BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2969865.2.1
(675 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF644261.1|BF644261 NF061F08EC1F1074 Elicited cell cultu... 137 1e-030
gb|AW573942.1|AW573942 EST316533 GVN Medicago truncatula cD... 131 8e-029
gb|BF649434.1|BF649434 NF080B09EC1F1076 Elicited cell cultu... 131 8e-029
gb|BF650818.1|BF650818 NF097B10EC1F1079 Elicited cell cultu... 131 8e-029
gb|BI266739.1|BI266739 NF085B07IN1F1061 Insect herbivory Me... 131 8e-029
gb|BM779378.1|BM779378 EST589954 KV2 Medicago truncatula cD... 131 8e-029
gb|AJ497473.1|AJ497473 AJ497473 MTFLOW Medicago truncatula ... 131 8e-029
gb|CX520933.1|CX520933 s13dNF59C06VI040_449652 Virus-Infect... 131 8e-029
gb|DW016473.1|DW016473 EST1225434 MTY Medicago truncatula c... 131 8e-029
gb|AL376211.1|AL376211 MtBB22A12F1 MtBB Medicago truncatula... 119 3e-025
gb|BG455780.1|BG455780 NF067D09PL1F1076 Phosphate starved l... 119 3e-025
gb|AJ847442.1|AJ847442 AJ847442 MtSTA Medicago truncatula c... 119 3e-025
gb|BG648003.1|BG648003 EST509622 HOGA Medicago truncatula c... 111 8e-023
gb|DW018764.1|DW018764 EST1227725 MTY Medicago truncatula c... 101 7e-020
gb|CX538446.1|CX538446 s13dNF79E01GS003_460144 Germinating ... 98 1e-018
gb|AC153350.13| Medicago truncatula clone mth2-77l10, WORKI... 90 3e-016
gb|BI272395.1|BI272395 NF020H02FL1F1027 Developing flower M... 68 1e-009
>gb|BF644261.1|BF644261 NF061F08EC1F1074 Elicited cell culture Medicago truncatula cDNA
clone NF061F08EC 5', mRNA sequence
Length = 682
Score = 137 bits (69), Expect = 1e-030
Identities = 144/169 (85%)
Strand = Plus / Plus
Query: 234 ttcgatcggcactgcaacatggttcttgagaacgttagggagatgtggaccgaggtaccg 293
|||||| |||||||||| ||||||||||| || |||||||| |||||||||||||| ||
Sbjct: 262 ttcgataggcactgcaatatggttcttgaaaatgttagggaaatgtggaccgaggttcca 321
Query: 294 aagaccggtaaaggcaagaagaaggctctcccggtgaacaaggacaggttcataagcaag 353
||||| |||||||| ||||| ||||||| || || ||||| || || |||||||||||
Sbjct: 322 aagactggtaaaggaaagaaaaaggctcagccagtaaacaaagatagattcataagcaaa 381
Query: 354 atgttcctccgtggggattcggtcatcattgtcctcaggaacccgaaat 402
||||| || ||||| ||||| ||||||||||| || |||||||| ||||
Sbjct: 382 atgtttcttcgtggagattctgtcatcattgttcttaggaaccccaaat 430
>gb|AW573942.1|AW573942 EST316533 GVN Medicago truncatula cDNA clone pGVN-49J6, mRNA
sequence
Length = 393
Score = 131 bits (66), Expect = 8e-029
Identities = 231/286 (80%)
Strand = Plus / Plus
Query: 117 gaggaagaggagttcagcaccggtcctctctcggtgctcatgatgagcgtcaagaataat 176
||||||||||| |||| ||| ||||| || || || ||||||||||| || || || ||
Sbjct: 86 gaggaagaggaattcaacactggtccactatctgtactcatgatgagtgtgaaaaacaac 145
Query: 177 acccaggttcttatcaactgccggaacaacaagaagttgcttggtcgcgtgcgagccttc 236
|| |||||||| ||||| || || |||||||| ||| | || || || || | || ||
Sbjct: 146 acacaggttctgatcaattgtcgtaacaacaaaaagcttctaggccgtgtcagggctttt 205
Query: 237 gatcggcactgcaacatggttcttgagaacgttagggagatgtggaccgaggtaccgaag 296
