcagtatatcaa 304
>gb|BQ165337.1|BQ165337 EST611206 KVKC Medicago truncatula cDNA clone pKVKC-8C11, mRNA
sequence
Length = 757
Score = 56.0 bits (28), Expect = 4e-006
Identities = 94/116 (81%)
Strand = Plus / Minus
Query: 55 ccagcaaagtattttgcaaagctcttacgaaaggccatgaaaggtctaggcactgatgac 114
||||||||||||||||||||| | || ||||| ||||||||| | || ||| ||||
Sbjct: 419 ccagcaaagtattttgcaaaggtgttgtataaggcgatgaaaggtatggggactaatgat 360
Query: 115 aagacacttataagggttgtggtgacgaggactgaaattgatatgcaatatatcaa 170
| ||||| |||||||| | || || |||||||| ||||||||||| ||||||||
Sbjct: 359 agcacactcataagggtcattgtaacaaggactgagattgatatgcagtatatcaa 304
>gb|CB891505.1|CB891505 EST648474 KV3 Medicago truncatula cDNA clone KV3-50H1, mRNA
sequence
Length = 707
Score = 56.0 bits (28), Expect = 4e-006
Identities = 94/116 (81%)
Strand = Plus / Minus
Query: 55 ccagcaaagtattttgcaaagctcttacgaaaggccatgaaaggtctaggcactgatgac 114
||||||||||||||||||||| | || ||||| ||||||||| | || ||| ||||
Sbjct: 368 ccagcaaagtattttgcaaaggtgttgtataaggcgatgaaaggtatggggactaatgat 309
Query: 115 aagacacttataagggttgtggtgacgaggactgaaattgatatgcaatatatcaa 170
| ||||| |||||||| | || || |||||||| ||||||||||| ||||||||
Sbjct: 308 agcacactcataagggtcattgtaacaaggactgagattgatatgcagtatatcaa 253
>gb|CA922366.1|CA922366 EST640084 MTUS Medicago truncatula cDNA clone MTUS-52G11, mRNA
sequence
Length = 667
Score = 56.0 bits (28), Expect = 4e-006
Identities = 94/116 (81%)
Strand = Plus / Minus
Query: 55 ccagcaaagtattttgcaaagctcttacgaaaggccatgaaaggtctaggcactgatgac 114
||||||||||||||||||||| | || ||||| ||||||||| | || ||| ||||
Sbjct: 416 ccagcaaagtattttgcaaaggtgttgtataaggcgatgaaaggtatggggactaatgat 357
Query: 115 aagacacttataagggttgtggtgacgaggactgaaattgatatgcaatatatcaa 170
| ||||| |||||||| | || || |||||||| ||||||||||| ||||||||
Sbjct: 356 agcacactcataagggtcattgtaacaaggactgagattgatatgcagtatatcaa 301
>gb|BF633802.1|BF633802 NF066C10DT1F1081 Drought Medicago truncatula cDNA clone NF066C10DT
5', mRNA sequence
Length = 594
Score = 52.0 bits (26), Expect = 6e-005
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 58 gcaaagtattttgcaaagctcttacgaaaggccatgaaaggtctaggcactgatgacaag 117
||||||||||| || ||| || |||| ||||| ||||||||||| || || ||||||| |
Sbjct: 335 gcaaagtatttcgcgaaggtcctacgtaaggcaatgaaaggtctcgggaccgatgacacg 394
Query: 118 acacttataagggt 131
| |||||| |||||
Sbjct: 395 aaacttatgagggt 408
>gb|BG582575.1|BG582575 EST484320 GVN Medicago truncatula cDNA clone pGVN-70G13 5' end,
mRNA sequence
Length = 725
Score = 52.0 bits (26), Expect = 6e-005
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 58 gcaaagtattttgcaaagctcttacgaaaggccatgaaaggtctaggcactgatgacaag 117
||||||||||| || ||| || |||| ||||| ||||||||||| || || ||||||| |
Sbjct: 326 gcaaagtatttcgcgaaggtcctacgtaaggcaatgaaaggtctcgggaccgatgacacg 385
Query: 118 acacttataagggt 131
| |||||| |||||
Sbjct: 386 aaacttatgagggt 399
>gb|CA920234.1|CA920234 EST637952 MTUS Medicago truncatula cDNA clone MTUS-25G6, mRNA
sequence
Length = 740
Score = 52.0 bits (26), Expect = 6e-005
Identities = 62/74 (83%)
Strand = Plus / Minus
Query: 58 gcaaagtattttgcaaagctcttacgaaaggccatgaaaggtctaggcactgatgacaag 117
||||||||||| || ||| || |||| ||||| ||||||||||| || || ||||||| |
Sbjct: 401 gcaaagtatttcgcgaaggtcctacgtaaggcaatgaaaggtctcgggaccgatgacacg 342
Query: 118 acacttataagggt 131
| |||||| |||||
