BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3023825.2.1
(1094 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL380335.1|AL380335 MtBB51G10F1 MtBB Medicago truncatula... 248 8e-064
gb|CB892354.1|CB892354 EST649323 KV3 Medicago truncatula cD... 214 1e-053
gb|CB894403.1|CB894403 EST647195 HOGA Medicago truncatula c... 208 7e-052
gb|CB891329.1|CB891329 EST648298 KV3 Medicago truncatula cD... 202 4e-050
gb|BG456284.1|BG456284 NF077B06PL1F1047 Phosphate starved l... 190 2e-046
gb|CA989442.1|CA989442 EST642950 GLSD Medicago truncatula c... 168 6e-040
gb|CA920769.1|CA920769 EST638487 MTUS Medicago truncatula c... 168 6e-040
gb|BG588794.1|BG588794 EST490603 MHRP- Medicago truncatula ... 165 1e-038
gb|CB891292.1|CB891292 EST648261 KV3 Medicago truncatula cD... 80 4e-013
gb|BI308813.1|BI308813 EST530223 GPOD Medicago truncatula c... 64 3e-008
gb|BG646492.1|BG646492 EST508111 HOGA Medicago truncatula c... 62 1e-007
gb|BE202887.1|BE202887 EST402909 KV1 Medicago truncatula cD... 60 4e-007
gb|AL382946.1|AL382946 MtBC10H06R1 MtBC Medicago truncatula... 60 4e-007
gb|DW018053.1|DW018053 EST1227014 MTY Medicago truncatula c... 60 4e-007
gb|AC147179.15| Medicago truncatula clone mth2-142n19, comp... 60 4e-007
gb|BE202886.1|BE202886 EST402908 KV1 Medicago truncatula cD... 50 4e-004
gb|CG945410.1|CG945410 MBEGX73TR mth2 Medicago truncatula g... 48 0.002
gb|BE320689.2|BE320689 NF035F02RT1F1015 Developing root Med... 42 0.097
gb|AC157981.1| Medicago truncatula clone mth2-69d7, WORKING... 40 0.38
>gb|AL380335.1|AL380335 MtBB51G10F1 MtBB Medicago truncatula cDNA clone MtBB51G10 T3, mRNA
sequence
Length = 479
Score = 248 bits (125), Expect = 8e-064
Identities = 361/437 (82%), Gaps = 2/437 (0%)
Strand = Plus / Plus
Query: 10 gggatattctccctcctcgtaaaattaaggatgttcacgccaaaaggcctaaggattggg 69
||||||||||||||||||||||||| || ||| | | || |||| |||| || ||||
Sbjct: 20 gggatattctccctcctcgtaaaatcaaagatctcaaggcaaaaaagcctgcagactggg 79
Query: 70 atgacagagaatatattgaagatcctgatgaagttaagccagagggctatgattctatcc 129
| ||||||||||| |||||||| ||| ||| || || || ||||| |||||||| ||||
Sbjct: 80 aagacagagaatacattgaagaccctaatgctgtcaaacctgagggatatgattcaatcc 139
Query: 130 caaaacagattcctgatccgaaggacaaaaagcctgacacatgggatgaagatgaggatg 189
|| | | ||||||||||| |||| ||| ||||||| | ||||||||||| || ||||
Sbjct: 140 cagcagaaattcctgatccaaaggctaaagagcctgatagttgggatgaagacgaagatg 199
Query: 190 gaatatggaagcc-cagaatggtatcaaatccagcatacaagggaccttggaaacgcaag 248
|||||||||||| | ||| | || | |||||||||||||| ||||| |||||||| |||
Sbjct: 200 gaatatggaagcggccgaa-gataccgaatccagcatacaaaggaccatggaaacgaaag 258
Query: 249 agaattaaaaatcctaactacaagggtaaatggaagaccccatggatcgataatccagag 308
| ||| || |||||||||||||| || |||||||| || |||||||| ||||||||||||
