BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2950089.2.3
(824 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AJ499470.1|AJ499470 AJ499470 MTGIM Medicago truncatula c... 50 3e-004
gb|AJ500111.1|AJ500111 AJ500111 MTGIM Medicago truncatula c... 48 0.001
gb|AJ500539.1|AJ500539 AJ500539 MTGIM Medicago truncatula c... 48 0.001
gb|AW687624.2|AW687624 NF011F05RT1F1046 Developing root Med... 46 0.005
gb|AJ497137.1|AJ497137 AJ497137 MTFLOW Medicago truncatula ... 46 0.005
gb|CA917721.1|CA917721 EST641868 GPOD Medicago truncatula c... 46 0.005
gb|CX521899.1|CX521899 s13dNF1FE12VI099_469602 Virus-Infect... 46 0.005
gb|CX523689.1|CX523689 s13dNF02G07AT054_322762 Aphid-Infect... 46 0.005
gb|CX539846.1|CX539846 s13dNF0HH01GS012_462964 Germinating ... 46 0.005
gb|AJ500185.1|AJ500185 AJ500185 MTGIM Medicago truncatula c... 44 0.018
gb|AJ500456.1|AJ500456 AJ500456 MTGIM Medicago truncatula c... 44 0.018
gb|AJ499175.1|AJ499175 AJ499175 MTGIM Medicago truncatula c... 44 0.018
gb|AJ547991.1|AJ547991 AJ547991 MTAPHEU Medicago truncatula... 44 0.018
gb|AJ846468.1|AJ846468 AJ846468 MtSCF Medicago truncatula c... 44 0.018
gb|BI310113.1|BI310113 EST5311863 GESD Medicago truncatula ... 42 0.073
gb|AJ500088.1|AJ500088 AJ500088 MTGIM Medicago truncatula c... 42 0.073
gb|AJ500181.1|AJ500181 AJ500181 MTGIM Medicago truncatula c... 42 0.073
gb|AJ500823.1|AJ500823 AJ500823 MTGIM Medicago truncatula c... 42 0.073
gb|AJ499522.1|AJ499522 AJ499522 MTGIM Medicago truncatula c... 42 0.073
gb|AJ499618.1|AJ499618 AJ499618 MTGIM Medicago truncatula c... 42 0.073
gb|AJ499688.1|AJ499688 AJ499688 MTGIM Medicago truncatula c... 42 0.073
gb|AJ548370.1|AJ548370 AJ548370 MTAPHEU Medicago truncatula... 42 0.073
gb|AJ846298.1|AJ846298 AJ846298 MtSCF Medicago truncatula c... 42 0.073
gb|AJ846302.1|AJ846302 AJ846302 MtSCF Medicago truncatula c... 42 0.073
gb|AJ846340.1|AJ846340 AJ846340 MtSCF Medicago truncatula c... 42 0.073
gb|AJ846354.1|AJ846354 AJ846354 MtSCF Medicago truncatula c... 42 0.073
gb|AJ846390.1|AJ846390 AJ846390 MtSCF Medicago truncatula c... 42 0.073
gb|AJ846446.1|AJ846446 AJ846446 MtSCF Medicago truncatula c... 42 0.073
gb|AJ846716.1|AJ846716 AJ846716 MtSN0 Medicago truncatula c... 42 0.073
gb|AJ848580.1|AJ848580 AJ848580 MtSN4 Medicago truncatula c... 42 0.073
gb|DW017475.1|DW017475 EST1226436 MTY Medicago truncatula c... 42 0.073
gb|AJ500109.1|AJ500109 AJ500109 MTGIM Medicago truncatula c... 40 0.29
gb|AJ500217.1|AJ500217 AJ500217 MTGIM Medicago truncatula c... 40 0.29
gb|AJ500301.1|AJ500301 AJ500301 MTGIM Medicago truncatula c... 40 0.29
gb|AJ500566.1|AJ500566 AJ500566 MTGIM Medicago truncatula c... 40 0.29
gb|AJ500595.1|AJ500595 AJ500595 MTGIM Medicago truncatula c... 40 0.29
gb|AJ500711.1|AJ500711 AJ500711 MTGIM Medicago truncatula c... 40 0.29
gb|AJ548142.1|AJ548142 AJ548142 MTAPHEU Medicago truncatula... 40 0.29
gb|AJ548170.1|AJ548170 AJ548170 MTAPHEU Medicago truncatula... 40 0.29
gb|AJ845902.1|AJ845902 AJ845902 MtSNF Medicago truncatula c... 40 0.29
