BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2306445.2.1
(1074 letters)
Database: Mt_nucl_with_EST.fasta
392,609 sequences; 441,732,993 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DW018027.1|DW018027 EST1226988 MTY Medicago truncatula c... 117 2e-024
gb|AW696138.1|AW696138 NF102E04ST1F1034 Developing stem Med... 101 1e-019
gb|BF640149.1|BF640149 NF027D08IN1F1073 Insect herbivory Me... 101 1e-019
gb|BF647604.1|BF647604 NF065E09EC1F1070 Elicited cell cultu... 101 1e-019
gb|BF649437.1|BF649437 NF064F05EC1F1045 Elicited cell cultu... 101 1e-019
gb|BG451115.1|BG451115 NF098E01DT1F1005 Drought Medicago tr... 101 1e-019
gb|BI312197.1|BI312197 EST5313947 GESD Medicago truncatula ... 101 1e-019
gb|AJ500946.1|AJ500946 AJ500946 MTAMP Medicago truncatula c... 101 1e-019
gb|AJ502573.1|AJ502573 AJ502573 MTAMP Medicago truncatula c... 101 1e-019
gb|CB894115.1|CB894115 EST646907 HOGA Medicago truncatula c... 101 1e-019
gb|CX526485.1|CX526485 s13dNF46D03AT030_510714 Aphid-Infect... 101 1e-019
gb|CX534630.1|CX534630 s13dNF74H09MJ080_330958 Methyl Jasmo... 101 1e-019
gb|DW016756.1|DW016756 EST1225717 MTY Medicago truncatula c... 101 1e-019
gb|DW019141.1|DW019141 EST1228102 MTY Medicago truncatula c... 101 1e-019
gb|CX530028.1|CX530028 s13dNF98C06MJ039_246092 Methyl Jasmo... 98 2e-018
gb|BE240329.1|BE240329 EST404378 MHRP- Medicago truncatula ... 96 7e-018
gb|BE240330.1|BE240330 EST404379 MHRP- Medicago truncatula ... 96 7e-018
gb|BG452921.1|BG452921 NF086E11LF1F1084 Developing leaf Med... 96 7e-018
gb|BG645717.1|BG645717 EST507336 KV3 Medicago truncatula cD... 88 2e-015
gb|CX517803.1|CX517803 s13dNF25D05VI046_420275 Virus-Infect... 82 1e-013
gb|BF004832.1|BF004832 EST433330 KV1 Medicago truncatula cD... 80 4e-013
gb|BF633158.1|BF633158 NF053A10DT1F1081 Drought Medicago tr... 80 4e-013
gb|BE248851.2|BE248851 NF023A05DT1F1034 Drought Medicago tr... 80 4e-013
gb|CX528649.1|CX528649 s13dNF05A04MJ021_243370 Methyl Jasmo... 80 4e-013
gb|CX530584.1|CX530584 s13dNF57B11MJ090_247184 Methyl Jasmo... 80 4e-013
gb|BE203294.1|BE203294 EST403316 KV1 Medicago truncatula cD... 70 4e-010
gb|AL366390.1|AL366390 MtBA07D05F1 MtBA Medicago truncatula... 66 7e-009
gb|AL375853.1|AL375853 MtBB19E07F1 MtBB Medicago truncatula... 66 7e-009
gb|BF633549.1|BF633549 NF057G04DT1F1036 Drought Medicago tr... 58 2e-006
gb|BQ154203.1|BQ154203 NF056A09IR1F1068 Irradiated Medicago... 56 6e-006
gb|BQ148696.1|BQ148696 NF080E06FL1F1051 Developing flower M... 54 3e-005
gb|CA858248.1|CA858248 EST635503 GLSD Medicago truncatula c... 54 3e-005
gb|CA858308.1|CA858308 EST635563 GLSD Medicago truncatula c... 54 3e-005
gb|CB894164.1|CB894164 EST646956 HOGA Medicago truncatula c... 54 3e-005
gb|AW560852.1|AW560852 EST315900 DSIR Medicago truncatula c... 46 0.006
gb|AW686606.2|AW686606 NF043C01NR1F1000 Nodulated root Medi... 46 0.006
gb|AW328948.2|AW328948 N200140e rootphos(-) Medicago trunca... 44 0.024
gb|BE239609.1|BE239609 EST403658 MHRP- Medicago truncatula ... 44 0.024
gb|BE203852.1|BE203852 EST396528 KV0 Medicago truncatula cD... 44 0.024
gb|CA922827.1|CA922827 EST640545 MTUS Medicago truncatula c... 44 0.024
>gb|DW018027.1|DW018027 EST1226988 MTY Medicago truncatula cDNA clone MTYB136, mRNA
sequence
Length = 797
Score = 117 bits (59), Expect = 2e-024
Identities = 170/207 (82%)
Strand = Plus / Minus
Query: 502 caaccacatattgctttaagagtttgtcaccaaaagcacgcgaaacagcaagtacaccac 561
|||| ||||| ||||| |||||| | |||||||| ||||| || |||||||| ||||| |
Sbjct: 705 caacaacatactgcttcaagagtctatcaccaaatgcacgagagacagcaagaacacctc 646
Query: 562 caacgcgccatgttcctgcccacatcacaaaacctccagcatcttcaatacgctgccgct 621
|||| | ||| ||||| |||||||| ||||| ||||| ||||||||||| | |||| ||
Sbjct: 645 caactctccaagttccagcccacataacaaagcctcctgcatcttcaatcctttgcctct 586
Query: 622 catcagtttgatcaggcttgtgatcctttgaaacagcaatagcatttccttccctgcata 681
|||||||||| || ||||| ||||| ||||||||||| ||||| || |||||||||
Sbjct: 585 catcagtttggtctggcttatgatctcgagaaacagcaattgcattaccgcccctgcata 526
Query: 682 tgatagccctagagtcaccaacatttg 708
| | ||||| ||||| ||||||||||
Sbjct: 525 taacggccctggagtctccaacatttg 499
Score = 75.8 bits (38), Expect = 7e-012
Identities = 128/158 (81%)
Strand = Plus / Minus
Query: 907 caccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatcaa 966
|||| |||||||||||||| ||||||||||| ||||| || | ||||| |||| ||||
