BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521353.2.1
(1279 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI310877.1|BI310877 EST5312627 GESD Medicago truncatula ... 137 3e-030
gb|CB892837.1|CB892837 EST645629 HOGA Medicago truncatula c... 137 3e-030
gb|CX533234.1|CX533234 s13dNF0DG10MJ072_319631 Methyl Jasmo... 137 3e-030
gb|DW017202.1|DW017202 EST1226163 MTY Medicago truncatula c... 137 3e-030
gb|DW017011.1|DW017011 EST1225972 MTY Medicago truncatula c... 129 6e-028
gb|BE325719.1|BE325719 NF059E12ST1F1098 Developing stem Med... 123 4e-026
gb|CF067990.1|CF067990 EST668711 MTUS Medicago truncatula c... 121 2e-025
gb|BG449578.1|BG449578 NF054D01IN1F1012 Insect herbivory Me... 117 2e-024
gb|BE248825.2|BE248825 NF020G02DT1F1017 Drought Medicago tr... 92 1e-016
gb|BQ140049.1|BQ140049 NF028C09PH1F1069 Phoma-infected Medi... 92 1e-016
gb|CX526883.1|CX526883 s13dNF27F08AT075_514278 Aphid-Infect... 92 1e-016
gb|DW016659.1|DW016659 EST1225620 MTY Medicago truncatula c... 92 1e-016
gb|BF646527.1|BF646527 NF075E06EC1F1050 Elicited cell cultu... 88 2e-015
gb|BG455015.1|BG455015 NF112C04LF1F1023 Developing leaf Med... 88 2e-015
gb|BI271249.1|BI271249 NF053B05FL1F1045 Developing flower M... 88 2e-015
gb|BF518530.1|BF518530 EST455977 DSIL Medicago truncatula c... 84 3e-014
gb|AC139354.5| Medicago truncatula clone mth1-64n13, comple... 82 1e-013
gb|AA660386.1|AA660386 00260 MtRHE Medicago truncatula cDNA... 78 2e-012
gb|BE326110.2|BE326110 NF085A08ST1F1054 Developing stem Med... 78 2e-012
gb|AC149472.21| Medicago truncatula clone mth2-77f21, WORKI... 74 3e-011
gb|CX520281.1|CX520281 s13dNF39G09VI072_444614 Virus-Infect... 68 2e-009
gb|AW560422.1|AW560422 EST315470 DSIR Medicago truncatula c... 52 1e-004
gb|CA918719.1|CA918719 EST636437 MTUS Medicago truncatula c... 52 1e-004
gb|BQ140404.1|BQ140404 NF035C06PH1F1050 Phoma-infected Medi... 44 0.029
gb|AQ842291.1|AQ842291 T136261b shotgun sub-library of BAC ... 40 0.45
emb|CR494929.1| mth2-168D12RM1 BAC end, cultivar Jemalong A... 40 0.45
>gb|BI310877.1|BI310877 EST5312627 GESD Medicago truncatula cDNA clone pGESD9E24 5' end,
mRNA sequence
Length = 617
Score = 137 bits (69), Expect = 3e-030
Identities = 300/377 (79%)
Strand = Plus / Minus
Query: 610 atcatggtggcaaagggtgccatgtagtacaccgtgttaatgctgtcaaacttgtatcca 669
|||||||| ||| | ||||||||||| || |||||||| ||||||||||| |||||||||
Sbjct: 542 atcatggtcgcataaggtgccatgtaataaaccgtgtttatgctgtcaaatttgtatcca 483
Query: 670 tggagtagggactctgccaagatggtctttgtagacgtagccaggcagccaaccatggca 729
|| | || || ||||| | ||||||||||||||| ||||||| ||||||| | |||
Sbjct: 482 tgcaaaagagattctgcaaggatggtctttgtagatgtagccaaacagccaagtaaggcc 423
Query: 730 gcacagaaaccgaaaatgttgaagctaagctctgtcaccgaagtcaggagtattccgcca 789
||||| || || || || || ||||| | ||| || ||||| || || || || || |||
Sbjct: 422 gcacaaaatccaaacatattaaagctcatctcagttaccgatgtgagaagaatcccccca 363
Query: 790 actatagggaccagcgaagcccatatgcgccactcgaaatgcttgctccagactagccac 849
|| || || | || |||||||| || ||||| || |||| || ||||| ||||||||
Sbjct: 362 acaatgggtataagagaagcccaaatacgccagtcaaaatatttcctccacactagccat 303
Query: 850 tgcagaataactgtggttgcaggagtgaaagatttgattgtctgcatgaaggagactggg 909
|||| || ||| ||||||||||| ||||| || || ||||||||||| || || |||||
Sbjct: 302 tgcaaaacaacagtggttgcaggtgtgaatgacttaattgtctgcataaaagaaactgga 243
Query: 910 atgtagcgcaagctgacatttcccagcacaatgtttatgcagaagacgaaggacattgga 969
||||| || | || ||||| |||||||| ||||| |||||||| || || ||||| |||
Sbjct: 242 atgtatcgtagactcacattccccagcactatgttaatgcagaacacaaatgacatcgga 183
Query: 970 aatatccttttccagcg 986
|| || |||||||||||
Sbjct: 182 aagattcttttccagcg 166
Score = 77.8 bits (39), Expect = 2e-012
Identities = 90/107 (84%)
Strand = Plus / Minus
Query: 1045 gctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatcc 1104
|||||||||| |||||||| |||||||| ||||| || | || || ||||||||||||
Sbjct: 107 gctccaatggctgagcagataaagtggacacaggatactgataggggaaacttgaaatcc 48
Query: 1105 agtttctggaagatccacttgttcatgatgatgacagtgacgttgaa 1151
| |||||| |||||||||||||| | |||||| || ||||| |||||
Sbjct: 47 aatttctgaaagatccacttgttaacgatgataacggtgacattgaa 1
>gb|CB892837.1|CB892837 EST645629 HOGA Medicago truncatula cDNA clone HOGA-19N4, mRNA
sequence
Length = 832
Score = 137 bits (69), Expect = 3e-030
Identities = 300/377 (79%)
Strand = Plus / Minus
Query: 610 atcatggtggcaaagggtgccatgtagtacaccgtgttaatgctgtcaaacttgtatcca 669
|||||||| ||| | ||||||||||| || |||||||| ||||||||||| |||||||||
Sbjct: 560 atcatggtcgcataaggtgccatgtaataaaccgtgtttatgctgtcaaatttgtatcca 501
Query: 670 tggagtagggactctgccaagatggtctttgtagacgtagccaggcagccaaccatggca 729
|| | || || ||||| | ||||||||||||||| ||||||| ||||||| | |||
Sbjct: 500 tgcaaaagagattctgcaaggatggtctttgtagatgtagccaaacagccaagtaaggcc 441
Query: 730 gcacagaaaccgaaaatgttgaagctaagctctgtcaccgaagtcaggagtattccgcca 789