||| | |||||||| ||||||||||| || || |||| |||||||| ||||| || |||
Sbjct: 206 gatagacactgcaatatggttcttgaaaatgtccgggaaatgtggactgaggtgcctaag 265
Query: 297 accggtaaaggcaagaagaaggctctcccggtgaacaaggacaggttcataagcaagatg 356
||||||||||| ||||||||||||| || || |||||||| | ||||| ||||| |||
Sbjct: 266 accggtaaaggaaagaagaaggctcagccagtcaacaaggatcgtttcatcagcaaaatg 325
Query: 357 ttcctccgtggggattcggtcatcattgtcctcaggaacccgaaat 402
||||| ||||| ||||| ||||||||||| || |||||||| ||||
Sbjct: 326 ttccttcgtggagattctgtcatcattgttcttaggaaccccaaat 371
>gb|BF649434.1|BF649434 NF080B09EC1F1076 Elicited cell culture Medicago truncatula cDNA
clone NF080B09EC 5', mRNA sequence
Length = 656
Score = 131 bits (66), Expect = 8e-029
Identities = 231/286 (80%)
Strand = Plus / Plus
Query: 117 gaggaagaggagttcagcaccggtcctctctcggtgctcatgatgagcgtcaagaataat 176
||||||||||| |||| ||| ||||| || || || ||||||||||| || || || ||
Sbjct: 170 gaggaagaggaattcaacactggtccactatctgtactcatgatgagtgtgaaaaacaac 229
Query: 177 acccaggttcttatcaactgccggaacaacaagaagttgcttggtcgcgtgcgagccttc 236
|| |||||||| ||||| || || |||||||| ||| | || || || || | || ||
Sbjct: 230 acacaggttctgatcaattgtcgtaacaacaaaaagcttctaggccgtgtcagggctttt 289
Query: 237 gatcggcactgcaacatggttcttgagaacgttagggagatgtggaccgaggtaccgaag 296
||| | |||||||| ||||||||||| || || |||| |||||||| ||||| || |||
Sbjct: 290 gatagacactgcaatatggttcttgaaaatgtccgggaaatgtggactgaggtgcctaag 349
Query: 297 accggtaaaggcaagaagaaggctctcccggtgaacaaggacaggttcataagcaagatg 356
||||||||||| ||||||||||||| || || |||||||| | ||||| ||||| |||
Sbjct: 350 accggtaaaggaaagaagaaggctcagccagtcaacaaggatcgtttcatcagcaaaatg 409
Query: 357 ttcctccgtggggattcggtcatcattgtcctcaggaacccgaaat 402
||||| ||||| ||||| ||||||||||| || |||||||| ||||
Sbjct: 410 ttccttcgtggagattctgtcatcattgttcttaggaaccccaaat 455
>gb|BF650818.1|BF650818 NF097B10EC1F1079 Elicited cell culture Medicago truncatula cDNA
clone NF097B10EC 5', mRNA sequence
Length = 664
Score = 131 bits (66), Expect = 8e-029
Identities = 231/286 (80%)
Strand = Plus / Plus
Query: 117 gaggaagaggagttcagcaccggtcctctctcggtgctcatgatgagcgtcaagaataat 176
||||||||||| |||| ||| ||||| || || || ||||||||||| || || || ||
Sbjct: 163 gaggaagaggaattcaacactggtccactatctgtactcatgatgagtgtgaaaaacaac 222
Query: 177 acccaggttcttatcaactgccggaacaacaagaagttgcttggtcgcgtgcgagccttc 236
|| |||||||| ||||| || || |||||||| ||| | || || || || | || ||
Sbjct: 223 acacaggttctgatcaattgtcgtaacaacaaaaagcttctaggccgtgtcagggctttt 282
Query: 237 gatcggcactgcaacatggttcttgagaacgttagggagatgtggaccgaggtaccgaag 296
||| | |||||||| ||||||||||| || || |||| |||||||| ||||| || |||
Sbjct: 283 gatagacactgcaatatggttcttgaaaatgtccgggaaatgtggactgaggtgcctaag 342
Query: 297 accggtaaaggcaagaagaaggctctcccggtgaacaaggacaggttcataagcaagatg 356
||||||||||| ||||||||||||| || || |||||||| | ||||| ||||| |||
Sbjct: 343 accggtaaaggaaagaagaaggctcagccagtcaacaaggatcgtttcatcagcaaaatg 402
Query: 357 ttcctccgtggggattcggtcatcattgtcctcaggaacccgaaat 402
