BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404801.2.2
(1076 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG582103.1|BG582103 EST483841 GVN Medicago truncatula cD... 129 5e-028
gb|AL374004.1|AL374004 MtBB04B02F1 MtBB Medicago truncatula... 127 2e-027
gb|BI266886.1|BI266886 NF094H07IN1F1064 Insect herbivory Me... 127 2e-027
gb|CB893980.1|CB893980 EST646772 HOGA Medicago truncatula c... 119 5e-025
gb|BQ124258.1|BQ124258 EST609834 GLSD Medicago truncatula c... 117 2e-024
gb|BQ124409.1|BQ124409 EST609985 GLSD Medicago truncatula c... 117 2e-024
gb|BG582102.1|BG582102 EST483840 GVN Medicago truncatula cD... 115 8e-024
gb|BF636246.1|BF636246 NF059A07DT1F1052 Drought Medicago tr... 111 1e-022
gb|BI272316.1|BI272316 NF017C11FL1F1085 Developing flower M... 111 1e-022
gb|AW329273.2|AW329273 N200493e rootphos(-) Medicago trunca... 109 5e-022
gb|BE249354.2|BE249354 NF014E10LF1F1082 Developing leaf Med... 109 5e-022
gb|CA922986.1|CA922986 EST640704 MTUS Medicago truncatula c... 109 5e-022
gb|BG647007.1|BG647007 EST508626 HOGA Medicago truncatula c... 103 3e-020
gb|BQ750503.1|BQ750503 EST633239 KVKC Medicago truncatula c... 103 3e-020
gb|BI309835.1|BI309835 EST5311585 GESD Medicago truncatula ... 76 7e-012
gb|AQ580105.1|AQ580105 T135662b shotgun sub-library of BAC ... 74 3e-011
gb|AC131455.5| Medicago truncatula clone mth1-42h9, complet... 74 3e-011
gb|AC124972.41| Medicago truncatula clone mth2-24j4, comple... 74 3e-011
gb|BG450825.1|BG450825 NF093E10DT1F1081 Drought Medicago tr... 62 1e-007
gb|BI271282.1|BI271282 NF053G12FL1F1100 Developing flower M... 62 1e-007
gb|AJ499890.1|AJ499890 AJ499890 MTGIM Medicago truncatula c... 62 1e-007
gb|AQ580029.1|AQ580029 T135582b shotgun sub-library of BAC ... 52 1e-004
gb|AW736122.1|AW736122 EST332108 KV3 Medicago truncatula cD... 50 4e-004
gb|AL374005.1|AL374005 MtBB04B02R1 MtBB Medicago truncatula... 50 4e-004
gb|BI310785.1|BI310785 EST5312535 GESD Medicago truncatula ... 50 4e-004
gb|CX541282.1|CX541282 s13dNF72A10GS081_465860 Germinating ... 50 4e-004
gb|AL389157.1|AL389157 MtBC53B05F1 MtBC Medicago truncatula... 48 0.002
gb|BF640885.1|BF640885 NF050D12IN1F1101 Insect herbivory Me... 48 0.002
gb|CX542164.1|CX542164 s13dNF86A08GS055_467636 Germinating ... 48 0.002
gb|AL389158.1|AL389158 MtBC53B05R1 MtBC Medicago truncatula... 46 0.006
gb|BF003223.1|BF003223 EST431771 KV1 Medicago truncatula cD... 46 0.006
gb|BI311950.1|BI311950 EST5313700 GESD Medicago truncatula ... 44 0.024
gb|BE202726.1|BE202726 EST402748 KV1 Medicago truncatula cD... 42 0.096
gb|CG921028.1|CG921028 MBEBT44TF mth2 Medicago truncatula g... 40 0.38
>gb|BG582103.1|BG582103 EST483841 GVN Medicago truncatula cDNA clone pGVN-66B2 5' end, mRNA
sequence
Length = 830
Score = 129 bits (65), Expect = 5e-028
Identities = 329/417 (78%)
Strand = Plus / Minus
Query: 378 cccatggctagatgaagtctccgacatctcgtcgaactttatgaactgcccaacctgggc 437
|||||||||||||||||| || ||| | || || ||||| |||||||| || || || |
Sbjct: 703 cccatggctagatgaagtttcagacttgtcttcaaacttcatgaactgtcccacttgaga 644
Query: 438 ggctgcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttg 497
|| || | ||||| |||||||| ||||||||||| || ||||| || ||||||| ||
Sbjct: 643 agcagccaaatgggcatagcagattggagcaacaacagagatggcagtagtgctccgctg 584
Query: 498 gtacacgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctc 557
|| || || ||||| |||||||| ||||| || || ||||| ||| ||||| |||||
Sbjct: 583 ataaacataggagagagagtgcacaagctcttgaagatcatctggagaaaagccaatctc 524
Query: 558 gtcatgcaggatgtgatagtgagttggcctggtagtcccaatcattccagcatgtgaaca 617
|| |||| ||||| ||||||||||| | || ||||||||||||||||| | |||
Sbjct: 523 atccaaaaggacatgataatgagttggcctactggtaccaatcattccagcatgagcaca 464
Query: 618 catgtagaaatcgaagttccttggatgacagactttgttgtcaacaacagtgccagctgg 677
|||||||||||| | |||| |||||||||| ||||||||| |||||||| |||| ||
Sbjct: 463 catgtagaaatcataattccggggatgacagattttgttgtccacaacagtaccaggagg 404
Query: 678 aacattatctggctttccaggaatgaaaaatttagtgtggtgattcttctgggcaatgat 737
|||||||| || |||||| ||| || || ||||| |||||||||||||||| ||
Sbjct: 403 cacattatccggagatccaggctggaagaactttgtgtgatgattcttctgggcaacaat 344
Query: 738 caatgtgaacttgggattccatttctcatcaagaaatttgcaagcctcaatgatttg 794
| || ||||| ||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 343 aaccagaaatttggggttccacttttcatcaagaaatttgcaggcctcaatgatttg 287
>gb|AL374004.1|AL374004 MtBB04B02F1 MtBB Medicago truncatula cDNA clone MtBB04B02 T3, mRNA
sequence
Length = 492
Score = 127 bits (64), Expect = 2e-027
Identities = 328/416 (78%)
Strand = Plus / Minus
Query: 379 ccatggctagatgaagtctccgacatctcgtcgaactttatgaactgcccaacctgggcg 438
||||||||||||||||| || ||| | || || ||||| |||||||| || || || |
Sbjct: 440 ccatggctagatgaagtttcagacttgtcttcaaacttcatgaactgtcccacttgagaa 381
Query: 439 gctgcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttgg 498