Sbjct: 259 aaaatcaagaatcctaactacaaagggaaatggaaaactccatggatagataatccagag 318
Query: 309 tttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaattgaagtt 368
||||| ||||| || |||||||||||||| |||||| | || ||| | || || ||||||
Sbjct: 319 tttgaagatgaccctgatctttatgtgcttaagcctatcaaatatgtcggcatagaagtt 378
Query: 369 tggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatgaccctgagtat 428
|||||||| |||| ||||||||| || ||||||||| ||||||| ||||| ||||| |||
Sbjct: 379 tggcaggttaaaggtggttcagtatttgacaacattttgatttgcgatgatcctgaatat 438
Query: 429 gcaagaaaggttgttga 445
|||| | | ||||||||
Sbjct: 439 gcaaaacaagttgttga 455
>gb|CB892354.1|CB892354 EST649323 KV3 Medicago truncatula cDNA clone KV3-54A7, mRNA
sequence
Length = 715
Score = 214 bits (108), Expect = 1e-053
Identities = 281/336 (83%), Gaps = 2/336 (0%)
Strand = Plus / Minus
Query: 111 gagggctatgattctatcccaaaacagattcctgatccgaaggacaaaaagcctgacaca 170
||||| |||||||| |||||| | | ||||||||||| |||| ||| ||| ||| |
Sbjct: 705 gagggatatgattcaatcccagcagaaattcctgatccaaaggctaaagagcttgatagt 646
Query: 171 tgggatgaagatgaggatggaatatggaagc-ccagaatggtatcaaatccagcatacaa 229
||||||||||| || |||||||||||||||| || ||| | || | ||||||||||||||
Sbjct: 645 tgggatgaagacgaagatggaatatggaagcgcccgaa-gataccgaatccagcatacaa 587
Query: 230 gggaccttggaaacgcaagagaattaaaaatcctaactacaagggtaaatggaagacccc 289
||||| |||||||| |||| ||| || |||||||||||||| || |||||||| || ||
Sbjct: 586 aggaccatggaaacgaaagaaaatcaagaatcctaactacaaagggaaatggaaaactcc 527
Query: 290 atggatcgataatccagagtttgaggatgatccagatctttatgtgctgaagcctttgaa 349
|||||| ||||||||||||||||| ||||| || |||||||||||||| |||||| | ||
Sbjct: 526 atggatagataatccagagtttgaagatgaccctgatctttatgtgcttaagcctatcaa 467
Query: 350 gtatattggaattgaagtttggcaggtaaaagctggttcagttttcgacaacattctgat 409
||| | || || |||||||||||||| |||| ||||||||| || ||||||||| ||||
Sbjct: 466 atatgtcggcatagaagtttggcaggttaaaggtggttcagtatttgacaacattttgat 407
Query: 410 ttgtgatgaccctgagtatgcaagaaaggttgttga 445
||| ||||| ||||| ||||||| | | ||||||||
Sbjct: 406 ttgcgatgatcctgaatatgcaaaacaagttgttga 371
>gb|CB894403.1|CB894403 EST647195 HOGA Medicago truncatula cDNA clone HOGA-31G7, mRNA
sequence
Length = 688
Score = 208 bits (105), Expect = 7e-052
Identities = 260/309 (84%), Gaps = 2/309 (0%)
Strand = Plus / Plus
Query: 138 attcctgatccgaaggacaaaaagcctgacacatgggatgaagatgaggatggaatatgg 197
||||||||||| |||| ||| ||||||| | ||||||||||| || ||||||||||||
Sbjct: 19 attcctgatccaaaggctaaagagcctgatagttgggatgaagacgaagatggaatatgg 78
Query: 198 aagcc-cagaatggtatcaaatccagcatacaagggaccttggaaacgcaagagaattaa 256
|||| | ||| | || | |||||||||||||| ||||| |||||||| |||| ||| ||
Sbjct: 79 aagcggccgaa-gataccgaatccagcatacaaaggaccatggaaacgaaagaaaatcaa 137
Query: 257 aaatcctaactacaagggtaaatggaagaccccatggatcgataatccagagtttgagga 316