||||| || || || || || ||||| | ||| || ||||| || || || || || |||
Sbjct: 440 gcacaaaatccaaacatattaaagctcatctcagttaccgatgtgagaagaatcccccca 381
Query: 790 actatagggaccagcgaagcccatatgcgccactcgaaatgcttgctccagactagccac 849
|| || || | || |||||||| || ||||| || |||| || ||||| ||||||||
Sbjct: 380 acaatgggtataagagaagcccaaatacgccagtcaaaatatttcctccacactagccat 321
Query: 850 tgcagaataactgtggttgcaggagtgaaagatttgattgtctgcatgaaggagactggg 909
|||| || ||| ||||||||||| ||||| || || ||||||||||| || || |||||
Sbjct: 320 tgcaaaacaacagtggttgcaggtgtgaatgacttaattgtctgcataaaagaaactgga 261
Query: 910 atgtagcgcaagctgacatttcccagcacaatgtttatgcagaagacgaaggacattgga 969
||||| || | || ||||| |||||||| ||||| |||||||| || || ||||| |||
Sbjct: 260 atgtatcgtagactcacattccccagcactatgttaatgcagaacacaaatgacatcgga 201
Query: 970 aatatccttttccagcg 986
|| || |||||||||||
Sbjct: 200 aagattcttttccagcg 184
Score = 63.9 bits (32), Expect = 3e-008
Identities = 90/108 (83%), Gaps = 1/108 (0%)
Strand = Plus / Minus
Query: 1045 gctccaatggaagagcagatgaagt-ggacgcaggacacggtgagagggaacttgaaatc 1103
|||||||||| |||||||| |||| |||| ||||| || | || || |||||||||||
Sbjct: 125 gctccaatggctgagcagataaagttggacacaggatactgataggggaaacttgaaatc 66
Query: 1104 cagtttctggaagatccacttgttcatgatgatgacagtgacgttgaa 1151
|| |||||| |||||||||||||| | |||||| || ||||| |||||
Sbjct: 65 caatttctgaaagatccacttgttaacgatgataacggtgacattgaa 18
Score = 52.0 bits (26), Expect = 1e-004
Identities = 77/94 (81%)
Strand = Plus / Minus
Query: 421 ttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaagatg 480
|||||||| || |||||||| || || || || || || || ||||| || || || |||
Sbjct: 749 ttaaggttcccagcaacgttaaatgttacagcagtagtggagtggatcacataaaaaatg 690
Query: 481 gagaagttaaggcagaacgcaagcacccccgaac 514
||||||||||| |||||||| |||||||| ||||
Sbjct: 689 gagaagttaagacagaacgccagcaccccagaac 656
>gb|CX533234.1|CX533234 s13dNF0DG10MJ072_319631 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 655
Score = 137 bits (69), Expect = 3e-030
Identities = 300/377 (79%)
Strand = Plus / Minus
Query: 610 atcatggtggcaaagggtgccatgtagtacaccgtgttaatgctgtcaaacttgtatcca 669
|||||||| ||| | ||||||||||| || |||||||| ||||||||||| |||||||||
Sbjct: 628 atcatggtcgcataaggtgccatgtaataaaccgtgtttatgctgtcaaatttgtatcca 569
Query: 670 tggagtagggactctgccaagatggtctttgtagacgtagccaggcagccaaccatggca 729
|| | || || ||||| | ||||||||||||||| ||||||| ||||||| | |||
Sbjct: 568 tgcaaaagagattctgcaaggatggtctttgtagatgtagccaaacagccaagtaaggcc 509
Query: 730 gcacagaaaccgaaaatgttgaagctaagctctgtcaccgaagtcaggagtattccgcca 789
||||| || || || || || ||||| | ||| || ||||| || || || || || |||
Sbjct: 508 gcacaaaatccaaacatattaaagctcatctcagttaccgatgtgagaagaatcccccca 449
Query: 790 actatagggaccagcgaagcccatatgcgccactcgaaatgcttgctccagactagccac 849
|| || || | || |||||||| || ||||| || |||| || ||||| ||||||||
Sbjct: 448 acaatgggtataagagaagcccaaatacgccagtcaaaatatttcctccacactagccat 389
Query: 850 tgcagaataactgtggttgcaggagtgaaagatttgattgtctgcatgaaggagactggg 909
|||| || ||| ||||||||||| ||||| || || ||||||||||| || || |||||
Sbjct: 388 tgcaaaacaacagtggttgcaggtgtgaatgacttaattgtctgcataaaagaaactgga 329
Query: 910 atgtagcgcaagctgacatttcccagcacaatgtttatgcagaagacgaaggacattgga 969
||||| || | || ||||| |||||||| ||||| |||||||| || || ||||| |||
Sbjct: 328 atgtatcgtagactcacattccccagcactatgttaatgcagaacacaaatgacatcgga 269
Query: 970 aatatccttttccagcg 986
|| || |||||||||||
Sbjct: 268 aagattcttttccagcg 252
Score = 77.8 bits (39), Expect = 2e-012
Identities = 90/107 (84%)
Strand = Plus / Minus
Query: 1045 gctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatcc 1104
|||||||||| |||||||| |||||||| ||||| || | || || ||||||||||||
Sbjct: 193 gctccaatggctgagcagataaagtggacacaggatactgataggggaaacttgaaatcc 134
Query: 1105 agtttctggaagatccacttgttcatgatgatgacagtgacgttgaa 1151
| |||||| |||||||||||||| | |||||| || ||||| |||||
Sbjct: 133 aatttctgaaagatccacttgttaacgatgataacggtgacattgaa 87
>gb|DW017202.1|DW017202 EST1226163 MTY Medicago truncatula cDNA clone MTYAQ73, mRNA
sequence
Length = 793
Score = 137 bits (69), Expect = 3e-030
Identities = 300/377 (79%)
Strand = Plus / Minus
Query: 610 atcatggtggcaaagggtgccatgtagtacaccgtgttaatgctgtcaaacttgtatcca 669
|||||||| ||| | ||||||||||| || |||||||| ||||||||||| |||||||||
Sbjct: 706 atcatggtcgcataaggtgccatgtaataaaccgtgtttatgctgtcaaatttgtatcca 647
Query: 670 tggagtagggactctgccaagatggtctttgtagacgtagccaggcagccaaccatggca 729
|| | || || ||||| | ||||||||||||||| ||||||| ||||||| | |||
Sbjct: 646 tgcaaaagagattctgcaaggatggtctttgtagatgtagccaaacagccaagtaaggcc 587
Query: 730 gcacagaaaccgaaaatgttgaagctaagctctgtcaccgaagtcaggagtattccgcca 789
||||| || || || || || ||||| | ||| || ||||| || || || || || |||
Sbjct: 586 gcacaaaatccaaacatattaaagctcatctcagttaccgatgtgagaagaatcccccca 527
Query: 790 actatagggaccagcgaagcccatatgcgccactcgaaatgcttgctccagactagccac 849