||||| ||||| ||||| ||||||||||| || |||||||| ||||
Sbjct: 403 ttccttcgtggagattctgtcatcattgttcttaggaaccccaaat 448
>gb|BI266739.1|BI266739 NF085B07IN1F1061 Insect herbivory Medicago truncatula cDNA clone
NF085B07IN 5', mRNA sequence
Length = 651
Score = 131 bits (66), Expect = 8e-029
Identities = 231/286 (80%)
Strand = Plus / Plus
Query: 117 gaggaagaggagttcagcaccggtcctctctcggtgctcatgatgagcgtcaagaataat 176
||||||||||| |||| ||| ||||| || || || ||||||||||| || || || ||
Sbjct: 175 gaggaagaggaattcaacactggtccactatctgtactcatgatgagtgtgaaaaacaac 234
Query: 177 acccaggttcttatcaactgccggaacaacaagaagttgcttggtcgcgtgcgagccttc 236
|| |||||||| ||||| || || |||||||| ||| | || || || || | || ||
Sbjct: 235 acacaggttctgatcaattgtcgtaacaacaaaaagcttctaggccgtgtcagggctttt 294
Query: 237 gatcggcactgcaacatggttcttgagaacgttagggagatgtggaccgaggtaccgaag 296
||| | |||||||| ||||||||||| || || |||| |||||||| ||||| || |||
Sbjct: 295 gatagacactgcaatatggttcttgaaaatgtccgggaaatgtggactgaggtgcctaag 354
Query: 297 accggtaaaggcaagaagaaggctctcccggtgaacaaggacaggttcataagcaagatg 356
||||||||||| ||||||||||||| || || |||||||| | ||||| ||||| |||
Sbjct: 355 accggtaaaggaaagaagaaggctcagccagtcaacaaggatcgtttcatcagcaaaatg 414
Query: 357 ttcctccgtggggattcggtcatcattgtcctcaggaacccgaaat 402
||||| ||||| ||||| ||||||||||| || |||||||| ||||
Sbjct: 415 ttccttcgtggagattctgtcatcattgttcttaggaaccccaaat 460
>gb|BM779378.1|BM779378 EST589954 KV2 Medicago truncatula cDNA clone pKV2-51F16, mRNA
sequence
Length = 544
Score = 131 bits (66), Expect = 8e-029
Identities = 231/286 (80%)
Strand = Plus / Plus
Query: 117 gaggaagaggagttcagcaccggtcctctctcggtgctcatgatgagcgtcaagaataat 176
||||||||||| |||| ||| ||||| || || || ||||||||||| || || || ||
Sbjct: 68 gaggaagaggaattcaacactggtccactatctgtactcatgatgagtgtgaaaaacaac 127
Query: 177 acccaggttcttatcaactgccggaacaacaagaagttgcttggtcgcgtgcgagccttc 236
|| |||||||| ||||| || || |||||||| ||| | || || || || | || ||
Sbjct: 128 acacaggttctgatcaattgtcgtaacaacaaaaagcttctaggccgtgtcagggctttt 187
Query: 237 gatcggcactgcaacatggttcttgagaacgttagggagatgtggaccgaggtaccgaag 296
||| | |||||||| ||||||||||| || || |||| |||||||| ||||| || |||
Sbjct: 188 gatagacactgcaatatggttcttgaaaatgtccgggaaatgtggactgaggtgcctaag 247
Query: 297 accggtaaaggcaagaagaaggctctcccggtgaacaaggacaggttcataagcaagatg 356
||||||||||| ||||||||||||| || || |||||||| | ||||| ||||| |||
Sbjct: 248 accggtaaaggaaagaagaaggctcagccagtcaacaaggatcgtttcatcagcaaaatg 307
Query: 357 ttcctccgtggggattcggtcatcattgtcctcaggaacccgaaat 402
||||| ||||| ||||| ||||||||||| || |||||||| ||||
Sbjct: 308 ttccttcgtggagattctgtcatcattgttcttaggaaccccaaat 353
>gb|AJ497473.1|AJ497473 AJ497473 MTFLOW Medicago truncatula cDNA clone mt--abc955109g05,
mRNA sequence
Length = 623
Score = 131 bits (66), Expect = 8e-029
Identities = 231/286 (80%)
Strand = Plus / Plus
Query: 117 gaggaagaggagttcagcaccggtcctctctcggtgctcatgatgagcgtcaagaataat 176
||||||||||| |||| ||| ||||| || || || ||||||||||| || || || ||