|||||||||||||| || |||||||| || |||||||| ||||||||||||||||| ||
Sbjct: 138 gaatcctaactacaaagggaaatggaaaactccatggatagataatccagagtttgaaga 197
Query: 317 tgatccagatctttatgtgctgaagcctttgaagtatattggaattgaagtttggcaggt 376
||| || |||||||||||||| |||||| | || ||| | || || ||||||||||||||
Sbjct: 198 tgaccctgatctttatgtgcttaagcctatcaaatatgtcggcatagaagtttggcaggt 257
Query: 377 aaaagctggttcagttttcgacaacattctgatttgtgatgaccctgagtatgcaagaaa 436
|||| ||||||||| || ||||||||| ||||||| ||||| ||||| ||||||| | |
Sbjct: 258 taaaggtggttcagtatttgacaacattttgatttgcgatgatcctgaatatgcaaaaca 317
Query: 437 ggttgttga 445
||||||||
Sbjct: 318 agttgttga 326
>gb|CB891329.1|CB891329 EST648298 KV3 Medicago truncatula cDNA clone KV3-49L8, mRNA
sequence
Length = 871
Score = 202 bits (102), Expect = 4e-050
Identities = 336/410 (81%), Gaps = 3/410 (0%)
Strand = Plus / Plus
Query: 10 gggatattctccctcctcgtaaaattaaggatgttcacgccaaaaggcctaaggattggg 69
||||||||||||||||||||||||| || ||| | | || |||| |||| || ||||
Sbjct: 463 gggatattctccctcctcgtaaaatcaaagatctcaaggcaaaaaagcctgcagactggg 522
Query: 70 atgacagagaatatattgaagatcctgatgaagttaagccagagggctatgattctatcc 129
| ||||||||||| |||||||| ||| ||| || || || ||||| |||||||| ||||
Sbjct: 523 aagacagagaatacattgaagaccctaatgctgtcaaacctgagggatatgattcaatcc 582
Query: 130 caaaacagattcctgatccgaaggacaaaaagcctgacacatgggatgaagatgaggatg 189
|| | | ||||||||||| |||| ||| ||||||| | ||||||||||| || ||||
Sbjct: 583 cagcagaaattcctgatccaaaggctaaagagcctgatagttgggatgaagacgaagatg 642
Query: 190 gaatatggaagcc-cagaatggtatcaaatccagcatacaagggaccttggaaacgcaag 248
|||||||||||| | ||| | || | |||||||||||||| ||||| |||||||| |||
Sbjct: 643 gaatatggaagcggccgaa-gataccgaatccagcatacaaaggaccatggaaacgaaag 701
Query: 249 agaattaaaaatcctaactacaagggtaaatggaagaccccatggatcgataatccagag 308
| ||| || |||||||||||||| || |||||||| || |||||||| ||||||||||||
Sbjct: 702 a-aatcaagaatcctaactacaaagggaaatggaaaactccatggatagataatccagag 760
Query: 309 tttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaattgaagtt 368
||||| ||||| || |||||||||||||| |||||| | || ||| | || || ||||||
Sbjct: 761 tttgaagatgaccctgatctttatgtgcttaagcctatcaaatatgtcggcatagaagtt 820
Query: 369 tggcaggtaaaagctggttcagttttcgacaacattctgatttgtgatga 418
|||||||| |||| | ||||| || ||||||||| ||||||| |||||
Sbjct: 821 tggcaggttaaagggtggtcagtatttgacaacattttgatttgcgatga 870
>gb|BG456284.1|BG456284 NF077B06PL1F1047 Phosphate starved leaf Medicago truncatula cDNA
clone NF077B06PL 5', mRNA sequence
Length = 630
Score = 190 bits (96), Expect = 2e-046
Identities = 278/336 (82%), Gaps = 2/336 (0%)
Strand = Plus / Plus
Query: 10 gggatattctccctcctcgtaaaattaaggatgttcacgccaaaaggcctaaggattggg 69
||||||||||||||||||||||||| || ||| | | || |||| |||| || ||||
Sbjct: 271 gggatattctccctcctcgtaaaatcaaagatctcaaggcaaaaaagcctgcagactggg 330