|| || | ||||| |||||||| ||||||||||| || ||||| || ||||||| ||
Sbjct: 380 gcagccaaatgggcatagcagattggagcaacaacagagatggcagtagtgctccgctga 321
Query: 499 tacacgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcg 558
|| || || ||||| |||||||| ||||| || || ||||| ||| ||||| |||||
Sbjct: 320 taaacataggagagagagtgcacaagctcttgaagatcatctggagaaaagccaatctca 261
Query: 559 tcatgcaggatgtgatagtgagttggcctggtagtcccaatcattccagcatgtgaacac 618
|| |||| ||||| ||||||||||| | || ||||||||||||||||| | ||||
Sbjct: 260 tccaaaaggacatgataatgagttggcctactggtaccaatcattccagcatgagcacac 201
Query: 619 atgtagaaatcgaagttccttggatgacagactttgttgtcaacaacagtgccagctgga 678
||||||||||| | |||| |||||||||| ||||||||| |||||||| |||| ||
Sbjct: 200 atgtagaaatcataattccggggatgacagattttgttgtccacaacagtaccaggaggc 141
Query: 679 acattatctggctttccaggaatgaaaaatttagtgtggtgattcttctgggcaatgatc 738
|||||||| || |||||| ||| || || ||||| |||||||||||||||| ||
Sbjct: 140 acattatccggagatccaggctggaagaactttgtgtgatgattcttctgggcaacaata 81
Query: 739 aatgtgaacttgggattccatttctcatcaagaaatttgcaagcctcaatgatttg 794
| || ||||| ||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 80 accagaaatttggggttccacttttcatcaagaaatttgcaggcctcaatgatttg 25
>gb|BI266886.1|BI266886 NF094H07IN1F1064 Insect herbivory Medicago truncatula cDNA clone
NF094H07IN 5', mRNA sequence
Length = 642
Score = 127 bits (64), Expect = 2e-027
Identities = 328/416 (78%)
Strand = Plus / Minus
Query: 379 ccatggctagatgaagtctccgacatctcgtcgaactttatgaactgcccaacctgggcg 438
||||||||||||||||| || ||| | || || ||||| |||||||| || || || |
Sbjct: 457 ccatggctagatgaagtttcagacttgtcttcaaacttcatgaactgtcccacttgagaa 398
Query: 439 gctgcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttgg 498
|| || | ||||| |||||||| ||||||||||| || ||||| || ||||||| ||
Sbjct: 397 gcagccaaatgggcatagcagattggagcaacaacagagatggcagtagtgctccgctga 338
Query: 499 tacacgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcg 558
|| || || ||||| |||||||| ||||| || || ||||| ||| ||||| |||||
Sbjct: 337 taaacataggagagagagtgcacaagctcttgaagatcatctggagaaaagccaatctca 278
Query: 559 tcatgcaggatgtgatagtgagttggcctggtagtcccaatcattccagcatgtgaacac 618
|| |||| ||||| ||||||||||| | || ||||||||||||||||| | ||||
Sbjct: 277 tccaaaaggacatgataatgagttggcctactggtaccaatcattccagcatgagcacac 218
Query: 619 atgtagaaatcgaagttccttggatgacagactttgttgtcaacaacagtgccagctgga 678
||||||||||| | |||| |||||||||| ||||||||| |||||||| |||| ||
Sbjct: 217 atgtagaaatcataattccggggatgacagattttgttgtccacaacagtaccaggaggc 158
Query: 679 acattatctggctttccaggaatgaaaaatttagtgtggtgattcttctgggcaatgatc 738
|||||||| || |||||| ||| || || ||||| |||||||||||||||| ||
Sbjct: 157 acattatccggagatccaggctggaagaactttgtgtgatgattcttctgggcaacaata 98
Query: 739 aatgtgaacttgggattccatttctcatcaagaaatttgcaagcctcaatgatttg 794
| || ||||| ||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 97 accagaaatttggggttccacttttcatcaagaaatttgcaggcctcaatgatttg 42
>gb|CB893980.1|CB893980 EST646772 HOGA Medicago truncatula cDNA clone HOGA-29L17, mRNA
sequence
Length = 794
Score = 119 bits (60), Expect = 5e-025
Identities = 327/416 (78%)
Strand = Plus / Minus
Query: 379 ccatggctagatgaagtctccgacatctcgtcgaactttatgaactgcccaacctgggcg 438
||||||||||||||||| || ||| | || || ||||| |||||||| || || || |
Sbjct: 435 ccatggctagatgaagtttcagacttgtcttcaaacttcatgaactgtcccacttgagaa 376
Query: 439 gctgcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttgg 498
|| || | ||||| |||||||| ||||||||||| || ||||| || ||||||| ||
Sbjct: 375 gcagccaaatgggcatagcagattggagcaacaacagagatggcagtagtgctccgctga 316
Query: 499 tacacgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcg 558
|| || || ||||| |||||||| ||||| || || ||||| ||| ||||| |||||
Sbjct: 315 taaacataggagagagagtgcacaagctcttgaagatcatctggagaaaagccaatctca 256
Query: 559 tcatgcaggatgtgatagtgagttggcctggtagtcccaatcattccagcatgtgaacac 618
|| |||| ||||| ||||||||||| | || ||||||||||||||||| | ||||
Sbjct: 255 tccaaaaggacatgataatgagttggcctactggtaccaatcattccagcatgagcacac 196
Query: 619 atgtagaaatcgaagttccttggatgacagactttgttgtcaacaacagtgccagctgga 678
||||||||||| | |||| |||||||||| ||||||||| |||||||| |||| ||
Sbjct: 195 atgtagaaatcataattccggggatgacagattttgttgtccacaacagtaccaggaggc 136
Query: 679 acattatctggctttccaggaatgaaaaatttagtgtggtgattcttctgggcaatgatc 738
|||||||| || |||||| ||| || || ||||| |||||||||||||||| ||
Sbjct: 135 acattatccggagatccaggctggaagaactttgtgtgatgattcttctgggcaacaata 76
Query: 739 aatgtgaacttgggattccatttctcatcaagaaatttgcaagcctcaatgatttg 794
| || ||||| ||||| || |||||||||||||| || ||||||||||||||
Sbjct: 75 accagaaatttggggttccacttttcatcaagaaatttacaggcctcaatgatttg 20
>gb|BQ124258.1|BQ124258 EST609834 GLSD Medicago truncatula cDNA clone pGLSD-34D22, mRNA
sequence
Length = 722
Score = 117 bits (59), Expect = 2e-024
Identities = 323/411 (78%)
Strand = Plus / Minus