|| || || | || |||||||| || ||||| || |||| || ||||| ||||||||
Sbjct: 526 acaatgggtataagagaagcccaaatacgccagtcaaaatatttcctccacactagccat 467
Query: 850 tgcagaataactgtggttgcaggagtgaaagatttgattgtctgcatgaaggagactggg 909
|||| || ||| ||||||||||| ||||| || || ||||||||||| || || |||||
Sbjct: 466 tgcaaaacaacagtggttgcaggtgtgaatgacttaattgtctgcataaaagaaactgga 407
Query: 910 atgtagcgcaagctgacatttcccagcacaatgtttatgcagaagacgaaggacattgga 969
||||| || | || ||||| |||||||| ||||| |||||||| || || ||||| |||
Sbjct: 406 atgtatcgtagactcacattccccagcactatgttaatgcagaacacaaatgacatcgga 347
Query: 970 aatatccttttccagcg 986
|| || |||||||||||
Sbjct: 346 aagattcttttccagcg 330
Score = 77.8 bits (39), Expect = 2e-012
Identities = 90/107 (84%)
Strand = Plus / Minus
Query: 1045 gctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatcc 1104
|||||||||| |||||||| |||||||| ||||| || | || || ||||||||||||
Sbjct: 271 gctccaatggctgagcagataaagtggacacaggatactgataggggaaacttgaaatcc 212
Query: 1105 agtttctggaagatccacttgttcatgatgatgacagtgacgttgaa 1151
| |||||| |||||||||||||| | |||||| || ||||| |||||
Sbjct: 211 aatttctgaaagatccacttgttaacgatgataacggtgacattgaa 165
>gb|DW017011.1|DW017011 EST1225972 MTY Medicago truncatula cDNA clone MTYAO39, mRNA
sequence
Length = 811
Score = 129 bits (65), Expect = 6e-028
Identities = 260/325 (80%)
Strand = Plus / Minus
Query: 610 atcatggtggcaaagggtgccatgtagtacaccgtgttaatgctgtcaaacttgtatcca 669
|||| ||| ||||| |||||||||| || || || || ||||||||||| ||||| |||
Sbjct: 662 atcaaggttgcaaaaggtgccatgtgataaactgtatttatgctgtcaaatttgtaacca 603
Query: 670 tggagtagggactctgccaagatggtctttgtagacgtagccaggcagccaaccatggca 729
|| | || | |||||| | ||| ||||||||||| ||||||| ||||||| | ||||
Sbjct: 602 tgcaacagagcctctgcaaggatagtctttgtagaagtagccaaacagccaaataaggca 543
Query: 730 gcacagaaaccgaaaatgttgaagctaagctctgtcaccgaagtcaggagtattccgcca 789
||||| || ||||| ||||| || ||||||||||| | || ||||| || ||||| |||
Sbjct: 542 gcacaaaatccgaacatgttaaaactaagctctgtaatagatgtcagaagaattcctcca 483
Query: 790 actatagggaccagcgaagcccatatgcgccactcgaaatgcttgctccagactagccac 849
|| || || || || |||||||| || ||||| || |||| || ||||| |||||||||
Sbjct: 482 acaatgggtacgagagaagcccaaatacgccagtcaaaatattttctccatactagccac 423
Query: 850 tgcagaataactgtggttgcaggagtgaaagatttgattgtctgcatgaaggagactggg 909
|||| || |||||| |||||||||||||| || || ||||| ||||| || || |||||
Sbjct: 422 tgcaaaacaactgttgttgcaggagtgaatgactttattgtttgcataaaagaaactggt 363
Query: 910 atgtagcgcaagctgacatttccca 934
|||||||| | ||| ||||| ||||
Sbjct: 362 atgtagcgtaggctcacattcccca 338
Score = 79.8 bits (40), Expect = 5e-013
Identities = 97/116 (83%)
Strand = Plus / Minus
Query: 1045 gctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatcc 1104
|||||||||| |||||||| ||||||| ||||| || | || || ||||||||||||
Sbjct: 227 gctccaatggctgagcagataaagtggatacaggataccgataggggaaacttgaaatcc 168
Query: 1105 agtttctggaagatccacttgttcatgatgatgacagtgacgttgaagccccacca 1160
|||||| |||||||| ||||||||||| ||||||||||| ||||| |||||||
Sbjct: 167 gatttctgaaagatccatttgttcatgataatgacagtgacattgaaagcccacca 112
>gb|BE325719.1|BE325719 NF059E12ST1F1098 Developing stem Medicago truncatula cDNA clone
NF059E12ST 5', mRNA sequence
Length = 650
Score = 123 bits (62), Expect = 4e-026
Identities = 300/378 (79%), Gaps = 1/378 (0%)
Strand = Plus / Minus
Query: 610 atcatggtggcaaagggtgccatgtagtacaccgtgttaatgctgtcaaactt-gtatcc 668
|||||||| ||| | ||||||||||| || |||||||| ||||||||||| || ||||||
Sbjct: 599 atcatggtcgcataaggtgccatgtaataaaccgtgtttatgctgtcaaattttgtatcc 540
Query: 669 atggagtagggactctgccaagatggtctttgtagacgtagccaggcagccaaccatggc 728
||| | || || ||||| | ||||||||||||||| ||||||| ||||||| | |||
Sbjct: 539 atgcaaaagagattctgcaaggatggtctttgtagatgtagccaaacagccaagtaaggc 480
Query: 729 agcacagaaaccgaaaatgttgaagctaagctctgtcaccgaagtcaggagtattccgcc 788
||||| || || || || || ||||| | ||| || ||||| || || || || || ||
Sbjct: 479 cgcacaaaatccaaacatattaaagctcatctcagttaccgatgtgagaagaatcccccc 420
Query: 789 aactatagggaccagcgaagcccatatgcgccactcgaaatgcttgctccagactagcca 848
||| || || | || |||||||| || ||||| || |||| || ||||| ||||||||
Sbjct: 419 aacaatgggtataagagaagcccaaatacgccagtcaaaatatttcctccacactagcca 360
Query: 849 ctgcagaataactgtggttgcaggagtgaaagatttgattgtctgcatgaaggagactgg 908
|||| || ||| ||||||||||| ||||| || || ||||||||||| || || |||||
Sbjct: 359 ttgcaaaacaacagtggttgcaggtgtgaatgacttaattgtctgcataaaagaaactgg 300
Query: 909 gatgtagcgcaagctgacatttcccagcacaatgtttatgcagaagacgaaggacattgg 968
||||| || | || ||||| |||||||| ||||| |||||||| || || ||||| ||
Sbjct: 299 aatgtatcgtagactcacattccccagcactatgttaatgcagaacacaaatgacatcgg 240
Query: 969 aaatatccttttccagcg 986
||| || |||||||||||
Sbjct: 239 aaagattcttttccagcg 222
Score = 77.8 bits (39), Expect = 2e-012
Identities = 90/107 (84%)
Strand = Plus / Minus
Query: 1045 gctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatcc 1104
