BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2418861.2.1
(614 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW559881.1|AW559881 EST314929 DSIR Medicago truncatula c... 94 2e-017
gb|BE322931.1|BE322931 NF025A06IN1F1038 Insect herbivory Me... 94 2e-017
gb|BF648256.1|BF648256 NF045H03EC1F1031 Elicited cell cultu... 94 2e-017
gb|BI271778.1|BI271778 NF019A05FL1F1036 Developing flower M... 94 2e-017
gb|BQ149414.1|BQ149414 NF090C02FL1F1018 Developing flower M... 94 2e-017
gb|BQ164947.1|BQ164947 EST610816 KVKC Medicago truncatula c... 94 2e-017
gb|CB891199.1|CB891199 EST648168 KV3 Medicago truncatula cD... 94 2e-017
gb|CB894252.1|CB894252 EST647044 HOGA Medicago truncatula c... 94 2e-017
gb|AA660590.1|AA660590 00476 MtRHE Medicago truncatula cDNA... 74 2e-011
gb|BG449351.1|BG449351 NF046F07IN1F1061 Insect herbivory Me... 72 6e-011
gb|AA660578.1|AA660578 00464 MtRHE Medicago truncatula cDNA... 70 2e-010
gb|AC142396.25| Medicago truncatula clone mth2-6g9, complet... 62 6e-008
gb|AI974638.1|AI974638 T113090e KV2 Medicago truncatula cDN... 56 4e-006
gb|AL371111.1|AL371111 MtBA42A01F1 MtBA Medicago truncatula... 52 6e-005
emb|CR485248.1| mth2-154K9RM2 BAC end, cultivar Jemalong A1... 48 9e-004
emb|CR313921.1| mte1-37A10RM1 BAC end, cultivar Jemalong A1... 44 0.014
>gb|AW559881.1|AW559881 EST314929 DSIR Medicago truncatula cDNA clone pDSIR-25B19, mRNA
sequence
Length = 500
Score = 93.7 bits (47), Expect = 2e-017
Identities = 116/139 (83%)
Strand = Plus / Plus
Query: 175 ccgtcgatgagtatgagaaatatcatggatactatggagggaaggaggaagcaaggaagt 234
||||||| |||||||||| ||||||| || ||||||||| | ||||| | ||||||
Sbjct: 173 ccgtcgacaagtatgagaagtatcatgcatcctatggaggtcaagaggatgaaaggaaag 232
Query: 235 ccaactatactgatatggttaataaatactatgatcttgccactagcttctatgagtatg 294
| || |||| |||||||||||||||||||||||||||||| || ||||| ||||| | ||
Sbjct: 233 ctaattatagtgatatggttaataaatactatgatcttgcgacaagcttttatgaatttg 292
Query: 295 gttggggtgaatccttcca 313
| ||||| ||||| |||||
Sbjct: 293 gctggggggaatctttcca 311
Score = 54.0 bits (27), Expect = 1e-005
Identities = 114/143 (79%)
Strand = Plus / Plus
Query: 351 agcatcaagcgacatgagcattttcttgccctgcaacttggtttgaaaccaggaatgaag 410
||||||||||||||||| || || ||||| | ||||||||| | | || ||| ||||
Sbjct: 349 agcatcaagcgacatgaacacttccttgctttacaacttggtcttacgcccggacagaag 408
Query: 411 gttttagatgtgggctgtggaataggtggaccactgagagaaattgcaagatttagctca 470
||||| ||||| || ||||| | || |||||| | ||||||||| || |||| |||||
Sbjct: 409 gttttggatgttggttgtggtcttggaggaccattaagagaaatttcacgattcagctcg 468
Query: 471 acttcagttaccggattgaataa 493
|| || ||||| |||||||||||
Sbjct: 469 acatctgttacaggattgaataa 491
>gb|BE322931.1|BE322931 NF025A06IN1F1038 Insect herbivory Medicago truncatula cDNA clone
NF025A06IN 5', mRNA sequence
Length = 660
Score = 93.7 bits (47), Expect = 2e-017
Identities = 116/139 (83%)
Strand = Plus / Plus
Query: 175 ccgtcgatgagtatgagaaatatcatggatactatggagggaaggaggaagcaaggaagt 234
||||||| |||||||||| ||||||| || ||||||||| | ||||| | ||||||
Sbjct: 108 ccgtcgacaagtatgagaagtatcatgcatcctatggaggtcaagaggatgaaaggaaag 167
Query: 235 ccaactatactgatatggttaataaatactatgatcttgccactagcttctatgagtatg 294