Query: 70 atgacagagaatatattgaagatcctgatgaagttaagccagagggctatgattctatcc 129
| ||||||||||| |||||||| ||| ||| || || || ||||| |||||||| ||||
Sbjct: 331 aagacagagaatacattgaagaccctaatgctgtcaaacctgagggatatgattcaatcc 390
Query: 130 caaaacagattcctgatccgaaggacaaaaagcctgacacatgggatgaagatgaggatg 189
|| | | ||||||||||| |||| ||| ||||||| | ||||||||||| || ||||
Sbjct: 391 cagcagaaattcctgatccaaaggctaaagagcctgatagttgggatgaagacgaagatg 450
Query: 190 gaatatggaagcc-cagaatggtatcaaatccagcatacaagggaccttggaaacgcaag 248
|||||||||||| | ||| | || | |||||||||||||| ||||| |||||||| |||
Sbjct: 451 gaatatggaagcggccgaa-gataccgaatccagcatacaaaggaccatggaaacgaaag 509
Query: 249 agaattaaaaatcctaactacaagggtaaatggaagaccccatggatcgataatccagag 308
| ||| || |||||||||||||| || |||||||| || |||||||| ||||||||||||
Sbjct: 510 aaaatcaagaatcctaactacaaagggaaatggaaaactccatggatagataatccagag 569
Query: 309 tttgaggatgatccagatctttatgtgctgaagcct 344
||||| ||||| || |||||||||||||| ||||||
Sbjct: 570 tttgaagatgaccctgatctttatgtgcttaagcct 605
>gb|CA989442.1|CA989442 EST642950 GLSD Medicago truncatula cDNA clone pGLSD-41H5, mRNA
sequence
Length = 529
Score = 168 bits (85), Expect = 6e-040
Identities = 184/217 (84%)
Strand = Plus / Plus
Query: 216 aatccagcatacaagggaccttggaaacgcaagagaattaaaaatcctaactacaagggt 275
||||||||||||| ||||| |||||||| |||| ||| || || || |||||||||||
Sbjct: 278 aatccagcatacagaggaccatggaaacgaaagaaaatcaagaaccccaactacaaggga 337
Query: 276 aaatggaagaccccatggatcgataatccagagtttgaggatgatccagatctttatgtg 335
|| |||||||| |||||||| ||||| ||||| |||||||||||||| ||||||||||||
Sbjct: 338 aagtggaagactccatggattgataacccagaatttgaggatgatcctgatctttatgtg 397
Query: 336 ctgaagcctttgaagtatattggaattgaagtttggcaggtaaaagctggttcagttttc 395
||||| || | |||||| |||| |||||||| ||||||||||| |||||||| |||
Sbjct: 398 ctgaaaccaataaagtatgttggcattgaagtgtggcaggtaaaggctggttcgatttat 457
Query: 396 gacaacattctgatttgtgatgaccctgagtatgcaa 432
|||||||| | |||||||||||||| |||||||||
Sbjct: 458 gacaacatcttaatttgtgatgacccacagtatgcaa 494
Score = 50.1 bits (25), Expect = 4e-004
Identities = 109/137 (79%)
Strand = Plus / Plus
Query: 66 tgggatgacagagaatatattgaagatcctgatgaagttaagccagagggctatgattct 125
|||||||| ||||| || ||||| | |||||||| || || |||||||| ||||||||
Sbjct: 128 tgggatgatagagagtacattgagaaccctgatgatgtcaaaccagagggatatgattca 187
Query: 126 atcccaaaacagattcctgatccgaaggacaaaaagcctgacacatgggatgaagatgag 185
|| ||| | | ||||| |||||||| | ||||||||||| |||||||| || ||
Sbjct: 188 attccagcagaaattcccgatccgaaagccaaaaagcctgctgactgggatgatgaagac 247
Query: 186 gatggaatatggaagcc 202
|||||| ||||||||||
Sbjct: 248 gatggactatggaagcc 264
>gb|CA920769.1|CA920769 EST638487 MTUS Medicago truncatula cDNA clone MTUS-32G8, mRNA
sequence
Length = 746
Score = 168 bits (85), Expect = 6e-040
Identities = 184/217 (84%)
Strand = Plus / Minus