Sbjct: 341 aaacttatgagggt 328
>gb|CX530147.1|CX530147 s13dNF44H02MJ025_246329 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 636
Score = 52.0 bits (26), Expect = 6e-005
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 58 gcaaagtattttgcaaagctcttacgaaaggccatgaaaggtctaggcactgatgacaag 117
||||||||||| || ||| || |||| ||||| ||||||||||| || || ||||||| |
Sbjct: 276 gcaaagtatttcgcgaaggtcctacgtaaggcaatgaaaggtctcgggaccgatgacacg 335
Query: 118 acacttataagggt 131
| |||||| |||||
Sbjct: 336 aaacttatgagggt 349
>gb|CG922842.1|CG922842 MBEAQ22TR mth2 Medicago truncatula genomic clone 15C19, DNA
sequence
Length = 961
Score = 48.1 bits (24), Expect = 0.001
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 8 gaaactttgaattcgcacttttag 31
||||||||||||||||||||||||
Sbjct: 24 gaaactttgaattcgcacttttag 47
>emb|CR499620.1| mth2-176D11RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 577
Score = 46.1 bits (23), Expect = 0.004
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgcactt 27
|||||||||||||||||||||||
Sbjct: 63 ctggaaactttgaattcgcactt 85
>gb|AL389091.1|AL389091 MtBC52G02F1 MtBC Medicago truncatula cDNA clone MtBC52G02 T3, mRNA
sequence
Length = 489
Score = 44.1 bits (22), Expect = 0.015
Identities = 70/86 (81%)
Strand = Plus / Plus
Query: 85 aaggccatgaaaggtctaggcactgatgacaagacacttataagggttgtggtgacgagg 144
||||| ||||||||| | || ||| |||| | ||||| |||||||| | || || |||
Sbjct: 336 aaggcgatgaaaggtatggggactaatgatagcacactcataagggtcattgtaacaagg 395
Query: 145 actgaaattgatatgcaatatatcaa 170
||||| ||||||||||| ||||||||
Sbjct: 396 actgagattgatatgcagtatatcaa 421
>gb|AL389092.1|AL389092 MtBC52G02R1 MtBC Medicago truncatula cDNA clone MtBC52G02 T7, mRNA
sequence
Length = 552
Score = 44.1 bits (22), Expect = 0.015
Identities = 70/86 (81%)
Strand = Plus / Plus
Query: 85 aaggccatgaaaggtctaggcactgatgacaagacacttataagggttgtggtgacgagg 144
||||| ||||||||| | || ||| |||| | ||||| |||||||| | || || |||
Sbjct: 109 aaggcgatgaaaggtatggggactaatgatagcacactcataagggtcattgtaacaagg 168
Query: 145 actgaaattgatatgcaatatatcaa 170
||||| ||||||||||| ||||||||
Sbjct: 169 actgagattgatatgcagtatatcaa 194
>gb|AW257533.1|AW257533 EST305670 KV2 Medicago truncatula cDNA clone KV2-10K21, mRNA
sequence
Length = 594
Score = 42.1 bits (21), Expect = 0.059
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 55 ccagcaaagtattttgcaaag 75
|||||||||||||||||||||
Sbjct: 430 ccagcaaagtattttgcaaag 410
>gb|BE240062.1|BE240062 EST404111 MHRP- Medicago truncatula cDNA clone pMHRP-41D6, mRNA
sequence
Length = 342
Score = 42.1 bits (21), Expect = 0.059
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 142 aggactgaaattgatatgcaatatatcaa 170
|||||||| ||||||||||| ||||||||
Sbjct: 13 aggactgagattgatatgcagtatatcaa 41
>gb|BG588238.1|BG588238 EST490047 MHRP- Medicago truncatula cDNA clone pMHRP-41D18, mRNA
sequence
Length = 486
Score = 42.1 bits (21), Expect = 0.059
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 142 aggactgaaattgatatgcaatatatcaa 170
|||||||| ||||||||||| ||||||||
Sbjct: 143 aggactgagattgatatgcagtatatcaa 171
Score = 42.1 bits (21), Expect = 0.059
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 ccagcaaagtattttgcaaag 75
|||||||||||||||||||||
Sbjct: 56 ccagcaaagtattttgcaaag 76
>gb|DW016236.1|DW016236 EST1225197 MTY Medicago truncatula cDNA clone MTYAE72, mRNA
sequence
Length = 824