|||||||||| |||||||| |||||||| ||||| || | || || ||||||||||||
Sbjct: 163 gctccaatggctgagcagataaagtggacacaggatactgataggggaaacttgaaatcc 104
Query: 1105 agtttctggaagatccacttgttcatgatgatgacagtgacgttgaa 1151
| |||||| |||||||||||||| | |||||| || ||||| |||||
Sbjct: 103 aatttctgaaagatccacttgttaacgatgataacggtgacattgaa 57
>gb|CF067990.1|CF067990 EST668711 MTUS Medicago truncatula cDNA clone MTUS-2C10, mRNA
sequence
Length = 588
Score = 121 bits (61), Expect = 2e-025
Identities = 298/377 (79%)
Strand = Plus / Minus
Query: 610 atcatggtggcaaagggtgccatgtagtacaccgtgttaatgctgtcaaacttgtatcca 669
|||||||| ||| | ||||||||||| || ||||||| ||||||||||| |||||||||
Sbjct: 542 atcatggtcgcataaggtgccatgtaataacccgtgtttatgctgtcaaatttgtatcca 483
Query: 670 tggagtagggactctgccaagatggtctttgtagacgtagccaggcagccaaccatggca 729
|| | || || ||||| | ||||||||| ||||| ||||||| ||||||| | |||
Sbjct: 482 tgcaaaagagattctgcaaggatggtcttggtagatgtagccaaacagccaagtaaggcc 423
Query: 730 gcacagaaaccgaaaatgttgaagctaagctctgtcaccgaagtcaggagtattccgcca 789
||||| || || || || || ||||| | ||| || ||||| || || || || || |||
Sbjct: 422 gcacaaaatccaaacatattaaagctcatctcagttaccgatgtgagaagaatcccccca 363
Query: 790 actatagggaccagcgaagcccatatgcgccactcgaaatgcttgctccagactagccac 849
|| || || | || |||||||| || ||||| || |||| || ||||| ||||||||
Sbjct: 362 acaatgggtataagagaagcccaaatacgccagtcaaaatatttcctccacactagccat 303
Query: 850 tgcagaataactgtggttgcaggagtgaaagatttgattgtctgcatgaaggagactggg 909
|||| || ||| ||||||||||| ||||| || || ||||||||||| || || |||||
Sbjct: 302 tgcaaaacaacagtggttgcaggtgtgaatgacttaattgtctgcataaaagaaactgga 243
Query: 910 atgtagcgcaagctgacatttcccagcacaatgtttatgcagaagacgaaggacattgga 969
||||| || | || ||||| |||||||| ||||| |||||||| || || ||||| |||
Sbjct: 242 atgtatcgtagactcacattccccagcactatgttaatgcagaacacaaatgacatcgga 183
Query: 970 aatatccttttccagcg 986
|| || |||||||||||
Sbjct: 182 aagattcttttccagcg 166
Score = 77.8 bits (39), Expect = 2e-012
Identities = 90/107 (84%)
Strand = Plus / Minus
Query: 1045 gctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatcc 1104
|||||||||| |||||||| |||||||| ||||| || | || || ||||||||||||
Sbjct: 107 gctccaatggctgagcagataaagtggacacaggatactgataggggaaacttgaaatcc 48
Query: 1105 agtttctggaagatccacttgttcatgatgatgacagtgacgttgaa 1151
| |||||| |||||||||||||| | |||||| || ||||| |||||
Sbjct: 47 aatttctgaaagatccacttgttaacgatgataacggtgacattgaa 1
>gb|BG449578.1|BG449578 NF054D01IN1F1012 Insect herbivory Medicago truncatula cDNA clone
NF054D01IN 5', mRNA sequence
Length = 663
Score = 117 bits (59), Expect = 2e-024
Identities = 258/325 (79%)
Strand = Plus / Minus
Query: 610 atcatggtggcaaagggtgccatgtagtacaccgtgttaatgctgtcaaacttgtatcca 669
|||| ||| ||||| |||||||||| || || || || ||||||||||| ||||| |||
Sbjct: 644 atcaaggttgcaaaaggtgccatgtgataaactgtatttatgctgtcaaatttgtaacca 585
Query: 670 tggagtagggactctgccaagatggtctttgtagacgtagccaggcagccaaccatggca 729
|| | || | || ||| | ||| ||||||||||| ||||||| ||||||| | ||||
Sbjct: 584 tgcaacagagcctntgcaaggatagtctttgtagaagtagccaaacagccaaataaggca 525
Query: 730 gcacagaaaccgaaaatgttgaagctaagctctgtcaccgaagtcaggagtattccgcca 789
||||| || ||||| ||||| || |||||||||| | || ||||| || ||||| |||
Sbjct: 524 gcacaaaatccgaacatgttaaaantaagctctgtaatagatgtcagaagaattcctcca 465
Query: 790 actatagggaccagcgaagcccatatgcgccactcgaaatgcttgctccagactagccac 849
|| || || || || |||||||| || ||||| || |||| || ||||| |||||||||
Sbjct: 464 acaatgggtacgagagaagcccaaatacgccagtcaaaatattttctccatactagccac 405
Query: 850 tgcagaataactgtggttgcaggagtgaaagatttgattgtctgcatgaaggagactggg 909
|||| || |||||| |||||||||||||| || || ||||| ||||| || || |||||
Sbjct: 404 tgcaaaacaactgttgttgcaggagtgaatgactttattgtttgcataaaagaaactggt 345
Query: 910 atgtagcgcaagctgacatttccca 934
|||||||| | ||| ||||| ||||
Sbjct: 344 atgtagcgtaggctcacattcccca 320
Score = 87.7 bits (44), Expect = 2e-015
Identities = 98/116 (84%)
Strand = Plus / Minus
Query: 1045 gctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatcc 1104
|||||||||| |||||||| ||||||| ||||| || | || || ||||||||||||
Sbjct: 209 gctccaatggctgagcagataaagtggatacaggataccgataggggaaacttgaaatcc 150
Query: 1105 agtttctggaagatccacttgttcatgatgatgacagtgacgttgaagccccacca 1160
| |||||| |||||||| ||||||||||| ||||||||||| ||||| |||||||
Sbjct: 149 aatttctgaaagatccatttgttcatgataatgacagtgacattgaaagcccacca 94
>gb|BE248825.2|BE248825 NF020G02DT1F1017 Drought Medicago truncatula cDNA clone NF020G02DT
5', mRNA sequence
Length = 443
Score = 91.7 bits (46), Expect = 1e-016
Identities = 148/182 (81%)
Strand = Plus / Minus
Query: 805 gaagcccatatgcgccactcgaaatgcttgctccagactagccactgcagaataactgtg 864
|||||||| || ||||| || |||| || ||||| |||||||| |||| || ||| |||
Sbjct: 421 gaagcccaaatacgccagtcaaaatatttcctccacactagccattgcaaaacaacagtg 362
Query: 865 gttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgcaagctg 924