Sbjct: 444 caccgccatgaccatcaaagactccaaaaaggccaacgatttcaccatcgacaccgtcaa 385
Query: 967 tttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagccat 1026
|| | |||||||| || |||||||| || | || || ||||| ||||| ||||| ||||
Sbjct: 384 ttctggtctcataaaaatcttccattgaagatctcttgccaggcgagctagcatacccat 325
Query: 1027 agctaaatctaccattctggctgaggccgccgccgctg 1064
||||||| | ||||| || ||||| ||||| ||||||
Sbjct: 324 agctaaactttccattgtgactgagaccgccaccgctg 287
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 417 gagaccacatcccacagcccatcacttgcaaggataagaaactc 460
||||| |||||||| ||||||||||| || || |||||||||||
Sbjct: 790 gagacgacatcccatagcccatcactggccagaataagaaactc 747
>gb|AW696138.1|AW696138 NF102E04ST1F1034 Developing stem Medicago truncatula cDNA clone
NF102E04ST 5', mRNA sequence
Length = 665
Score = 101 bits (51), Expect = 1e-019
Identities = 123/147 (83%)
Strand = Plus / Minus
Query: 905 agcaccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatc 964
||||||||||||||||||||||||||||||||| ||||| | | ||||| || | ||
Sbjct: 501 agcaccaccatgaccatcaaaaactccaaaaaggccaacaacttcgccattaatgccgtc 442
Query: 965 aatttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagcc 1024
|||| |||||||||| || |||||||| || | || || ||||||||||| ||||| ||
Sbjct: 441 aattcttgtctcataaaaatcttccattgaagatctcttgccaggggagctagcatatcc 382
Query: 1025 atagctaaatctaccattctggctgag 1051
|||||| ||| | ||||||||||||||
Sbjct: 381 atagctgaattttccattctggctgag 355
>gb|BF640149.1|BF640149 NF027D08IN1F1073 Insect herbivory Medicago truncatula cDNA clone
NF027D08IN 5', mRNA sequence
Length = 603
Score = 101 bits (51), Expect = 1e-019
Identities = 123/147 (83%)
Strand = Plus / Minus
Query: 905 agcaccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatc 964
||||||||||||||||||||||||||||||||| ||||| | | ||||| || | ||
Sbjct: 440 agcaccaccatgaccatcaaaaactccaaaaaggccaacaacttcgccattaatgccgtc 381
Query: 965 aatttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagcc 1024
|||| |||||||||| || |||||||| || | || || ||||||||||| ||||| ||
Sbjct: 380 aattcttgtctcataaaaatcttccattgaagatctcttgccaggggagctagcatatcc 321
Query: 1025 atagctaaatctaccattctggctgag 1051
|||||| ||| | ||||||||||||||
Sbjct: 320 atagctgaattttccattctggctgag 294
>gb|BF647604.1|BF647604 NF065E09EC1F1070 Elicited cell culture Medicago truncatula cDNA clone
NF065E09EC 5', mRNA sequence
Length = 653
Score = 101 bits (51), Expect = 1e-019
Identities = 123/147 (83%)
Strand = Plus / Minus
Query: 905 agcaccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatc 964
||||||||||||||||||||||||||||||||| ||||| | | ||||| || | ||
Sbjct: 395 agcaccaccatgaccatcaaaaactccaaaaaggccaacaacttcgccattaatgccgtc 336
Query: 965 aatttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagcc 1024
|||| |||||||||| || |||||||| || | || || ||||||||||| ||||| ||
Sbjct: 335 aattcttgtctcataaaaatcttccattgaagatctcttgccaggggagctagcatatcc 276
Query: 1025 atagctaaatctaccattctggctgag 1051
|||||| ||| | ||||||||||||||
Sbjct: 275 atagctgaattttccattctggctgag 249
>gb|BF649437.1|BF649437 NF064F05EC1F1045 Elicited cell culture Medicago truncatula cDNA clone
NF064F05EC 5', mRNA sequence
Length = 661
Score = 101 bits (51), Expect = 1e-019
Identities = 123/147 (83%)
Strand = Plus / Minus
Query: 905 agcaccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatc 964
||||||||||||||||||||||||||||||||| ||||| | | ||||| || | ||
Sbjct: 422 agcaccaccatgaccatcaaaaactccaaaaaggccaacaacttcgccattaatgccgtc 363
Query: 965 aatttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagcc 1024
|||| |||||||||| || |||||||| || | || || ||||||||||| ||||| ||
Sbjct: 362 aattcttgtctcataaaaatcttccattgaagatctcttgccaggggagctagcatatcc 303
Query: 1025 atagctaaatctaccattctggctgag 1051
|||||| ||| | ||||||||||||||
Sbjct: 302 atagctgaattttccattctggctgag 276
>gb|BG451115.1|BG451115 NF098E01DT1F1005 Drought Medicago truncatula cDNA clone NF098E01DT
5', mRNA sequence
Length = 526
Score = 101 bits (51), Expect = 1e-019
Identities = 123/147 (83%)
Strand = Plus / Minus
Query: 905 agcaccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatc 964
||||||||||||||||||||||||||||||||| ||||| | | ||||| || | ||
Sbjct: 403 agcaccaccatgaccatcaaaaactccaaaaaggccaacaacttcgccattaatgccgtc 344
Query: 965 aatttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagcc 1024
|||| |||||||||| || |||||||| || | || || ||||||||||| ||||| ||
Sbjct: 343 aattcttgtctcataaaaatcttccattgaagatctcttgccaggggagctagcatatcc 284