gb|AJ846304.1|AJ846304 AJ846304 MtSCF Medicago truncatula c... 40 0.29
gb|AJ846328.1|AJ846328 AJ846328 MtSCF Medicago truncatula c... 40 0.29
gb|AJ846329.1|AJ846329 AJ846329 MtSCF Medicago truncatula c... 40 0.29
gb|AJ846333.1|AJ846333 AJ846333 MtSCF Medicago truncatula c... 40 0.29
gb|AJ846353.1|AJ846353 AJ846353 MtSCF Medicago truncatula c... 40 0.29
gb|AJ846376.1|AJ846376 AJ846376 MtSCF Medicago truncatula c... 40 0.29
gb|AJ846383.1|AJ846383 AJ846383 MtSCF Medicago truncatula c... 40 0.29
gb|AJ846429.1|AJ846429 AJ846429 MtSCF Medicago truncatula c... 40 0.29
gb|AJ846448.1|AJ846448 AJ846448 MtSCF Medicago truncatula c... 40 0.29
gb|AJ846460.1|AJ846460 AJ846460 MtSCF Medicago truncatula c... 40 0.29
gb|AJ846496.1|AJ846496 AJ846496 MtSCF Medicago truncatula c... 40 0.29
gb|AJ846528.1|AJ846528 AJ846528 MtSCF Medicago truncatula c... 40 0.29
gb|AJ846544.1|AJ846544 AJ846544 MtSCF Medicago truncatula c... 40 0.29
gb|AJ846557.1|AJ846557 AJ846557 MtSCF Medicago truncatula c... 40 0.29
gb|AJ846559.1|AJ846559 AJ846559 MtSCF Medicago truncatula c... 40 0.29
gb|AJ846625.1|AJ846625 AJ846625 MtSN0 Medicago truncatula c... 40 0.29
gb|AJ846631.1|AJ846631 AJ846631 MtSN0 Medicago truncatula c... 40 0.29
gb|AJ846671.1|AJ846671 AJ846671 MtSN0 Medicago truncatula c... 40 0.29
gb|AJ846685.1|AJ846685 AJ846685 MtSN0 Medicago truncatula c... 40 0.29
gb|AJ846691.1|AJ846691 AJ846691 MtSN0 Medicago truncatula c... 40 0.29
gb|AJ846699.1|AJ846699 AJ846699 MtSN0 Medicago truncatula c... 40 0.29
gb|AJ846707.1|AJ846707 AJ846707 MtSN0 Medicago truncatula c... 40 0.29
gb|AJ846710.1|AJ846710 AJ846710 MtSN0 Medicago truncatula c... 40 0.29
gb|AJ846729.1|AJ846729 AJ846729 MtSN0 Medicago truncatula c... 40 0.29
gb|AJ846750.1|AJ846750 AJ846750 MtSN0 Medicago truncatula c... 40 0.29
gb|AJ846760.1|AJ846760 AJ846760 MtSN0 Medicago truncatula c... 40 0.29
gb|AJ846778.1|AJ846778 AJ846778 MtSN0 Medicago truncatula c... 40 0.29
gb|AJ846792.1|AJ846792 AJ846792 MtSN0 Medicago truncatula c... 40 0.29
gb|AJ846797.1|AJ846797 AJ846797 MtSN0 Medicago truncatula c... 40 0.29
gb|AJ846812.1|AJ846812 AJ846812 MtSN0 Medicago truncatula c... 40 0.29
gb|AJ846834.1|AJ846834 AJ846834 MtSN0 Medicago truncatula c... 40 0.29
gb|AJ848660.1|AJ848660 AJ848660 MtSN4 Medicago truncatula c... 40 0.29
gb|AJ621860.1|AJ621860 AJ621860 Medicago truncatula J5 root... 40 0.29
gb|AJ864417.1|AJ864417 AJ864417 Medicago truncatula cv. J5 ... 40 0.29
>gb|AJ499470.1|AJ499470 AJ499470 MTGIM Medicago truncatula cDNA clone mtgmacc120004f05,
mRNA sequence
Length = 128
Score = 50.1 bits (25), Expect = 3e-004
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 799 ccccgcgtacctgcccgggcggccg 823
|||||||||||||||||||||||||
Sbjct: 30 ccccgcgtacctgcccgggcggccg 6
>gb|AJ500111.1|AJ500111 AJ500111 MTGIM Medicago truncatula cDNA clone mtgmacc120012g12,
mRNA sequence
Length = 398
Score = 48.1 bits (24), Expect = 0.001
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 800 cccgcgtacctgcccgggcggccg 823
||||||||||||||||||||||||
Sbjct: 374 cccgcgtacctgcccgggcggccg 397