| || |||| |||||||||||||||||||||||||||||| || ||||| ||||| | ||
Sbjct: 168 ctaattatagtgatatggttaataaatactatgatcttgcgacaagcttttatgaatttg 227
Query: 295 gttggggtgaatccttcca 313
| ||||| ||||| |||||
Sbjct: 228 gctggggggaatctttcca 246
Score = 87.7 bits (44), Expect = 1e-015
Identities = 140/172 (81%)
Strand = Plus / Plus
Query: 351 agcatcaagcgacatgagcattttcttgccctgcaacttggtttgaaaccaggaatgaag 410
||||||||||||||||| || || ||||| | ||||||||| | | || ||| ||||
Sbjct: 284 agcatcaagcgacatgaacacttccttgctttacaacttggtcttacgcccggacagaag 343
Query: 411 gttttagatgtgggctgtggaataggtggaccactgagagaaattgcaagatttagctca 470
||||| ||||| || ||||| || || |||||| | ||||||||| || |||| |||||
Sbjct: 344 gttttggatgttggttgtggtattggaggaccattaagagaaatttcacgattcagctcg 403
Query: 471 acttcagttaccggattgaataacaacgaataccagataaccaggggaaagg 522
|| || ||||| ||||||||||| || || |||||||| |||||||||||||
Sbjct: 404 acatctgttacaggattgaataataatgagtaccagatcaccaggggaaagg 455
Score = 52.0 bits (26), Expect = 6e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 564 gtcaaggcggacttcatgaagatgccgttcgatgacaacacttttgatgc 613
|||||||| || |||||||||||||| ||||| ||||| | |||||||||
Sbjct: 497 gtcaaggctgatttcatgaagatgccattcgaagacaatagttttgatgc 546
>gb|BF648256.1|BF648256 NF045H03EC1F1031 Elicited cell culture Medicago truncatula cDNA
clone NF045H03EC 5', mRNA sequence
Length = 635
Score = 93.7 bits (47), Expect = 2e-017
Identities = 116/139 (83%)
Strand = Plus / Plus
Query: 175 ccgtcgatgagtatgagaaatatcatggatactatggagggaaggaggaagcaaggaagt 234
||||||| |||||||||| ||||||| || ||||||||| | ||||| | ||||||
Sbjct: 135 ccgtcgacaagtatgagaagtatcatgcatcctatggaggtcaagaggatgaaaggaaag 194
Query: 235 ccaactatactgatatggttaataaatactatgatcttgccactagcttctatgagtatg 294
| || |||| |||||||||||||||||||||||||||||| || ||||| ||||| | ||
Sbjct: 195 ctaattatagtgatatggttaataaatactatgatcttgcgacaagcttttatgaatttg 254
Query: 295 gttggggtgaatccttcca 313
| ||||| ||||| |||||
Sbjct: 255 gctggggggaatctttcca 273
Score = 87.7 bits (44), Expect = 1e-015
Identities = 140/172 (81%)
Strand = Plus / Plus
Query: 351 agcatcaagcgacatgagcattttcttgccctgcaacttggtttgaaaccaggaatgaag 410
||||||||||||||||| || || ||||| | ||||||||| | | || ||| ||||
Sbjct: 311 agcatcaagcgacatgaacacttccttgctttacaacttggtcttacgcccggacagaag 370
Query: 411 gttttagatgtgggctgtggaataggtggaccactgagagaaattgcaagatttagctca 470
||||| ||||| || ||||| || || |||||| | ||||||||| || |||| |||||
Sbjct: 371 gttttggatgttggttgtggtattggaggaccattaagagaaatttcacgattcagctcg 430
Query: 471 acttcagttaccggattgaataacaacgaataccagataaccaggggaaagg 522
|| || ||||| ||||||||||| || || |||||||| |||||||||||||
Sbjct: 431 acatctgttacaggattgaataataatgagtaccagatcaccaggggaaagg 482
Score = 52.0 bits (26), Expect = 6e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 564 gtcaaggcggacttcatgaagatgccgttcgatgacaacacttttgatgc 613
|||||||| || |||||||||||||| ||||| ||||| | |||||||||
Sbjct: 524 gtcaaggctgatttcatgaagatgccattcgaagacaatagttttgatgc 573
>gb|BI271778.1|BI271778 NF019A05FL1F1036 Developing flower Medicago truncatula cDNA clone
NF019A05FL 5', mRNA sequence
Length = 691
