BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2405245.2.2
(616 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE322341.2|BE322341 NF023F09IN1F1076 Insect herbivory Me... 64 1e-008
gb|BG449700.1|BG449700 NF007A05IN1F1034 Insect herbivory Me... 64 1e-008
gb|BG588904.1|BG588904 EST490713 MHRP- Medicago truncatula ... 64 1e-008
gb|BQ123483.1|BQ123483 EST609059 GLSD Medicago truncatula c... 64 1e-008
gb|BQ148186.1|BQ148186 NF062E08FL1F1067 Developing flower M... 64 1e-008
gb|CA989901.1|CA989901 EST643409 GESD Medicago truncatula c... 64 1e-008
gb|CA919692.1|CA919692 EST637410 MTUS Medicago truncatula c... 64 1e-008
gb|CX531934.1|CX531934 s13dNF83E05MJ035_257809 Methyl Jasmo... 64 1e-008
gb|AC146785.12| Medicago truncatula clone mth2-4h4, complet... 64 1e-008
gb|BE321671.2|BE321671 NF023F09IN1F1075 Insect herbivory Me... 56 4e-006
gb|AW687817.2|AW687817 NF013G09RT1F1071 Developing root Med... 50 2e-004
gb|BI307993.1|BI307993 EST529403 GPOD Medicago truncatula c... 48 9e-004
gb|AL365839.1|AL365839 MtBA02F11R2 MtBA Medicago truncatula... 42 0.054
gb|AL368205.1|AL368205 MtBA22H01R1 MtBA Medicago truncatula... 42 0.054
gb|AL371151.1|AL371151 MtBA42B12R1 MtBA Medicago truncatula... 42 0.054
gb|AL371272.1|AL371272 MtBA43A02R1 MtBA Medicago truncatula... 42 0.054
gb|AL374324.1|AL374324 MtBB05H11R1 MtBB Medicago truncatula... 42 0.054
gb|AL384921.1|AL384921 MtBC25C11R1 MtBC Medicago truncatula... 42 0.054
gb|AL386547.1|AL386547 MtBC35C12R1 MtBC Medicago truncatula... 42 0.054
gb|BF519981.1|BF519981 EST457449 DSIL Medicago truncatula c... 42 0.054
gb|AW694986.2|AW694986 NF082B10ST1F1080 Developing stem Med... 42 0.054
gb|BG583007.1|BG583007 EST484746 GVN Medicago truncatula cD... 42 0.054
gb|BG644673.1|BG644673 EST506292 KV3 Medicago truncatula cD... 42 0.054
gb|BG645686.1|BG645686 EST507305 KV3 Medicago truncatula cD... 42 0.054
gb|BI267782.1|BI267782 NF111B05IN1F1045 Insect herbivory Me... 42 0.054
gb|BI310552.1|BI310552 EST5312302 GESD Medicago truncatula ... 42 0.054
gb|BI311182.1|BI311182 EST5312932 GESD Medicago truncatula ... 42 0.054
gb|BM779301.1|BM779301 EST589864 KV2 Medicago truncatula cD... 42 0.054
gb|BM779743.1|BM779743 EST590319 KV2 Medicago truncatula cD... 42 0.054
gb|BQ164838.1|BQ164838 EST610707 KVKC Medicago truncatula c... 42 0.054
gb|BQ165438.1|BQ165438 EST611307 KVKC Medicago truncatula c... 42 0.054
gb|CA919585.1|CA919585 EST637303 MTUS Medicago truncatula c... 42 0.054
gb|CA920966.1|CA920966 EST638684 MTUS Medicago truncatula c... 42 0.054
gb|AJ845606.1|AJ845606 AJ845606 MtSNF Medicago truncatula c... 42 0.054
gb|CX523854.1|CX523854 s13dNF05G09AT072_440106 Aphid-Infect... 42 0.054
gb|CX538617.1|CX538617 s13dNF81E10GS071_460486 Germinating ... 42 0.054
gb|AC144618.7| Medicago truncatula clone mth2-21d12, comple... 42 0.054
gb|AC119411.16| Medicago truncatula clone mth2-23c14, compl... 42 0.054
gb|AW736147.1|AW736147 EST332133 KV3 Medicago truncatula cD... 40 0.21
>gb|BE322341.2|BE322341 NF023F09IN1F1076 Insect herbivory Medicago truncatula cDNA clone
NF023F09IN 5', mRNA sequence
Length = 494
Score = 63.9 bits (32), Expect = 1e-008
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 93 tgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaacatgcaga 152
|||||||||||||||||||||||| ||| || ||||| || | || |||||||||||||
Sbjct: 266 tgaccgagtgggacgagttcaagaaccttgattaccaaaaagtttttgacaacatgcaga 325
Query: 153 agcc 156
||||
Sbjct: 326 agcc 329
>gb|BG449700.1|BG449700 NF007A05IN1F1034 Insect herbivory Medicago truncatula cDNA clone
NF007A05IN 5', mRNA sequence
Length = 639
Score = 63.9 bits (32), Expect = 1e-008
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 93 tgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaacatgcaga 152
|||||||||||||||||||||||| ||| || ||||| || | || |||||||||||||
Sbjct: 177 tgaccgagtgggacgagttcaagaaccttgattaccaaaaagtttttgacaacatgcaga 236
Query: 153 agcc 156
||||
Sbjct: 237 agcc 240
>gb|BG588904.1|BG588904 EST490713 MHRP- Medicago truncatula cDNA clone pMHRP-57L4, mRNA
sequence
Length = 796
Score = 63.9 bits (32), Expect = 1e-008
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 93 tgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaacatgcaga 152