Query: 1025 atagctaaatctaccattctggctgag 1051
|||||| ||| | ||||||||||||||
Sbjct: 283 atagctgaattttccattctggctgag 257
>gb|BI312197.1|BI312197 EST5313947 GESD Medicago truncatula cDNA clone pGESD17G4 5' end, mRNA
sequence
Length = 659
Score = 101 bits (51), Expect = 1e-019
Identities = 123/147 (83%)
Strand = Plus / Minus
Query: 905 agcaccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatc 964
||||||||||||||||||||||||||||||||| ||||| | | ||||| || | ||
Sbjct: 546 agcaccaccatgaccatcaaaaactccaaaaaggccaacaacttcgccattaatgccgtc 487
Query: 965 aatttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagcc 1024
|||| |||||||||| || |||||||| || | || || ||||||||||| ||||| ||
Sbjct: 486 aattcttgtctcataaaaatcttccattgaagatctcttgccaggggagctagcatatcc 427
Query: 1025 atagctaaatctaccattctggctgag 1051
|||||| ||| | ||||||||||||||
Sbjct: 426 atagctgaattttccattctggctgag 400
>gb|AJ500946.1|AJ500946 AJ500946 MTAMP Medicago truncatula cDNA clone mtgmadc120001a03, mRNA
sequence
Length = 715
Score = 101 bits (51), Expect = 1e-019
Identities = 123/147 (83%)
Strand = Plus / Minus
Query: 905 agcaccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatc 964
||||||||||||||||||||||||||||||||| ||||| | | ||||| || | ||
Sbjct: 499 agcaccaccatgaccatcaaaaactccaaaaaggccaacaacttcgccattaatgccgtc 440
Query: 965 aatttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagcc 1024
|||| |||||||||| || |||||||| || | || || ||||||||||| ||||| ||
Sbjct: 439 aattcttgtctcataaaaatcttccattgaagatctcttgccaggggagctagcatatcc 380
Query: 1025 atagctaaatctaccattctggctgag 1051
|||||| ||| | ||||||||||||||
Sbjct: 379 atagctgaattttccattctggctgag 353
>gb|AJ502573.1|AJ502573 AJ502573 MTAMP Medicago truncatula cDNA clone mtgmadc120022f07, mRNA
sequence
Length = 559
Score = 101 bits (51), Expect = 1e-019
Identities = 123/147 (83%)
Strand = Plus / Minus
Query: 905 agcaccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatc 964
||||||||||||||||||||||||||||||||| ||||| | | ||||| || | ||
Sbjct: 480 agcaccaccatgaccatcaaaaactccaaaaaggccaacaacttcgccattaatgccgtc 421
Query: 965 aatttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagcc 1024
|||| |||||||||| || |||||||| || | || || ||||||||||| ||||| ||
Sbjct: 420 aattcttgtctcataaaaatcttccattgaagatctcttgccaggggagctagcatatcc 361
Query: 1025 atagctaaatctaccattctggctgag 1051
|||||| ||| | ||||||||||||||
Sbjct: 360 atagctgaattttccattctggctgag 334
>gb|CB894115.1|CB894115 EST646907 HOGA Medicago truncatula cDNA clone HOGA-30I7, mRNA
sequence
Length = 763
Score = 101 bits (51), Expect = 1e-019
Identities = 123/147 (83%)
Strand = Plus / Minus
Query: 905 agcaccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatc 964
||||||||||||||||||||||||||||||||| ||||| | | ||||| || | ||
Sbjct: 329 agcaccaccatgaccatcaaaaactccaaaaaggccaacaacttcgccattaatgccgtc 270
Query: 965 aatttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagcc 1024
|||| |||||||||| || |||||||| || | || || ||||||||||| ||||| ||
Sbjct: 269 aattcttgtctcataaaaatcttccattgaagatctcttgccaggggagctagcatatcc 210
Query: 1025 atagctaaatctaccattctggctgag 1051
|||||| ||| | ||||||||||||||
Sbjct: 209 atagctgaattttccattctggctgag 183
Score = 95.6 bits (48), Expect = 7e-018
Identities = 213/268 (79%)
Strand = Plus / Minus
Query: 487 ggatctccggatccacaaccacatattgctttaagagtttgtcaccaaaagcacgcgaaa 546
|||| |||||||| |||| || |||||||| | |||| | |||||||| ||||| ||||
Sbjct: 750 ggatttccggatcagcaacaacgtattgcttaaggagtctatcaccaaatgcacgagaaa 691
Query: 547 cagcaagtacaccaccaacgcgccatgttcctgcccacatcacaaaacctccagcatctt 606
||||||| |||||||| || | ||| ||||| |||||||| ||||| ||||| |||||||
Sbjct: 690 cagcaagaacaccaccgactctccaagttccagcccacataacaaagcctcccgcatctt 631
Query: 607 caatacgctgccgctcatcagtttgatcaggcttgtgatcctttgaaacagcaatagcat 666
| || | |||| ||| || ||||| || || ||||| || || |||||||| ||||
Sbjct: 630 ctatcctttgcctctcgtcggtttggtctggtttgtggtctcgggacacagcaatggcat 571
Query: 667 ttccttccctgcatatgatagccctagagtcaccaacatttgcgacgaagagacgatcac 726
|||| |||||||||| | ||| || ||||| ||||||||||| || | | ||| ||||
Sbjct: 570 ttccacccctgcatataacagctctggagtccccaacatttgcaacaagcaaacggtcac 511
Query: 727 caacaagtacagcagttgatgcagttga 754
||||||| | ||||| || ||||||||
Sbjct: 510 caacaagaatggcagtggaagcagttga 483
>gb|CX526485.1|CX526485 s13dNF46D03AT030_510714 Aphid-Infected Shoots Medicago truncatula
cDNA, mRNA sequence
Length = 622
Score = 101 bits (51), Expect = 1e-019