|||||||| ||||| || || ||||||||||| || || ||||| ||||| || | ||
Sbjct: 361 gttgcaggtgtgaatgacttaattgtctgcataaaagaaactggaatgtatcgtagactc 302
Query: 925 acatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttttccag 984
||||| |||||||| ||||| |||||||| || || ||||| ||||| || |||||||||
Sbjct: 301 acattccccagcactatgttaatgcagaacacaaatgacatcggaaagattcttttccag 242
Query: 985 cg 986
||
Sbjct: 241 cg 240
Score = 77.8 bits (39), Expect = 2e-012
Identities = 90/107 (84%)
Strand = Plus / Minus
Query: 1045 gctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatcc 1104
|||||||||| |||||||| |||||||| ||||| || | || || ||||||||||||
Sbjct: 181 gctccaatggctgagcagataaagtggacacaggatactgataggggaaacttgaaatcc 122
Query: 1105 agtttctggaagatccacttgttcatgatgatgacagtgacgttgaa 1151
| |||||| |||||||||||||| | |||||| || ||||| |||||
Sbjct: 121 aatttctgaaagatccacttgttaacgatgataacggtgacattgaa 75
>gb|BQ140049.1|BQ140049 NF028C09PH1F1069 Phoma-infected Medicago truncatula cDNA clone
NF028C09PH 5', mRNA sequence
Length = 573
Score = 91.7 bits (46), Expect = 1e-016
Identities = 148/182 (81%)
Strand = Plus / Minus
Query: 805 gaagcccatatgcgccactcgaaatgcttgctccagactagccactgcagaataactgtg 864
|||||||| || ||||| || |||| || ||||| |||||||| |||| || ||| |||
Sbjct: 493 gaagcccaaatacgccagtcaaaatatttcctccacactagccattgcaaaacaacagtg 434
Query: 865 gttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgcaagctg 924
|||||||| ||||| || || ||||||||||| || || ||||| ||||| || | ||
Sbjct: 433 gttgcaggtgtgaatgacttaattgtctgcataaaagaaactggaatgtatcgtagactc 374
Query: 925 acatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttttccag 984
||||| |||||||| ||||| |||||||| || || ||||| ||||| || |||||||||
Sbjct: 373 acattccccagcactatgttaatgcagaacacaaatgacatcggaaagattcttttccag 314
Query: 985 cg 986
||
Sbjct: 313 cg 312
Score = 77.8 bits (39), Expect = 2e-012
Identities = 90/107 (84%)
Strand = Plus / Minus
Query: 1045 gctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatcc 1104
|||||||||| |||||||| |||||||| ||||| || | || || ||||||||||||
Sbjct: 253 gctccaatggctgagcagataaagtggacacaggatactgataggggaaacttgaaatcc 194
Query: 1105 agtttctggaagatccacttgttcatgatgatgacagtgacgttgaa 1151
| |||||| |||||||||||||| | |||||| || ||||| |||||
Sbjct: 193 aatttctgaaagatccacttgttaacgatgataacggtgacattgaa 147
>gb|CX526883.1|CX526883 s13dNF27F08AT075_514278 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 642
Score = 91.7 bits (46), Expect = 1e-016
Identities = 148/182 (81%)
Strand = Plus / Minus
Query: 805 gaagcccatatgcgccactcgaaatgcttgctccagactagccactgcagaataactgtg 864
|||||||| || ||||| || |||| || ||||| |||||||| |||| || ||| |||
Sbjct: 500 gaagcccaaatacgccagtcaaaatatttcctccacactagccattgcaaaacaacagtg 441
Query: 865 gttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgcaagctg 924
|||||||| ||||| || || ||||||||||| || || ||||| ||||| || | ||
Sbjct: 440 gttgcaggtgtgaatgacttaattgtctgcataaaagaaactggaatgtatcgtagactc 381
Query: 925 acatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttttccag 984
||||| |||||||| ||||| |||||||| || || ||||| ||||| || |||||||||
Sbjct: 380 acattccccagcactatgttaatgcagaacacaaatgacatcggaaagattcttttccag 321
Query: 985 cg 986
||
Sbjct: 320 cg 319
Score = 77.8 bits (39), Expect = 2e-012
Identities = 90/107 (84%)
Strand = Plus / Minus
Query: 1045 gctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatcc 1104
|||||||||| |||||||| |||||||| ||||| || | || || ||||||||||||
Sbjct: 260 gctccaatggctgagcagataaagtggacacaggatactgataggggaaacttgaaatcc 201
Query: 1105 agtttctggaagatccacttgttcatgatgatgacagtgacgttgaa 1151
| |||||| |||||||||||||| | |||||| || ||||| |||||
Sbjct: 200 aatttctgaaagatccacttgttaacgatgataacggtgacattgaa 154
>gb|DW016659.1|DW016659 EST1225620 MTY Medicago truncatula cDNA clone MTYAK02, mRNA
sequence
Length = 610
Score = 91.7 bits (46), Expect = 1e-016
Identities = 148/182 (81%)
Strand = Plus / Minus
Query: 805 gaagcccatatgcgccactcgaaatgcttgctccagactagccactgcagaataactgtg 864
|||||||| || ||||| || |||| || ||||| |||||||| |||| || ||| |||
Sbjct: 491 gaagcccaaatacgccagtcaaaatatttcctccacactagccattgcaaaacaacagtg 432
Query: 865 gttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgcaagctg 924
|||||||| ||||| || || ||||||||||| || || ||||| ||||| || | ||
Sbjct: 431 gttgcaggtgtgaatgacttaattgtctgcataaaagaaactggaatgtatcgtagactc 372
Query: 925 acatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttttccag 984
||||| |||||||| ||||| |||||||| || || ||||| ||||| || |||||||||
Sbjct: 371 acattccccagcactatgttaatgcagaacacaaatgacatcggaaagattcttttccag 312
Query: 985 cg 986
||
Sbjct: 311 cg 310
Score = 77.8 bits (39), Expect = 2e-012
Identities = 90/107 (84%)
Strand = Plus / Minus
Query: 1045 gctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatcc 1104
|||||||||| |||||||| |||||||| ||||| || | || || ||||||||||||