|||||||||||||||||||||||| ||| || ||||| || | || |||||||||||||
Sbjct: 276 tgaccgagtgggacgagttcaagaaccttgattaccaaaaagtttttgacaacatgcaga 335
Query: 153 agcc 156
||||
Sbjct: 336 agcc 339
>gb|BQ123483.1|BQ123483 EST609059 GLSD Medicago truncatula cDNA clone pGLSD-32M18, mRNA
sequence
Length = 377
Score = 63.9 bits (32), Expect = 1e-008
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 93 tgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaacatgcaga 152
|||||||||||||||||||||||| ||| || ||||| || | || |||||||||||||
Sbjct: 292 tgaccgagtgggacgagttcaagaaccttgattaccaaaaagtttttgacaacatgcaga 351
Query: 153 agcc 156
||||
Sbjct: 352 agcc 355
>gb|BQ148186.1|BQ148186 NF062E08FL1F1067 Developing flower Medicago truncatula cDNA clone
NF062E08FL 5', mRNA sequence
Length = 628
Score = 63.9 bits (32), Expect = 1e-008
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 93 tgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaacatgcaga 152
|||||||||||||||||||||||| ||| || ||||| || | || |||||||||||||
Sbjct: 222 tgaccgagtgggacgagttcaagaaccttgattaccaaaaagtttttgacaacatgcaga 281
Query: 153 agcc 156
||||
Sbjct: 282 agcc 285
>gb|CA989901.1|CA989901 EST643409 GESD Medicago truncatula cDNA clone GESD-21L17, mRNA
sequence
Length = 700
Score = 63.9 bits (32), Expect = 1e-008
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 93 tgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaacatgcaga 152
|||||||||||||||||||||||| ||| || ||||| || | || |||||||||||||
Sbjct: 336 tgaccgagtgggacgagttcaagaaccttgattaccaaaaagtttttgacaacatgcaga 395
Query: 153 agcc 156
||||
Sbjct: 396 agcc 399
>gb|CA919692.1|CA919692 EST637410 MTUS Medicago truncatula cDNA clone MTUS-16G1, mRNA
sequence
Length = 651
Score = 63.9 bits (32), Expect = 1e-008
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 93 tgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaacatgcaga 152
|||||||||||||||||||||||| ||| || ||||| || | || |||||||||||||
Sbjct: 510 tgaccgagtgggacgagttcaagaaccttgattaccaaaaagtttttgacaacatgcaga 451
Query: 153 agcc 156
||||
Sbjct: 450 agcc 447
>gb|CX531934.1|CX531934 s13dNF83E05MJ035_257809 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 640
Score = 63.9 bits (32), Expect = 1e-008
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 93 tgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaacatgcaga 152
|||||||||||||||||||||||| ||| || ||||| || | || |||||||||||||
Sbjct: 517 tgaccgagtgggacgagttcaagaaccttgattaccaaaaagtttttgacaacatgcaga 458
Query: 153 agcc 156
||||
Sbjct: 457 agcc 454
>gb|AC146785.12| Medicago truncatula clone mth2-4h4, complete sequence
Length = 149005
Score = 63.9 bits (32), Expect = 1e-008
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 93 tgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaacatgcaga 152
|||||||||||||||||||||||| ||| || ||||| || | || |||||||||||||
Sbjct: 70647 tgaccgagtgggacgagttcaagaaccttgattaccaaaaagtttttgacaacatgcaga 70706
Query: 153 agcc 156
||||
Sbjct: 70707 agcc 70710
>gb|BE321671.2|BE321671 NF023F09IN1F1075 Insect herbivory Medicago truncatula cDNA clone
NF023F09IN 5', mRNA sequence
Length = 347
Score = 56.0 bits (28), Expect = 4e-006
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 93 tgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaacatgcaga 152
|||||||||||||||||||||||| ||| || ||||| || | || ||||||||||| |
Sbjct: 266 tgaccgagtgggacgagttcaagaaccttgattaccaaaaagtttttgacaacatgcaaa 325
Query: 153 agcc 156
||||
Sbjct: 326 agcc 329
>gb|AW687817.2|AW687817 NF013G09RT1F1071 Developing root Medicago truncatula cDNA clone
NF013G09RT 5', mRNA sequence
Length = 588
Score = 50.1 bits (25), Expect = 2e-004
Identities = 49/57 (85%)
Strand = Plus / Plus
Query: 100 gtgggacgagttcaagaccctggactaccagaagatcttcgacaacatgcagaagcc 156
||||||||||||||||| ||| || ||||| || | || |||||||||||||||||
Sbjct: 492 gtgggacgagttcaagaaccttgattaccaaaaagtttttgacaacatgcagaagcc 548
>gb|BI307993.1|BI307993 EST529403 GPOD Medicago truncatula cDNA clone pGPOD-1F22 5' end,
mRNA sequence
Length = 795
Score = 48.1 bits (24), Expect = 9e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 tgaccgagtgggacgagttcaaga 116
||||||||||||||||||||||||
Sbjct: 768 tgaccgagtgggacgagttcaaga 791