Query: 216 aatccagcatacaagggaccttggaaacgcaagagaattaaaaatcctaactacaagggt 275
||||||||||||| ||||| |||||||| |||| ||| || || || |||||||||||
Sbjct: 595 aatccagcatacagaggaccatggaaacgaaagaaaatcaagaaccccaactacaaggga 536
Query: 276 aaatggaagaccccatggatcgataatccagagtttgaggatgatccagatctttatgtg 335
|| |||||||| |||||||| ||||| ||||| |||||||||||||| ||||||||||||
Sbjct: 535 aagtggaagactccatggattgataacccagaatttgaggatgatcctgatctttatgtg 476
Query: 336 ctgaagcctttgaagtatattggaattgaagtttggcaggtaaaagctggttcagttttc 395
||||| || | |||||| |||| |||||||| ||||||||||| |||||||| |||
Sbjct: 475 ctgaaaccaataaagtatgttggcattgaagtgtggcaggtaaaggctggttcgatttat 416
Query: 396 gacaacattctgatttgtgatgaccctgagtatgcaa 432
|||||||| | |||||||||||||| |||||||||
Sbjct: 415 gacaacatcttaatttgtgatgacccacagtatgcaa 379
Score = 73.8 bits (37), Expect = 3e-011
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 462 aatagggaggctgaaaaggaagcttttgaagaagctgaaaa 502
||||||||||||||||||||||||||||||||||| |||||
Sbjct: 349 aatagggaggctgaaaaggaagcttttgaagaagcggaaaa 309
Score = 50.1 bits (25), Expect = 4e-004
Identities = 109/137 (79%)
Strand = Plus / Minus
Query: 66 tgggatgacagagaatatattgaagatcctgatgaagttaagccagagggctatgattct 125
|||||||| ||||| || ||||| | |||||||| || || |||||||| ||||||||
Sbjct: 745 tgggatgatagagagtacattgagaaccctgatgatgtcaaaccagagggatatgattca 686
Query: 126 atcccaaaacagattcctgatccgaaggacaaaaagcctgacacatgggatgaagatgag 185
|| ||| | | ||||| |||||||| | ||||||||||| |||||||| || ||
Sbjct: 685 attccagcagaaattcccgatccgaaagccaaaaagcctgctgactgggatgatgaagac 626
Query: 186 gatggaatatggaagcc 202
|||||| ||||||||||
Sbjct: 625 gatggactatggaagcc 609
>gb|BG588794.1|BG588794 EST490603 MHRP- Medicago truncatula cDNA clone pMHRP-57F9, mRNA
sequence
Length = 739
Score = 165 bits (83), Expect = 1e-038
Identities = 256/311 (82%), Gaps = 2/311 (0%)
Strand = Plus / Plus
Query: 10 gggatattctccctcctcgtaaaattaaggatgttcacgccaaaaggcctaaggattggg 69
||||||||||||||||||||||||| || ||| | | || |||| |||| || ||||
Sbjct: 425 gggatattctccctcctcgtaaaatcaaagatctcaaggcaaaaaagcctgcagactggg 484
Query: 70 atgacagagaatatattgaagatcctgatgaagttaagccagagggctatgattctatcc 129
| ||||||||||| |||||||| ||| ||| || || || ||||| |||||||| ||||
Sbjct: 485 aagacagagaatacattgaagaccctaatgctgtcaaacctgagggatatgattcaatcc 544
Query: 130 caaaacagattcctgatccgaaggacaaaaagcctgacacatgggatgaagatgaggatg 189
|| | | ||||||||||| |||| ||| ||||||| | ||||||||||| || ||||
Sbjct: 545 cagcagaaattcctgatccaaaggctaaagagcctgatagttgggatgaagacgaagatg 604
Query: 190 gaatatggaagcc-cagaatggtatcaaatccagcatacaagggaccttggaaacgcaag 248
|||||||||||| | ||| | || | |||||||||||||| ||||| |||||||| |||
Sbjct: 605 gaatatggaagcggccgaa-gataccgaatccagcatacaaaggaccatggaaacgaaag 663
Query: 249 agaattaaaaatcctaactacaagggtaaatggaagaccccatggatcgataatccagag 308
