BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521865.2.1
(638 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CG940943.1|CG940943 MBELN63TF mth2 Medicago truncatula g... 159 3e-037
emb|CR485906.1| mth2-155E9FM2 BAC end, cultivar Jemalong A1... 159 3e-037
gb|AJ621869.1|AJ621869 AJ621869 Medicago truncatula J5 root... 159 3e-037
gb|CG947524.1|CG947524 MBEIW04TR mth2 Medicago truncatula g... 137 1e-030
gb|AW693031.1|AW693031 NF058H11ST1F1000 Developing stem Med... 135 5e-030
gb|AL384546.1|AL384546 MtBC22H06R1 MtBC Medicago truncatula... 135 5e-030
gb|CA922301.1|CA922301 EST640019 MTUS Medicago truncatula c... 135 5e-030
gb|CX529380.1|CX529380 s13dNF90B12MJ093_244814 Methyl Jasmo... 135 5e-030
gb|CG948326.1|CG948326 MBEIJ89TR mth2 Medicago truncatula g... 133 2e-029
gb|CG967052.1|CG967052 MBELD67TR mth2 Medicago truncatula g... 127 1e-027
gb|BM779156.1|BM779156 EST589731 KV2 Medicago truncatula cD... 109 3e-022
gb|BM779448.1|BM779448 EST590024 KV2 Medicago truncatula cD... 105 5e-021
gb|AL381926.1|AL381926 MtBC03H02R1 MtBC Medicago truncatula... 100 3e-019
gb|AL376292.1|AL376292 MtBB22F04R1 MtBB Medicago truncatula... 96 4e-018
gb|AL384491.1|AL384491 MtBC22E01R1 MtBC Medicago truncatula... 96 4e-018
gb|AL376276.1|AL376276 MtBB22E04R1 MtBB Medicago truncatula... 88 1e-015
gb|BQ145186.1|BQ145186 NF022B10GS1F1080 Germinating Seed Me... 80 3e-013
gb|CX536378.1|CX536378 s13dNF22B10GS080_455930 Germinating ... 80 3e-013
gb|CX542265.1|CX542265 s13dNF95D09GS076_467838 Germinating ... 80 3e-013
gb|AW127189.2|AW127189 M110129 GVN Medicago truncatula cDNA... 44 0.014
>gb|CG940943.1|CG940943 MBELN63TF mth2 Medicago truncatula genomic clone 81K6, DNA sequence
Length = 925
Score = 159 bits (80), Expect = 3e-037
Identities = 194/232 (83%)
Strand = Plus / Plus
Query: 125 aggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctca 184
|||||||| |||||||||| ||||| || || || || ||||||||||||||||| ||
Sbjct: 542 aggctttcatgctgcactgtaatgcgaggagttcggattaagaagcatgcttgcatatcc 601
Query: 185 aacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatgact 244
| |||||| ||||| ||||| ||||||||||||||||||||||| | ||||||||||||
Sbjct: 602 agcagcatcatcggatggcattcaactgttggtcaatgggcacgtgtggagaatatgact 661
Query: 245 atcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctc 304
||||| || || ||||| ||||| | |||||| || ||||||||||| ||||| ||| |
Sbjct: 662 atccttggagaagatgtccatgtatctgatgaagtttacagcaatggtggtgtggttttg 721
Query: 305 ccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtgag 356
|| || || || ||||| ||||||||||||| || ||||| ||||||||||
Sbjct: 722 ccccacaaggaaatcaaaacaagcattctgaatccggagatagtcatgtgag 773
>emb|CR485906.1| mth2-155E9FM2 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 777
Score = 159 bits (80), Expect = 3e-037
Identities = 194/232 (83%)
Strand = Plus / Plus
Query: 125 aggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctca 184
|||||||| |||||||||| ||||| || || || || ||||||||||||||||| ||
Sbjct: 542 aggctttcatgctgcactgtaatgcgaggagttcggattaagaagcatgcttgcatatcc 601
Query: 185 aacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatgact 244
| |||||| ||||| ||||| ||||||||||||||||||||||| | ||||||||||||
Sbjct: 602 agcagcatcatcggatggcattcaactgttggtcaatgggcacgtgtggagaatatgact 661
Query: 245 atcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctc 304
||||| || || ||||| ||||| | |||||| || ||||||||||| ||||| ||| |
Sbjct: 662 atccttggagaagatgtccatgtatctgatgaagtttacagcaatggtggtgtggttttg 721
Query: 305 ccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtgag 356
|| || || || ||||| ||||||||||||| || ||||| ||||||||||
Sbjct: 722 ccccacaaggaaatcaaaacaagcattctgaatccggagatagtcatgtgag 773
>gb|AJ621869.1|AJ621869 AJ621869 Medicago truncatula J5 roots Medicago truncatula cDNA
clone MtGmEs773, mRNA sequence