Sbjct: 251 gctccaatggctgagcagataaagtggacacaggatactgataggggaaacttgaaatcc 192
Query: 1105 agtttctggaagatccacttgttcatgatgatgacagtgacgttgaa 1151
| |||||| |||||||||||||| | |||||| || ||||| |||||
Sbjct: 191 aatttctgaaagatccacttgttaacgatgataacggtgacattgaa 145
>gb|BF646527.1|BF646527 NF075E06EC1F1050 Elicited cell culture Medicago truncatula cDNA clone
NF075E06EC 5', mRNA sequence
Length = 622
Score = 87.7 bits (44), Expect = 2e-015
Identities = 98/116 (84%)
Strand = Plus / Minus
Query: 1045 gctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatcc 1104
|||||||||| |||||||| ||||||| ||||| || | || || ||||||||||||
Sbjct: 385 gctccaatggctgagcagataaagtggatacaggataccgataggggaaacttgaaatcc 326
Query: 1105 agtttctggaagatccacttgttcatgatgatgacagtgacgttgaagccccacca 1160
| |||||| |||||||| ||||||||||| ||||||||||| ||||| |||||||
Sbjct: 325 aatttctgaaagatccatttgttcatgataatgacagtgacattgaaagcccacca 270
Score = 69.9 bits (35), Expect = 5e-010
Identities = 83/99 (83%)
Strand = Plus / Minus
Query: 836 tccagactagccactgcagaataactgtggttgcaggagtgaaagatttgattgtctgca 895
|||| ||||||||||||| || |||||| |||||||||||||| || || ||||| ||||
Sbjct: 594 tccatactagccactgcaaaacaactgttgttgcaggagtgaatgactttattgtttgca 535
Query: 896 tgaaggagactgggatgtagcgcaagctgacatttccca 934
| || || ||||| |||||||| | ||| ||||| ||||
Sbjct: 534 taaaagaaactggtatgtagcgtaggctcacattcccca 496
>gb|BG455015.1|BG455015 NF112C04LF1F1023 Developing leaf Medicago truncatula cDNA clone
NF112C04LF 5', mRNA sequence
Length = 594
Score = 87.7 bits (44), Expect = 2e-015
Identities = 98/116 (84%)
Strand = Plus / Minus
Query: 1045 gctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatcc 1104
|||||||||| |||||||| ||||||| ||||| || | || || ||||||||||||
Sbjct: 295 gctccaatggctgagcagataaagtggatacaggataccgataggggaaacttgaaatcc 236
Query: 1105 agtttctggaagatccacttgttcatgatgatgacagtgacgttgaagccccacca 1160
| |||||| |||||||| ||||||||||| ||||||||||| ||||| |||||||
Sbjct: 235 aatttctgaaagatccatttgttcatgataatgacagtgacattgaaagcccacca 180
Score = 75.8 bits (38), Expect = 8e-012
Identities = 107/130 (82%)
Strand = Plus / Minus
Query: 805 gaagcccatatgcgccactcgaaatgcttgctccagactagccactgcagaataactgtg 864
|||||||| || ||||| || |||| || ||||| ||||||||||||| || ||||||
Sbjct: 535 gaagcccaaatacgccagtcaaaatattttctccatactagccactgcaaaacaactgtt 476
Query: 865 gttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgcaagctg 924
|||||||||||||| || || ||||| ||||| || || ||||| |||||||| | |||
Sbjct: 475 gttgcaggagtgaatgactttattgtttgcataaaagaaactggtatgtagcgtaggctc 416
Query: 925 acatttccca 934
||||| ||||
Sbjct: 415 acattcccca 406
>gb|BI271249.1|BI271249 NF053B05FL1F1045 Developing flower Medicago truncatula cDNA clone
NF053B05FL 5', mRNA sequence
Length = 620
Score = 87.7 bits (44), Expect = 2e-015
Identities = 98/116 (84%)
Strand = Plus / Minus
Query: 1045 gctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatcc 1104
|||||||||| |||||||| ||||||| ||||| || | || || ||||||||||||
Sbjct: 387 gctccaatggctgagcagataaagtggatacaggataccgataggggaaacttgaaatcc 328
Query: 1105 agtttctggaagatccacttgttcatgatgatgacagtgacgttgaagccccacca 1160
| |||||| |||||||| ||||||||||| ||||||||||| ||||| |||||||
Sbjct: 327 aatttctgaaagatccatttgttcatgataatgacagtgacattgaaagcccacca 272
Score = 48.1 bits (24), Expect = 0.002
Identities = 76/92 (82%), Gaps = 1/92 (1%)
Strand = Plus / Minus
Query: 844 agccactgcagaataactgtggttgcaggagtgaaa-gatttgattgtctgcatgaagga 902
|||||||||| || || ||| ||||||||||||||| || || ||||| ||||| || ||
Sbjct: 589 agccactgcaaaacaattgttgttgcaggagtgaaatgactttattgtttgcataaaaga 530
Query: 903 gactgggatgtagcgcaagctgacatttccca 934
||||| |||||||| | ||| ||||| ||||
Sbjct: 529 aactggtatgtagcgtaggctcacattcccca 498
>gb|BF518530.1|BF518530 EST455977 DSIL Medicago truncatula cDNA clone pDSIL-5M2, mRNA
sequence
Length = 361
Score = 83.8 bits (42), Expect = 3e-014
Identities = 147/182 (80%)
Strand = Plus / Minus
Query: 805 gaagcccatatgcgccactcgaaatgcttgctccagactagccactgcagaataactgtg 864
|||||||| || ||||| || |||| || ||||| |||||||| ||| || ||| |||
Sbjct: 347 gaagcccaaatacgccagtcaaaatatttcctccacactagccattgctaaacaacagtg 288
Query: 865 gttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgcaagctg 924
|||||||| ||||| || || ||||||||||| || || ||||| ||||| || | ||
Sbjct: 287 gttgcaggtgtgaatgacttaattgtctgcataaaagaaactggaatgtatcgtagactc 228
Query: 925 acatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttttccag 984
||||| |||||||| ||||| |||||||| || || ||||| ||||| || |||||||||
Sbjct: 227 acattccccagcactatgttaatgcagaacacaaatgacatcggaaagattcttttccag 168
Query: 985 cg 986
||
Sbjct: 167 cg 166
Score = 77.8 bits (39), Expect = 2e-012
Identities = 90/107 (84%)
Strand = Plus / Minus
Query: 1045 gctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatcc 1104
|||||||||| |||||||| |||||||| ||||| || | || || ||||||||||||