Identities = 123/147 (83%)
Strand = Plus / Minus
Query: 905 agcaccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatc 964
||||||||||||||||||||||||||||||||| ||||| | | ||||| || | ||
Sbjct: 446 agcaccaccatgaccatcaaaaactccaaaaaggccaacaacttcgccattaatgccgtc 387
Query: 965 aatttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagcc 1024
|||| |||||||||| || |||||||| || | || || ||||||||||| ||||| ||
Sbjct: 386 aattcttgtctcataaaaatcttccattgaagatctcttgccaggggagctagcatatcc 327
Query: 1025 atagctaaatctaccattctggctgag 1051
|||||| ||| | ||||||||||||||
Sbjct: 326 atagctgaattttccattctggctgag 300
>gb|CX534630.1|CX534630 s13dNF74H09MJ080_330958 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 692
Score = 101 bits (51), Expect = 1e-019
Identities = 123/147 (83%)
Strand = Plus / Minus
Query: 905 agcaccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatc 964
||||||||||||||||||||||||||||||||| ||||| | | ||||| || | ||
Sbjct: 500 agcaccaccatgaccatcaaaaactccaaaaaggccaacaacttcgccattaatgccgtc 441
Query: 965 aatttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagcc 1024
|||| |||||||||| || |||||||| || | || || ||||||||||| ||||| ||
Sbjct: 440 aattcttgtctcataaaaatcttccattgaagatctcttgccaggggagctagcatatcc 381
Query: 1025 atagctaaatctaccattctggctgag 1051
|||||| ||| | ||||||||||||||
Sbjct: 380 atagctgaattttccattctggctgag 354
>gb|DW016756.1|DW016756 EST1225717 MTY Medicago truncatula cDNA clone MTYAL22, mRNA sequence
Length = 667
Score = 101 bits (51), Expect = 1e-019
Identities = 123/147 (83%)
Strand = Plus / Minus
Query: 905 agcaccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatc 964
||||||||||||||||||||||||||||||||| ||||| | | ||||| || | ||
Sbjct: 417 agcaccaccatgaccatcaaaaactccaaaaaggccaacaacttcgccattaatgccgtc 358
Query: 965 aatttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagcc 1024
|||| |||||||||| || |||||||| || | || || ||||||||||| ||||| ||
Sbjct: 357 aattcttgtctcataaaaatcttccattgaagatctcttgccaggggagctagcatatcc 298
Query: 1025 atagctaaatctaccattctggctgag 1051
|||||| ||| | ||||||||||||||
Sbjct: 297 atagctgaattttccattctggctgag 271
Score = 42.1 bits (21), Expect = 0.096
Identities = 78/97 (80%)
Strand = Plus / Minus
Query: 658 caatagcatttccttccctgcatatgatagccctagagtcaccaacatttgcgacgaaga 717
|||| |||||||| |||||||||| | ||| || ||||| ||||||||||| || | |
Sbjct: 667 caatggcatttccacccctgcatataacagctctggagtccccaacatttgcaacaagca 608
Query: 718 gacgatcaccaacaagtacagcagttgatgcagttga 754
||| ||||||||||| | ||||| || ||||||||
Sbjct: 607 aacggtcaccaacaagaatggcagtggaagcagttga 571
>gb|DW019141.1|DW019141 EST1228102 MTY Medicago truncatula cDNA clone MTYBF38, mRNA sequence
Length = 884
Score = 101 bits (51), Expect = 1e-019
Identities = 123/147 (83%)
Strand = Plus / Minus
Query: 905 agcaccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatc 964
||||||||||||||||||||||||||||||||| ||||| | | ||||| || | ||
Sbjct: 222 agcaccaccatgaccatcaaaaactccaaaaaggccaacaacttcgccattaatgccgtc 163
Query: 965 aatttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagcc 1024
|||| |||||||||| || |||||||| || | || || ||||||||||| ||||| ||
Sbjct: 162 aattcttgtctcataaaaatcttccattgaagatctcttgccaggggagctagcatatcc 103
Query: 1025 atagctaaatctaccattctggctgag 1051
|||||| ||| | ||||||||||||||
Sbjct: 102 atagctgaattttccattctggctgag 76
Score = 50.1 bits (25), Expect = 4e-004
Identities = 82/101 (81%)
Strand = Plus / Minus
Query: 654 acagcaatagcatttccttccctgcatatgatagccctagagtcaccaacatttgcgacg 713
|||||||| |||||||| |||||||||| | ||| || ||||| ||||||||||| ||
Sbjct: 476 acagcaatggcatttccacccctgcatataacagctctggagtccccaacatttgcaaca 417
Query: 714 aagagacgatcaccaacaagtacagcagttgatgcagttga 754
| | ||| ||||||||||| | ||||| || ||||||||
Sbjct: 416 agcaaacggtcaccaacaagaatggcagtggaagcagttga 376
Score = 42.1 bits (21), Expect = 0.096
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 402 acagcttcctcgttagagaccacatcccacagcccatcact 442
||||||||||| || ||||| |||||||| || ||||||||
Sbjct: 646 acagcttcctcatttgagacaacatcccatagtccatcact 606
>gb|CX530028.1|CX530028 s13dNF98C06MJ039_246092 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 562
Score = 97.6 bits (49), Expect = 2e-018
Identities = 121/145 (83%)
Strand = Plus / Minus
Query: 907 caccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatcaa 966
||||||||||||||||||||||||||||||| ||||| | | ||||| || | ||||
Sbjct: 562 caccaccatgaccatcaaaaactccaaaaaggccaacaacttcgccattaatgccgtcaa 503