Score = 93.7 bits (47), Expect = 2e-017
Identities = 116/139 (83%)
Strand = Plus / Plus
Query: 175 ccgtcgatgagtatgagaaatatcatggatactatggagggaaggaggaagcaaggaagt 234
||||||| |||||||||| ||||||| || ||||||||| | ||||| | ||||||
Sbjct: 153 ccgtcgacaagtatgagaagtatcatgcatcctatggaggtcaagaggatgaaaggaaag 212
Query: 235 ccaactatactgatatggttaataaatactatgatcttgccactagcttctatgagtatg 294
| || |||| |||||||||||||||||||||||||||||| || ||||| ||||| | ||
Sbjct: 213 ctaattatagtgatatggttaataaatactatgatcttgcgacaagcttttatgaatttg 272
Query: 295 gttggggtgaatccttcca 313
| ||||| ||||| |||||
Sbjct: 273 gctggggggaatctttcca 291
Score = 87.7 bits (44), Expect = 1e-015
Identities = 140/172 (81%)
Strand = Plus / Plus
Query: 351 agcatcaagcgacatgagcattttcttgccctgcaacttggtttgaaaccaggaatgaag 410
||||||||||||||||| || || ||||| | ||||||||| | | || ||| ||||
Sbjct: 329 agcatcaagcgacatgaacacttccttgctttacaacttggtcttacgcccggacagaag 388
Query: 411 gttttagatgtgggctgtggaataggtggaccactgagagaaattgcaagatttagctca 470
||||| ||||| || ||||| || || |||||| | ||||||||| || |||| |||||
Sbjct: 389 gttttggatgttggttgtggtattggaggaccattaagagaaatttcacgattcagctcg 448
Query: 471 acttcagttaccggattgaataacaacgaataccagataaccaggggaaagg 522
|| || ||||| ||||||||||| || || |||||||| |||||||||||||
Sbjct: 449 acatctgttacaggattgaataataatgagtaccagatcaccaggggaaagg 500
Score = 52.0 bits (26), Expect = 6e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 564 gtcaaggcggacttcatgaagatgccgttcgatgacaacacttttgatgc 613
|||||||| || |||||||||||||| ||||| ||||| | |||||||||
Sbjct: 542 gtcaaggctgatttcatgaagatgccattcgaagacaatagttttgatgc 591
>gb|BQ149414.1|BQ149414 NF090C02FL1F1018 Developing flower Medicago truncatula cDNA clone
NF090C02FL 5', mRNA sequence
Length = 390
Score = 93.7 bits (47), Expect = 2e-017
Identities = 116/139 (83%)
Strand = Plus / Plus
Query: 175 ccgtcgatgagtatgagaaatatcatggatactatggagggaaggaggaagcaaggaagt 234
||||||| |||||||||| ||||||| || ||||||||| | ||||| | ||||||
Sbjct: 127 ccgtcgacaagtatgagaagtatcatgcatcctatggaggtcaagaggatgaaaggaaag 186
Query: 235 ccaactatactgatatggttaataaatactatgatcttgccactagcttctatgagtatg 294
| || |||| |||||||||||||||||||||||||||||| || ||||| ||||| | ||
Sbjct: 187 ctaattatagtgatatggttaataaatactatgatcttgcgacaagcttttatgaatttg 246
Query: 295 gttggggtgaatccttcca 313
| ||||| ||||| |||||
Sbjct: 247 gctggggggaatctttcca 265
>gb|BQ164947.1|BQ164947 EST610816 KVKC Medicago truncatula cDNA clone pKVKC-3H9, mRNA
sequence
Length = 788
Score = 93.7 bits (47), Expect = 2e-017
Identities = 116/139 (83%)
Strand = Plus / Plus
Query: 175 ccgtcgatgagtatgagaaatatcatggatactatggagggaaggaggaagcaaggaagt 234
||||||| |||||||||| ||||||| || ||||||||| | ||||| | ||||||
Sbjct: 206 ccgtcgacaagtatgagaagtatcatgcatcctatggaggtcaagaggatgaaaggaaag 265
Query: 235 ccaactatactgatatggttaataaatactatgatcttgccactagcttctatgagtatg 294
| || |||| |||||||||||||||||||||||||||||| || ||||| ||||| | ||
Sbjct: 266 ctaattatagtgatatggttaataaatactatgatcttgcgacaagcttttatgaatttg 325
Query: 295 gttggggtgaatccttcca 313
| ||||| ||||| |||||
Sbjct: 326 gctggggggaatctttcca 344
Score = 87.7 bits (44), Expect = 1e-015
Identities = 140/172 (81%)
Strand = Plus / Plus