Length = 424
Score = 159 bits (80), Expect = 3e-037
Identities = 194/232 (83%)
Strand = Plus / Plus
Query: 125 aggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctca 184
|||||||| |||||||||| ||||| || || || || ||||||||||||||||| ||
Sbjct: 50 aggctttcatgctgcactgtaatgcgaggagttcggattaagaagcatgcttgcatatcc 109
Query: 185 aacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatgact 244
| |||||| ||||| ||||| ||||||||||||||||||||||| | ||||||||||||
Sbjct: 110 agcagcatcatcggatggcattcaactgttggtcaatgggcacgtgtggagaatatgact 169
Query: 245 atcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctc 304
||||| || || ||||| ||||| | |||||| || ||||||||||| ||||| ||| |
Sbjct: 170 atccttggagaagatgtccatgtatctgatgaagtttacagcaatggtggtgtggttttg 229
Query: 305 ccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtgag 356
|| || || || ||||| ||||||||||||| || ||||| ||||||||||
Sbjct: 230 ccccacaaggaaatcaaaacaagcattctgaatccggagatagtcatgtgag 281
>gb|CG947524.1|CG947524 MBEIW04TR mth2 Medicago truncatula genomic clone 65B7, DNA sequence
Length = 899
Score = 137 bits (69), Expect = 1e-030
Identities = 147/173 (84%)
Strand = Plus / Plus
Query: 125 aggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctca 184
|||||||| |||||||||| ||||| || || || || ||||||||||||||||| ||
Sbjct: 722 aggctttcatgctgcactgtaatgcgaggagttcggattaagaagcatgcttgcatatcc 781
Query: 185 aacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatgact 244
| |||||| ||||| ||||| ||||||||||||||||||||||| | ||||||||||||
Sbjct: 782 agcagcatcatcggatggcattcaactgttggtcaatgggcacgtgtggagaatatgact 841
Query: 245 atcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgt 297
||||| || || ||||| ||||| | |||||| || ||||||||||| |||||
Sbjct: 842 atccttggagaagatgtccatgtatctgatgaagtttacagcaatggtggtgt 894
>gb|AW693031.1|AW693031 NF058H11ST1F1000 Developing stem Medicago truncatula cDNA clone
NF058H11ST 5', mRNA sequence
Length = 657
Score = 135 bits (68), Expect = 5e-030
Identities = 191/232 (82%)
Strand = Plus / Minus
Query: 125 aggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctca 184
|||||||| |||||||| || ||||| || || || |||||||| ||||||||||| ||
Sbjct: 630 aggctttcgcgctgcacagtaatgcgaggagtccggatcaagaaacatgcttgcatttcc 571
Query: 185 aacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatgact 244
| ||| ||||| || ||||| || ||||| || |||||||| || | ||||||||||||
Sbjct: 570 agcagtattattgggtggcattccactgtcgggcaatgggctcgagtggagaatatgact 511
Query: 245 atcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctc 304
||||| || || ||||||||||| ||||||||| | ||||||||||| ||||| ||| |
Sbjct: 510 atccttggagaagatgttcatgtttgtgatgagatttacagcaatggtggtgtggtttta 451
Query: 305 ccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtgag 356
|| || || ||||| ||| ||| ||||||||||| ||||| ||||||||||
Sbjct: 450 ccccacaaggagattaagacaaatattctgaagccagagattgtcatgtgag 399
>gb|AL384546.1|AL384546 MtBC22H06R1 MtBC Medicago truncatula cDNA clone MtBC22H06 T7, mRNA
sequence
Length = 550
Score = 135 bits (68), Expect = 5e-030
Identities = 191/232 (82%)
Strand = Plus / Plus
Query: 125 aggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctca 184
|||||||| |||||||| || ||||| || || || |||||||| ||||||||||| ||
Sbjct: 10 aggctttcgcgctgcacagtaatgcgaggagtccggatcaagaaacatgcttgcatttcc 69
Query: 185 aacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatgact 244
| ||| ||||| || ||||| || ||||| || |||||||| || | ||||||||||||
Sbjct: 70 agcagtattattgggtggcattccactgtcgggcaatgggctcgagtggagaatatgact 129
Query: 245 atcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctc 304
||||| || || ||||||||||| ||||||||| | ||||||||||| ||||| ||| |
Sbjct: 130 atccttggagaagatgttcatgtttgtgatgagatttacagcaatggtggtgtggtttta 189
Query: 305 ccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtgag 356