| ||| || |||||||||||||| || |||||||| || |||||||| ||||||||||||
Sbjct: 664 aaaatcaagaatcctaactacaaagggaaatggaaaactccatggatagataatccagag 723
Query: 309 tttgaggatga 319
||||| |||||
Sbjct: 724 tttgaagatga 734
>gb|CB891292.1|CB891292 EST648261 KV3 Medicago truncatula cDNA clone KV3-49D12, mRNA
sequence
Length = 765
Score = 79.8 bits (40), Expect = 4e-013
Identities = 152/188 (80%), Gaps = 1/188 (0%)
Strand = Plus / Plus
Query: 10 gggatattctccctcctcgtaaaattaaggatgttcacgccaaaaggcctaaggattggg 69
||||||||||||||||||||||||| || ||| | | || |||| |||| || ||||
Sbjct: 530 gggatattctccctcctcgtaaaatcaaagatctcaaggcaaaaaagcctgcagactggg 589
Query: 70 atgacagagaatatattgaagatcctgatgaagttaagccagagggctatgattctatcc 129
| ||||||||||| |||||||| ||| ||| || || || ||||| |||||||| ||||
Sbjct: 590 aagacagagaatacattgaagaccctaatgctgtcaaacctgagggatatgattcaatcc 649
Query: 130 caaaacagattcctgatccgaaggacaaaaagcctgacacatgggatgaagatgaggatg 189
|| | | ||||||||||| |||| ||| ||||||| | ||||||||||| || ||||
Sbjct: 650 cagcagaaattcctgatcc-aaggctaaagagcctgatagttgggatgaagacgaagatg 708
Query: 190 gaatatgg 197
||||||||
Sbjct: 709 gaatatgg 716
>gb|BI308813.1|BI308813 EST530223 GPOD Medicago truncatula cDNA clone pGPOD-8F20 5' end,
mRNA sequence
Length = 559
Score = 63.9 bits (32), Expect = 3e-008
Identities = 116/144 (80%)
Strand = Plus / Plus
Query: 10 gggatattctccctcctcgtaaaattaaggatgttcacgccaaaaggcctaaggattggg 69
||||||||||||||||||||||||| || ||| | | || |||| |||| || ||||
Sbjct: 416 gggatattctccctcctcgtaaaatcaaagatctcaaggcaaaaaagcctgcagactggg 475
Query: 70 atgacagagaatatattgaagatcctgatgaagttaagccagagggctatgattctatcc 129
| ||||||||||| |||||||| ||| ||| || || || ||||| |||||||| ||||
Sbjct: 476 aagacagagaatacattgaagaccctaatgctgtcaaacctgagggatatgattcaatcc 535
Query: 130 caaaacagattcctgatccgaagg 153
|| | | ||||||||||| ||||
Sbjct: 536 cagcagaaattcctgatccaaagg 559
>gb|BG646492.1|BG646492 EST508111 HOGA Medicago truncatula cDNA clone pHOGA-7P24 5' end,
mRNA sequence
Length = 801
Score = 61.9 bits (31), Expect = 1e-007
Identities = 112/139 (80%)
Strand = Plus / Plus
Query: 10 gggatattctccctcctcgtaaaattaaggatgttcacgccaaaaggcctaaggattggg 69
||||||||||||||||||||||||| || ||| | | || |||| |||| || ||||
Sbjct: 634 gggatattctccctcctcgtaaaatcaaagatctcaaggcaaaaaagcctgcagactggg 693
Query: 70 atgacagagaatatattgaagatcctgatgaagttaagccagagggctatgattctatcc 129
| ||||||||||| |||||||| ||| ||| || || || ||||| |||||||| ||||
Sbjct: 694 aagacagagaatacattgaagaccctaatgctgtcaaacctgagggatatgattcaatcc 753
Query: 130 caaaacagattcctgatcc 148
|| | | |||||||||||
Sbjct: 754 cagcagaaattcctgatcc 772
>gb|BE202887.1|BE202887 EST402909 KV1 Medicago truncatula cDNA clone pKV1-3F7, mRNA
sequence
Length = 720
Score = 60.0 bits (30), Expect = 4e-007