Query: 351 agcatcaagcgacatgagcattttcttgccctgcaacttggtttgaaaccaggaatgaag 410
||||||||||||||||| || || ||||| | ||||||||| | | || ||| ||||
Sbjct: 382 agcatcaagcgacatgaacacttccttgctttacaacttggtcttacgcccggacagaag 441
Query: 411 gttttagatgtgggctgtggaataggtggaccactgagagaaattgcaagatttagctca 470
||||| ||||| || ||||| || || |||||| | ||||||||| || |||| |||||
Sbjct: 442 gttttggatgttggttgtggtattggaggaccattaagagaaatttcacgattcagctcg 501
Query: 471 acttcagttaccggattgaataacaacgaataccagataaccaggggaaagg 522
|| || ||||| ||||||||||| || || |||||||| |||||||||||||
Sbjct: 502 acatctgttacaggattgaataataatgagtaccagatcaccaggggaaagg 553
Score = 52.0 bits (26), Expect = 6e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 564 gtcaaggcggacttcatgaagatgccgttcgatgacaacacttttgatgc 613
|||||||| || |||||||||||||| ||||| ||||| | |||||||||
Sbjct: 595 gtcaaggctgatttcatgaagatgccattcgaagacaatagttttgatgc 644
>gb|CB891199.1|CB891199 EST648168 KV3 Medicago truncatula cDNA clone KV3-49B3, mRNA
sequence
Length = 624
Score = 93.7 bits (47), Expect = 2e-017
Identities = 116/139 (83%)
Strand = Plus / Plus
Query: 175 ccgtcgatgagtatgagaaatatcatggatactatggagggaaggaggaagcaaggaagt 234
||||||| |||||||||| ||||||| || ||||||||| | ||||| | ||||||
Sbjct: 39 ccgtcgacaagtatgagaagtatcatgcatcctatggaggtcaagaggatgaaaggaaag 98
Query: 235 ccaactatactgatatggttaataaatactatgatcttgccactagcttctatgagtatg 294
| || |||| |||||||||||||||||||||||||||||| || ||||| ||||| | ||
Sbjct: 99 ctaattatagtgatatggttaataaatactatgatcttgcgacaagcttttatgaatttg 158
Query: 295 gttggggtgaatccttcca 313
| ||||| ||||| |||||
Sbjct: 159 gctggggggaatctttcca 177
Score = 87.7 bits (44), Expect = 1e-015
Identities = 140/172 (81%)
Strand = Plus / Plus
Query: 351 agcatcaagcgacatgagcattttcttgccctgcaacttggtttgaaaccaggaatgaag 410
||||||||||||||||| || || ||||| | ||||||||| | | || ||| ||||
Sbjct: 215 agcatcaagcgacatgaacacttccttgctttacaacttggtcttacgcccggacagaag 274
Query: 411 gttttagatgtgggctgtggaataggtggaccactgagagaaattgcaagatttagctca 470
||||| ||||| || ||||| || || |||||| | ||||||||| || |||| |||||
Sbjct: 275 gttttggatgttggttgtggtattggaggaccattaagagaaatttcacgattcagctcg 334
Query: 471 acttcagttaccggattgaataacaacgaataccagataaccaggggaaagg 522
|| || ||||| ||||||||||| || || |||||||| |||||||||||||
Sbjct: 335 acatctgttacaggattgaataataatgagtaccagatcaccaggggaaagg 386
Score = 52.0 bits (26), Expect = 6e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 564 gtcaaggcggacttcatgaagatgccgttcgatgacaacacttttgatgc 613
|||||||| || |||||||||||||| ||||| ||||| | |||||||||
Sbjct: 428 gtcaaggctgatttcatgaagatgccattcgaagacaatagttttgatgc 477
>gb|CB894252.1|CB894252 EST647044 HOGA Medicago truncatula cDNA clone HOGA-30H7, mRNA
sequence
Length = 792
Score = 93.7 bits (47), Expect = 2e-017
Identities = 116/139 (83%)
Strand = Plus / Plus
Query: 175 ccgtcgatgagtatgagaaatatcatggatactatggagggaaggaggaagcaaggaagt 234
||||||| |||||||||| ||||||| || ||||||||| | ||||| | ||||||
Sbjct: 83 ccgtcgacaagtatgagaagtatcatgcatcctatggaggtcaagaggatgaaaggaaag 142
Query: 235 ccaactatactgatatggttaataaatactatgatcttgccactagcttctatgagtatg 294
| || |||| |||||||||||||||||||||||||||||| || ||||| ||||| | ||