|| || || ||||| ||| ||| ||||||||||| ||||| ||||||||||
Sbjct: 190 ccccacaaggagattaagacaaatattctgaagccagagattgtcatgtgag 241
>gb|CA922301.1|CA922301 EST640019 MTUS Medicago truncatula cDNA clone MTUS-52A7, mRNA
sequence
Length = 824
Score = 135 bits (68), Expect = 5e-030
Identities = 191/232 (82%)
Strand = Plus / Minus
Query: 125 aggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctca 184
|||||||| |||||||| || ||||| || || || |||||||| ||||||||||| ||
Sbjct: 572 aggctttcgcgctgcacagtaatgcgaggagtccggatcaagaaacatgcttgcatttcc 513
Query: 185 aacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatgact 244
| ||| ||||| || ||||| || ||||| || |||||||| || | ||||||||||||
Sbjct: 512 agcagtattattgggtggcattccactgtcgggcaatgggctcgagtggagaatatgact 453
Query: 245 atcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctc 304
||||| || || ||||||||||| ||||||||| | ||||||||||| ||||| ||| |
Sbjct: 452 atccttggagaagatgttcatgtttgtgatgagatttacagcaatggtggtgtggtttta 393
Query: 305 ccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtgag 356
|| || || ||||| ||| ||| ||||||||||| ||||| ||||||||||
Sbjct: 392 ccccacaaggagattaagacaaatattctgaagccagagattgtcatgtgag 341
>gb|CX529380.1|CX529380 s13dNF90B12MJ093_244814 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 629
Score = 135 bits (68), Expect = 5e-030
Identities = 191/232 (82%)
Strand = Plus / Minus
Query: 125 aggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctca 184
|||||||| |||||||| || ||||| || || || |||||||| ||||||||||| ||
Sbjct: 588 aggctttcgcgctgcacagtaatgcgaggagtccggatcaagaaacatgcttgcatttcc 529
Query: 185 aacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatgact 244
| ||| ||||| || ||||| || ||||| || |||||||| || | ||||||||||||
Sbjct: 528 agcagtattattgggtggcattccactgtcgggcaatgggctcgagtggagaatatgact 469
Query: 245 atcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctc 304
||||| || || ||||||||||| ||||||||| | ||||||||||| ||||| ||| |
Sbjct: 468 atccttggagaagatgttcatgtttgtgatgagatttacagcaatggtggtgtggtttta 409
Query: 305 ccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatgtgag 356
|| || || ||||| ||| ||| ||||||||||| ||||| ||||||||||
Sbjct: 408 ccccacaaggagattaagacaaatattctgaagccagagattgtcatgtgag 357
>gb|CG948326.1|CG948326 MBEIJ89TR mth2 Medicago truncatula genomic clone 62O10, DNA
sequence
Length = 929
Score = 133 bits (67), Expect = 2e-029
Identities = 142/167 (85%)
Strand = Plus / Plus
Query: 125 aggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctca 184
|||||||| |||||||||| ||||| || || || || ||||||||||||||||| ||
Sbjct: 722 aggctttcatgctgcactgtaatgcgaggagttcggattaagaagcatgcttgcatatcc 781
Query: 185 aacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatgact 244
| |||||| ||||| ||||| ||||||||||||||||||||||| | ||||||||||||
Sbjct: 782 agcagcatcatcggatggcattcaactgttggtcaatgggcacgtgtggagaatatgact 841
Query: 245 atcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatgg 291
||||| || || ||||| ||||| | |||||| || |||||||||||
Sbjct: 842 atccttggagaagatgtccatgtatctgatgaagtttacagcaatgg 888
>gb|CG967052.1|CG967052 MBELD67TR mth2 Medicago truncatula genomic clone 78L14, DNA
sequence
Length = 947
Score = 127 bits (64), Expect = 1e-027
Identities = 139/164 (84%)
Strand = Plus / Plus
Query: 125 aggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctca 184
|||||||| |||||||||| ||||| || || || || ||||||||||||||||| ||
Sbjct: 722 aggctttcatgctgcactgtaatgcgaggagttcggattaagaagcatgcttgcatatcc 781
Query: 185 aacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatgact 244
| |||||| ||||| ||||| ||||||||||||||||||||||| | ||||||||||||
Sbjct: 782 agcagcatcatcggatggcattcaactgttggtcaatgggcacgtgtggagaatatgact 841
Query: 245 atcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaa 288
||||| || || ||||| ||||| | |||||| || ||||||||