Query: 967 tttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagccat 1026
|| |||||||||| || |||||||| || | || || ||||||||||| ||||| ||||
Sbjct: 502 ttcttgtctcataaaaatcttccattgaagatctcttgccaggggagctagcatatccat 443
Query: 1027 agctaaatctaccattctggctgag 1051
|||| ||| | ||||||||||||||
Sbjct: 442 agctgaattttccattctggctgag 418
>gb|BE240329.1|BE240329 EST404378 MHRP- Medicago truncatula cDNA clone pMHRP-43J23, mRNA
sequence
Length = 554
Score = 95.6 bits (48), Expect = 7e-018
Identities = 213/268 (79%)
Strand = Plus / Minus
Query: 487 ggatctccggatccacaaccacatattgctttaagagtttgtcaccaaaagcacgcgaaa 546
|||| |||||||| |||| || |||||||| | |||| | |||||||| ||||| ||||
Sbjct: 406 ggatttccggatcagcaacaacgtattgcttaaggagtctatcaccaaatgcacgagaaa 347
Query: 547 cagcaagtacaccaccaacgcgccatgttcctgcccacatcacaaaacctccagcatctt 606
||||||| |||||||| || | ||| ||||| |||||||| ||||| ||||| |||||||
Sbjct: 346 cagcaagaacaccaccgactctccaagttccagcccacataacaaagcctcccgcatctt 287
Query: 607 caatacgctgccgctcatcagtttgatcaggcttgtgatcctttgaaacagcaatagcat 666
| || | |||| ||| || ||||| || || ||||| || || |||||||| ||||
Sbjct: 286 ctatcctttgcctctcgtcggtttggtctggtttgtggtctcgggacacagcaatggcat 227
Query: 667 ttccttccctgcatatgatagccctagagtcaccaacatttgcgacgaagagacgatcac 726
|||| |||||||||| | ||| || ||||| ||||||||||| || | | ||| ||||
Sbjct: 226 ttccacccctgcatataacagctctggagtccccaacatttgcaacaagcaaacggtcac 167
Query: 727 caacaagtacagcagttgatgcagttga 754
||||||| | ||||| || ||||||||
Sbjct: 166 caacaagaatggcagtggaagcagttga 139
>gb|BE240330.1|BE240330 EST404379 MHRP- Medicago truncatula cDNA clone pMHRP-43J23, mRNA
sequence
Length = 378
Score = 95.6 bits (48), Expect = 7e-018
Identities = 213/268 (79%)
Strand = Plus / Minus
Query: 487 ggatctccggatccacaaccacatattgctttaagagtttgtcaccaaaagcacgcgaaa 546
|||| |||||||| |||| || |||||||| | |||| | |||||||| ||||| ||||
Sbjct: 310 ggatttccggatcagcaacaacgtattgcttaaggagtctatcaccaaatgcacgagaaa 251
Query: 547 cagcaagtacaccaccaacgcgccatgttcctgcccacatcacaaaacctccagcatctt 606
||||||| |||||||| || | ||| ||||| |||||||| ||||| ||||| |||||||
Sbjct: 250 cagcaagaacaccaccgactctccaagttccagcccacataacaaagcctcccgcatctt 191
Query: 607 caatacgctgccgctcatcagtttgatcaggcttgtgatcctttgaaacagcaatagcat 666
| || | |||| ||| || ||||| || || ||||| || || |||||||| ||||
Sbjct: 190 ctatcctttgcctctcgtcggtttggtctggtttgtggtctcgggacacagcaatggcat 131
Query: 667 ttccttccctgcatatgatagccctagagtcaccaacatttgcgacgaagagacgatcac 726
|||| |||||||||| | ||| || ||||| ||||||||||| || | | ||| ||||
Sbjct: 130 ttccacccctgcatataacagctctggagtccccaacatttgcaacaagcaaacggtcac 71
Query: 727 caacaagtacagcagttgatgcagttga 754
||||||| | ||||| || ||||||||
Sbjct: 70 caacaagaatggcagtggaagcagttga 43
>gb|BG452921.1|BG452921 NF086E11LF1F1084 Developing leaf Medicago truncatula cDNA clone
NF086E11LF 5', mRNA sequence
Length = 683
Score = 95.6 bits (48), Expect = 7e-018
Identities = 213/268 (79%)
Strand = Plus / Minus
Query: 487 ggatctccggatccacaaccacatattgctttaagagtttgtcaccaaaagcacgcgaaa 546
|||| |||||||| |||| || |||||||| | |||| | |||||||| ||||| ||||
Sbjct: 339 ggatttccggatcagcaacaacgtattgcttaaggagtctatcaccaaatgcacgagaaa 280
Query: 547 cagcaagtacaccaccaacgcgccatgttcctgcccacatcacaaaacctccagcatctt 606
||||||| |||||||| || | ||| ||||| |||||||| ||||| ||||| |||||||
Sbjct: 279 cagcaagaacaccaccgactctccaagttccagcccacataacaaagcctcccgcatctt 220
Query: 607 caatacgctgccgctcatcagtttgatcaggcttgtgatcctttgaaacagcaatagcat 666
| || | |||| ||| || ||||| || || ||||| || || |||||||| ||||
Sbjct: 219 ctatcctttgcctctcgtcggtttggtctggtttgtggtctcgggacacagcaatggcat 160
Query: 667 ttccttccctgcatatgatagccctagagtcaccaacatttgcgacgaagagacgatcac 726
|||| |||||||||| | ||| || ||||| ||||||||||| || | | ||| ||||
Sbjct: 159 ttccacccctgcatataacagctctggagtccccaacatttgcaacaagcaaacggtcac 100
Query: 727 caacaagtacagcagttgatgcagttga 754
||||||| | ||||| || ||||||||
Sbjct: 99 caacaagaatggcagtggaagcagttga 72
>gb|BG645717.1|BG645717 EST507336 KV3 Medicago truncatula cDNA clone pKV3-47I21 5' end, mRNA
sequence
Length = 725
Score = 87.7 bits (44), Expect = 2e-015
Identities = 123/148 (83%), Gaps = 1/148 (0%)
Strand = Plus / Minus
Query: 905 agcaccaccatgaccatcaaaaactccaaaaagaccaacta-tctggccatcaacacaat 963
||||||||||||||||||||||||||||||||| ||||| | | | |||| || | |
Sbjct: 451 agcaccaccatgaccatcaaaaactccaaaaaggccaacaacttcgcccattaatgccgt 392