Sbjct: 75 gaggaagaggaattcaacactggtccactatctgtactcatgatgagtgtgaaaaacaac 134
Query: 177 acccaggttcttatcaactgccggaacaacaagaagttgcttggtcgcgtgcgagccttc 236
|| |||||||| ||||| || || |||||||| ||| | || || || || | || ||
Sbjct: 135 acacaggttctgatcaattgtcgtaacaacaaaaagcttctaggccgtgtcagggctttt 194
Query: 237 gatcggcactgcaacatggttcttgagaacgttagggagatgtggaccgaggtaccgaag 296
||| | |||||||| ||||||||||| || || |||| |||||||| ||||| || |||
Sbjct: 195 gatagacactgcaatatggttcttgaaaatgtccgggaaatgtggactgaggtgcctaag 254
Query: 297 accggtaaaggcaagaagaaggctctcccggtgaacaaggacaggttcataagcaagatg 356
||||||||||| ||||||||||||| || || |||||||| | ||||| ||||| |||
Sbjct: 255 accggtaaaggaaagaagaaggctcagccagtcaacaaggatcgtttcatcagcaaaatg 314
Query: 357 ttcctccgtggggattcggtcatcattgtcctcaggaacccgaaat 402
||||| ||||| ||||| ||||||||||| || |||||||| ||||
Sbjct: 315 ttccttcgtggagattctgtcatcattgttcttaggaaccccaaat 360
>gb|CX520933.1|CX520933 s13dNF59C06VI040_449652 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 522
Score = 131 bits (66), Expect = 8e-029
Identities = 231/286 (80%)
Strand = Plus / Plus
Query: 117 gaggaagaggagttcagcaccggtcctctctcggtgctcatgatgagcgtcaagaataat 176
||||||||||| |||| ||| ||||| || || || ||||||||||| || || || ||
Sbjct: 127 gaggaagaggaattcaacactggtccactatctgtactcatgatgagtgtgaaaaacaac 186
Query: 177 acccaggttcttatcaactgccggaacaacaagaagttgcttggtcgcgtgcgagccttc 236
|| |||||||| ||||| || || |||||||| ||| | || || || || | || ||
Sbjct: 187 acacaggttctgatcaattgtcgtaacaacaaaaagcttctaggccgtgtcagggctttt 246
Query: 237 gatcggcactgcaacatggttcttgagaacgttagggagatgtggaccgaggtaccgaag 296
||| | |||||||| ||||||||||| || || |||| |||||||| ||||| || |||
Sbjct: 247 gatagacactgcaatatggttcttgaaaatgtccgggaaatgtggactgaggtgcctaag 306
Query: 297 accggtaaaggcaagaagaaggctctcccggtgaacaaggacaggttcataagcaagatg 356
||||||||||| ||||||||||||| || || |||||||| | ||||| ||||| |||
Sbjct: 307 accggtaaaggaaagaagaaggctcagccagtcaacaaggatcgtttcatcagcaaaatg 366
Query: 357 ttcctccgtggggattcggtcatcattgtcctcaggaacccgaaat 402
||||| ||||| ||||| ||||||||||| || |||||||| ||||
Sbjct: 367 ttccttcgtggagattctgtcatcattgttcttaggaaccccaaat 412
>gb|DW016473.1|DW016473 EST1225434 MTY Medicago truncatula cDNA clone MTYAH63, mRNA
sequence
Length = 756
Score = 131 bits (66), Expect = 8e-029
Identities = 231/286 (80%)
Strand = Plus / Plus
Query: 117 gaggaagaggagttcagcaccggtcctctctcggtgctcatgatgagcgtcaagaataat 176
||||||||||| |||| ||| ||||| || || || ||||||||||| || || || ||
Sbjct: 154 gaggaagaggaattcaacactggtccactatctgtactcatgatgagtgtgaaaaacaac 213
Query: 177 acccaggttcttatcaactgccggaacaacaagaagttgcttggtcgcgtgcgagccttc 236
|| |||||||| ||||| || || |||||||| ||| | || || || || | || ||
Sbjct: 214 acacaggttctgatcaattgtcgtaacaacaaaaagcttctaggccgtgtcagggctttt 273
Query: 237 gatcggcactgcaacatggttcttgagaacgttagggagatgtggaccgaggtaccgaag 296
||| | |||||||| ||||||||||| || || |||| |||||||| ||||| || |||
Sbjct: 274 gatagacactgcaatatggttcttgaaaatgtccgggaaatgtggactgaggtgcctaag 333