Sbjct: 107 gctccaatggctgagcagataaagtggacacaggatactgataggggaaacttgaaatcc 48
Query: 1105 agtttctggaagatccacttgttcatgatgatgacagtgacgttgaa 1151
| |||||| |||||||||||||| | |||||| || ||||| |||||
Sbjct: 47 aatttctgaaagatccacttgttaacgatgataacggtgacattgaa 1
>gb|AC139354.5| Medicago truncatula clone mth1-64n13, complete sequence
Length = 114031
Score = 81.8 bits (41), Expect = 1e-013
Identities = 170/213 (79%)
Strand = Plus / Plus
Query: 652 ctgtcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagcc 711
|||||||| ||||| ||||| | || | |||||| | ||| ||||||||||| ||||||
Sbjct: 53265 ctgtcaaatttgtaaccatgcaacagagcctctgcaaggatagtctttgtagaagtagcc 53324
Query: 712 aggcagccaaccatggcagcacagaaaccgaaaatgttgaagctaagctctgtcaccgaa 771
| ||||||| | ||||||||| || ||||| ||||| || ||||||||||| | ||
Sbjct: 53325 aaacagccaaataaggcagcacaaaatccgaacatgttaaaactaagctctgtaatagat 53384
Query: 772 gtcaggagtattccgccaactatagggaccagcgaagcccatatgcgccactcgaaatgc 831
||||| || ||||| ||||| || || || || |||||||| || ||||| || ||||
Sbjct: 53385 gtcagaagaattcctccaacaatgggtacgagagaagcccaaatacgccagtcaaaatat 53444
Query: 832 ttgctccagactagccactgcagaataactgtg 864
|| ||||| ||||||||||||| || |||||||
Sbjct: 53445 tttctccatactagccactgcaaaacaactgtg 53477
Score = 54.0 bits (27), Expect = 3e-005
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1114 aagatccacttgttcatgatgatgacagtgacgttgaagccccacca 1160
|||||||| ||||||||||| ||||||||||| ||||| |||||||
Sbjct: 55183 aagatccatttgttcatgataatgacagtgacattgaaagcccacca 55229
Score = 46.1 bits (23), Expect = 0.007
Identities = 62/75 (82%)
Strand = Plus / Plus
Query: 860 ctgtggttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgca 919
|||| |||||||||||||| || || ||||| ||||| || || ||||| |||||||| |
Sbjct: 53563 ctgttgttgcaggagtgaatgactttattgtttgcataaaagaaactggtatgtagcgta 53622
Query: 920 agctgacatttccca 934
||| ||||| ||||
Sbjct: 53623 ggctcacattcccca 53637
Score = 40.1 bits (20), Expect = 0.45
Identities = 56/68 (82%)
Strand = Plus / Plus
Query: 1045 gctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatcc 1104
|||||||||| |||||||| ||||||| ||||| || | || || ||||||||||||
Sbjct: 53748 gctccaatggctgagcagataaagtggatacaggataccgataggggaaacttgaaatcc 53807
Query: 1105 agtttctg 1112
| ||||||
Sbjct: 53808 aatttctg 53815
>gb|AA660386.1|AA660386 00260 MtRHE Medicago truncatula cDNA 5', mRNA sequence
Length = 633
Score = 77.8 bits (39), Expect = 2e-012
Identities = 90/107 (84%)
Strand = Plus / Minus
Query: 1045 gctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatcc 1104
|||||||||| |||||||| |||||||| ||||| || | || || ||||||||||||
Sbjct: 292 gctccaatggctgagcagataaagtggacacaggatactgataggggaaacttgaaatcc 233
Query: 1105 agtttctggaagatccacttgttcatgatgatgacagtgacgttgaa 1151
| |||||| |||||||||||||| | |||||| || ||||| |||||
Sbjct: 232 aatttctgaaagatccacttgttaacgatgataacggtgacattgaa 186
>gb|BE326110.2|BE326110 NF085A08ST1F1054 Developing stem Medicago truncatula cDNA clone
NF085A08ST 5', mRNA sequence
Length = 473
Score = 77.8 bits (39), Expect = 2e-012
Identities = 90/107 (84%)
Strand = Plus / Minus
Query: 1045 gctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatcc 1104
|||||||||| |||||||| |||||||| ||||| || | || || ||||||||||||
Sbjct: 293 gctccaatggctgagcagataaagtggacacaggatactgataggggaaacttgaaatcc 234
Query: 1105 agtttctggaagatccacttgttcatgatgatgacagtgacgttgaa 1151
| |||||| |||||||||||||| | |||||| || ||||| |||||
Sbjct: 233 aatttctgaaagatccacttgttaacgatgataacggtgacattgaa 187
>gb|AC149472.21| Medicago truncatula clone mth2-77f21, WORKING DRAFT SEQUENCE, 2 ordered
pieces
Length = 124565
Score = 73.8 bits (37), Expect = 3e-011
Identities = 103/125 (82%)
Strand = Plus / Minus
Query: 862 gtggttgcaggagtgaaagatttgattgtctgcatgaaggagactgggatgtagcgcaag 921
||||||||||| ||||| || || ||||||||||| || || ||||| ||||| || |
Sbjct: 71437 gtggttgcaggtgtgaatgacttaattgtctgcataaaagaaactggaatgtatcgtaga 71378
Query: 922 ctgacatttcccagcacaatgtttatgcagaagacgaaggacattggaaatatccttttc 981
|| ||||| |||||||| ||||| |||||||| || || ||||| ||||| || ||||||
Sbjct: 71377 ctcacattccccagcactatgttaatgcagaacacaaatgacatcggaaagattcttttc 71318
Query: 982 cagcg 986
|||||
Sbjct: 71317 cagcg 71313
Score = 52.0 bits (26), Expect = 1e-004
Identities = 77/94 (81%)
Strand = Plus / Minus
Query: 421 ttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaagatg 480
|||||||| || |||||||| || || || || || || || ||||| || || || |||
Sbjct: 74993 ttaaggttcccagcaacgttaaatgttacagcagtagtggagtggatcacataaaaaatg 74934
Query: 481 gagaagttaaggcagaacgcaagcacccccgaac 514
||||||||||| |||||||| |||||||| ||||
Sbjct: 74933 gagaagttaagacagaacgccagcaccccagaac 74900
Score = 52.0 bits (26), Expect = 1e-004
Identities = 59/70 (84%)
Strand = Plus / Minus
Query: 652 ctgtcaaacttgtatccatggagtagggactctgccaagatggtctttgtagacgtagcc 711