Sbjct: 143 ctaattatagtgatatggttaataaatactatgatcttgcgacaagcttttatgaatttg 202
Query: 295 gttggggtgaatccttcca 313
| ||||| ||||| |||||
Sbjct: 203 gctggggggaatctttcca 221
Score = 42.1 bits (21), Expect = 0.054
Identities = 84/105 (80%)
Strand = Plus / Plus
Query: 351 agcatcaagcgacatgagcattttcttgccctgcaacttggtttgaaaccaggaatgaag 410
||||||||||||||||| || || ||||| | ||||||||| | | || ||| ||||
Sbjct: 259 agcatcaagcgacatgaacacttccttgctttacaacttggtcttacgcccggacagaag 318
Query: 411 gttttagatgtgggctgtggaataggtggaccactgagagaaatt 455
||||| ||||| || ||||| || || |||||| | |||||||||
Sbjct: 319 gttttggatgttggttgtggtattggaggaccattaagagaaatt 363
>gb|AA660590.1|AA660590 00476 MtRHE Medicago truncatula cDNA 5' similar to
delta24-sterol-methyltransferase, mRNA sequence
Length = 555
Score = 73.8 bits (37), Expect = 2e-011
Identities = 96/116 (82%)
Strand = Plus / Plus
Query: 407 gaaggttttagatgtgggctgtggaataggtggaccactgagagaaattgcaagatttag 466
||||||||| ||||| || ||||| || || |||||| | ||||||||| || |||| ||
Sbjct: 21 gaaggttttggatgttggttgtggtattggaggaccattaagagaaatttcacgattcag 80
Query: 467 ctcaacttcagttaccggattgaataacaacgaataccagataaccaggggaaagg 522
||| || || ||||| ||||||||||| || || |||||||| |||| ||||||||
Sbjct: 81 ctcgacatctgttacaggattgaataataatgagtaccagatcaccangggaaagg 136
Score = 52.0 bits (26), Expect = 6e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 564 gtcaaggcggacttcatgaagatgccgttcgatgacaacacttttgatgc 613
|||||||| || |||||||||||||| ||||| ||||| | |||||||||
Sbjct: 178 gtcaaggctgatttcatgaagatgccattcgaagacaatagttttgatgc 227
>gb|BG449351.1|BG449351 NF046F07IN1F1061 Insect herbivory Medicago truncatula cDNA clone
NF046F07IN 5', mRNA sequence
Length = 670
Score = 71.9 bits (36), Expect = 6e-011
Identities = 93/112 (83%)
Strand = Plus / Plus
Query: 411 gttttagatgtgggctgtggaataggtggaccactgagagaaattgcaagatttagctca 470
||||| ||||| || ||||| || || |||||| | ||||||||| || |||| |||||
Sbjct: 1 gttttggatgttggttgtggtattggaggaccattaagagaaatttcacgattcagctcg 60
Query: 471 acttcagttaccggattgaataacaacgaataccagataaccaggggaaagg 522
|| || ||||| ||||||||||| || || |||||||| |||||||||||||
Sbjct: 61 acatctgttacaggattgaataataatgagtaccagatcaccaggggaaagg 112
Score = 52.0 bits (26), Expect = 6e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 564 gtcaaggcggacttcatgaagatgccgttcgatgacaacacttttgatgc 613
|||||||| || |||||||||||||| ||||| ||||| | |||||||||
Sbjct: 154 gtcaaggctgatttcatgaagatgccattcgaagacaatagttttgatgc 203
>gb|AA660578.1|AA660578 00464 MtRHE Medicago truncatula cDNA 5' similar to
delta24-sterol-methyltransferase, mRNA sequence
Length = 576
Score = 69.9 bits (35), Expect = 2e-010
Identities = 92/111 (82%)
Strand = Plus / Plus
Query: 407 gaaggttttagatgtgggctgtggaataggtggaccactgagagaaattgcaagatttag 466
||||||||| ||||| || ||||| || || |||||| | ||||||||| || |||| ||
Sbjct: 21 gaaggttttggatgttggttgtggtattggaggaccattaagagaaatttcacgattcag 80
Query: 467 ctcaacttcagttaccggattgaataacaacgaataccagataaccagggg 517
||| || || ||||| ||||||||||| || || |||||||| ||||||||
Sbjct: 81 ctcgacatctgttacaggattgaataataatgagtaccagatcaccagggg 131
>gb|AC142396.25| Medicago truncatula clone mth2-6g9, complete sequence