Query: 297 accggtaaaggcaagaagaaggctctcccggtgaacaaggacaggttcataagcaagatg 356
||||||||||| ||||||||||||| || || |||||||| | ||||| ||||| |||
Sbjct: 334 accggtaaaggaaagaagaaggctcagccagtcaacaaggatcgtttcatcagcaaaatg 393
Query: 357 ttcctccgtggggattcggtcatcattgtcctcaggaacccgaaat 402
||||| ||||| ||||| ||||||||||| || |||||||| ||||
Sbjct: 394 ttccttcgtggagattctgtcatcattgttcttaggaaccccaaat 439
>gb|AL376211.1|AL376211 MtBB22A12F1 MtBB Medicago truncatula cDNA clone MtBB22A12 T3, mRNA
sequence
Length = 464
Score = 119 bits (60), Expect = 3e-025
Identities = 135/160 (84%)
Strand = Plus / Plus
Query: 243 cactgcaacatggttcttgagaacgttagggagatgtggaccgaggtaccgaagaccggt 302
|||||||| ||||||||||| || || |||| |||||||| ||||| || |||||||||
Sbjct: 95 cactgcaatatggttcttgaaaatgtccgggaaatgtggactgaggtgcctaagaccggt 154
Query: 303 aaaggcaagaagaaggctctcccggtgaacaaggacaggttcataagcaagatgttcctc 362
||||| ||||||||||||| || || |||||||| | ||||| ||||| ||||||||
Sbjct: 155 aaaggaaagaagaaggctcagccagtcaacaaggatcgtttcatcagcaaaatgttcctt 214
Query: 363 cgtggggattcggtcatcattgtcctcaggaacccgaaat 402
||||| ||||| ||||||||||| || |||||||| ||||
Sbjct: 215 cgtggagattctgtcatcattgttcttaggaaccccaaat 254
>gb|BG455780.1|BG455780 NF067D09PL1F1076 Phosphate starved leaf Medicago truncatula cDNA
clone NF067D09PL 5', mRNA sequence
Length = 683
Score = 119 bits (60), Expect = 3e-025
Identities = 224/279 (80%)
Strand = Plus / Plus
Query: 117 gaggaagaggagttcagcaccggtcctctctcggtgctcatgatgagcgtcaagaataat 176
||||||||||| |||| ||| ||||| || || || ||||||||||| || || || ||
Sbjct: 117 gaggaagaggaattcaacactggtccactatctgtactcatgatgagtgtgaaaaacaac 176
Query: 177 acccaggttcttatcaactgccggaacaacaagaagttgcttggtcgcgtgcgagccttc 236
|| |||||||| ||||| || || |||||||| ||| | || || || || | || ||
Sbjct: 177 acacaggttctgatcaattgtcgtaacaacaaaaagcttctaggccgtgtcagggctttt 236
Query: 237 gatcggcactgcaacatggttcttgagaacgttagggagatgtggaccgaggtaccgaag 296
||| | |||||||| ||||||||||| || || |||| |||||||| ||||| || |||
Sbjct: 237 gatagacactgcaatatggttcttgaaaatgtccgggaaatgtggactgaggtgcctaag 296
Query: 297 accggtaaaggcaagaagaaggctctcccggtgaacaaggacaggttcataagcaagatg 356
||||||||||| ||||||||||||| || || |||||||| | |||| ||||| |||
Sbjct: 297 accggtaaaggaaagaagaaggctcagccagtcaacaaggatcgtntcatcagcaaaatg 356
Query: 357 ttcctccgtggggattcggtcatcattgtcctcaggaac 395
||||| ||||| ||||| ||||||||||| || ||||||
Sbjct: 357 ttccttcgtggagattctgtcatcattgttcttaggaac 395
>gb|AJ847442.1|AJ847442 AJ847442 MtSTA Medicago truncatula cDNA clone MtTA01H10S6, mRNA
sequence
Length = 468
Score = 119 bits (60), Expect = 3e-025
Identities = 135/160 (84%)
Strand = Plus / Plus
Query: 243 cactgcaacatggttcttgagaacgttagggagatgtggaccgaggtaccgaagaccggt 302
|||||||| ||||||||||| || || |||| |||||||| ||||| || |||||||||
Sbjct: 104 cactgcaatatggttcttgaaaatgtccgggaaatgtggactgaggtgcctaagaccggt 163
Query: 303 aaaggcaagaagaaggctctcccggtgaacaaggacaggttcataagcaagatgttcctc 362
