BLASTN 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2430991.2.1
         (515 letters)

Database: Mt_nucl_with_EST.fasta 
           392,609 sequences; 441,732,993 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CG936601.1|CG936601  MBEEI37TFB mth2 Medicago truncatula ...    58   8e-007
gb|CG939602.1|CG939602  MBELA01TF mth2 Medicago truncatula g...    58   8e-007
gb|AL377152.1|AL377152  MtBB29F12F1 MtBB Medicago truncatula...    58   8e-007

>gb|CG936601.1|CG936601 MBEEI37TFB mth2 Medicago truncatula genomic clone 38G1, DNA
           sequence
          Length = 786

 Score = 58.0 bits (29), Expect = 8e-007
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                       
Query: 163 agtcattcatgccaaaccatgccttcatcggagcatagttcaactcatcagtcactaagt 222
           ||||||||||| ||||||| |||||||||| |||||| || |  |||||||| || | ||
Sbjct: 581 agtcattcatggcaaaccacgccttcatcgaagcataatttatttcatcagtgacaaggt 522

                    
Query: 223 gaaaaacaa 231
           |||||||||
Sbjct: 521 gaaaaacaa 513



>gb|CG939602.1|CG939602 MBELA01TF mth2 Medicago truncatula genomic clone 78A1, DNA sequence
          Length = 914

 Score = 58.0 bits (29), Expect = 8e-007
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                       
Query: 163 agtcattcatgccaaaccatgccttcatcggagcatagttcaactcatcagtcactaagt 222
           ||||||||||| ||||||| |||||||||| |||||| || |  |||||||| || | ||
Sbjct: 271 agtcattcatggcaaaccacgccttcatcgaagcataatttatttcatcagtgacaaggt 212

                    
Query: 223 gaaaaacaa 231
           |||||||||
Sbjct: 211 gaaaaacaa 203



>gb|AL377152.1|AL377152 MtBB29F12F1 MtBB Medicago truncatula cDNA clone MtBB29F12 T3, mRNA
           sequence
          Length = 427

 Score = 58.0 bits (29), Expect = 8e-007
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                       
Query: 163 agtcattcatgccaaaccatgccttcatcggagcatagttcaactcatcagtcactaagt 222
           ||||||||||| ||||||| |||||||||| |||||| || |  |||||||| || | ||
Sbjct: 213 agtcattcatggcaaaccacgccttcatcgaagcataatttatttcatcagtgacaaggt 154

                    
Query: 223 gaaaaacaa 231
           |||||||||
Sbjct: 153 gaaaaacaa 145



  Database: Mt_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:25 PM
  Number of letters in database: 441,732,993
  Number of sequences in database:  392,609
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 98,882
Number of Sequences: 392609
Number of extensions: 98882
Number of successful extensions: 7727
Number of sequences better than  0.5: 3
Number of HSP's better than  0.5 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7724
Number of HSP's gapped (non-prelim): 3
length of query: 515
length of database: 441,732,993
effective HSP length: 19
effective length of query: 496
effective length of database: 434,273,422
effective search space: 215399617312
effective search space used: 215399617312
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)