>gb|AL365839.1|AL365839 MtBA02F11R2 MtBA Medicago truncatula cDNA clone MtBA02F11 T7, mRNA
sequence
Length = 548
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 94 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 153
Query: 146 atgca 150
|||||
Sbjct: 154 atgca 158
>gb|AL368205.1|AL368205 MtBA22H01R1 MtBA Medicago truncatula cDNA clone MtBA22H01 T7, mRNA
sequence
Length = 515
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 43 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 102
Query: 146 atgca 150
|||||
Sbjct: 103 atgca 107
>gb|AL371151.1|AL371151 MtBA42B12R1 MtBA Medicago truncatula cDNA clone MtBA42B12 T7, mRNA
sequence
Length = 528
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 39 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 98
Query: 146 atgca 150
|||||
Sbjct: 99 atgca 103
>gb|AL371272.1|AL371272 MtBA43A02R1 MtBA Medicago truncatula cDNA clone MtBA43A02 T7, mRNA
sequence
Length = 502
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 40 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 99
Query: 146 atgca 150
|||||
Sbjct: 100 atgca 104
>gb|AL374324.1|AL374324 MtBB05H11R1 MtBB Medicago truncatula cDNA clone MtBB05H11 T7, mRNA
sequence
Length = 497
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 46 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 105
Query: 146 atgca 150
|||||
Sbjct: 106 atgca 110
>gb|AL384921.1|AL384921 MtBC25C11R1 MtBC Medicago truncatula cDNA clone MtBC25C11 T7, mRNA
sequence
Length = 522
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 70 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 129
Query: 146 atgca 150
|||||
Sbjct: 130 atgca 134
>gb|AL386547.1|AL386547 MtBC35C12R1 MtBC Medicago truncatula cDNA clone MtBC35C12 T7, mRNA
sequence
Length = 527
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 75 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 134
Query: 146 atgca 150
|||||
Sbjct: 135 atgca 139
>gb|BF519981.1|BF519981 EST457449 DSIL Medicago truncatula cDNA clone pDSIL-22E10, mRNA
sequence
Length = 591
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 425 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 484
Query: 146 atgca 150
|||||
Sbjct: 485 atgca 489
>gb|AW694986.2|AW694986 NF082B10ST1F1080 Developing stem Medicago truncatula cDNA clone
NF082B10ST 5', mRNA sequence
Length = 608
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 502 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 561
Query: 146 atgca 150
|||||
Sbjct: 562 atgca 566
>gb|BG583007.1|BG583007 EST484746 GVN Medicago truncatula cDNA clone pGVN-71G16 5' end,
mRNA sequence
Length = 475
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 3 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 62
Query: 146 atgca 150
|||||
Sbjct: 63 atgca 67
>gb|BG644673.1|BG644673 EST506292 KV3 Medicago truncatula cDNA clone pKV3-37P22 5' end,
mRNA sequence
Length = 725
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 454 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 395
Query: 146 atgca 150
|||||
Sbjct: 394 atgca 390
>gb|BG645686.1|BG645686 EST507305 KV3 Medicago truncatula cDNA clone pKV3-47C19 5' end,
mRNA sequence
Length = 827
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 435 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 376
Query: 146 atgca 150
|||||
Sbjct: 375 atgca 371
>gb|BI267782.1|BI267782 NF111B05IN1F1045 Insect herbivory Medicago truncatula cDNA clone
NF111B05IN 5', mRNA sequence
Length = 664
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 443 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 384
Query: 146 atgca 150
|||||
Sbjct: 383 atgca 379
>gb|BI310552.1|BI310552 EST5312302 GESD Medicago truncatula cDNA clone pGESD8K12 5' end,
mRNA sequence
Length = 671
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 238 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 297
Query: 146 atgca 150
|||||
Sbjct: 298 atgca 302
>gb|BI311182.1|BI311182 EST5312932 GESD Medicago truncatula cDNA clone pGESD10M1 5' end,
mRNA sequence
Length = 780
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 164 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 223
Query: 146 atgca 150
|||||