Length = 106058
Score = 61.9 bits (31), Expect = 6e-008
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 251 ggttaataaatactatgatcttgccactagcttctatgagtatggttggggtgaatcctt 310
|||||||||||||||||||||||| || ||||| ||||| | ||| ||||| ||||| ||
Sbjct: 54552 ggttaataaatactatgatcttgcgacaagcttttatgaatttggctggggggaatcttt 54611
Query: 311 cca 313
|||
Sbjct: 54612 cca 54614
Score = 52.0 bits (26), Expect = 6e-005
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 477 gttaccggattgaataacaacgaataccagataaccaggggaaagg 522
||||| ||||||||||| || || |||||||| |||||||||||||
Sbjct: 55416 gttacaggattgaataataatgagtaccagatcaccaggggaaagg 55461
Score = 44.1 bits (22), Expect = 0.014
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 576 ttcatgaagatgccgttcgatgacaacacttttgatgc 613
|||||||||||||| ||||| ||||| | |||||||||
Sbjct: 56688 ttcatgaagatgccattcgaagacaatagttttgatgc 56725
>gb|AI974638.1|AI974638 T113090e KV2 Medicago truncatula cDNA clone pKV2-1E5, mRNA sequence
Length = 362
Score = 56.0 bits (28), Expect = 4e-006
Identities = 82/100 (82%)
Strand = Plus / Plus
Query: 175 ccgtcgatgagtatgagaaatatcatggatactatggagggaaggaggaagcaaggaagt 234
||||||| |||||||||| ||||||| || ||||||||| | ||||| | ||||||
Sbjct: 256 ccgtcgacaagtatgagaagtatcatgcatcctatggaggtcaagaggatgaaaggaaag 315
Query: 235 ccaactatactgatatggttaataaatactatgatcttgc 274
| || |||| |||||||||||||||| |||||||||||
Sbjct: 316 ctaattatagtgatatggttaataaaacttatgatcttgc 355
>gb|AL371111.1|AL371111 MtBA42A01F1 MtBA Medicago truncatula cDNA clone MtBA42A01 T3, mRNA
sequence
Length = 489
Score = 52.0 bits (26), Expect = 6e-005
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 564 gtcaaggcggacttcatgaagatgccgttcgatgacaacacttttgatgc 613
|||||||| || |||||||||||||| ||||| ||||| | |||||||||
Sbjct: 30 gtcaaggctgatttcatgaagatgccattcgaagacaatagttttgatgc 79
>emb|CR485248.1| mth2-154K9RM2 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 666
Score = 48.1 bits (24), Expect = 9e-004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 251 ggttaataaatactatgatcttgc 274
||||||||||||||||||||||||
Sbjct: 32 ggttaataaatactatgatcttgc 9
>emb|CR313921.1| mte1-37A10RM1 BAC end, cultivar Jemalong A17 of Medicago
truncatula, genomic survey sequence
Length = 554
Score = 44.1 bits (22), Expect = 0.014
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 576 ttcatgaagatgccgttcgatgacaacacttttgatgc 613
|||||||||||||| ||||| ||||| | |||||||||
Sbjct: 158 ttcatgaagatgccattcgaagacaatagttttgatgc 195
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 126,913
Number of Sequences: 392609
Number of extensions: 126913
Number of successful extensions: 9049
Number of sequences better than 0.5: 16
Number of HSP's better than 0.5 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9002
Number of HSP's gapped (non-prelim): 41
length of query: 614
length of database: 441,732,993
effective HSP length: 19
effective length of query: 595
effective length of database: 434,273,422
effective search space: 258392686090
effective search space used: 258392686090
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)