Query: 379 ccatggctagatgaagtctccgacatctcgtcgaactttatgaactgcccaacctgggcg 438
||||||||||||||||| || ||| | || || ||||| |||||||| || || || |
Sbjct: 411 ccatggctagatgaagtttcagacttgtcttcaaacttcatgaactgtcccacttgagaa 352
Query: 439 gctgcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttgg 498
|| || | ||||| |||||||| ||||||||||| || ||||| || ||||||| ||
Sbjct: 351 gcagccaaatgggcatagcagattggagcaacaacagagatggcagtagtgctccgctga 292
Query: 499 tacacgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcg 558
|| || || ||||| |||||||| ||||| || || ||||| ||| ||||| |||||
Sbjct: 291 taaacataggagagagagtgcacaagctcttgaagatcatctggagaaaagccaatctca 232
Query: 559 tcatgcaggatgtgatagtgagttggcctggtagtcccaatcattccagcatgtgaacac 618
|| |||| ||||| ||||||||||| | || ||||||||||||||||| | ||||
Sbjct: 231 tccaaaaggacatgataatgagttggcctactggtaccaatcattccagcatgagcacac 172
Query: 619 atgtagaaatcgaagttccttggatgacagactttgttgtcaacaacagtgccagctgga 678
||||||||||| | |||| |||||||||| ||||||||| |||||||| |||| ||
Sbjct: 171 atgtagaaatcataattccggggatgacagattttgttgtccacaacagtaccaggaggc 112
Query: 679 acattatctggctttccaggaatgaaaaatttagtgtggtgattcttctgggcaatgatc 738
|||||||| || |||||| ||| || || ||||| |||||||||||||||| ||
Sbjct: 111 acattatccggagatccaggctggaagaactttgtgtgatgattcttctgggcaacaata 52
Query: 739 aatgtgaacttgggattccatttctcatcaagaaatttgcaagcctcaatg 789
| || ||||| ||||| || ||||||||||||||||| |||||||||
Sbjct: 51 accagaaatttggggttccacttttcatcaagaaatttgcaggcctcaatg 1
>gb|BQ124409.1|BQ124409 EST609985 GLSD Medicago truncatula cDNA clone pGLSD-35A4, mRNA
sequence
Length = 622
Score = 117 bits (59), Expect = 2e-024
Identities = 275/347 (79%)
Strand = Plus / Minus
Query: 448 tgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttggtacacgtaa 507
||||| |||||||| |||||| |||| || ||||| || ||||||| || || || ||
Sbjct: 605 tgggcatagcagattggagcaccaacagagatggcagtagtgctccgctgataaacatag 546
Query: 508 gagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcgtcatgcagg 567
||||| |||||||| ||||| || || ||||| ||| ||||| ||||| || |||
Sbjct: 545 gagagagagtgcacaagctcttgaagatcatctggagaaaagccaatctcatccaaaagg 486
Query: 568 atgtgatagtgagttggcctggtagtcccaatcattccagcatgtgaacacatgtagaaa 627
| ||||| ||||||||||| | || ||||||||||||||||| | |||||||||||||
Sbjct: 485 acatgataatgagttggcctactggtaccaatcattccagcatgagcacacatgtagaaa 426
Query: 628 tcgaagttccttggatgacagactttgttgtcaacaacagtgccagctggaacattatct 687
|| | |||| |||||||||| ||||||||| |||||||| |||| || ||||||||
Sbjct: 425 tcataattccggggatgacagattttgttgtccacaacagtaccaggaggcacattatcc 366
Query: 688 ggctttccaggaatgaaaaatttagtgtggtgattcttctgggcaatgatcaatgtgaac 747
|| |||||| ||| || || ||||| |||||||||||||||| || | ||
Sbjct: 365 ggagatccaggctggaagaactttgtgtgatgattcttctgggcaacaataaccagaaat 306
Query: 748 ttgggattccatttctcatcaagaaatttgcaagcctcaatgatttg 794
||||| ||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 305 ttggggttccacttttcatcaagaaatttgcaggcctcaatgatttg 259
>gb|BG582102.1|BG582102 EST483840 GVN Medicago truncatula cDNA clone pGVN-66P23 5' end,
mRNA sequence
Length = 824
Score = 115 bits (58), Expect = 8e-024
Identities = 329/418 (78%), Gaps = 1/418 (0%)
Strand = Plus / Minus
Query: 378 cccatggctagatgaagtctccgacatctcgtcgaactttatgaactgcccaacctgggc 437
|||||||||||||||||| || ||| | || || ||||| |||||||| || || || |
Sbjct: 705 cccatggctagatgaagtttcagacttgtcttcaaacttcatgaactgtcccacttgaga 646
Query: 438 ggctgcaaggtgggcgtagcagatgggagcaacaactgatatggctgtt-gtgctccttt 496
|| || | ||||| |||||||| ||||||||||| || ||||| | | ||||||| |
Sbjct: 645 agcagccaaatgggcatagcagattggagcaacaacagagatggcaggtagtgctccgct 586
Query: 497 ggtacacgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatct 556
| || || || ||||| |||||||| ||||| || || ||||| ||| ||||| ||||
Sbjct: 585 gataaacataggagagagagtgcacaagctcttgaagatcatctggagaaaagccaatct 526
Query: 557 cgtcatgcaggatgtgatagtgagttggcctggtagtcccaatcattccagcatgtgaac 616
| || |||| ||||| ||||||||||| | || ||||||||||||||||| | ||
Sbjct: 525 catccaaaaggacatgataatgagttggcctactggtaccaatcattccagcatgagcac 466
Query: 617 acatgtagaaatcgaagttccttggatgacagactttgttgtcaacaacagtgccagctg 676
||||||||||||| | |||| |||||||||| ||||||||| |||||||| |||| |
Sbjct: 465 acatgtagaaatcataattccggggatgacagattttgttgtccacaacagtaccaggag 406
Query: 677 gaacattatctggctttccaggaatgaaaaatttagtgtggtgattcttctgggcaatga 736
| |||||||| || |||||| ||| || || ||||| |||||||||||||||| |
Sbjct: 405 gcacattatccggagatccaggctggaagaactttgtgtgatgattcttctgggcaacaa 346
Query: 737 tcaatgtgaacttgggattccatttctcatcaagaaatttgcaagcctcaatgatttg 794
| | || ||||| ||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 345 taaccagaaatttggggttccacttttcatcaagaaatttgcaggcctcaatgatttg 288
>gb|BF636246.1|BF636246 NF059A07DT1F1052 Drought Medicago truncatula cDNA clone NF059A07DT
5', mRNA sequence
Length = 683
Score = 111 bits (56), Expect = 1e-022
Identities = 182/224 (81%)