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 216 aatccagcatacaagggaccttggaaacgcaagagaattaaaaatcctaactacaagggt 275
||||||||||||| ||||| |||||||| |||| ||| || || || |||||||| ||
Sbjct: 634 aatccagcatacagaggaccatggaaacgaaagaaaatcaagaaccccaactacaaagga 693
Query: 276 aaatggaagaccccatggatcgataa 301
|| |||||||| |||||||| |||||
Sbjct: 694 aagtggaagactccatggattgataa 719
Score = 50.1 bits (25), Expect = 4e-004
Identities = 109/137 (79%)
Strand = Plus / Plus
Query: 66 tgggatgacagagaatatattgaagatcctgatgaagttaagccagagggctatgattct 125
|||||||| ||||| || ||||| | |||||||| || || |||||||| ||||||||
Sbjct: 484 tgggatgatagagagtacattgagaaccctgatgatgtcaaaccagagggatatgattca 543
Query: 126 atcccaaaacagattcctgatccgaaggacaaaaagcctgacacatgggatgaagatgag 185
|| ||| | | ||||| |||||||| | ||||||||||| |||||||| || ||
Sbjct: 544 attccagcagaaattcccgatccgaaagccaaaaagcctgctgactgggatgatgaagac 603
Query: 186 gatggaatatggaagcc 202
|||||| ||||||||||
Sbjct: 604 gatggactatggaagcc 620
>gb|AL382946.1|AL382946 MtBC10H06R1 MtBC Medicago truncatula cDNA clone MtBC10H06 T7, mRNA
sequence
Length = 495
Score = 60.0 bits (30), Expect = 4e-007
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 469 aggctgaaaaggaagcttttgaagaagctgaaaa 502
|||||||||||||||||||||||||||| |||||
Sbjct: 10 aggctgaaaaggaagcttttgaagaagcggaaaa 43
>gb|DW018053.1|DW018053 EST1227014 MTY Medicago truncatula cDNA clone MTYB166, mRNA
sequence
Length = 798
Score = 60.0 bits (30), Expect = 4e-007
Identities = 99/122 (81%)
Strand = Plus / Plus
Query: 10 gggatattctccctcctcgtaaaattaaggatgttcacgccaaaaggcctaaggattggg 69
||||||||||||||||||||||||| || ||| | | || |||| |||| || ||||
Sbjct: 659 gggatattctccctcctcgtaaaatcaaagatctcaaggcaaaaaagcctgcagactggg 718
Query: 70 atgacagagaatatattgaagatcctgatgaagttaagccagagggctatgattctatcc 129
| ||||||||||| |||||||| ||| ||| || || || ||||| |||||||| ||||
Sbjct: 719 aagacagagaatacattgaagaccctaatgccgtcaaacctgagggatatgattcaatcc 778
Query: 130 ca 131
||
Sbjct: 779 ca 780
>gb|AC147179.15| Medicago truncatula clone mth2-142n19, complete sequence
Length = 113361
Score = 60.0 bits (30), Expect = 4e-007
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 304 cagagtttgaggatgatccagatctttatgtgctgaagcctttgaagtatattggaattg 363
|||||||||| ||||| || |||||||||||||| |||||| | || ||| | || || |
Sbjct: 107052 cagagtttgaagatgaccctgatctttatgtgcttaagcctatcaaatatgtcggcatag 107111
Query: 364 aagtttggcaggta 377
||||||||||||||
Sbjct: 107112 aagtttggcaggta 107125
Score = 58.0 bits (29), Expect = 2e-006
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 258 aatcctaactacaagggtaaatggaagaccccatggatcgataatccag 306
|||||||||||||| || |||||||| || |||||||| ||||||||||
Sbjct: 106902 aatcctaactacaaagggaaatggaaaactccatggatagataatccag 106950
Score = 50.1 bits (25), Expect = 4e-004