||||| ||||||||||||| || || |||||||| | ||||| ||||| ||||||||
Sbjct: 164 aaaggaaagaagaaggctcagccagtcaacaaggatcgtttcatcagcaaaatgttcctt 223
Query: 363 cgtggggattcggtcatcattgtcctcaggaacccgaaat 402
||||| ||||| ||||||||||| || |||||||| ||||
Sbjct: 224 cgtggagattctgtcatcattgttcttaggaaccccaaat 263
>gb|BG648003.1|BG648003 EST509622 HOGA Medicago truncatula cDNA clone pHOGA-18D13 5' end,
mRNA sequence
Length = 508
Score = 111 bits (56), Expect = 8e-023
Identities = 134/160 (83%)
Strand = Plus / Plus
Query: 243 cactgcaacatggttcttgagaacgttagggagatgtggaccgaggtaccgaagaccggt 302
|||||||| ||||||||||| || || |||| |||||||| ||||| || |||||||||
Sbjct: 72 cactgcaatatggttcttgaaaatgtccgggaaatgtggactgaggtgcctaagaccggt 131
Query: 303 aaaggcaagaagaaggctctcccggtgaacaaggacaggttcataagcaagatgttcctc 362
||||| ||||||||||||| || || |||||||| | ||||| ||||| ||||||||
Sbjct: 132 aaaggaaagaagaaggctcagccagtcaacaaggatcgtttcatcagcaaaatgttcctt 191
Query: 363 cgtggggattcggtcatcattgtcctcaggaacccgaaat 402
||||| ||||| ||||||||||| || |||| ||| ||||
Sbjct: 192 cgtggagattctgtcatcattgttcttaggagccccaaat 231
>gb|DW018764.1|DW018764 EST1227725 MTY Medicago truncatula cDNA clone MTYBA66, mRNA
sequence
Length = 754
Score = 101 bits (51), Expect = 7e-020
Identities = 228/286 (79%), Gaps = 2/286 (0%)
Strand = Plus / Plus
Query: 117 gaggaagaggagttcagcaccggtcctctctcggtgctcatgatgagcgtcaagaataat 176
||||||||||| |||| ||| ||||| || || || ||||||| ||| || || || ||
Sbjct: 147 gaggaagaggaattcaacactggtccactatctgtactcatgaggagtgtgaaaaacaac 206
Query: 177 acccaggttcttatcaactgccggaacaacaagaagttgcttggtcgcgtgcgagccttc 236
|| |||||||| ||||| || || |||||||| ||| | || || || || | || ||
Sbjct: 207 acacaggttctgatcaattgtcgtaacaacaaaaagcttctaggccgtgtcagggctttt 266
Query: 237 gatcggcactgcaacatggttcttgagaacgttagggagatgtggaccgaggtaccgaag 296
||| | |||||||| ||||| ||||| || || |||| |||||||| ||||| || |||
Sbjct: 267 gatagacactgcaatatggtccttgaaaatgtccgggaaatgtggactgaggtgcctaag 326
Query: 297 accggtaaaggcaagaagaaggctctcccggtgaacaaggacaggttcataagcaagatg 356
||||||||||| ||||||||||||| || || |||||||| | ||||| |||| |||
Sbjct: 327 accggtaaaggaaagaagaaggctcagccagtcaacaaggatcgtttcatcagca--atg 384
Query: 357 ttcctccgtggggattcggtcatcattgtcctcaggaacccgaaat 402
||||| ||||| ||||| ||||||||||| || |||||||| ||||
Sbjct: 385 ttccttcgtggagattctgtcatcattgttcttaggaaccccaaat 430
>gb|CX538446.1|CX538446 s13dNF79E01GS003_460144 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 365
Score = 97.6 bits (49), Expect = 1e-018
Identities = 196/245 (80%)
Strand = Plus / Plus
Query: 117 gaggaagaggagttcagcaccggtcctctctcggtgctcatgatgagcgtcaagaataat 176
||||||||||| |||| ||| ||||| || || || ||||||||||| || || || ||
Sbjct: 120 gaggaagaggaattcaacactggtccactatctgtactcatgatgagtgtgaaaaacaac 179
Query: 177 acccaggttcttatcaactgccggaacaacaagaagttgcttggtcgcgtgcgagccttc 236
|| |||||||| ||||| || || |||||||| ||| | || || || || | || ||
Sbjct: 180 acacaggttctgatcaattgtcgtaacaacaaaaagcttctaggccgtgtcagggctttt 239