Strand = Plus / Minus
Query: 571 tgatagtgagttggcctggtagtcccaatcattccagcatgtgaacacatgtagaaatcg 630
||||| ||||||||||| | || ||||||||||||||||| | |||||||||||||||
Sbjct: 651 tgataatgagttggcctactggtaccaatcattccagcatgagcacacatgtagaaatca 592
Query: 631 aagttccttggatgacagactttgttgtcaacaacagtgccagctggaacattatctggc 690
| |||| |||||||||| ||||||||| |||||||| |||| || |||||||| ||
Sbjct: 591 taattccggggatgacagattttgttgtccacaacagtaccaggaggcacattatccgga 532
Query: 691 tttccaggaatgaaaaatttagtgtggtgattcttctgggcaatgatcaatgtgaacttg 750
|||||| ||| || || ||||| |||||||||||||||| || | || |||
Sbjct: 531 gatccaggctggaagaactttgtgtgatgattcttctgggcaacaataaccagaaatttg 472
Query: 751 ggattccatttctcatcaagaaatttgcaagcctcaatgatttg 794
|| ||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 471 gggttccacttttcatcaagaaatttgcaggcctcaatgatttg 428
>gb|BI272316.1|BI272316 NF017C11FL1F1085 Developing flower Medicago truncatula cDNA clone
NF017C11FL 5', mRNA sequence
Length = 689
Score = 111 bits (56), Expect = 1e-022
Identities = 182/224 (81%)
Strand = Plus / Minus
Query: 571 tgatagtgagttggcctggtagtcccaatcattccagcatgtgaacacatgtagaaatcg 630
||||| ||||||||||| | || ||||||||||||||||| | |||||||||||||||
Sbjct: 571 tgataatgagttggcctactggtaccaatcattccagcatgagcacacatgtagaaatca 512
Query: 631 aagttccttggatgacagactttgttgtcaacaacagtgccagctggaacattatctggc 690
| |||| |||||||||| ||||||||| |||||||| |||| || |||||||| ||
Sbjct: 511 taattccggggatgacagattttgttgtccacaacagtaccaggaggcacattatccgga 452
Query: 691 tttccaggaatgaaaaatttagtgtggtgattcttctgggcaatgatcaatgtgaacttg 750
|||||| ||| || || ||||| |||||||||||||||| || | || |||
Sbjct: 451 gatccaggctggaagaactttgtgtgatgattcttctgggcaacaataaccagaaatttg 392
Query: 751 ggattccatttctcatcaagaaatttgcaagcctcaatgatttg 794
|| ||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 391 gggttccacttttcatcaagaaatttgcaggcctcaatgatttg 348
>gb|AW329273.2|AW329273 N200493e rootphos(-) Medicago truncatula cDNA clone MHRP-18C1, mRNA
sequence
Length = 588
Score = 109 bits (55), Expect = 5e-022
Identities = 280/355 (78%)
Strand = Plus / Minus
Query: 379 ccatggctagatgaagtctccgacatctcgtcgaactttatgaactgcccaacctgggcg 438
||||||||||||||||| || ||| | || || ||||| |||||||| || || || |
Sbjct: 399 ccatggctagatgaagtttcagacttgtcttcaaacttcatgaactgtcccacttgagaa 340
Query: 439 gctgcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttgg 498
|| || | ||||| |||||||| ||||||||||| || ||||| || ||||||| ||
Sbjct: 339 gcagccaaatgggcatagcagattggagcaacaacagagatggcagtagtgctccgctga 280
Query: 499 tacacgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcg 558
|| || || ||||| |||||||| ||||| || || ||||| ||| ||||| |||||
Sbjct: 279 taaacataggagagagagtgcacaagctcttgaagatcatctggagaaaagccaatctca 220
Query: 559 tcatgcaggatgtgatagtgagttggcctggtagtcccaatcattccagcatgtgaacac 618
|| |||| ||||| ||||||||||| | || ||||||||||||||||| | ||||
Sbjct: 219 tccaaaaggacatgataatgagttggcctactggtaccaatcattccagcatgagcacac 160
Query: 619 atgtagaaatcgaagttccttggatgacagactttgttgtcaacaacagtgccagctgga 678
||||||||||| | |||| |||||||||| ||||||||| |||||||| |||| ||
Sbjct: 159 atgtagaaatcataattccggggatgacagattttgttgtccacaacagtaccaggaggc 100
Query: 679 acattatctggctttccaggaatgaaaaatttagtgtggtgattcttctgggcaa 733
|||||||| || |||||| ||| || || ||||| ||||||||||||||||
Sbjct: 99 acattatccggagatccaggctggaagaactttgtgtgatgattcttctgggcaa 45
>gb|BE249354.2|BE249354 NF014E10LF1F1082 Developing leaf Medicago truncatula cDNA clone
NF014E10LF 5', mRNA sequence
Length = 646
Score = 109 bits (55), Expect = 5e-022
Identities = 280/355 (78%)
Strand = Plus / Minus
Query: 379 ccatggctagatgaagtctccgacatctcgtcgaactttatgaactgcccaacctgggcg 438
||||||||||||||||| || ||| | || || ||||| |||||||| || || || |
Sbjct: 362 ccatggctagatgaagtttcagacttgtcttcaaacttcatgaactgtcccacttgagaa 303
Query: 439 gctgcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttgg 498
|| || | ||||| |||||||| ||||||||||| || ||||| || ||||||| ||
Sbjct: 302 gcagccaaatgggcatagcagattggagcaacaacagagatggcagtagtgctccgctga 243
Query: 499 tacacgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcg 558
|| || || ||||| |||||||| ||||| || || ||||| ||| ||||| |||||
Sbjct: 242 taaacataggagagagagtgcacaagctcttgaagatcatctggagaaaagccaatctca 183
Query: 559 tcatgcaggatgtgatagtgagttggcctggtagtcccaatcattccagcatgtgaacac 618
|| |||| ||||| ||||||||||| | || ||||||||||||||||| | ||||
Sbjct: 182 tccaaaaggacatgataatgagttggcctactggtaccaatcattccagcatgagcacac 123
Query: 619 atgtagaaatcgaagttccttggatgacagactttgttgtcaacaacagtgccagctgga 678
||||||||||| | |||| |||||||||| ||||||||| |||||||| |||| ||
Sbjct: 122 atgtagaaatcataattccggggatgacagattttgttgtccacaacagtaccaggaggc 63
Query: 679 acattatctggctttccaggaatgaaaaatttagtgtggtgattcttctgggcaa 733
|||||||| || |||||| ||| || || ||||| ||||||||||||||||
Sbjct: 62 acattatccggagatccaggctggaagaactttgtgtgatgattcttctgggcaa 8