Query: 964 caatttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagc 1023
||||| |||||||||| || |||||||| || | || || ||||||||||| ||||| |
Sbjct: 391 caattcttgtctcataaaaatcttccattgaagatctcttgccaggggagctagcatatc 332
Query: 1024 catagctaaatctaccattctggctgag 1051
||||||| ||| | ||||||||||||||
Sbjct: 331 catagctgaattttccattctggctgag 304
>gb|CX517803.1|CX517803 s13dNF25D05VI046_420275 Virus-Infected Leaves Medicago truncatula
cDNA, mRNA sequence
Length = 585
Score = 81.8 bits (41), Expect = 1e-013
Identities = 101/121 (83%)
Strand = Plus / Minus
Query: 487 ggatctccggatccacaaccacatattgctttaagagtttgtcaccaaaagcacgcgaaa 546
|||| |||||||| |||| || |||||||| | |||| | |||||||| ||||| ||||
Sbjct: 174 ggatttccggatcagcaacaacgtattgcttaaggagtctatcaccaaatgcacgagaaa 115
Query: 547 cagcaagtacaccaccaacgcgccatgttcctgcccacatcacaaaacctccagcatctt 606
||||||| |||||||| || | ||| ||||| |||||||| ||||| ||||| |||||||
Sbjct: 114 cagcaagaacaccaccgactctccaagttccagcccacataacaaagcctcccgcatctt 55
Query: 607 c 607
|
Sbjct: 54 c 54
>gb|BF004832.1|BF004832 EST433330 KV1 Medicago truncatula cDNA clone pKV1-18H18, mRNA
sequence
Length = 476
Score = 79.8 bits (40), Expect = 4e-013
Identities = 130/160 (81%)
Strand = Plus / Minus
Query: 907 caccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatcaa 966
|||| |||||||||||||| ||||||||||| ||||| || | ||||| |||| ||||
Sbjct: 274 caccgccatgaccatcaaagactccaaaaaggccaacgatttcaccatcgacaccgtcaa 215
Query: 967 tttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagccat 1026
|| | |||||||| || |||||||| || | || || ||||| ||||| ||||| ||||
Sbjct: 214 ttctggtctcataaaaatcttccattgaagatctcttgccaggcgagctagcatacccat 155
Query: 1027 agctaaatctaccattctggctgaggccgccgccgctgac 1066
||||||| | ||||| || ||||| ||||| ||||||||
Sbjct: 154 agctaaactttccattgtgactgagaccgccaccgctgac 115
>gb|BF633158.1|BF633158 NF053A10DT1F1081 Drought Medicago truncatula cDNA clone NF053A10DT
5', mRNA sequence
Length = 585
Score = 79.8 bits (40), Expect = 4e-013
Identities = 124/152 (81%)
Strand = Plus / Minus
Query: 579 gcccacatcacaaaacctccagcatcttcaatacgctgccgctcatcagtttgatcaggc 638
|||||||| ||||| ||||| ||||||||||| | |||| |||||||||||| || |||
Sbjct: 520 gcccacataacaaagcctcctgcatcttcaatcctttgcctctcatcagtttggtctggc 461
Query: 639 ttgtgatcctttgaaacagcaatagcatttccttccctgcatatgatagccctagagtca 698
|| ||||| ||||||||||| ||||| || |||||||||| | ||||| |||||
Sbjct: 460 ttatgatctcgagaaacagcaattgcattaccgcccctgcatataacggccctggagtct 401
Query: 699 ccaacatttgcgacgaagagacgatcaccaac 730
||||||||||| || | | ||||||||||||
Sbjct: 400 ccaacatttgcaacaagcaaacgatcaccaac 369
>gb|BE248851.2|BE248851 NF023A05DT1F1034 Drought Medicago truncatula cDNA clone NF023A05DT
5', mRNA sequence
Length = 613
Score = 79.8 bits (40), Expect = 4e-013
Identities = 130/160 (81%)
Strand = Plus / Minus
Query: 907 caccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatcaa 966
|||| |||||||||||||| ||||||||||| ||||| || | ||||| |||| ||||
Sbjct: 349 caccgccatgaccatcaaagactccaaaaaggccaacgatttcaccatcgacaccgtcaa 290
Query: 967 tttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagccat 1026
|| | |||||||| || |||||||| || | || || ||||| ||||| ||||| ||||
Sbjct: 289 ttctggtctcataaaaatcttccattgaagatctcttgccaggcgagctagcatacccat 230
Query: 1027 agctaaatctaccattctggctgaggccgccgccgctgac 1066
||||||| | ||||| || ||||| ||||| ||||||||
Sbjct: 229 agctaaactttccattgtgactgagaccgccaccgctgac 190
>gb|CX528649.1|CX528649 s13dNF05A04MJ021_243370 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 618
Score = 79.8 bits (40), Expect = 4e-013
Identities = 130/160 (81%)
Strand = Plus / Minus
Query: 907 caccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatcaa 966
|||| |||||||||||||| ||||||||||| ||||| || | ||||| |||| ||||
Sbjct: 360 caccgccatgaccatcaaagactccaaaaaggccaacgatttcaccatcgacaccgtcaa 301
Query: 967 tttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagccat 1026
|| | |||||||| || |||||||| || | || || ||||| ||||| ||||| ||||
Sbjct: 300 ttctggtctcataaaaatcttccattgaagatctcttgccaggcgagctagcatacccat 241
Query: 1027 agctaaatctaccattctggctgaggccgccgccgctgac 1066
||||||| | ||||| || ||||| ||||| ||||||||
Sbjct: 240 agctaaactttccattgtgactgagaccgccaccgctgac 201
Score = 46.1 bits (23), Expect = 0.006
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 652 aaacagcaatagcatttccttccctgcatatgatagccctagagtcaccaacatttgcga 711
|||||||||| ||||| || |||||||||| | ||||| ||||| ||||||||||| |