Query: 237 gatcggcactgcaacatggttcttgagaacgttagggagatgtggaccgaggtaccgaag 296
||| | |||||||| ||||||||||| || || |||| |||||||| ||||| || |||
Sbjct: 240 gatagacactgcaatatggttcttgaaaatgtccgggaaatgtggactgaggtgcctaag 299
Query: 297 accggtaaaggcaagaagaaggctctcccggtgaacaaggacaggttcataagcaagatg 356
||||||||||| ||||||||||||| || || |||||||| | ||||| ||||| |||
Sbjct: 300 accggtaaaggaaagaagaaggctcagccagtcaacaaggatcgtttcatcagcaaaatg 359
Query: 357 ttcct 361
|||||
Sbjct: 360 ttcct 364
>gb|AC153350.13| Medicago truncatula clone mth2-77l10, WORKING DRAFT SEQUENCE, 4 ordered
pieces
Length = 110967
Score = 89.7 bits (45), Expect = 3e-016
Identities = 93/109 (85%)
Strand = Plus / Minus
Query: 294 aagaccggtaaaggcaagaagaaggctctcccggtgaacaaggacaggttcataagcaag 353
|||||||||||||| ||||||||||||| || || |||||||| | ||||| |||||
Sbjct: 99609 aagaccggtaaaggaaagaagaaggctcagccagtcaacaaggatcgtttcatcagcaaa 99550
Query: 354 atgttcctccgtggggattcggtcatcattgtcctcaggaacccgaaat 402
|||||||| ||||| ||||| ||||||||||| || |||||||| ||||
Sbjct: 99549 atgttccttcgtggagattctgtcatcattgttcttaggaaccccaaat 99501
Score = 40.1 bits (20), Expect = 0.24
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 243 cactgcaacatggttcttgagaacgttagggagatgtggaccgaggta 290
|||||||| ||||||||||| || || |||| |||||||| ||||||
Sbjct: 99762 cactgcaatatggttcttgaaaatgtccgggaaatgtggactgaggta 99715
>gb|BI272395.1|BI272395 NF020H02FL1F1027 Developing flower Medicago truncatula cDNA clone
NF020H02FL 5', mRNA sequence
Length = 354
Score = 67.9 bits (34), Expect = 1e-009
Identities = 150/189 (79%)
Strand = Plus / Plus
Query: 117 gaggaagaggagttcagcaccggtcctctctcggtgctcatgatgagcgtcaagaataat 176
||||||||||| |||| ||| ||||| || || || ||||||||||| || || || ||
Sbjct: 166 gaggaagaggaattcaacactggtccactatctgtactcatgatgagtgtgaaaaacaac 225
Query: 177 acccaggttcttatcaactgccggaacaacaagaagttgcttggtcgcgtgcgagccttc 236
|| |||||||| ||||| || || |||||||| ||| | || || || || | || ||
Sbjct: 226 acacaggttctgatcaattgncgtaacaacaaaaagcttctaggccgtgtcagggctttt 285
Query: 237 gatcggcactgcaacatggttcttgagaacgttagggagatgtggaccgaggtaccgaag 296
||| | |||||||| ||||||||||| || || |||| |||||||| ||||| || |||
Sbjct: 286 gatagacactgcaatatggttcttgaaaatgtccgggaaatgtggactgaggtgcctaag 345
Query: 297 accggtaaa 305
|||||||||
Sbjct: 346 accggtaaa 354
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 117,210
Number of Sequences: 392609
Number of extensions: 117210
Number of successful extensions: 8402
Number of sequences better than 0.5: 17
Number of HSP's better than 0.5 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8367
Number of HSP's gapped (non-prelim): 34
length of query: 675
length of database: 441,732,993
effective HSP length: 19
effective length of query: 656
effective length of database: 434,273,422
effective search space: 284883364832
effective search space used: 284883364832
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)