Score = 42.1 bits (21), Expect = 0.059
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 ccagcaaagtattttgcaaag 75
|||||||||||||||||||||
Sbjct: 786 ccagcaaagtattttgcaaag 806
>gb|AC140545.26| Medicago truncatula clone mth2-11g18, complete sequence
Length = 129414
Score = 42.1 bits (21), Expect = 0.059
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 4 tctggaaactttgaattcgca 24
|||||||||||||||||||||
Sbjct: 117433 tctggaaactttgaattcgca 117453
>gb|CG919545.1|CG919545 MBEFO44TR mth2 Medicago truncatula genomic clone 45H15, DNA
sequence
Length = 917
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 58 ctggaaactttgaattcgca 77
>gb|CG920736.1|CG920736 MBENP20TF mth2 Medicago truncatula genomic clone 9D16, DNA
sequence
Length = 840
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 63 ctggaaactttgaattcgca 82
>gb|CG923276.1|CG923276 MBEEX29TFB mth2 Medicago truncatula genomic clone 41F10, DNA
sequence
Length = 844
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 63 ctggaaactttgaattcgca 82
>gb|CG927519.1|CG927519 MBEGF12TR mth2 Medicago truncatula genomic clone 49A24, DNA
sequence
Length = 424
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 58 ctggaaactttgaattcgca 77
>gb|CG933030.1|CG933030 MBEJH55TR mth2 Medicago truncatula genomic clone 67J14, DNA
sequence
Length = 919
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 58 ctggaaactttgaattcgca 77
>gb|CG936005.1|CG936005 MBEJK59TF mth2 Medicago truncatula genomic clone 68J21, DNA
sequence
Length = 339
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 22 ctggaaactttgaattcgca 41
>gb|CG937213.1|CG937213 MBEKA48TFB mth2 Medicago truncatula genomic clone 72G23, DNA
sequence
Length = 856
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 32 ctggaaactttgaattcgca 13
>gb|CG938133.1|CG938133 MBELT31TFB mth2 Medicago truncatula genomic clone 82F14, DNA
sequence
Length = 816
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 63 ctggaaactttgaattcgca 82
>gb|CG940259.1|CG940259 MBEMB69TR mth2 Medicago truncatula genomic clone 84K18, DNA
sequence
Length = 924
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 58 ctggaaactttgaattcgca 77
>gb|CG942813.1|CG942813 MBELL36TF mth2 Medicago truncatula genomic clone 80F24, DNA
sequence
Length = 207
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 63 ctggaaactttgaattcgca 82
>gb|CG951621.1|CG951621 MBEMT51TF mth2 Medicago truncatula genomic clone 4J6, DNA
sequence
Length = 904
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 63 ctggaaactttgaattcgca 82
>gb|CG953001.1|CG953001 MBEGI32TFB mth2 Medicago truncatula genomic clone 50E15, DNA
sequence
Length = 886
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 63 ctggaaactttgaattcgca 82
>gb|CG953385.1|CG953385 MBECI45TF mth2 Medicago truncatula genomic clone 26G17, DNA
sequence
Length = 852
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 58 ctggaaactttgaattcgca 77
>gb|CG953414.1|CG953414 MBEML22TF mth2 Medicago truncatula genomic clone 2D20, DNA
sequence
Length = 861
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 64 ctggaaactttgaattcgca 83
>gb|CG953555.1|CG953555 MBEDW35TRC mth2 Medicago truncatula genomic clone 35F21, DNA
sequence
Length = 747
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 59 ctggaaactttgaattcgca 78