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 10 gggatattctccctcctcgtaaaat 34
|||||||||||||||||||||||||
Sbjct: 105746 gggatattctccctcctcgtaaaat 105770
Score = 46.1 bits (23), Expect = 0.006
Identities = 64/75 (85%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 171 tgggatgaagatgaggatggaatatggaagcc-cagaatggtatcaaatccagcatacaa 229
||||||||||| || |||||||||||||||| | ||| | || | ||||||||||||||
Sbjct: 106706 tgggatgaagacgaagatggaatatggaagcggccgaa-gataccgaatccagcatacaa 106764
Query: 230 gggaccttggaaacg 244
||||| ||||||||
Sbjct: 106765 aggaccatggaaacg 106779
>gb|BE202886.1|BE202886 EST402908 KV1 Medicago truncatula cDNA clone pKV1-3F7, mRNA
sequence
Length = 644
Score = 50.1 bits (25), Expect = 4e-004
Identities = 109/137 (79%)
Strand = Plus / Plus
Query: 66 tgggatgacagagaatatattgaagatcctgatgaagttaagccagagggctatgattct 125
|||||||| ||||| || ||||| | |||||||| || || |||||||| ||||||||
Sbjct: 477 tgggatgatagagagtacattgagaaccctgatgatgtcaaaccagagggatatgattca 536
Query: 126 atcccaaaacagattcctgatccgaaggacaaaaagcctgacacatgggatgaagatgag 185
|| ||| | | ||||| |||||||| | ||||||||||| |||||||| || ||
Sbjct: 537 attccagcagaaattcccgatccgaaagccaaaaagcctgctgactgggatgatgaagac 596
Query: 186 gatggaatatggaagcc 202
|||||| ||||||||||
Sbjct: 597 gatggactatggaagcc 613
>gb|CG945410.1|CG945410 MBEGX73TR mth2 Medicago truncatula genomic clone 53N2, DNA sequence
Length = 759
Score = 48.1 bits (24), Expect = 0.002
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 475 aaaaggaagcttttgaagaagctgaaaa 502
|||||||||||||||||||||| |||||
Sbjct: 714 aaaaggaagcttttgaagaagcggaaaa 687
>gb|BE320689.2|BE320689 NF035F02RT1F1015 Developing root Medicago truncatula cDNA clone
NF035F02RT 5', mRNA sequence
Length = 386
Score = 42.1 bits (21), Expect = 0.097
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 10 gggatattctccctcctcgtaaaat 34
||||||||||||||||| |||||||
Sbjct: 342 gggatattctccctcctggtaaaat 366
>gb|AC157981.1| Medicago truncatula clone mth2-69d7, WORKING DRAFT SEQUENCE, 22
unordered pieces
Length = 74472
Score = 40.1 bits (20), Expect = 0.38
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 485 ttttgaagaagctgaaaagg 504
||||||||||||||||||||
Sbjct: 25212 ttttgaagaagctgaaaagg 25231
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 396,087
Number of Sequences: 392609
Number of extensions: 396087
Number of successful extensions: 32270
Number of sequences better than 0.5: 20
Number of HSP's better than 0.5 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 32208
Number of HSP's gapped (non-prelim): 60
length of query: 1094
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1074
effective length of database: 433,880,813
effective search space: 465987993162
effective search space used: 465987993162
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)