Sbjct: 224 atgca 228
>gb|BM779301.1|BM779301 EST589864 KV2 Medicago truncatula cDNA clone pKV2-51F7, mRNA
sequence
Length = 518
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 421 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 362
Query: 146 atgca 150
|||||
Sbjct: 361 atgca 357
>gb|BM779743.1|BM779743 EST590319 KV2 Medicago truncatula cDNA clone pKV2-52N18, mRNA
sequence
Length = 757
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 423 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 364
Query: 146 atgca 150
|||||
Sbjct: 363 atgca 359
>gb|BQ164838.1|BQ164838 EST610707 KVKC Medicago truncatula cDNA clone pKVKC-2A12, mRNA
sequence
Length = 783
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 434 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 375
Query: 146 atgca 150
|||||
Sbjct: 374 atgca 370
>gb|BQ165438.1|BQ165438 EST611307 KVKC Medicago truncatula cDNA clone pKVKC-9B11, mRNA
sequence
Length = 664
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 455 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 396
Query: 146 atgca 150
|||||
Sbjct: 395 atgca 391
>gb|CA919585.1|CA919585 EST637303 MTUS Medicago truncatula cDNA clone MTUS-15E1, mRNA
sequence
Length = 615
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 406 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 347
Query: 146 atgca 150
|||||
Sbjct: 346 atgca 342
>gb|CA920966.1|CA920966 EST638684 MTUS Medicago truncatula cDNA clone MTUS-34E3, mRNA
sequence
Length = 763
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 406 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 347
Query: 146 atgca 150
|||||
Sbjct: 346 atgca 342
>gb|AJ845606.1|AJ845606 AJ845606 MtSNF Medicago truncatula cDNA clone MtNF07O13N1, mRNA
sequence
Length = 582
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 338 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 397
Query: 146 atgca 150
|||||
Sbjct: 398 atgca 402
>gb|CX523854.1|CX523854 s13dNF05G09AT072_440106 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 550
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Minus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 434 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 375
Query: 146 atgca 150
|||||
Sbjct: 374 atgca 370
>gb|CX538617.1|CX538617 s13dNF81E10GS071_460486 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 541
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 87 tgcattctgactgaatgggatgagttcaagacacttgagtaccagaggatttacgagaac 146
Query: 146 atgca 150
|||||
Sbjct: 147 atgca 151
>gb|AC144618.7| Medicago truncatula clone mth2-21d12, complete sequence
Length = 106554
Score = 42.1 bits (21), Expect = 0.054
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 570 gatatgttctttttgcagaat 590
|||||||||||||||||||||
Sbjct: 21947 gatatgttctttttgcagaat 21967
>gb|AC119411.16| Medicago truncatula clone mth2-23c14, complete sequence
Length = 106790
Score = 42.1 bits (21), Expect = 0.054
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 73162 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 73221
Query: 146 atgca 150
|||||
Sbjct: 73222 atgca 73226
>gb|AW736147.1|AW736147 EST332133 KV3 Medicago truncatula cDNA clone pKV3-5B8, mRNA
sequence
Length = 542
Score = 40.1 bits (20), Expect = 0.21
Identities = 53/64 (82%)
Strand = Plus / Plus
Query: 86 tgcatcctgaccgagtgggacgagttcaagaccctggactaccagaagatcttcgacaac 145
||||| ||||| || ||||| ||||||||||| || || ||||||| ||| | ||| |||
Sbjct: 479 tgcattctgactgaatgggatgagttcaagacacttgattaccagaggatttacgagaac 538
Query: 146 atgc 149
||||
Sbjct: 539 atgc 542
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 99,092
Number of Sequences: 392609
Number of extensions: 99092
Number of successful extensions: 6713
Number of sequences better than 0.5: 39
Number of HSP's better than 0.5 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6647
Number of HSP's gapped (non-prelim): 66
length of query: 616
length of database: 441,732,993
effective HSP length: 19
effective length of query: 597
effective length of database: 434,273,422
effective search space: 259261232934
effective search space used: 259261232934
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)