Sbjct: 618 aaacagcaattgcattaccgcccctgcatataacggccctggagtctccaacatttgcaa 559
Query: 712 cgaagagacgatcaccaac 730
| | | ||||||||||||
Sbjct: 558 caagcaaacgatcaccaac 540
>gb|CX530584.1|CX530584 s13dNF57B11MJ090_247184 Methyl Jasmonate-Elicited Root Cell
Suspension Culture Medicago truncatula cDNA, mRNA
sequence
Length = 600
Score = 79.8 bits (40), Expect = 4e-013
Identities = 130/160 (81%)
Strand = Plus / Minus
Query: 907 caccaccatgaccatcaaaaactccaaaaagaccaactatctggccatcaacacaatcaa 966
|||| |||||||||||||| ||||||||||| ||||| || | ||||| |||| ||||
Sbjct: 353 caccgccatgaccatcaaagactccaaaaaggccaacgatttcaccatcgacaccgtcaa 294
Query: 967 tttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatagccat 1026
|| | |||||||| || |||||||| || | || || ||||| ||||| ||||| ||||
Sbjct: 293 ttctggtctcataaaaatcttccattgaagatctcttgccaggcgagctagcatacccat 234
Query: 1027 agctaaatctaccattctggctgaggccgccgccgctgac 1066
||||||| | ||||| || ||||| ||||| ||||||||
Sbjct: 233 agctaaactttccattgtgactgagaccgccaccgctgac 194
>gb|BE203294.1|BE203294 EST403316 KV1 Medicago truncatula cDNA clone pKV1-5G11, mRNA
sequence
Length = 254
Score = 69.9 bits (35), Expect = 4e-010
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 905 agcaccaccatgaccatcaaaaactccaaaaagaccaac 943
||||||||||||||||||||||||||||||||| |||||
Sbjct: 69 agcaccaccatgaccatcaaaaactccaaaaaggccaac 31
>gb|AL366390.1|AL366390 MtBA07D05F1 MtBA Medicago truncatula cDNA clone MtBA07D05 T3, mRNA
sequence
Length = 470
Score = 65.9 bits (33), Expect = 7e-009
Identities = 75/89 (84%)
Strand = Plus / Minus
Query: 963 tcaatttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatag 1022
|||||| |||||||||| || |||||||| || | || || ||||||||||| |||||
Sbjct: 439 tcaattcttgtctcataaaaatcttccattgaagatctcttgccaggggagctagcatat 380
Query: 1023 ccatagctaaatctaccattctggctgag 1051
|||||||| ||| | ||||||||||||||
Sbjct: 379 ccatagctgaattttccattctggctgag 351
>gb|AL375853.1|AL375853 MtBB19E07F1 MtBB Medicago truncatula cDNA clone MtBB19E07 T3, mRNA
sequence
Length = 497
Score = 65.9 bits (33), Expect = 7e-009
Identities = 75/89 (84%)
Strand = Plus / Minus
Query: 963 tcaatttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatag 1022
|||||| |||||||||| || |||||||| || | || || ||||||||||| |||||
Sbjct: 469 tcaattcttgtctcataaaaatcttccattgaagatctcttgccaggggagctagcatat 410
Query: 1023 ccatagctaaatctaccattctggctgag 1051
|||||||| ||| | ||||||||||||||
Sbjct: 409 ccatagctgaattttccattctggctgag 381
>gb|BF633549.1|BF633549 NF057G04DT1F1036 Drought Medicago truncatula cDNA clone NF057G04DT
5', mRNA sequence
Length = 491
Score = 58.0 bits (29), Expect = 2e-006
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 963 tcaatttttgtctcatagaagtcttccatggatgcccttttaccaggggagcttgcatag 1022
|||||| |||||||||| || |||||||| || | || || ||||||||||| |||||
Sbjct: 447 tcaattcttgtctcataaaaatcttccattgaagatctcttgccaggggagctagcatat 388
Query: 1023 ccatagctaaatctaccattctggctgag 1051
|||||||| ||| | ||||||||| ||||
Sbjct: 387 ccatagctgaattttccattctgggtgag 359
>gb|BQ154203.1|BQ154203 NF056A09IR1F1068 Irradiated Medicago truncatula cDNA clone
NF056A09IR 5', mRNA sequence
Length = 680
Score = 56.0 bits (28), Expect = 6e-006
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 487 ggatctccggatccacaaccacatattgctttaagagtttgtcaccaaaagcacgcgaaa 546
|||| |||||||| |||| || |||||||| | |||| | |||||||| ||||| ||||
Sbjct: 91 ggatttccggatcagcaacaacgtattgcttaaggagtctatcaccaaatgcacgagaaa 32
Query: 547 cagcaagtacaccacc 562
||||||| ||||||||
Sbjct: 31 cagcaagaacaccacc 16
>gb|BQ148696.1|BQ148696 NF080E06FL1F1051 Developing flower Medicago truncatula cDNA clone
NF080E06FL 5', mRNA sequence
Length = 608
Score = 54.0 bits (27), Expect = 3e-005
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 525 ttgtcaccaaaagcacgcgaaacagcaagtacaccaccaacgcgccatgttcctgccca 583
||||| ||||| ||||| ||||||||||| | ||| ||||| | |||||||||||||||
Sbjct: 229 ttgtctccaaatgcacgggaaacagcaagaataccgccaaccctccatgttcctgccca 171
>gb|CA858248.1|CA858248 EST635503 GLSD Medicago truncatula cDNA clone pGLSD-27M12, mRNA
sequence
Length = 691
Score = 54.0 bits (27), Expect = 3e-005
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 525 ttgtcaccaaaagcacgcgaaacagcaagtacaccaccaacgcgccatgttcctgccca 583
||||| ||||| ||||| ||||||||||| | ||| ||||| | |||||||||||||||
Sbjct: 565 ttgtctccaaatgcacgggaaacagcaagaataccgccaaccctccatgttcctgccca 507
Score = 46.1 bits (23), Expect = 0.006