Sbjct: 842 atccttggagaagatgtccatgtatctgatgaagtttacagcaa 885
>gb|BM779156.1|BM779156 EST589731 KV2 Medicago truncatula cDNA clone pKV2-51K19, mRNA
sequence
Length = 618
Score = 109 bits (55), Expect = 3e-022
Identities = 139/167 (83%)
Strand = Plus / Plus
Query: 125 aggctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctca 184
|||||||| |||||||| || ||||| || || || |||||||| ||||||||||| ||
Sbjct: 452 aggctttcgcgctgcacagtaatgcgaggagtccggatcaagaaacatgcttgcatttcc 511
Query: 185 aacagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatgact 244
| ||| ||||| || ||||| || ||||| || |||||||| || | ||||||||||||
Sbjct: 512 agcagtattattgggtggcattccactgtcgggcaatgggctcgagtggagaatatgact 571
Query: 245 atcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatgg 291
||||| || || ||||||||||| ||||||||| | |||||||||||
Sbjct: 572 atccttggagaagatgttcatgtttgtgatgagatttacagcaatgg 618
>gb|BM779448.1|BM779448 EST590024 KV2 Medicago truncatula cDNA clone pKV2-52A17, mRNA
sequence
Length = 623
Score = 105 bits (53), Expect = 5e-021
Identities = 137/165 (83%)
Strand = Plus / Plus
Query: 127 gctttcccgctgcactgtcatgcgcggcgtgcgtatcaagaagcatgcttgcatctcaaa 186
|||||| |||||||| || ||||| || || || |||||||| ||||||||||| || |
Sbjct: 459 gctttcgcgctgcacagtaatgcgaggagtccggatcaagaaacatgcttgcatttccag 518
Query: 187 cagcattatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactat 246
||| ||||| || ||||| || ||||| || |||||||| || | ||||||||||||||
Sbjct: 519 cagtattattgggtggcattccactgtcgggcaatgggctcgagtggagaatatgactat 578
Query: 247 cctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatgg 291
||| || || ||||||||||| ||||||||| | |||||||||||
Sbjct: 579 ccttggagaagatgttcatgtttgtgatgagatttacagcaatgg 623
>gb|AL381926.1|AL381926 MtBC03H02R1 MtBC Medicago truncatula cDNA clone MtBC03H02 T7, mRNA
sequence
Length = 465
Score = 99.6 bits (50), Expect = 3e-019
Identities = 137/166 (82%)
Strand = Plus / Plus
Query: 191 attatcggctggcactcaactgttggtcaatgggcacggatagagaatatgactatcctg 250
||||| || ||||| || ||||| || |||||||| || | |||||||||||||||||
Sbjct: 2 attattgggtggcattccactgtcgggcaatgggctcgagtggagaatatgactatcctt 61
Query: 251 ggggaggatgttcatgtgtgtgatgaggtgtacagcaatggcggtgttgttctcccacat 310
|| || ||||||||||| ||||||||| | ||||||||||| ||||| ||| | || ||
Sbjct: 62 ggagaagatgttcatgtttgtgatgagatttacagcaatggtggtgtggttttaccccac 121
Query: 311 aaagagatcaagtcaagcattctgaagcctgagatcgtcatgtgag 356
|| ||||| ||| ||| ||||||||||| ||||| ||||||||||
Sbjct: 122 aaggagattaagacaaatattctgaagccagagattgtcatgtgag 167
>gb|AL376292.1|AL376292 MtBB22F04R1 MtBB Medicago truncatula cDNA clone MtBB22F04 T7, mRNA
sequence
Length = 520
Score = 95.6 bits (48), Expect = 4e-018
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 233 gagaatatgactatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggc 292
||||||||||||||||| || || ||||||||||| ||||||||| | |||||||||||
Sbjct: 18 gagaatatgactatccttggagaagatgttcatgtttgtgatgagatttacagcaatggt 77
Query: 293 ggtgttgttctcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatg 352
||||| ||| | || || || ||||| ||| ||| ||||||||||| ||||| ||||||
Sbjct: 78 ggtgtggttttaccccacaaggagattaagacaaatattctgaagccagagattgtcatg 137
Query: 353 tgag 356
||||
Sbjct: 138 tgag 141
>gb|AL384491.1|AL384491 MtBC22E01R1 MtBC Medicago truncatula cDNA clone MtBC22E01 T7, mRNA
sequence
Length = 498
Score = 95.6 bits (48), Expect = 4e-018
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 233 gagaatatgactatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggc 292
||||||||||||||||| || || ||||||||||| ||||||||| | |||||||||||
Sbjct: 22 gagaatatgactatccttggagaagatgttcatgtttgtgatgagatttacagcaatggt 81
Query: 293 ggtgttgttctcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatg 352
||||| ||| | || || || ||||| ||| ||| ||||||||||| ||||| ||||||