>gb|CA922986.1|CA922986 EST640704 MTUS Medicago truncatula cDNA clone MTUS-61C12, mRNA
sequence
Length = 786
Score = 109 bits (55), Expect = 5e-022
Identities = 280/355 (78%)
Strand = Plus / Plus
Query: 379 ccatggctagatgaagtctccgacatctcgtcgaactttatgaactgcccaacctgggcg 438
||||||||||||||||| || ||| | || || ||||| |||||||| || || || |
Sbjct: 400 ccatggctagatgaagtttcagacttgtcttcaaacttcatgaactgtcccacttgagaa 459
Query: 439 gctgcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttgg 498
|| || | ||||| |||||||| ||||||||||| || ||||| || ||||||| ||
Sbjct: 460 gcagccaaatgggcatagcagattggagcaacaacagagatggcagtagtgctccgctga 519
Query: 499 tacacgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcg 558
|| || || ||||| |||||||| ||||| || || ||||| ||| ||||| |||||
Sbjct: 520 taaacataggagagagagtgcacaagctcttgaagatcatctggagaaaagccaatctca 579
Query: 559 tcatgcaggatgtgatagtgagttggcctggtagtcccaatcattccagcatgtgaacac 618
|| |||| ||||| ||||||||||| | || ||||||||||||||||| | ||||
Sbjct: 580 tccaaaaggacatgataatgagttggcctactggtaccaatcattccagcatgagcacac 639
Query: 619 atgtagaaatcgaagttccttggatgacagactttgttgtcaacaacagtgccagctgga 678
||||||||||| | |||| |||||||||| ||||||||| |||||||| |||| ||
Sbjct: 640 atgtagaaatcataattccggggatgacagattttgttgtccacaacagtaccaggaggc 699
Query: 679 acattatctggctttccaggaatgaaaaatttagtgtggtgattcttctgggcaa 733
|||||||| || |||||| ||| || || ||||| ||||||||||||||||
Sbjct: 700 acattatccggagatccaggctggaagaactttgtgtgatgattcttctgggcaa 754
>gb|BG647007.1|BG647007 EST508626 HOGA Medicago truncatula cDNA clone pHOGA-15M6 5' end,
mRNA sequence
Length = 616
Score = 103 bits (52), Expect = 3e-020
Identities = 244/308 (79%)
Strand = Plus / Minus
Query: 379 ccatggctagatgaagtctccgacatctcgtcgaactttatgaactgcccaacctgggcg 438
||||||||||||||||| || ||| | || || ||||| |||||||| || || || |
Sbjct: 409 ccatggctagatgaagtttcagacttgtcttcaaacttcatgaactgtcccacttgagaa 350
Query: 439 gctgcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttgg 498
|| || | ||||| |||||||| ||||||||||| || ||||| || ||||||| ||
Sbjct: 349 gcagccaaatgggcatagcagattggagcaacaacagagatggcagtagtgctccgctga 290
Query: 499 tacacgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcg 558
|| || || ||||| |||||||| ||||| || || ||||| ||| ||||| |||||
Sbjct: 289 taaacataggagagagagtgcacaagctcttgaagatcatctggagaaaagccaatctca 230
Query: 559 tcatgcaggatgtgatagtgagttggcctggtagtcccaatcattccagcatgtgaacac 618
|| |||| ||||| ||||||||||| | || ||||||||||||||||| | ||||
Sbjct: 229 tccaaaaggacatgataatgagttggcctactggtaccaatcattccagcatgagcacac 170
Query: 619 atgtagaaatcgaagttccttggatgacagactttgttgtcaacaacagtgccagctgga 678
||||||||||| | |||| |||||||||| ||||||||| |||||||| |||| ||
Sbjct: 169 atgtagaaatcataattccggggatgacagattttgttgtccacaacagtaccaggaggc 110
Query: 679 acattatc 686
||||||||
Sbjct: 109 acattatc 102
Score = 46.1 bits (23), Expect = 0.006
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 748 ttgggattccatttctcatcaagaaatttgcaagcctca 786
||||| ||||| || ||||||||||||||||| ||||||
Sbjct: 39 ttggggttccacttttcatcaagaaatttgcaggcctca 1
>gb|BQ750503.1|BQ750503 EST633239 KVKC Medicago truncatula cDNA, mRNA sequence
Length = 783
Score = 103 bits (52), Expect = 3e-020
Identities = 244/308 (79%)
Strand = Plus / Plus
Query: 379 ccatggctagatgaagtctccgacatctcgtcgaactttatgaactgcccaacctgggcg 438
||||||||||||||||| || ||| | || || ||||| |||||||| || || || |
Sbjct: 396 ccatggctagatgaagtttcagacttgtcttcaaacttcatgaactgtcccacttgagaa 455
Query: 439 gctgcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttgg 498
|| || | ||||| |||||||| ||||||||||| || ||||| || ||||||| ||
Sbjct: 456 gcagccaaatgggcatagcagattggagcaacaacagagatggcagtagtgctccgctga 515
Query: 499 tacacgtaagagagcgagtgcaccagctcctgcaggtcatcaggattgaagcctatctcg 558
|| || || ||||| |||||||| ||||| || || ||||| ||| ||||| |||||
Sbjct: 516 taaacataggagagagagtgcacaagctcttgaagatcatctggagaaaagccaatctca 575
Query: 559 tcatgcaggatgtgatagtgagttggcctggtagtcccaatcattccagcatgtgaacac 618
|| |||| ||||| ||||||||||| | || ||||||||||||||||| | ||||
Sbjct: 576 tccaaaaggacatgataatgagttggcctactggtaccaatcattccagcatgagcacac 635
Query: 619 atgtagaaatcgaagttccttggatgacagactttgttgtcaacaacagtgccagctgga 678
||||||||||| | |||| |||||||||| ||||||||| |||||||| |||| ||
Sbjct: 636 atgtagaaatcataattccggggatgacagattttgttgtccacaacagtaccaggaggc 695
Query: 679 acattatc 686
||||||||
Sbjct: 696 acattatc 703
>gb|BI309835.1|BI309835 EST5311585 GESD Medicago truncatula cDNA clone pGESD4E4 5' end,
mRNA sequence
Length = 739
Score = 75.8 bits (38), Expect = 7e-012
Identities = 182/226 (80%), Gaps = 3/226 (1%)
Strand = Plus / Minus
Query: 571 tgatagtgagttggcctggtagtcccaatc-attccagcatgtgaacacatgtagaaatc 629
||||| ||||||||||| | || |||||| ||||||||||| | |||||||||||||||
Sbjct: 710 tgataatgagttggcctactggtaccaatccattccagcatgagcacacatgtagaaatc 651