>gb|AJ500539.1|AJ500539 AJ500539 MTGIM Medicago truncatula cDNA clone mtgmacc120017e07,
mRNA sequence
Length = 489
Score = 48.1 bits (24), Expect = 0.001
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 800 cccgcgtacctgcccgggcggccg 823
||||||||||||||||||||||||
Sbjct: 27 cccgcgtacctgcccgggcggccg 4
>gb|AW687624.2|AW687624 NF011F05RT1F1046 Developing root Medicago truncatula cDNA clone
NF011F05RT 5', mRNA sequence
Length = 476
Score = 46.1 bits (23), Expect = 0.005
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 434 agccactgctgatcatctacaggattttttgtctctatagctctaacagaagcatataga 493
|||||||| |||||||| |||||| || |||| || || ||||| ||||||||||||
Sbjct: 252 agccactgttgatcatccacaggagacttgctctcaattgccctaactgaagcatataga 193
Query: 494 ggataagcaag 504
|||||| ||||
Sbjct: 192 ggataaacaag 182
>gb|AJ497137.1|AJ497137 AJ497137 MTFLOW Medicago truncatula cDNA clone mt--abc955105a12,
mRNA sequence
Length = 377
Score = 46.1 bits (23), Expect = 0.005
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 434 agccactgctgatcatctacaggattttttgtctctatagctctaacagaagcatataga 493
|||||||| |||||||| |||||| || |||| || || ||||| ||||||||||||
Sbjct: 234 agccactgttgatcatccacaggagacttgctctcaattgccctaactgaagcatataga 175
Query: 494 ggataagcaag 504
|||||| ||||
Sbjct: 174 ggataaacaag 164
>gb|CA917721.1|CA917721 EST641868 GPOD Medicago truncatula cDNA clone GPOD-37E21, mRNA
sequence
Length = 701
Score = 46.1 bits (23), Expect = 0.005
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 434 agccactgctgatcatctacaggattttttgtctctatagctctaacagaagcatataga 493
|||||||| |||||||| |||||| || |||| || || ||||| ||||||||||||
Sbjct: 228 agccactgttgatcatccacaggagacttgctctcaattgccctaactgaagcatataga 169
Query: 494 ggataagcaag 504
|||||| ||||
Sbjct: 168 ggataaacaag 158
>gb|CX521899.1|CX521899 s13dNF1FE12VI099_469602 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 614
Score = 46.1 bits (23), Expect = 0.005
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 434 agccactgctgatcatctacaggattttttgtctctatagctctaacagaagcatataga 493
|||||||| |||||||| |||||| || |||| || || ||||| ||||||||||||
Sbjct: 261 agccactgttgatcatccacaggagacttgctctcaattgccctaactgaagcatataga 202
Query: 494 ggataagcaag 504
|||||| ||||
Sbjct: 201 ggataaacaag 191
>gb|CX523689.1|CX523689 s13dNF02G07AT054_322762 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 692
Score = 46.1 bits (23), Expect = 0.005
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 434 agccactgctgatcatctacaggattttttgtctctatagctctaacagaagcatataga 493
|||||||| |||||||| |||||| || |||| || || ||||| ||||||||||||
Sbjct: 336 agccactgttgatcatccacaggagacttgctctcaattgccctaactgaagcatataga 277
Query: 494 ggataagcaag 504
|||||| ||||
Sbjct: 276 ggataaacaag 266
>gb|CX539846.1|CX539846 s13dNF0HH01GS012_462964 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 392
Score = 46.1 bits (23), Expect = 0.005
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 434 agccactgctgatcatctacaggattttttgtctctatagctctaacagaagcatataga 493
|||||||| |||||||| |||||| || |||| || || ||||| ||||||||||||
Sbjct: 232 agccactgttgatcatccacaggagacttgctctcaattgccctaactgaagcatataga 173