|||||||| ||||||||||| | || || ||||| | ||||||||||||||| ||||||
Sbjct: 71747 ctgtcaaatttgtatccatgcaaaagagattctgcaaggatggtctttgtagatgtagcc 71688
Query: 712 aggcagccaa 721
| |||||||
Sbjct: 71687 aaacagccaa 71678
Score = 48.1 bits (24), Expect = 0.002
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 1045 gctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatcc 1104
|||||||||| |||||||| |||||||| ||||| || | || || ||||||||||||
Sbjct: 71254 gctccaatggctgagcagataaagtggacacaggatactgataggggaaacttgaaatcc 71195
Query: 1105 agtttctg 1112
| ||||||
Sbjct: 71194 aatttctg 71187
Score = 40.1 bits (20), Expect = 0.45
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 610 atcatggtggcaaagggtgccatgtagtacaccgtgttaatgct 653
|||||||| ||| | ||||||||||| || |||||||| |||||
Sbjct: 74804 atcatggtcgcataaggtgccatgtaataaaccgtgtttatgct 74761
>gb|CX520281.1|CX520281 s13dNF39G09VI072_444614 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 560
Score = 67.9 bits (34), Expect = 2e-009
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 610 atcatggtggcaaagggtgccatgtagtacaccgtgttaatgctgtcaaacttgtatcca 669
|||||||| ||| | ||||||||||| || |||||||| ||||||||||| |||||||||
Sbjct: 86 atcatggtcgcataaggtgccatgtaataaaccgtgtttatgctgtcaaatttgtatcca 27
Query: 670 tg 671
||
Sbjct: 26 tg 25
Score = 52.0 bits (26), Expect = 1e-004
Identities = 77/94 (81%)
Strand = Plus / Minus
Query: 421 ttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaagatg 480
|||||||| || |||||||| || || || || || || || ||||| || || || |||
Sbjct: 275 ttaaggttcccagcaacgttaaatgttacagcagtagtggagtggatcacataaaaaatg 216
Query: 481 gagaagttaaggcagaacgcaagcacccccgaac 514
||||||||||| |||||||| |||||||| ||||
Sbjct: 215 gagaagttaagacagaacgccagcaccccagaac 182
>gb|AW560422.1|AW560422 EST315470 DSIR Medicago truncatula cDNA clone pDSIR-27E15, mRNA
sequence
Length = 594
Score = 52.0 bits (26), Expect = 1e-004
Identities = 77/94 (81%)
Strand = Plus / Minus
Query: 421 ttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaagatg 480
|||||||| || |||||||| || || || || || || || ||||| || || || |||
Sbjct: 241 ttaaggttcccagcaacgttaaatgttacagcagtagtggagtggatcacataaaaaatg 182
Query: 481 gagaagttaaggcagaacgcaagcacccccgaac 514
||||||||||| |||||||| |||||||| ||||
Sbjct: 181 gagaagttaagacagaacgccagcaccccagaac 148
>gb|CA918719.1|CA918719 EST636437 MTUS Medicago truncatula cDNA clone MTUS-2C10, mRNA
sequence
Length = 696
Score = 52.0 bits (26), Expect = 1e-004
Identities = 77/94 (81%)
Strand = Plus / Plus
Query: 421 ttaaggttgcctgcaacgttgaacgtcactgctgttgttgaatggatgacgtagaagatg 480
|||||||| || |||||||| || || || || || || || ||||| || || || |||
Sbjct: 486 ttaaggttcccagcaacgttaaatgttacagcagtagtggagtggatcacataaaaaatg 545
Query: 481 gagaagttaaggcagaacgcaagcacccccgaac 514
||||||||||| |||||||| |||||||| ||||
Sbjct: 546 gagaagttaagacagaacgccagcaccccagaac 579
>gb|BQ140404.1|BQ140404 NF035C06PH1F1050 Phoma-infected Medicago truncatula cDNA clone
NF035C06PH 5', mRNA sequence
Length = 322
Score = 44.1 bits (22), Expect = 0.029
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 1123 ttgttcatgatgatgacagtgacgttgaagccccacca 1160
||||||||||| ||||||||||| ||||| |||||||
Sbjct: 321 ttgttcatgataatgacagtgacattgaaagcccacca 284
>gb|AQ842291.1|AQ842291 T136261b shotgun sub-library of BAC clone 19N23 Medicago truncatula
genomic clone 19-N-23-045, DNA sequence
Length = 624
Score = 40.1 bits (20), Expect = 0.45
Identities = 56/68 (82%)
Strand = Plus / Plus
Query: 1045 gctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatcc 1104
|||||||||| |||||||| ||||||| ||||| || | || || ||||||||||||
Sbjct: 88 gctccaatggctgagcagataaagtggatacaggataccgataggggaaacttgaaatcc 147
Query: 1105 agtttctg 1112
| ||||||
Sbjct: 148 aatttctg 155
>emb|CR494929.1| mth2-168D12RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula,
genomic survey sequence
Length = 661
Score = 40.1 bits (20), Expect = 0.45
Identities = 56/68 (82%)
Strand = Plus / Minus
Query: 1045 gctccaatggaagagcagatgaagtggacgcaggacacggtgagagggaacttgaaatcc 1104
|||||||||| |||||||| ||||||| ||||| || | || || ||||||||||||
Sbjct: 656 gctccaatggctgagcagataaagtggatacaggataccgataggggaaacttgaaatcc 597
Query: 1105 agtttctg 1112
| ||||||
Sbjct: 596 aatttctg 589
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 272,865
Number of Sequences: 392609
Number of extensions: 272865
Number of successful extensions: 19491
Number of sequences better than 0.5: 26
Number of HSP's better than 0.5 without gapping: 24
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 19420
Number of HSP's gapped (non-prelim): 71
length of query: 1279
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1259
effective length of database: 433,880,813
effective search space: 546255943567
effective search space used: 546255943567
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)