Query: 630 gaagttccttggatgacagactttgttgtcaacaacag-tgccagctggaacattatctg 688
| |||| |||||||||| ||||||||| ||||||| | |||| || |||||||| |
Sbjct: 650 ataattccg-ggatgacagattttgttgtccacaacaggtaccaggaggcacattatccg 592
Query: 689 gctttccaggaatgaaaaatttagtgtggtgattcttctgggcaatgatcaatgtgaact 748
| |||||| ||| || || ||||| |||||||||||||||| || | || |
Sbjct: 591 gagatccaggctggaagaactttgtgtgatgattcttctgggcaacaataaccagaaatt 532
Query: 749 tgggattccatttctcatcaagaaatttgcaagcctcaatgatttg 794
|||| ||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 531 tggggttccacttttcatcaagaaatttgcaggcctcaatgatttg 486
>gb|AQ580105.1|AQ580105 T135662b shotgun sub-library of BAC clone 42H09 Medicago truncatula
genomic clone 42-H-09-C-086, DNA sequence
Length = 447
Score = 73.8 bits (37), Expect = 3e-011
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
|||||||||||||||| | ||||||||||||||| | |||| |||||||||| |||||
Sbjct: 296 caatcattccagcatgagcacacatgtagaaatcataattccggggatgacagattttgt 355
Query: 656 tgtcaacaacagt 668
|||| ||||||||
Sbjct: 356 tgtccacaacagt 368
>gb|AC131455.5| Medicago truncatula clone mth1-42h9, complete sequence
Length = 96063
Score = 73.8 bits (37), Expect = 3e-011
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
|||||||||||||||| | ||||||||||||||| | |||| |||||||||| |||||
Sbjct: 79766 caatcattccagcatgagcacacatgtagaaatcataattccggggatgacagattttgt 79707
Query: 656 tgtcaacaacagt 668
|||| ||||||||
Sbjct: 79706 tgtccacaacagt 79694
Score = 61.9 bits (31), Expect = 1e-007
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 706 aatttagtgtggtgattcttctgggcaatgatcaatgtgaacttgggattccatttctca 765
||||| ||||| |||||||||||||||| |||| | |||||||| ||||| || |||
Sbjct: 87685 aattttgtgtgatgattcttctgggcaacaatcaccataaacttggggttccaattttca 87626
Query: 766 tcaagaaatttgcaagcct 784
||||||||||| |||||||
Sbjct: 87625 tcaagaaatttacaagcct 87607
Score = 42.1 bits (21), Expect = 0.096
Identities = 60/73 (82%)
Strand = Plus / Minus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
|||||||||||||||| | |||||| || ||||| | ||||| ||||| || | ||||
Sbjct: 87884 caatcattccagcatgagcacacatataaaaatcataattcctaggatggcaaattttgc 87825
Query: 656 tgtcaacaacagt 668
|||| ||||||||
Sbjct: 87824 tgtccacaacagt 87812
Score = 42.1 bits (21), Expect = 0.096
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 748 ttgggattccatttctcatcaagaaatttgcaagcct 784
||||| ||||| || ||||||||||||||||| ||||
Sbjct: 79518 ttggggttccacttttcatcaagaaatttgcaggcct 79482
>gb|AC124972.41| Medicago truncatula clone mth2-24j4, complete sequence
Length = 124069
Score = 73.8 bits (37), Expect = 3e-011
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
|||||||||||||||| | ||||||||||||||| | |||| |||||||||| |||||
Sbjct: 74110 caatcattccagcatgagcacacatgtagaaatcataattccggggatgacagattttgt 74169
Query: 656 tgtcaacaacagt 668
|||| ||||||||
Sbjct: 74170 tgtccacaacagt 74182
Score = 61.9 bits (31), Expect = 1e-007
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 706 aatttagtgtggtgattcttctgggcaatgatcaatgtgaacttgggattccatttctca 765
||||| ||||| |||||||||||||||| |||| | |||||||| ||||| || |||
Sbjct: 66191 aattttgtgtgatgattcttctgggcaacaatcaccataaacttggggttccaattttca 66250
Query: 766 tcaagaaatttgcaagcct 784
||||||||||| |||||||
Sbjct: 66251 tcaagaaatttacaagcct 66269
Score = 42.1 bits (21), Expect = 0.096
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 748 ttgggattccatttctcatcaagaaatttgcaagcct 784
||||| ||||| || ||||||||||||||||| ||||
Sbjct: 74358 ttggggttccacttttcatcaagaaatttgcaggcct 74394
Score = 42.1 bits (21), Expect = 0.096
Identities = 60/73 (82%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatcgaagttccttggatgacagactttgt 655
|||||||||||||||| | |||||| || ||||| | ||||| ||||| || | ||||
Sbjct: 65992 caatcattccagcatgagcacacatataaaaatcataattcctaggatggcaaattttgc 66051
Query: 656 tgtcaacaacagt 668
|||| ||||||||
Sbjct: 66052 tgtccacaacagt 66064
>gb|BG450825.1|BG450825 NF093E10DT1F1081 Drought Medicago truncatula cDNA clone NF093E10DT
5', mRNA sequence
Length = 683
Score = 61.9 bits (31), Expect = 1e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 748 ttgggattccatttctcatcaagaaatttgcaagcctcaatgatttg 794
||||| ||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 607 ttggggttccacttttcatcaagaaatttgcaggcctcaatgatttg 561
>gb|BI271282.1|BI271282 NF053G12FL1F1100 Developing flower Medicago truncatula cDNA clone
NF053G12FL 5', mRNA sequence
Length = 653
Score = 61.9 bits (31), Expect = 1e-007
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 748 ttgggattccatttctcatcaagaaatttgcaagcctcaatgatttg 794
||||| ||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 582 ttggggttccacttttcatcaagaaatttgcaggcctcaatgatttg 536
>gb|AJ499890.1|AJ499890 AJ499890 MTGIM Medicago truncatula cDNA clone mtgmacc120009g04,
mRNA sequence
Length = 531