Query: 494 ggataagcaag 504
|||||| ||||
Sbjct: 172 ggataaacaag 162
>gb|AJ500185.1|AJ500185 AJ500185 MTGIM Medicago truncatula cDNA clone mtgmacc120013f07,
mRNA sequence
Length = 557
Score = 44.1 bits (22), Expect = 0.018
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 799 ccccgcgtacctgcccgggcggccgc 824
|||||||||||||||||||| |||||
Sbjct: 30 ccccgcgtacctgcccgggcagccgc 5
>gb|AJ500456.1|AJ500456 AJ500456 MTGIM Medicago truncatula cDNA clone mtgmacc120016f01,
mRNA sequence
Length = 310
Score = 44.1 bits (22), Expect = 0.018
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 800 cccgcgtacctgcccgggcggc 821
||||||||||||||||||||||
Sbjct: 289 cccgcgtacctgcccgggcggc 310
>gb|AJ499175.1|AJ499175 AJ499175 MTGIM Medicago truncatula cDNA clone mtgmacc120001a07,
mRNA sequence
Length = 366
Score = 44.1 bits (22), Expect = 0.018
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 800 cccgcgtacctgcccgggcggccgc 824
||||||||||||||||||||| |||
Sbjct: 337 cccgcgtacctgcccgggcggncgc 361
>gb|AJ547991.1|AJ547991 AJ547991 MTAPHEU Medicago truncatula cDNA clone mtaehac110005g06,
mRNA sequence
Length = 590
Score = 44.1 bits (22), Expect = 0.018
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 798 cccccgcgtacctgcccgggcg 819
||||||||||||||||||||||
Sbjct: 569 cccccgcgtacctgcccgggcg 590
>gb|AJ846468.1|AJ846468 AJ846468 MtSCF Medicago truncatula cDNA clone MtCF04E10S6, mRNA
sequence
Length = 650
Score = 44.1 bits (22), Expect = 0.018
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 797 tcccccgcgtacctgcccgggc 818
||||||||||||||||||||||
Sbjct: 22 tcccccgcgtacctgcccgggc 1
>gb|BI310113.1|BI310113 EST5311863 GESD Medicago truncatula cDNA clone pGESD7K13 5' end,
mRNA sequence
Length = 528
Score = 42.1 bits (21), Expect = 0.073
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 476 ctaacagaagcatatagaggataagcaag 504
||||| |||||||||||||||||| ||||
Sbjct: 88 ctaactgaagcatatagaggataaacaag 60
>gb|AJ500088.1|AJ500088 AJ500088 MTGIM Medicago truncatula cDNA clone mtgmacc120012e05,
mRNA sequence
Length = 114
Score = 42.1 bits (21), Expect = 0.073
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 800 cccgcgtacctgcccgggcggccgc 824
|||||||||||||||||||| ||||
Sbjct: 29 cccgcgtacctgcccgggcgcccgc 5
>gb|AJ500181.1|AJ500181 AJ500181 MTGIM Medicago truncatula cDNA clone mtgmacc120013f03,
mRNA sequence
Length = 614
Score = 42.1 bits (21), Expect = 0.073
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 804 cgtacctgcccgggcggccgc 824
|||||||||||||||||||||
Sbjct: 203 cgtacctgcccgggcggccgc 223
>gb|AJ500823.1|AJ500823 AJ500823 MTGIM Medicago truncatula cDNA clone mtgmacc120020f01,
mRNA sequence
Length = 605
Score = 42.1 bits (21), Expect = 0.073
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 799 ccccgcgtacctgcccgggcg 819
|||||||||||||||||||||
Sbjct: 21 ccccgcgtacctgcccgggcg 1
>gb|AJ499522.1|AJ499522 AJ499522 MTGIM Medicago truncatula cDNA clone mtgmacc120005c05,
mRNA sequence
Length = 469
Score = 42.1 bits (21), Expect = 0.073