Sbjct: 82 ggtgtggttttaccccacaaggagattaagacaaatattctgaagccagagattgtcatg 141
Query: 353 tgag 356
||||
Sbjct: 142 tgag 145
>gb|AL376276.1|AL376276 MtBB22E04R1 MtBB Medicago truncatula cDNA clone MtBB22E04 T7, mRNA
sequence
Length = 521
Score = 87.7 bits (44), Expect = 1e-015
Identities = 104/124 (83%)
Strand = Plus / Plus
Query: 233 gagaatatgactatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggc 292
||||||||||||||||| || || ||||||||||| ||||||||| | |||||||||||
Sbjct: 19 gagaatatgactatccttggagaagatgttcatgtttgtgatgagatttacagcaatggt 78
Query: 293 ggtgttgttctcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatg 352
||||| ||| | || | || ||||| ||| ||| ||||||||||| ||||| ||||||
Sbjct: 79 ggtgtggttttaccccccaaggagattaagacaaatattctgaagccagagattgtcatg 138
Query: 353 tgag 356
||||
Sbjct: 139 tgag 142
>gb|BQ145186.1|BQ145186 NF022B10GS1F1080 Germinating Seed Medicago truncatula cDNA clone
NF022B10GS 5', mRNA sequence
Length = 816
Score = 79.8 bits (40), Expect = 3e-013
Identities = 103/124 (83%)
Strand = Plus / Plus
Query: 233 gagaatatgactatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggc 292
||||||||||||||||| || || ||||| ||||| | |||||| || |||||||||||
Sbjct: 119 gagaatatgactatccttggagaagatgtccatgtatctgatgaagtttacagcaatggt 178
Query: 293 ggtgttgttctcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatg 352
||||| ||| | || || || || ||||| ||||||||||||| || ||||| ||||||
Sbjct: 179 ggtgtggttttgccccacaaggaaatcaaaacaagcattctgaatccggagatagtcatg 238
Query: 353 tgag 356
||||
Sbjct: 239 tgag 242
>gb|CX536378.1|CX536378 s13dNF22B10GS080_455930 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 178
Score = 79.8 bits (40), Expect = 3e-013
Identities = 103/124 (83%)
Strand = Plus / Plus
Query: 233 gagaatatgactatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggc 292
||||||||||||||||| || || ||||| ||||| | |||||| || |||||||||||
Sbjct: 3 gagaatatgactatccttggagaagatgtccatgtatctgatgaagtttacagcaatggt 62
Query: 293 ggtgttgttctcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatg 352
||||| ||| | || || || || ||||| ||||||||||||| || ||||| ||||||
Sbjct: 63 ggtgtggttttgccccacaaggaaatcaaaacaagcattctgaatccggagatagtcatg 122
Query: 353 tgag 356
||||
Sbjct: 123 tgag 126
>gb|CX542265.1|CX542265 s13dNF95D09GS076_467838 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 178
Score = 79.8 bits (40), Expect = 3e-013
Identities = 103/124 (83%)
Strand = Plus / Plus
Query: 233 gagaatatgactatcctgggggaggatgttcatgtgtgtgatgaggtgtacagcaatggc 292
||||||||||||||||| || || ||||| ||||| | |||||| || |||||||||||
Sbjct: 3 gagaatatgactatccttggagaagatgtccatgtatctgatgaagtttacagcaatggt 62
Query: 293 ggtgttgttctcccacataaagagatcaagtcaagcattctgaagcctgagatcgtcatg 352
||||| ||| | || || || || ||||| ||||||||||||| || ||||| ||||||
Sbjct: 63 ggtgtggttttgccccacaaggaaatcaaaacaagcattctgaatccggagatagtcatg 122
Query: 353 tgag 356
||||
Sbjct: 123 tgag 126
>gb|AW127189.2|AW127189 M110129 GVN Medicago truncatula cDNA clone N151, mRNA sequence
Length = 427
Score = 44.1 bits (22), Expect = 0.014
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 497 aatgtatcttgttttttgttga 518
||||||||||||||||||||||
Sbjct: 245 aatgtatcttgttttttgttga 224
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 170,515
Number of Sequences: 392609
Number of extensions: 170515
Number of successful extensions: 12895
Number of sequences better than 0.5: 20
Number of HSP's better than 0.5 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 12872
Number of HSP's gapped (non-prelim): 22
length of query: 638
length of database: 441,732,993
effective HSP length: 19
effective length of query: 619
effective length of database: 434,273,422
effective search space: 268815248218
effective search space used: 268815248218
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)