Score = 61.9 bits (31), Expect = 1e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 748 ttgggattccatttctcatcaagaaatttgcaagcctcaatgatttg 794
||||| ||||| || ||||||||||||||||| ||||||||||||||
Sbjct: 291 ttggggttccacttttcatcaagaaatttgcaggcctcaatgatttg 337
>gb|AQ580029.1|AQ580029 T135582b shotgun sub-library of BAC clone 42H09 Medicago truncatula
genomic clone 42-H-09-C-006, DNA sequence
Length = 523
Score = 52.0 bits (26), Expect = 1e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 596 caatcattccagcatgtgaacacatgtagaaatc 629
|||||||||||||||| | |||||||||||||||
Sbjct: 488 caatcattccagcatgagcacacatgtagaaatc 521
>gb|AW736122.1|AW736122 EST332108 KV3 Medicago truncatula cDNA clone pKV3-5L19, mRNA
sequence
Length = 554
Score = 50.1 bits (25), Expect = 4e-004
Identities = 118/149 (79%)
Strand = Plus / Plus
Query: 379 ccatggctagatgaagtctccgacatctcgtcgaactttatgaactgcccaacctgggcg 438
||||||||||||||||| || ||| | || || ||||| |||||||| || || || |
Sbjct: 352 ccatggctagatgaagtttcagacttgtcttcaaacttcatgaactgtcccacttgagaa 411
Query: 439 gctgcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttgg 498
|| || | ||||| |||||||| ||||||||||| || ||||| || ||||||| ||
Sbjct: 412 gcagccaaatgggcatagcagattggagcaacaacagagatggcagtagtgctccgctga 471
Query: 499 tacacgtaagagagcgagtgcaccagctc 527
|| || || ||||| |||||||| |||||
Sbjct: 472 taaacataggagagagagtgcacaagctc 500
>gb|AL374005.1|AL374005 MtBB04B02R1 MtBB Medicago truncatula cDNA clone MtBB04B02 T7, mRNA
sequence
Length = 552
Score = 50.1 bits (25), Expect = 4e-004
Identities = 118/149 (79%)
Strand = Plus / Minus
Query: 379 ccatggctagatgaagtctccgacatctcgtcgaactttatgaactgcccaacctgggcg 438
||||||||||||||||| || ||| | || || ||||| |||||||| || || || |
Sbjct: 228 ccatggctagatgaagtttcagacttgtcttcaaacttcatgaactgtcccacttgagaa 169
Query: 439 gctgcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttgg 498
|| || | ||||| |||||||| ||||||||||| || ||||| || ||||||| ||
Sbjct: 168 gcagccaaatgggcatagcagattggagcaacaacagagatggcagtagtgctccgctga 109
Query: 499 tacacgtaagagagcgagtgcaccagctc 527
|| || || ||||| |||||||| |||||
Sbjct: 108 taaacataggagagagagtgcacaagctc 80
>gb|BI310785.1|BI310785 EST5312535 GESD Medicago truncatula cDNA clone pGESD9E11 5' end,
mRNA sequence
Length = 619
Score = 50.1 bits (25), Expect = 4e-004
Identities = 118/149 (79%)
Strand = Plus / Minus
Query: 379 ccatggctagatgaagtctccgacatctcgtcgaactttatgaactgcccaacctgggcg 438
||||||||||||||||| || ||| | || || ||||| |||||||| || || || |
Sbjct: 214 ccatggctagatgaagtttcagacttgtcttcaaacttcatgaactgtcccacttgagaa 155
Query: 439 gctgcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttgg 498
|| || | ||||| |||||||| ||||||||||| || ||||| || ||||||| ||
Sbjct: 154 gcagccaaatgggcatagcagattggagcaacaacagagatggcagtagtgctccgctga 95
Query: 499 tacacgtaagagagcgagtgcaccagctc 527
|| || || ||||| |||||||| |||||
Sbjct: 94 taaacataggagagagagtgcacaagctc 66
>gb|CX541282.1|CX541282 s13dNF72A10GS081_465860 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 554
Score = 50.1 bits (25), Expect = 4e-004
Identities = 118/149 (79%)
Strand = Plus / Minus
Query: 379 ccatggctagatgaagtctccgacatctcgtcgaactttatgaactgcccaacctgggcg 438
||||||||||||||||| || ||| | || || ||||| |||||||| || || || |
Sbjct: 189 ccatggctagatgaagtttcagacttgtcttcaaacttcatgaactgtcccacttgagaa 130
Query: 439 gctgcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcctttgg 498
|| || | ||||| |||||||| ||||||||||| || ||||| || ||||||| ||
Sbjct: 129 gcagccaaatgggcatagcagattggagcaacaacagagatggcagtagtgctccgctga 70
Query: 499 tacacgtaagagagcgagtgcaccagctc 527
|| || || ||||| |||||||| |||||
Sbjct: 69 taaacataggagagagagtgcacaagctc 41
>gb|AL389157.1|AL389157 MtBC53B05F1 MtBC Medicago truncatula cDNA clone MtBC53B05 T3, mRNA
sequence
Length = 498
Score = 48.1 bits (24), Expect = 0.002
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 767 caagaaatttgcaagcctcaatgatttg 794
||||||||||||| ||||||||||||||
Sbjct: 498 caagaaatttgcaggcctcaatgatttg 471
>gb|BF640885.1|BF640885 NF050D12IN1F1101 Insect herbivory Medicago truncatula cDNA clone
NF050D12IN 5', mRNA sequence
Length = 677
Score = 48.1 bits (24), Expect = 0.002
Identities = 162/208 (77%)
Strand = Plus / Minus
Query: 466 gcaacaactgatatggctgttgtgctcctttggtacacgtaagagagcgagtgcaccagc 525
||||||||||| || || || |||||||| ||||| || || || || || || || |||
Sbjct: 494 gcaacaactgaaatagcagtcgtgctcctctggtaaacatatgacagggaatgaacaagc 435
Query: 526 tcctgcaggtcatcaggattgaagcctatctcgtcatgcaggatgtgatagtgagttggc 585
||||| || |||||||| |||||| ||||| ||| |||| | || ||||| || |||
Sbjct: 434 tcctgaagttcatcaggggagaagccaatctcatcaagcagcacatggtagtgggtaggc 375
Query: 586 ctggtagtcccaatcattccagcatgtgaacacatgtagaaatcgaagttccttggatga 645
|| | || || ||||| |||||||| | ||| | ||||||||| |||| |||||||||
Sbjct: 374 ctactggtgcctatcatcccagcatgagcacagaggtagaaatcatagtttcttggatga 315