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 799 ccccgcgtacctgcccgggcg 819
|||||||||||||||||||||
Sbjct: 29 ccccgcgtacctgcccgggcg 9
>gb|AJ499618.1|AJ499618 AJ499618 MTGIM Medicago truncatula cDNA clone mtgmacc120006d04,
mRNA sequence
Length = 173
Score = 42.1 bits (21), Expect = 0.073
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 799 ccccgcgtacctgcccgggcg 819
|||||||||||||||||||||
Sbjct: 29 ccccgcgtacctgcccgggcg 9
>gb|AJ499688.1|AJ499688 AJ499688 MTGIM Medicago truncatula cDNA clone mtgmacc120007c09,
mRNA sequence
Length = 335
Score = 42.1 bits (21), Expect = 0.073
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 799 ccccgcgtacctgcccgggcg 819
|||||||||||||||||||||
Sbjct: 29 ccccgcgtacctgcccgggcg 9
>gb|AJ548370.1|AJ548370 AJ548370 MTAPHEU Medicago truncatula cDNA clone mtaehac110006h05,
mRNA sequence
Length = 518
Score = 42.1 bits (21), Expect = 0.073
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 799 ccccgcgtacctgcccgggcg 819
|||||||||||||||||||||
Sbjct: 498 ccccgcgtacctgcccgggcg 518
>gb|AJ846298.1|AJ846298 AJ846298 MtSCF Medicago truncatula cDNA clone MtCF01B12S6, mRNA
sequence
Length = 775
Score = 42.1 bits (21), Expect = 0.073
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 798 cccccgcgtacctgcccgggc 818
|||||||||||||||||||||
Sbjct: 21 cccccgcgtacctgcccgggc 1
>gb|AJ846302.1|AJ846302 AJ846302 MtSCF Medicago truncatula cDNA clone MtCF01B18S6, mRNA
sequence
Length = 476
Score = 42.1 bits (21), Expect = 0.073
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 798 cccccgcgtacctgcccgggc 818
|||||||||||||||||||||
Sbjct: 21 cccccgcgtacctgcccgggc 1
>gb|AJ846340.1|AJ846340 AJ846340 MtSCF Medicago truncatula cDNA clone MtCF01J22S6, mRNA
sequence
Length = 688
Score = 42.1 bits (21), Expect = 0.073
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 798 cccccgcgtacctgcccgggc 818
|||||||||||||||||||||
Sbjct: 21 cccccgcgtacctgcccgggc 1
>gb|AJ846354.1|AJ846354 AJ846354 MtSCF Medicago truncatula cDNA clone MtCF01N04S6, mRNA
sequence
Length = 418
Score = 42.1 bits (21), Expect = 0.073
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 798 cccccgcgtacctgcccgggc 818
|||||||||||||||||||||
Sbjct: 21 cccccgcgtacctgcccgggc 1
>gb|AJ846390.1|AJ846390 AJ846390 MtSCF Medicago truncatula cDNA clone MtCF02E09S6, mRNA
sequence
Length = 272
Score = 42.1 bits (21), Expect = 0.073
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 798 cccccgcgtacctgcccgggc 818
|||||||||||||||||||||
Sbjct: 21 cccccgcgtacctgcccgggc 1
>gb|AJ846446.1|AJ846446 AJ846446 MtSCF Medicago truncatula cDNA clone MtCF02O17S6, mRNA
sequence
Length = 710
Score = 42.1 bits (21), Expect = 0.073
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 798 cccccgcgtacctgcccgggc 818
|||||||||||||||||||||
Sbjct: 21 cccccgcgtacctgcccgggc 1
>gb|AJ846716.1|AJ846716 AJ846716 MtSN0 Medicago truncatula cDNA clone MtN004H17S6, mRNA
sequence
Length = 163
Score = 42.1 bits (21), Expect = 0.073
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 798 cccccgcgtacctgcccgggc 818
|||||||||||||||||||||
Sbjct: 21 cccccgcgtacctgcccgggc 1