>gb|CG955574.1|CG955574 MBEFO70TF mth2 Medicago truncatula genomic clone 45L19, DNA
sequence
Length = 310
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 63 ctggaaactttgaattcgca 82
>gb|CG957414.1|CG957414 MBEHW76TR mth2 Medicago truncatula genomic clone 59N7, DNA
sequence
Length = 929
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 58 ctggaaactttgaattcgca 77
>gb|CG957813.1|CG957813 MBEJA71TF mth2 Medicago truncatula genomic clone 66K21, DNA
sequence
Length = 861
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 63 ctggaaactttgaattcgca 82
>gb|CG958029.1|CG958029 MBEJQ45TFB mth2 Medicago truncatula genomic clone 70G17, DNA
sequence
Length = 740
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 32 ctggaaactttgaattcgca 13
>gb|CG958228.1|CG958228 MBEII67TR mth2 Medicago truncatula genomic clone 62K13, DNA
sequence
Length = 724
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 58 ctggaaactttgaattcgca 77
>gb|CG961700.1|CG961700 MBEKQ87TF mth2 Medicago truncatula genomic clone 76O5, DNA
sequence
Length = 912
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 63 ctggaaactttgaattcgca 82
>gb|CG962274.1|CG962274 MBEEU84TFB mth2 Medicago truncatula genomic clone 41M23, DNA
sequence
Length = 643
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 63 ctggaaactttgaattcgca 82
>gb|CG963620.1|CG963620 MBEID55TR mth2 Medicago truncatula genomic clone 60J14, DNA
sequence
Length = 937
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 58 ctggaaactttgaattcgca 77
>gb|CG964136.1|CG964136 MBEKB88TRB mth2 Medicago truncatula genomic clone 72O8, DNA
sequence
Length = 923
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 58 ctggaaactttgaattcgca 77
>gb|CG964173.1|CG964173 MBEBH01TF mth2 Medicago truncatula genomic clone 18B2, DNA
sequence
Length = 721
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 11 ctggaaactttgaattcgca 30
>gb|CG970543.1|CG970543 MBELI28TF mth2 Medicago truncatula genomic clone 80E7, DNA
sequence
Length = 505
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 63 ctggaaactttgaattcgca 82
>gb|CG974317.1|CG974317 MBEGE77TF mth2 Medicago truncatula genomic clone 49M9, DNA
sequence
Length = 836
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 63 ctggaaactttgaattcgca 82
>emb|CR328364.1| mte1-57I6FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 645
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 496 ctggaaactttgaattcgca 477
>emb|CR329604.1| mte1-59G3FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 744
Score = 40.1 bits (20), Expect = 0.23
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 5 ctggaaactttgaattcgca 24
||||||||||||||||||||
Sbjct: 552 ctggaaactttgaattcgca 533
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 164,095
Number of Sequences: 392609
Number of extensions: 164095
Number of successful extensions: 12033
Number of sequences better than 0.5: 145
Number of HSP's better than 0.5 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 11681
Number of HSP's gapped (non-prelim): 345
length of query: 666
length of database: 441,732,993
effective HSP length: 19
effective length of query: 647
effective length of database: 434,273,422
effective search space: 280974904034
effective search space used: 280974904034
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)