Query: 646 cagactttgttgtcaacaacagtgccag 673
|| | ||| ||||| | |||||| ||||
Sbjct: 314 caaattttattgtcgataacagttccag 287
Score = 42.1 bits (21), Expect = 0.096
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 763 tcatcaagaaatttgcaagcctcaatgat 791
||||||||||| ||||| |||||||||||
Sbjct: 197 tcatcaagaaacttgcatgcctcaatgat 169
>gb|CX542164.1|CX542164 s13dNF86A08GS055_467636 Germinating Seed Medicago truncatula cDNA,
mRNA sequence
Length = 564
Score = 48.1 bits (24), Expect = 0.002
Identities = 162/208 (77%)
Strand = Plus / Minus
Query: 466 gcaacaactgatatggctgttgtgctcctttggtacacgtaagagagcgagtgcaccagc 525
||||||||||| || || || |||||||| ||||| || || || || || || || |||
Sbjct: 531 gcaacaactgaaatagcagtcgtgctcctctggtaaacatatgacagggaatgaacaagc 472
Query: 526 tcctgcaggtcatcaggattgaagcctatctcgtcatgcaggatgtgatagtgagttggc 585
||||| || |||||||| |||||| ||||| ||| |||| | || ||||| || |||
Sbjct: 471 tcctgaagttcatcaggggagaagccaatctcatcaagcagcacatggtagtgggtaggc 412
Query: 586 ctggtagtcccaatcattccagcatgtgaacacatgtagaaatcgaagttccttggatga 645
|| | || || ||||| |||||||| | ||| | ||||||||| |||| |||||||||
Sbjct: 411 ctactggtgcctatcatcccagcatgagcacagaggtagaaatcatagtttcttggatga 352
Query: 646 cagactttgttgtcaacaacagtgccag 673
|| | ||| ||||| | |||||| ||||
Sbjct: 351 caaattttattgtcgataacagttccag 324
Score = 42.1 bits (21), Expect = 0.096
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 763 tcatcaagaaatttgcaagcctcaatgat 791
||||||||||| ||||| |||||||||||
Sbjct: 234 tcatcaagaaacttgcatgcctcaatgat 206
>gb|AL389158.1|AL389158 MtBC53B05R1 MtBC Medicago truncatula cDNA clone MtBC53B05 T7, mRNA
sequence
Length = 550
Score = 46.1 bits (23), Expect = 0.006
Identities = 92/115 (80%)
Strand = Plus / Minus
Query: 379 ccatggctagatgaagtctccgacatctcgtcgaactttatgaactgcccaacctgggcg 438
||||||||||||||||| || ||| | || || ||||| |||||||| || || || |
Sbjct: 119 ccatggctagatgaagtttcagacttgtcttcaaacttcatgaactgtcccacttgagaa 60
Query: 439 gctgcaaggtgggcgtagcagatgggagcaacaactgatatggctgttgtgctcc 493
|| || | ||||| |||||||| ||||||||||| || ||||| || |||||||
Sbjct: 59 gcagccaaatgggcatagcagattggagcaacaacagagatggcagtagtgctcc 5
>gb|BF003223.1|BF003223 EST431771 KV1 Medicago truncatula cDNA clone pKV1-3E1, mRNA
sequence
Length = 397
Score = 46.1 bits (23), Expect = 0.006
Identities = 158/203 (77%)
Strand = Plus / Minus
Query: 466 gcaacaactgatatggctgttgtgctcctttggtacacgtaagagagcgagtgcaccagc 525
||||||||||| || || || |||||||| ||||| || || || || || || || |||
Sbjct: 344 gcaacaactgaaatagcagtcgtgctcctctggtaaacatatgacagggaatgaacaagc 285
Query: 526 tcctgcaggtcatcaggattgaagcctatctcgtcatgcaggatgtgatagtgagttggc 585
|| || || |||||||| |||||| ||||| ||| |||| | || ||||| || |||
Sbjct: 284 tcttgaagttcatcaggggagaagccaatctcatcaagcagcacatggtagtgggtaggc 225
Query: 586 ctggtagtcccaatcattccagcatgtgaacacatgtagaaatcgaagttccttggatga 645
|| | || || ||||| |||||||| | ||| | ||||||||| |||| |||||||||
Sbjct: 224 ctactggtgcctatcatcccagcatgagcacagaggtagaaatcatagtttcttggatga 165
Query: 646 cagactttgttgtcaacaacagt 668
|||| ||| ||||| | ||||||
Sbjct: 164 cagattttattgtcgataacagt 142
>gb|BI311950.1|BI311950 EST5313700 GESD Medicago truncatula cDNA clone pGESD16D7 5' end,
mRNA sequence
Length = 592
Score = 44.1 bits (22), Expect = 0.024
Identities = 79/98 (80%)
Strand = Plus / Minus
Query: 570 gtgatagtgagttggcctggtagtcccaatcattccagcatgtgaacacatgtagaaatc 629
|||||| || ||||| ||| | || ||||||||||||||||| | |||||| || |||||
Sbjct: 98 gtgataatgtgttggtctgcttgtaccaatcattccagcatgagcacacatataaaaatc 39
Query: 630 gaagttccttggatgacagactttgttgtcaacaacag 667
| ||||| ||||| || | |||| |||| |||||||
Sbjct: 38 ataattcctaggatggcaaattttgctgtccacaacag 1
>gb|BE202726.1|BE202726 EST402748 KV1 Medicago truncatula cDNA clone pKV1-3C17, mRNA
sequence
Length = 231
Score = 42.1 bits (21), Expect = 0.096
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 763 tcatcaagaaatttgcaagcctcaatgat 791
||||||||||| ||||| |||||||||||
Sbjct: 80 tcatcaagaaacttgcatgcctcaatgat 52
>gb|CG921028.1|CG921028 MBEBT44TF mth2 Medicago truncatula genomic clone 22H16, DNA
sequence
Length = 796
Score = 40.1 bits (20), Expect = 0.38
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 755 tccatttctcatcaagaaat 774
||||||||||||||||||||
Sbjct: 714 tccatttctcatcaagaaat 733
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 231,386
Number of Sequences: 392609
Number of extensions: 231386
Number of successful extensions: 17388
Number of sequences better than 0.5: 34
Number of HSP's better than 0.5 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 17258
Number of HSP's gapped (non-prelim): 113
length of query: 1076
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1056
effective length of database: 433,880,813
effective search space: 458178138528
effective search space used: 458178138528
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)