>gb|AJ848580.1|AJ848580 AJ848580 MtSN4 Medicago truncatula cDNA clone MtN409E05N2, mRNA
sequence
Length = 93
Score = 42.1 bits (21), Expect = 0.073
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 798 cccccgcgtacctgcccgggc 818
|||||||||||||||||||||
Sbjct: 73 cccccgcgtacctgcccgggc 93
>gb|DW017475.1|DW017475 EST1226436 MTY Medicago truncatula cDNA clone MTYAU11, mRNA
sequence
Length = 795
Score = 42.1 bits (21), Expect = 0.073
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 476 ctaacagaagcatatagaggataagcaag 504
||||| |||||||||||||||||| ||||
Sbjct: 230 ctaactgaagcatatagaggataaacaag 202
>gb|AJ500109.1|AJ500109 AJ500109 MTGIM Medicago truncatula cDNA clone mtgmacc120012g10,
mRNA sequence
Length = 549
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 797 tcccccgcgtacctgcccgg 816
||||||||||||||||||||
Sbjct: 31 tcccccgcgtacctgcccgg 12
>gb|AJ500217.1|AJ500217 AJ500217 MTGIM Medicago truncatula cDNA clone mtgmacc120014a04,
mRNA sequence
Length = 458
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 805 gtacctgcccgggcggccgc 824
||||||||||||||||||||
Sbjct: 300 gtacctgcccgggcggccgc 319
>gb|AJ500301.1|AJ500301 AJ500301 MTGIM Medicago truncatula cDNA clone mtgmacc120014h08,
mRNA sequence
Length = 164
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 805 gtacctgcccgggcggccgc 824
||||||||||||||||||||
Sbjct: 45 gtacctgcccgggcggccgc 26
>gb|AJ500566.1|AJ500566 AJ500566 MTGIM Medicago truncatula cDNA clone mtgmacc120017g10,
mRNA sequence
Length = 406
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 805 gtacctgcccgggcggccgc 824
||||||||||||||||||||
Sbjct: 290 gtacctgcccgggcggccgc 309
>gb|AJ500595.1|AJ500595 AJ500595 MTGIM Medicago truncatula cDNA clone mtgmacc120018b05,
mRNA sequence
Length = 381
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 800 cccgcgtacctgcccgggcg 819
||||||||||||||||||||
Sbjct: 28 cccgcgtacctgcccgggcg 9
>gb|AJ500711.1|AJ500711 AJ500711 MTGIM Medicago truncatula cDNA clone mtgmacc120019d05,
mRNA sequence
Length = 591
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 805 gtacctgcccgggcggccgc 824
||||||||||||||||||||
Sbjct: 339 gtacctgcccgggcggccgc 320
>gb|AJ548142.1|AJ548142 AJ548142 MTAPHEU Medicago truncatula cDNA clone mtaehac110001e06,
mRNA sequence
Length = 78
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 800 cccgcgtacctgcccgggcg 819
||||||||||||||||||||
Sbjct: 41 cccgcgtacctgcccgggcg 22
>gb|AJ548170.1|AJ548170 AJ548170 MTAPHEU Medicago truncatula cDNA clone mtaehac110004h09,
mRNA sequence
Length = 572
Score = 40.1 bits (20), Expect = 0.29
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 797 tcccccgcgtacctgcccgggcgg 820
||||||||||| ||||||||||||
Sbjct: 541 tcccccgcgtaactgcccgggcgg 564
>gb|AJ845902.1|AJ845902 AJ845902 MtSNF Medicago truncatula cDNA clone MtNF13D16N2, mRNA
sequence
Length = 213
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 799 ccccgcgtacctgcccgggc 818
||||||||||||||||||||
Sbjct: 194 ccccgcgtacctgcccgggc 213
>gb|AJ846304.1|AJ846304 AJ846304 MtSCF Medicago truncatula cDNA clone MtCF01C09S6, mRNA
sequence