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 912 ccatgaccatcaaaaactccaaaaagaccaactatctggccatcaac 958
||||| ||||||||||| ||||||| ||||| ||||| ||||||||
Sbjct: 184 ccatggccatcaaaaacaccaaaaaagccaaccatctgaccatcaac 138
>gb|CA858308.1|CA858308 EST635563 GLSD Medicago truncatula cDNA clone pGLSD-27J11, mRNA
sequence
Length = 601
Score = 54.0 bits (27), Expect = 3e-005
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 525 ttgtcaccaaaagcacgcgaaacagcaagtacaccaccaacgcgccatgttcctgccca 583
||||| ||||| ||||| ||||||||||| | ||| ||||| | |||||||||||||||
Sbjct: 564 ttgtctccaaatgcacgggaaacagcaagaataccgccaaccctccatgttcctgccca 506
Score = 46.1 bits (23), Expect = 0.006
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 912 ccatgaccatcaaaaactccaaaaagaccaactatctggccatcaac 958
||||| ||||||||||| ||||||| ||||| ||||| ||||||||
Sbjct: 183 ccatggccatcaaaaacaccaaaaaagccaaccatctgaccatcaac 137
>gb|CB894164.1|CB894164 EST646956 HOGA Medicago truncatula cDNA clone HOGA-30E8, mRNA
sequence
Length = 666
Score = 54.0 bits (27), Expect = 3e-005
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 525 ttgtcaccaaaagcacgcgaaacagcaagtacaccaccaacgcgccatgttcctgccca 583
||||| ||||| ||||| ||||||||||| | ||| ||||| | |||||||||||||||
Sbjct: 501 ttgtctccaaatgcacgggaaacagcaagaataccgccaaccctccatgttcctgccca 443
Score = 46.1 bits (23), Expect = 0.006
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 912 ccatgaccatcaaaaactccaaaaagaccaactatctggccatcaac 958
||||| ||||||||||| ||||||| ||||| ||||| ||||||||
Sbjct: 120 ccatggccatcaaaaacaccaaaaaagccaaccatctgaccatcaac 74
>gb|AW560852.1|AW560852 EST315900 DSIR Medicago truncatula cDNA clone pDSIR-30K21, mRNA
sequence
Length = 286
Score = 46.1 bits (23), Expect = 0.006
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 912 ccatgaccatcaaaaactccaaaaagaccaactatctggccatcaac 958
||||| ||||||||||| ||||||| ||||| ||||| ||||||||
Sbjct: 213 ccatggccatcaaaaacaccaaaaaagccaaccatctgaccatcaac 167
>gb|AW686606.2|AW686606 NF043C01NR1F1000 Nodulated root Medicago truncatula cDNA clone
NF043C01NR 5', mRNA sequence
Length = 523
Score = 46.1 bits (23), Expect = 0.006
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 912 ccatgaccatcaaaaactccaaaaagaccaactatctggccatcaac 958
||||| ||||||||||| ||||||| ||||| ||||| ||||||||
Sbjct: 362 ccatggccatcaaaaacaccaaaaaagccaaccatctgaccatcaac 316
>gb|AW328948.2|AW328948 N200140e rootphos(-) Medicago truncatula cDNA clone MHRP-14E7, mRNA
sequence
Length = 468
Score = 44.1 bits (22), Expect = 0.024
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 423 acatcccacagcccatcacttgcaag 448
|||||||||| |||||||||||||||
Sbjct: 362 acatcccacaccccatcacttgcaag 337
>gb|BE239609.1|BE239609 EST403658 MHRP- Medicago truncatula cDNA clone pMHRP-28B16, mRNA
sequence
Length = 737
Score = 44.1 bits (22), Expect = 0.024
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 423 acatcccacagcccatcacttgcaag 448
|||||||||| |||||||||||||||
Sbjct: 366 acatcccacaccccatcacttgcaag 341
>gb|BE203852.1|BE203852 EST396528 KV0 Medicago truncatula cDNA clone pKV0-13A11, mRNA
sequence
Length = 654
Score = 44.1 bits (22), Expect = 0.024
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 423 acatcccacagcccatcacttgcaag 448
|||||||||| |||||||||||||||
Sbjct: 335 acatcccacaccccatcacttgcaag 310
>gb|CA922827.1|CA922827 EST640545 MTUS Medicago truncatula cDNA clone MTUS-58H5, mRNA
sequence
Length = 791
Score = 44.1 bits (22), Expect = 0.024
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 423 acatcccacagcccatcacttgcaag 448
|||||||||| |||||||||||||||
Sbjct: 417 acatcccacaccccatcacttgcaag 442
Database: Mt_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:25 PM
Number of letters in database: 441,732,993
Number of sequences in database: 392,609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 277,343
Number of Sequences: 392609
Number of extensions: 277343
Number of successful extensions: 20130
Number of sequences better than 0.5: 40
Number of HSP's better than 0.5 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20035
Number of HSP's gapped (non-prelim): 93
length of query: 1074
length of database: 441,732,993
effective HSP length: 20
effective length of query: 1054
effective length of database: 433,880,813
effective search space: 457310376902
effective search space used: 457310376902
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)