Length = 520
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 799 ccccgcgtacctgcccgggc 818
||||||||||||||||||||
Sbjct: 20 ccccgcgtacctgcccgggc 1
>gb|AJ846328.1|AJ846328 AJ846328 MtSCF Medicago truncatula cDNA clone MtCF01H08S6, mRNA
sequence
Length = 488
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 799 ccccgcgtacctgcccgggc 818
||||||||||||||||||||
Sbjct: 20 ccccgcgtacctgcccgggc 1
>gb|AJ846329.1|AJ846329 AJ846329 MtSCF Medicago truncatula cDNA clone MtCF01H21S6, mRNA
sequence
Length = 481
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 799 ccccgcgtacctgcccgggc 818
||||||||||||||||||||
Sbjct: 20 ccccgcgtacctgcccgggc 1
>gb|AJ846333.1|AJ846333 AJ846333 MtSCF Medicago truncatula cDNA clone MtCF01I19S6, mRNA
sequence
Length = 295
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 799 ccccgcgtacctgcccgggc 818
||||||||||||||||||||
Sbjct: 20 ccccgcgtacctgcccgggc 1
>gb|AJ846353.1|AJ846353 AJ846353 MtSCF Medicago truncatula cDNA clone MtCF01M22S6, mRNA
sequence
Length = 435
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 799 ccccgcgtacctgcccgggc 818
||||||||||||||||||||
Sbjct: 20 ccccgcgtacctgcccgggc 1
>gb|AJ846376.1|AJ846376 AJ846376 MtSCF Medicago truncatula cDNA clone MtCF02C16S6, mRNA
sequence
Length = 506
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 799 ccccgcgtacctgcccgggc 818
||||||||||||||||||||
Sbjct: 20 ccccgcgtacctgcccgggc 1
>gb|AJ846383.1|AJ846383 AJ846383 MtSCF Medicago truncatula cDNA clone MtCF02D12S6, mRNA
sequence
Length = 575
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 799 ccccgcgtacctgcccgggc 818
||||||||||||||||||||
Sbjct: 20 ccccgcgtacctgcccgggc 1
>gb|AJ846429.1|AJ846429 AJ846429 MtSCF Medicago truncatula cDNA clone MtCF02L13S6, mRNA
sequence
Length = 565
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 799 ccccgcgtacctgcccgggc 818
||||||||||||||||||||
Sbjct: 20 ccccgcgtacctgcccgggc 1
>gb|AJ846448.1|AJ846448 AJ846448 MtSCF Medicago truncatula cDNA clone MtCF02P17S6, mRNA
sequence
Length = 296
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 799 ccccgcgtacctgcccgggc 818
||||||||||||||||||||
Sbjct: 20 ccccgcgtacctgcccgggc 1
>gb|AJ846460.1|AJ846460 AJ846460 MtSCF Medicago truncatula cDNA clone MtCF04B23S6, mRNA
sequence
Length = 745
Score = 40.1 bits (20), Expect = 0.29
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 799 ccccgcgtacctgcccgggc 818
||||||||||||||||||||
Sbjct: 20 ccccgcgtacctgcccgggc 1
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 109,236
Number of Sequences: 392609
Number of extensions: 109236
Number of successful extensions: 7126
Number of sequences better than 0.5: 76
Number of HSP's better than 0.5 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7050
Number of HSP's gapped (non-prelim): 76
length of query: 824
length of database: 441,732,993
effective HSP length: 20
effective length of query: 804
effective length of database: 433,880,813
effective search space: 348840173652
effective search space used: 348840173652
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)